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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9277#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 968 fasta sequence
[CAACATACAACACCAAAATCAATGCGTCTTTCCCTCGCTTTCTCCACAGCATGGCGGACGCTGCTCCAGCCCGTGGTGGATTTAGAGGAGGATTCGGCTCGCGTGGCGGTGCCCGCGGCGGTGGTCGTGGTGGACGTGGTCGCGGCCGTGGCCGTGGACGCGGACGCGGCGGCAAGGAGGACTCGAAGGAATGGGTGCCGGTGACGAAGCTGGGCCGCCTGGTGAAGGACGGCAAGATCCGCACGCTGGAGGAAATCTATCTGTACTCGCTCCCGATCAAAGAGTTCGAGATCATCGATTTCTTCCTGAACCGTCTGCTGAAGGATGAGGTGCTGAAGATCATGCCCGTCCAGAAGCAGACCCGTGCCGGTCAACGTACCCGCTTCAAGGCGTTCGTTGCCATCGGCGACAGCAACGGTCACATCGGTCTGGGTGTGAAGTGCAGCAAGGAAGTGGCCACCGCCATCCGTGGTGCCATCATCCTGGCCAAGCTGTCGGTTGTCCCGGTGCGTCGTGGCTACTGGGGTAACAAGATCGGTCGCCCTCACACCGTACCGTGCAAGGTCAGCGGCAAGTGCGGTTCCGTTCTGGTGCGTCTGATTCCGGCTCCGCGTGGTACCGGCATCGTATCTGCCCCGGTTCCGAAGAAGCTAAAAAAGATGGCTGGTATTGACGATTGCTATACCACCACCCGTGGTTCCACGACCACGCTCGGTAACTTCGCGAAGGCCACGTACGCCGCCATTGCCAAGACGTACGCCTTCCTGACGCCGGACTTGTGGAAGGATCTGCCGCTGAACAAGACCCCGTACCAGGAGTTCGCCGACTTCCTCGACAAGACCAACAAGACCGGTCAGCGTGTCATCGAGATGTAAGGATTTTCTCCTCGCATCTTAATTGACGTGCAAAGGCGCTGGTGCGTCATTTGCTGCTGCTGCTCGATCATTGCCCGACTCTAGGGGAAGGCA]
[+] EMBL CNS08SJM [CAACATACAACACCAAAATCAATGCGTCTTTCCCTCGCTTTCTCCACAGCATGGCGGACGCTGCTCCAGCCCGTGGTGGATTTAGAGGAGGATTCGGCTCGCGTGGCGGTGCCCGCGGCGGTGGTCGTGGTGGACGTGGTCGCGGCCGTGGCCGTGGACGCGGACGCGGCGGCAAGGAGGACTCGAAGGAATGGGTGCCGGTGACGAAGCTGGGCCGCCTGGTGAAGGACGGCAAGATCCGCACGCTGGAGGAAATCTATCTGTACTCGCTCCCGATCAAAGAGTTCGAGATCATCGATTTCTTCCTGAACCGTCTGCTGAAGGATGAGGTGCTGAAGATCATGCCCGTCCAGAAGCAGACCCGTGCCGGTCAACGTACCCGCTTCAAGGCGTTCGTTGCCATCGGCGACAGCAACGGTCACATCGGTCTGGGTGTGAAGTGCAGCAAGGAAGTGGCCACCGCCATCCGTGGTGCCATCATCCTGGCCAAGCTGTCGGTTGTCCCGGTGCGTCGTGGCTACTGGGGTAACAAGATCGGTCGCCCTCACACCGTACCGTGCAAGGTCAGCGGCAAGTGCGGTTCCGTTCTGGTGCGTCTGATTCCGGCTCCGCGTGGTACCGGCATCGTATCTGCCCCGGTTCCGAAGAAGCTAAAAAAGATGGCTGGTATTGACGATTGCTATACCACCACCCGTGGTTCCACGACCACGCTCGGTAACTTCGCGAAGGCCACGTACGCCGCCATTGCCAAGACGTACGCCTTCCTGACGCCGGACTTGTGGAAGGATCTGCCGCTGAACAAGACCCCGTACCAGGAGTTCGCCGACTTCCTCGACAAGACCAACAAGACCGGTCAGCGTGTCATCGAGATGTAAGGATTTTCTCCTCGCATCTTAATTGACGTGCAAAGGCGCTGGTGCGTCATTTGCTGCTGCTGCTCGATCATTGCCCGACTCTAGGGGAAGGCA]
