These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9275#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1830 fasta sequence [TAGGTAGTAGAGGTACGGTATACCTCCGTATATGTACGATCGAAATCCATCAGTAAACCTAACGTCCTGTGAATTACCTTTAGCACTTTTAATGAATTCCACCAGCCATACAGCAAGATACGAACGATCGTTACTATCATCTTTCTGTTGTTGTTTGCGTTGGTTGTGCTTCCGTTCCCAACGCTCCCCCACTGCCACAATCGGGTCTGTGGGTTTTATTGCCCAGAATTTCCCCTGCTGTTTACCAAACGAACAGGTTTTTTTTTCTACACACCCAGACATTCGTGCGAGGGGTAAGTGAGTTGTTGTGCGATGCGCGCGCTGCATTCTGTATTAAGACGC--GAGCGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG-TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG-AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC-GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCGGTCGGGTACCACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGGACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGCCGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATCGGGGCCGGCGATCCGGGCCCGTACAGCAACGAGCCGGGCTATCTCGGCTACTGCGAGTTCTGCCACAATCTGACCAGCGACGAGTGGACGAAGAAGTGGGACGATGTGGGCCTGTGCCCGTACGCGTACACCGAGACGACCTGGATCGGGTACGAGAACGAGCGGTCGCTGCAGGAAAAGATCAACTACGTGAAGCAGAAGCGGCTGGGCGGGCTGTACGCGTTCTCGCTCGATCTGGACGACTATAGGGGGGCATGCGGGGAACCGTTCCCGCTGACCCGCTTCCTATCGCGCTATCACGACGAAACGAAGATCAAAGATTGGCACATTTTCATCTCGACCACGGAGCGGAAGGAGATCAATACGACGGAAGCCGAATCGTAACAATCGTGGGCAACATCACTAAGCTTAACACACGCATTGTGTAATGTATTTTATAATAC-AAAAATAAAGGCAAATTGCAACCC] [+] EMBL BX603939 [TAGGTAGTAGAGGTACGGTATACCTCCGTATATGTACGATCGAAATCCATCAGTAAACCTAACGTCCTGTGAATTACCTTTAGCACTTTTAATGAATTCCACCAGCCATACAGCAAGATACGAACGATCGTTACTATCATCTTTCTGTTGTTGTTTGCGTTGGTTGTGCTTCCGTTCCCAACGCTCCCCCACTGCCACAATCGGGTCTGTGGGTTTTATTGCCCAGAATTTCCCCTGCTGTTTACCAAACGAACAGGTTTTTTTTTCTACACACCCAGACATTCGTGCGAGGGGTAAGTGAGTTGTTGTGCGATGCGCGCGCTGCATTCTGTATTAAGACGC GAGCGCGACAACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTTCTGTGCTGGAATTGAAGCT ] [+] EMBL BX602579 [ CGCGCTGCATTCTGTATTAAGACGC GAGCGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAAGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCGGTCGG ] [+] EMBL BM612190 [ ccgcgGACGCGTGGGCGCGACAACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTG TTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGCGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTCGACGGCATCGAAGCTGGTGTGGCTCTATCCGGGCAACTTTGATCGGGGGCGGCGCTGTGGA ] [+] EMBL CNS09RGV [ CGC GAGCGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGATATCTCGCGCATGGCGGTCGGGTACCACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGGACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGCCGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATC ] [+] EMBL CNS08UU1 [ AGCGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCGGTCGGGTA CACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGAAGGACT ] [+] EMBL CNS094RK [ CGCGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCGGTCGGGTACCACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGGACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGG ] [+] EMBL BX604304 [ CGACAACACACATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAATGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCA ] [+] EMBL BX607046 [ cgCATCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATA ] [+] EMBL BM588169 [ ccgCTCGGGACACTGGCTGTCGGTGGTAGCAACCTTG TTTCTGCGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTACTTAGTTGTGGTTTGAAACATAGAGAAAAGGTGCCAAGCAAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGTGAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGGTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAG ] [-] EMBL CNS09RGW [ CATCGGCAGCGTGATCAAGTTCCTGCACCAGTACCGGCTGGACGGCATCG AGCTGTTGTGGCTCTATCCGGGCAACTTCGATC GGGGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTTTCTCGTGTCCGAGCTGGCCAAGGTGGTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGCATGGCAGTCGGGTACCACCAGGAGGAGCTGAACGCGGCGGCCGACTTCGTGCACATGGTCGGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCACCCTGGCGCCCCGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGAACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGCCGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATCGGGGCCGGCGATCCGGGCCCGTACAGCAACGAGCCGGGCTATCTCGGCTACTGCGAGTTCTGCCACAATCTGACCAGCGACGAGTGGACGAAGAAGTGGGACGATGTGGGCCTGTGCCCGTACGCGTACACCGAGACGACCTGGATCGGGTACGAGAACGAGCGGTCGCTGCAGGAAAAGATCAACTACGTGAAGCAGAAGCGGCTGGGCGGGCTGTACGCGTTCTCGCTCGATCTGGACGACTATAGGGGGGCATGCGGGGAACCGTTCCCGCTGACCCGCTTCCTATCGCGCTATCACGACGAAACGAAGATCAAAGATTGGCACATTTTCATCTCGACCACGGAGCGGAAGGAGATCAATACGACGGAAGCCGAATCGTAACAATCGTGGGCAACATCACTAAGCTTAACACACGCATTGTGTAATGTATTTTATAATACAAAAAATAA ] [-] EMBL CNS08UU2 [ atatatATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAGAACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGCCGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATCGGGGCCGGCGATCCGGGCCCGTACAGCAACGAGCCGGGCTTTCTCGGCTACTGCGAGTTCTGCCACAATCTGACCAGCGACGAGTGGACGAAGAAGTGGGACGATGTGGGCCTGTGCCCGTACGCGTACACCGAGACGACCTGGATCGGGTACGAGAACGAGCGGTCGCTGCAGGAAAAGATCAACTACGTGAAGCAGAAGCGGCTGGGCGGGCTGTACGCGTTCTCGCTCGATCTGGACGACTATAGGGGGGCATGCGGGGAACCGTTCCCGCTGACCCGCTTCCTATCGCGCTATCACGACGAAACGAAGATCAAAGATTGGCACATTTTCATCTCGACCACGGAGCGGAAGGAGATCAATACGACGGAAGCCGAATCGTAACAATCGTGGGCAACATCACTAAGCATAACACACGCATTGTGTAATGTATTTTATAATAC AAAAATAAAGGCAAATTGCAACCC] consensusID : consensus_9275#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGCGCGAGCGCGACAACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTGGGGGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACATAAAGAAAAAGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTCCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGC] [+] EMBL BM637459 [CCGCGGACGCGTGGGCGGACGCGTGGGCGCGAGCGCGACAACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTGGGGGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACATAAAGAAAAAGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTCCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAGCCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTCCCCCACCTGAAGCTGCTGATCGC] consensusID : consensus_9275#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence [TGNAATTACGCTCAGCCAGAATCGGCCGAGGCNGNGTACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTAGTGGTTTGAAACATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAAGCGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCT] [+] EMBL BX466345 [TGNAATTACGCTCAGCCAGAATCGGCCGAGGCNGNGTACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTAGTGGTTTGAAACATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAAGCGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCT] consensusID : consensus_9275#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 340 fasta sequence [CCCGAGGTTTTAGCGCGACAACACGCATCTCGCGGACACTGGTTGTCGGTGGTAGCACCTGTTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACAATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGG] [+] EMBL AL929886 [CCCGAGGTTTTAGCGCGACAACACGCATCTCGCGGACACTGGTTGTCGGTGGTAGCACCTGTTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACAATAGAGAAAAGGTGCTAAACAAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCATGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCCGCGACCGGCCGGACGAAGGTTCCTTCCAGATCAACGACATCCCGGGCAACCTTTGCTCGCACGTCGTCTACAACTTCCTCGG] consensusID : consensus_9275#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 282 fasta sequence [GGCCAAGAATCGCAGAGGTAACACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACCATAGGAGAAACAGGTGCTAAAACAAAATAGAACATCCCATCGGTTAATTGGAAAGGGTTCGGTTGGTCCTTGGTTGGTTTCTGGCTCCATTGAAGGCCAGGCCCTTTGGCGCCTTGGGCCTGGCTTGGAAAAACCCCCGGGTTTNTTCC] [+] EMBL AL697262 [GGCCAAGAATCGCAGAGGTAACACACGCATCTCGGGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTGTGCTGGAATTGAAGCTTTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTGTGGTTTGAAACCATAGGAGAAACAGGTGCTAAAACAAAATAGAACATCCCATCGGTTAATTGGAAAGGGTTCGGTTGGTCCTTGGTTGGTTTCTGGCTCCATTGAAGGCCAGGCCCTTTGGCGCCTTGGGCCTGGCTTGGAAAAACCCCCGGGTTTNTTCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 TAGGTAGTAGAGGTACGGTATACCTCCGTATATGTACGATCGAAATCCATCAGTAAACCT 60 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 AACGTCCTGTGAATTACCTTTAGCACTTTTAATGAATTCCACCAGCCATACAGCAAGATA 120 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 CGAACGATCGTTACTATCATCTTTCTGTTGTTGTTTGCGTTGGTTGTGCTTCCGTTCCCA 180 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 ACGCTCCCCCACTGCCACAATCGGGTCTGTGGGTTTTATTGCCCAGAATTTCCCCTGCTG 240 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 TTTACCAAACGAACAGGTTTTTTTTTCTACACACCCAGACATTCGTGCGAGGGGTAAGTG 300 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------CCGCGGACGCGTGGGCGGACGCGTGGGCGCGAGCGCGACAAC--ACGC 46 consensus_9275#3 -------------------------------CCCG-AGGTTTTAGCGCGACAAC--ACGC 26 consensus_9275#0 AGTTGTTGTGCGATGCGCGCGCTGCATTCTGTATTAAGACGCGAGCGCGACAAC--ACAC 358 consensus_9275#2 -------------------TGNAATTACGCTCAGCCAGAATCGGCCGAGGCNGNGTACGC 41 consensus_9275#4 --------------------------------GGCCAAGAATCGCAGAGGTAACACACGC 28 * * ** * consensus_9275#1 ATCTCG-GGACACTGGTTGTCGGTGGTAGCAACCTTGTTTGG-GGGCTGGAATTGAAGCT 104 consensus_9275#3 ATCTCGCGGACACTGGTTGTCGGTGGTAGCA--CCTGTTTCT-GTGCTGGAATTGAAGCT 83 consensus_9275#0 ATCTCG-GGACACTGGCTGTCGGTGGTAGCAACCTTGTTTCT-GCGCTGGAATTGAAGCT 416 consensus_9275#2 ATCTCG-GGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCTTGTGCTGGAATTGAAGCT 100 consensus_9275#4 ATCTCG-GGACACTGGTTGTCGGTGGTAGCAACCTTGTTTCT-GTGCTGGAATTGAAGCT 86 ****** ********* ************** * ***** * *************** consensus_9275#1 TTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTT-GTGGTTTGAAACA-TAAAGAAAA-- 160 consensus_9275#3 TTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTT-GTGGTTTGAAACAATAGAGAAAA-- 140 consensus_9275#0 TTTGCCAAGTGAAAATCATGTTCGCTACTTAGTT-GTGGTTTGAAACA-TAGAGAAAA-- 472 consensus_9275#2 TTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTTAGTGGTTTGAAACA-TAGAGAAAA-- 157 consensus_9275#4 TTTGCCAAGTGAAAATCATGTTCGCTGCTTAGTT-GTGGTTTGAAACCATAGGAGAAACA 145 ************************** ******* ************ ** *** consensus_9275#1 AGTGCTAAAC--AAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTCCTCA 218 consensus_9275#3 GGTGCTAAAC--AAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCA 198 consensus_9275#0 GGTGCCAAGC--AAATAGAACATCCCATCGTAATGAAGTTTGTTGTCTGTGTTCTGCTAA 530 consensus_9275#2 GGTGCTAAAC--AAATAGAACATCCCATCGTAATGAAGTTCGTTGTCTGTGTTCTGCTCA 215 consensus_9275#4 GGTGCTAAAACAAAATAGAACATCCCATCG--GTTAATTGGAAAGGGTTCGGTTGGTCCT 203 **** ** ****************** * ** * * * * * consensus_9275#1 TGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCC 278 consensus_9275#3 TGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCC 258 consensus_9275#0 TGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCC 590 consensus_9275#2 TGAGCAGCCTTGCGCTGGCTGCTGAAACCCGTTTCGTCTGCCACTATACGACCTGGTCCC 275 consensus_9275#4 TGGTTGGTTTCTGGCT--CCATTGAAGGCCAGGCCCTTTGGCGCCTTG-GGCCTGGCTTG 260 ** * * *** * **** ** * * ** * * * * ***** consensus_9275#1 GCGACCGGCCGGACGAAGGTTCCTTCCAGATCAA-CGACATCCCGGGCAACCTTTGCTCG 337 consensus_9275#3 GCGACCGGCCGGACGAAGGTTCCTTCCAGATCAA-CGACATCCCGGGCAACCTTTGCTCG 317 