consensusID : consensus_9277#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 913 fasta sequence
[AGAATCGCGCACGAGGTANAACATCTACGGTTGGTTCTGGTCGAACAACCGTGAGAAGATTCACGCCACCAACCAGAT-TCCGAACGGTTGGGGATACAATCCGTGGAGCAAATCGGGCCACAAGAAGATCCCGCAGCCGGATAACGCCGAATTCGATATCAACCAGACGACCGAGTCCTGTCTGTCGATCCTGAACAATGTGTACAACGATGGTATCGGCTGGCACGATGTGGCCTGCTACCACGAGAAGCCGGTCGTGTGTGAAGATTCCGAGGAGCTGCTGAACTACGTGAGCGCCACCAAT-CCGGGAATCCGTCTGTAAGATGGAACGCACCGGTTGGCCGACGCTT-GTCGTGG-AAGAGCATTAGAACTGCCTGG-TGATGGTGAAACTGCCTCGAAGCGCACCATCAACTCGAGGAATCAAACACTCCTCCTTTCTTTCTCCTATCCAACTCATGTTGCTACTATACTGCTCATCGTGGAAAGGCGTAGTACGTTTCCTCATTTAGTAGATCAATGTTGCAGAAAACGTCCAGTGTTGTAAATTTGTCTGTTTAAGAAGAAGAAAATATGCATTACAATGAAAGCGAACGAAGCAATCGATTCGGCACCTTTCCAAATCGCTCGAACGCCATTCATCCTT-----GAAGCATTGAATTTGTGTCCTAACACTACGGTAAATTATAAAACGTTGAATATAATGCTACTTTCTCCGATCCTTTCACCATTTGTTCCACTCGACTATAAAATTTACAACAGGTAATCTAAAGTAATCACGCTGAAAGTAAATCAACATCCATACACAAATACACACAAGCACTCACTGGAATACATGTAAAATGTTTTCTAAATGTATATTTATTGAATAAATAGACTTTTTAAGAAATAATAAAATACCAACNAAAAGCAGGCATGT]
[+] EMBL BX469246 [AGAATCGCGCACGAGGTANAACATCTACGGTTGGTTCTGGTCGAACAACCGTGAGAAGATTCACGCCACCAACCAGAT TCCGAACGGTTGGGGATACAATCCGTGGAGCAAATCGGGCCACAAGAAGATCCCGCAGCCGGATAACGCCGAATTCGATATCAACCAGACGACCGAGTCCTGTCTGTCGATCCTGAACAATGTGTACAACGATGGTATCGGCTGGCACGATGTGGCCTGCTACCACGAGAAGCCGGTCGTGTGTGAAGATTCCGAGGAGCTGCTGAACTACGTGAGCGCCACCAAT CCGGGAATCCGTCTGTAAGATGGAACGCACCGGTTGGCCGACGCTT GTCGTGG AAGAGCATTAGAACTGCCTGG TGATGGTGAAACTGCCTCGAAGCGCACCATCAACTCGAGGAATCAAACACTCCTCCTTTCTTTCTCCTATCCAACTCATGTTGCTACTATACTGCTCATCGTGGAAAGGCGTAGTACGTTTCCTCATTTAGTA ATCAATGTTGCAGAAAACGTCCAGTGT ]
[+] EMBL BM638648 [ ccgagAACATCTACGGTTGGTTCTGGTCGAACAACCGTGAGAAGATTCACGCCACCAACCAGAT TCCGAACGGTTGGGGATACAATCCGTGGAGCAAATCGGGCCACAAGAAGATCCCGCAGCCGGATAACGCCGAATTCGATATCAACCAGACGACCGAGTCCTGTCTGTCGATCCTGAACAATGTGTACAACGATGGTATCGGCTGGCACGATGTGGCCTGCTACCACGAGAAGCCGGTCGTGTGTGAAGATTCCGAGGAGCTGCTGAACTACGTGAGCGCCACCAAT CCGGGAATCCGTCTGTAAGATGGAACGCACCGGTTGGCCGACGCTT GTCGTGG AAGAGCATTAGAACTGCCTGG TGATGGTGAAACTGCCTCGAAGCGCACCATCAACTCGAGGAATCAAACACTCCTCCTTTCTTTCTCCTATCCAACTCATGTTGCTACTATACTGCTCATCGTGGAAAGGCGTAGTACGTTTCCTCATTTAG ]
[+] EMBL BX621120 [ GTTCTGGTCGAACAACNGTGAGAAGATTCACGCCACCAACCAGATAGCCGAACGGTTGGGGATACAATCCGTGGAGCAAATCGGGCCACAAGAAGATCCCGCAGCCGGATAACGCCGAATTCGATATCAACCAGACGACCGAGTCCTGTCTGTCGATCCTGAACAATGTGTACAACGATGGTATCGGCTGGCACGATGTGGCCTGCTACCACGAGAAGCCGGTCGTGTGTGAAGATTCCGAGGAGCTGCTGAACTACGTGAGCGCCACCAAT CCGGGAATCCGTCTGTAAGATGGAACGCACCGGTTGGCCGACGCTT GTCGTGG AAGAGCATTAGAACTGCCTGG TGATGGTGAAACTGCCTCGAAGCGCACCATCAACTCGAGGAATCAAACACTCCTCCTTTCTTTCTCCTATCCAACTCATGTTGCTACTATACTGCTCATCGTGGAAAGGCGTAGTACGTTTCCTCATTTAGTAGATCAATGTTGCAGAAAACGTCCAGTGTTGTAAATTTGTCTGTTTAAGAAGAAGAAAATATGCATTACAATGAAAGCGAACGAAGCAATCGATTCGGCACCTTTCCAAATCGCTCGAACGCCATTCATCCTT GAAGCATTGAATTTGTGTCCTAACACTACGGTAAATTATAAAACGTTGAATATAATGCTACTTTCTCCGATCCTTTCNCCATTTGTTCCACTCGACTATAAAATTTACAACAGGTAATC ]
[+] EMBL BX617481 [ AGAAGATCCCGCAGCCGGATAACGCCGAGTTCGATATCAACCAGACGACCGAGTCCTGTCTGTCGATCCTGAACAATGTGTACAACGATGGTATCGGCTGGCACGATGTGGCCTGCTACCACGAGAAGCCGGTCGTGTGTGAAGATTCCGAGGAGCTGCTGAACTACGTGAGCGCCACCAAT CCGGGAATCCGTCTGTAAGATGGAACGCACCGGTTGGCCGACGCTT GTCGTGG AAGAGCATTAGAACTGCCTGG TAATGGTGAAAATGCCTCGAAGCGCACCATCAACTCGAGGAATCAAACACTCCTCCTTTCTTTCTCCTATCCAACTCATGTTGCTACTATACTGCTCATCGTGGAAAGGCGTAGTACGTTTCCTCATTTAGTAGATCAATGTTGCAGAAAACGTCCAGTGTTGTAAATTTGTCTGTTTAAGAAGAAGAAAATATGCATTACAATCAAAGCGAACGAAGCAATCGATTCGGCACCTCTCCAAATCGCTCGAACGCAATTCATCCTTATTCCCAAGCATTGAATTTGTGTCCTAACACTACGGTAAATTATAAAACGTTGAATATAATGCTACTTTCTCCGATCCTTTCACCATTTGTTCCACTCGACTATAAAATTTACAACAGGTAATCTAAAGTAATCACGCTGAAAGTAAATCAACATCCATACACAAATACACAC ]