consensus_9275#0 GCGACCGGCCGGACGAAGGTTCCTTCCAGATCAA-CGACATCCCGGGCAACCTTTGCTCG 649 consensus_9275#2 GCGACCGGCCGGACGAAGGTTCCTTCCAGATCAAGCGACATCCCGGGCAACCTTTGCTCG 335 consensus_9275#4 GAAAAACCCCCG-----GGTTTNTTCC--------------------------------- 282 * * ** * **** **** consensus_9275#1 CACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAG 397 consensus_9275#3 CACGTCGTCTACAACTTCCTCGG------------------------------------- 340 consensus_9275#0 CACGTCGTCTACAACTTCCTCGGCGTGAACGAAACCTCCTACCAGCTGGAGCTGCTGCAG 709 consensus_9275#2 CACGTCGTCTACAACTTCCT---------------------------------------- 355 consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 CCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTC 457 consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 CCCGACTATGACCTCGGCGAGCGGGCGATCGAACGGTTCGCCGCGCTGAAAGATCAGTTC 769 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 CCCCACCTGAAGCTGCTGATCGC------------------------------------- 480 consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 CCCCACCTGAAGCTGCTGATCGCGGTCGGTGGCTGGGCGCACGGTGGTGCGCGCTTCAGT 829 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 GAGATGGCCAAGTTTCGCACCCGGCGCAATCAGTTCATCGGCAGCGTGATCAAGTTCCTG 889 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 CACCAGTACCGGCTGGACGGCATCGAGCTGGTGTGGCTCTATCCGGGCAACTTCGATCGG 949 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 GGCGGCGCTGTGGAGGACAAGGACACCTTCCTCTATCTCGTGTCCGAGCTGGCCAAGGTG 1009 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 GTGCGGGACGAGAAGAAACCGTACGAGGTGGTGATACAGGTGCCGGTCGACATCTCGCGC 1069 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 ATGGCGGTCGGGTACCACCAGGAGGAGCTGTGCGCGGCGGCCGACTTCGTGCACATGGTC 1129 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 GGGTACGATCTGCGCGGCTGGTGGAACAACTTTGCCGACGTGCACAGCCCGCTGGCGCCC 1189 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 CGACCGAACGATCTCGTGATGGACAGCTTCGAGCACGTGAACGTGGGGGACGGCGTGCAG 1249 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 GACTGGCTCGACAAGGGCTGCCCGCCCGAGAAGGTGACGCTCGGGGTGGCCCTGTTCGGC 1309 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 CGCACCTACCTGCTGGACGATCCGCTCGACAACACGATCGGTGCGGTGACGATCGGGGCC 1369 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 GGCGATCCGGGCCCGTACAGCAACGAGCCGGGCTATCTCGGCTACTGCGAGTTCTGCCAC 1429 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 AATCTGACCAGCGACGAGTGGACGAAGAAGTGGGACGATGTGGGCCTGTGCCCGTACGCG 1489 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 TACACCGAGACGACCTGGATCGGGTACGAGAACGAGCGGTCGCTGCAGGAAAAGATCAAC 1549 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 TACGTGAAGCAGAAGCGGCTGGGCGGGCTGTACGCGTTCTCGCTCGATCTGGACGACTAT 1609 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 AGGGGGGCATGCGGGGAACCGTTCCCGCTGACCCGCTTCCTATCGCGCTATCACGACGAA 1669 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 ACGAAGATCAAAGATTGGCACATTTTCATCTCGACCACGGAGCGGAAGGAGATCAATACG 1729 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ------------------------------------------------------------ consensus_9275#3 ------------------------------------------------------------ consensus_9275#0 ACGGAAGCCGAATCGTAACAATCGTGGGCAACATCACTAAGCTTAACACACGCATTGTGT 1789 consensus_9275#2 ------------------------------------------------------------ consensus_9275#4 ------------------------------------------------------------ consensus_9275#1 ----------------------------------------- consensus_9275#3 ----------------------------------------- consensus_9275#0 AATGTATTTTATAATACAAAAATAAAGGCAAATTGCAACCC 1830 consensus_9275#2 ----------------------------------------- consensus_9275#4 ----------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||