[+] EMBL BX608104 [ AGAAGATCCCGCAGCCGGATAACGCCGAGTTCGATATCAACCAGACGACCGAGTCCTGTCTGTCGATCCTGAACAATGTGTACAACGATGGTATCGGCTGGCACGATGTGGCCTGCTACCACGAGAAGCCGGTCGTGTGTGAAGATTCCGAGGAGCTGCTGAACTACGTGAGCGCCACCAAT CCGGGAATCCGTCTGTAAGATGGAACGCACCGGTTGGCCGACGCTT GTCGTGG AAGAGCATTAGAACTGCCTGG TAATGGTGAAAATGCCTCGAAGCGCACCATCAACTCGAGGAATCAAACACTCCTCCTTTCTTTCTCCTATCCAACTCATGTTGCTACTATACTGCTCATCGTGGAAAGGCGTAGTACGTTTCCTCATTTAGTAGATCAATGTTGCAGAAAACGTCCAGTGTTGTAAATTTGTCTGTTTAAGAA ]
[-] EMBL BX466651 [ gttgGAGCGCCACCAATCCCGGGAATCCGTCTGTAAGATGGAACGCACCGGTTGGCCGACGCTTGGTCGTGGTAAGAGCATTAGAACTGCCTGGCTGATGGTGAAACTGCCTCGAAGCGCACCATCAACTCGAGGAATCAAACACTCCTCCTTTCTTTCTCCTATCCAACTCATGTTGCTACTATACTGCTCATCGTGGAAAGGCGTAGTACGTTTCCTCATTTAGTAGATCAATGTTGCAGAAAACGTCCAGTGTTGTAAATTTGTCTGTTTAAGAAGAAGAAAATATGCATTACAATGAAAGCGAACGAAGCAATCGATTCGGCACCTTTCCAAATCGCTCGAACGCCATTCATCCTT GAAGCATTGAATTTGTGTCCTAACACTACGGTAAATTATAAAACGTTGAATATAATGCTACTTTCTCCGATCCTTTCACCATTTGTTCCACT GACTATAAAATTTACAACAGGTAATCTAAAGTAATCACGCTGAAAGTAAATCAACATCCATACACAAATACACACAAGCACTCACTGGAATACATGTAAAATGTTTTCTAAATGTATATTTATTGAATAAATAGACTTTTTAAGAAATAATAAAATACCAACNAAAAGCAGGCATGT]
[+] EMBL BX613159 [ GCACAAAACGTCCAGTGTTGTAAATTTGTCTGTTTAAGAAGAAGAAAATATGCATTACAATGAAAGCGAACGAAGCAATCGATTCGGCACCTTTCCAAATCGCTCGAACGCCATTCATCCTT GAAGCATTGAATTTGTGTCCTAACACTACGGTAAATTATAAAACGTTGAATATAATGCTACTTTCTCCGATCCTTTCACCATTTGTTCCACTCGACTATAAAATTTACAACACGTAATCTAAAGTA ]
consensusID : consensus_9277#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 913 fasta sequence
[GTGGCCAATCAACTGACAATGCTGCAGCACCTCGTGCGCAGTCGGCTCCTTCTTCTCTGGCGCAAGCCTTCAATCCTGAAATCGTAGCATGAGCATGAGTTGACTGTTTCTTTCGTAAAATCCCTACCATCTTGCTAAGCCATCCACACTCTTGCGATTCGTTCATTTCATTTGCATTCTCATCGTTTAATTTTCATCATATACCATATCACCGTTAGCAAACCGACCACCGCTCCATCGGCTGCCTATTTGATGCGGACCAAAGATGGCAAGTTTCTAAACTCACCGCTCACCATGAACTGCACCACCTCGCCCATGTGCATGACGGTGCGCGGCACCCCGTTACACTAACGCGCCTCCTAACCGTTCGCTTGGCTTGGTGTGCATCAACTTCCTTCCCCGTTTTAATCCACTAAACAGCTCATCTCACCATTGACACATACTCATACGATCCGAGCTTCTTTGGCACCTAACCATACCCCATGAAAAGTTCTCGTTGTTCGTTATTACCTACCGTGTGTATTTTATGCTTGTGTATCCTTCACCCCTTACCCCATTTACCTCCCCCCACCACTCGTTCCGTTGTGCATGTAATTGCATTCCGCAACCAATCATACCCCTCCCACCAATGTCCCAGCAGCAACTTCCGGTACGCCGCATTCCANGAGC-AATGAGCGTGGGCGGACGTGGNGCTGCTGCTCCTACTGCTGGGGGACCGACGGCACAATCTGGGACAGGGACGACCAATGCCGCCGGGGCTGATTGTTCCGTTGTTGATCGGGCCACGCTGCAATCGCCACCCTCCAGGACGTAGGACGTCTTAGTGTGTGTCCTTGCTTATTGTATTAATCAACCGAGATGAATCTGATGGACGGAAGAAAGGCTTACGCGAAAGGANGGAACTTGTTGTGAT]
[+] EMBL BX624694 [GTGGCCAATCAACTGACAATGCTGCAGCACCTCGTGCGCAGTCGGCTCCTTCTTCTCTGGCGCAAGCCTTCAATCCTGAAATCGTAGCATGAGCATGAGTTGACTGTTTCTTTCGTAAAATCCCTACCATCTTGCTAAGCCATCCACACTCTTGCGATTCGTTCATTTCATTTGCATTCTCATCGTTTAATTTTCATCATATACCATATCACCGTTAGCAAACCGACCACCGCTCCATCGGCTGCCTATTTGATGCGGACCAAAGATGGCAAGTTTCTAAACTCACCGCTCACCATGAACTGCACCACCTCGCCCATGTGCATGACGGTGCGCGGCACCCCGTTACACTAACGCGCCTCCTAACCGTTCGCTTGGCTTGGTGTGCATCAACTTCCTTCCCCGTTTTAATCCACTAAACAGCTCATCTCACCATTGACACATACTCATACGATCCGAGCTTCTTTGGCACCTAACCATACCCCATGAAAAGTTCTCGTTGTTCGTTATTACCTACCGTGTGTATTTTATGCTTGTGTATCCTTCACCCCTTACCCCATTTACCTCCCCCCACCACTCGTTCCGTTGTGCATGTAATTGCATTCCGCAACCAATCATACCCCTCCCACCAATGTCCCAGCAGCAACTTCCGGTACGCCGCATTCCANGAGC AATGAGCGTGGGCGGACGTGGNGCTGCTGCTCCTACTGCTGGGGGAC ]
[+] EMBL BX622876 [ CACCTCGCCCATGTGCATGACGGTGCGCGGCACCCCGTTACACTAACGCGCCTCCTAACCGTTCGCTTGGCTTGGTGTGCATCAACTTCCTTCCCCGTTTTAATCCACTAAACAGCTCATCTCACCATTGACACATACTCATACGATCCGAGCTTCTTTGGCACCTAACCATACCCCATGAAAAGTTCTCGTTGTTCGTTATTACCTACCGTGTGTATTTTATGCTTGTGTATCCTTCACCCCTTACCCCATTTACCTCCCCCCACCACTCGTTCCGTTGTGCATGTAATTGCATTCCGCAACCAATCATACCCCTCCCACCAATGTCCCAGCAGCAACTTCCGGTACGCCGCATTCCAGGAGCAAATGAGCGTGGGCGGACGTGGTGCTGCTGCTCCTACTGCTGTGGCACCGACGGCACAATCTGGGACAGGGACGACCAATGCCGCCGGGGCTGATTGTTCCGTTGTTGATCGGGCCACGCTGCAATCGCCACCCTCCAGGACGTAGGACGTCTTAGTGTGTGTCCTTGCTTATTGTATTAATCAACCGAGATGAATCTGATGGACGGAAGAAAGGCTTACGCGAAAGGANGGAACTTGTTGTGAT]
consensusID : consensus_9277#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 858 fasta sequence
[CAGAGTAAGCCCGTATGCTCACTCTAAGCAACATCATTCACCATGCCGCAGAACGAGTATATTGAGCGGCACATTAAGCTGTACGGTCGCCGGCTCGATTATGAGGAGCGCAACTGACAGGGTGTAGGCTCGCGAGCCGAAGAAGCGCGCCGCCATGGCCCGCAAGCTGCGGGGCATGAAGGCGAA-CTGTTCCAGAAGCAGCGCCGCAACGAGAAGATCCAAATGAAGCGCAAGATCCAGGCGCACGAGGAGAAGAAGGTGAAGAAGACGACCGAAAAGGTGGAGGACGGTGCGCTGCCCCCGTACCTGATGGATCGTGGCATCCAATCGAACGCCAAGGTGCTGTCGAACATGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGGTGCCAAGAAGCGCAAGAAGAAGAACTACTCCACCCCGAAGAAGATCAAGCACAAGAGGAAGAAGGTCAAACTTGCTGTCCTCAAGTACTACAAGGTCGACGAGAACGGAAAGATCCACCGTCTGCGTCGTGAGTGCACCAGCGAGTCGTGCGGTGCTGGCGTGTTCATGGCTGCCCATGAGGACCGTCACTACTGCGGCAAGTGCCACCTGACGCTTGTCTACTCGAAGCAGGAGGAGAAGTAAAAGGTGAAAGTGGCGTGAGCGGAGGGGTGTACGGCGCGCTTGGCCGTATCAGTCTTGAACTCCAACCACACCAACCCCCCTCCACACGTGTAAGAGGCGCGTGCTCGCTTCTCAGGTTGCTTTTCCACTTCTTCTACCTGAGTTTAGTGTAATCGATGCGGC]
[+] EMBL CNS09QHF [CAGAGTAAGCCCGTATGCTCACTCTAAGCAACATCATTCACCATGCCGCAGAACGAGTATATTGAGCGGCACATTAAGCTGTACGGTCGCCGGCTCGATTATGAGGAGCGCAACTGACAGGGTGTAGGCTCGCGAGCCGAAGAAGCGCGCCGCCATGGCCCGCAAGCTGCGGGGCATGAAGGCGAA CTGTTCCAGAAGCAGCGCCGCAACGAGAAGATCCAAATGAAGCGCAAGATCCAGGCGCACGAGGAGAAGAAGGTGAAGAAGACGACCGAAAAGGTGGAGGACGGTGCGCTGCCCCCGTACCTGATGGATCGTGGCATCCAATCGAACGCCAAGGTGCTGTCGAACATGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGGTGCCAAGAAGCGCAAGAAGAAGAACTACTCCACCCCGAAGAAGATCAAGCACAAGAGGAAGAAGGTCAAACTTGCTGTCCTCAAGTACTACAAGGTCGACGAGAACGGAAAGATCCACCGTCTGCGTCGTGAGTGCACCAGCGAGTCGTGCGGTGCTGGCGTGTTCATGGCTGCCCATGAGGACCGTCACTACTGCGGCAAGTGCCACCTGACGCTTGTCTACTCGAAGCAGGAGGAGAAGTAAAAGGTGAAAGTGGCGTGAGCGGAGGGGTGTACGGCGCGCTTGGCCGTATCAGTCTTGAACTCCAACCACACCAACCCCCCTCCACACGTGTAAGAGGCGCGTGCTCGCTTCTCAGGTTGCTTTTCCACTTCTTCTACCTGAGTTTAGTGTAATCGATGCGGC]
[-] EMBL CNS09QHG [ CACTCTAAGCAACATCATTCACCATGCCGCAGAACGAGTATATTGAGCGGCACATTAAGCTGTACGGTCGCCGGCTCGATTATGAGGAGCGCAAGCGTAAGCG GGAGGCTCGCGAGCCGAAGAAGCGCGCCGCCATGGCCCGCAAGCTGCGGGGCATGAAGGCGAAGCTGTTCCAGAAGCAGCGCCGCAACGAGAAGATCCAAATGAAGCGCAAGATCCAGGCGCACGAGGAGAAGAAGGTGAAGAAGACGACCGAAAAGGTGGAGGACGGTGCGCTGCCCCCGTACCTGATGGATCGTGGCATCCAATCGAACGCCAAGGTGCTGTCGAACATGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGGTGCCAAGAAGCGCAAGAAGAAGAACTACTCCACCCCGAAGAAGATCAAGCACAAGAGGAAGAAGGTCAAACTTGCTGTCCTCAAGTACTACAAGGTCGACGAGAACGGAAAGATCCACCGTCTGCGTCGTGAGTGCACCAGCGAGTCGTGCGGTGCTGGCGTGTTCATGGCTGCCCATGAGGACCGTCACTACTGCGGCAAGTGCCACCTGACGCTTGTCTACTCGAAGCAGGAGGAGAAGTAAAAGGTGAAAGTGGCGTGAGCGGA GGGTGTACGGCGCGCTTGGCCGTATCAGTCTTGAACTCCAACCACACCAACCCCCCTCCACACGTGTAAG ]
consensusID : consensus_9277#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence
[GGCAGAATCCCCCGAGGTTTTGTACAAACATCGCGCTTGCATTATTTTAAGCCAATCAGTGAAGATGCAGCTGCACGTTCGAGGTCTAAATACGCACGTCTTGGACGTCCAGCCGGGTGACAGCATTAGCCATGTTAAGGCTGTTCTGGCAGGACTAGAGTCCGTCGACGCTCAGTGAACTGAACCTCTACTGCGAAGGCGTACCACTCGGTGAGGATGTGACCGTATCTCAGTGACCTCGGTCGAGCTCGACTCACCGTCAGCCTGCTCGGTGGTAAGGTGCACGGTTCGCTCGCCCGTGCCGGCAAAGTGAAGGGACAAACGCCCAAGGTCGAAACACGAAGGACACCAGAAGAAGAAGAAGACGGGCCGTGCTAAGCGTCGCATTCAGTACAACCGCCGTTTCTCGAGCCGTGGTGCAGAGCGTACGGACGTACGCCGCGGTCCGAATGCCAACTCAGCCTAAGGAGCTGTNAGGTACTCTGATGGAGGGCGCAAGTCAAAACGGACAGGGCGCTGTATTCATCTTCGTGTGTCTNGGTCGCGCNCAACGCAACGTTCAACGCCGAAAAGCTATTAACAAGCCCANGCAACCACAACTCTTCACAGCATTGCGTTGCCCGCTTGATGTACACGAGGCATTCTGNNGGCTTTCCGCTTCCACTTCACCACACACGAAAGTGCT]
[+] EMBL AL692437 [GGCAGAATCCCCCGAGGTTTTGTACAAACATCGCGCTTGCATTATTTTAAGCCAATCAGTGAAGATGCAGCTGCACGTTCGAGGTCTAAATACGCACGTCTTGGACGTCCAGCCGGGTGACAGCATTAGCCATGTTAAGGCTGTTCTGGCAGGACTAGAGTCCGTCGACGCTCAGTGAACTGAACCTCTACTGCGAAGGCGTACCACTCGGTGAGGATGTGACCGTATCTCAGTGACCTCGGTCGAGCTCGACTCACCGTCAGCCTGCTCGGTGGTAAGGTGCACGGTTCGCTCGCCCGTGCCGGCAAAGTGAAGGGACAAACGCCCAAGGTCGAAACACGAAGGACACCAGAAGAAGAAGAAGACGGGCCGTGCTAAGCGTCGCATTCAGTACAACCGCCGTTTCTCGAGCCGTGGTGCAGAGCGTACGGACGTACGCCGCGGTCCGAATGCCAACTCAGCCTAAGGAGCTGTNAGGTACTCTGATGGAGGGCGCAAGTCAAAACGGACAGGGCGCTGTATTCATCTTCGTGTGTCTNGGTCGCGCNCAACGCAACGTTCAACGCCGAAAAGCTATTAACAAGCCCANGCAACCACAACTCTTCACAGCATTGCGTTGCCCGCTTGATGTACACGAGGCATTCTGNNGGCTTTCCGCTTCCACTTCACCACACACGAAAGTGCT]
consensusID : consensus_9277#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 582 fasta sequence
[CCGCCCACGCGTCCGTGTGCTTTCGTGCGATACAGTTCAGCCTGCTTTGTACCAGCCAGTCGGTGCGGCTCTCTCCTGCCTTTAAACGCAAAACGCGATATCACTCGTCTGTCCCCGGTGTGTTTGCTCTCTAACCAAAAAAAAGCCCCCGCGCCCCCACCTAGTCCCGACCCGTTCCAGGATCCGTAGTGCAAATGAAAATGCAAAAAAAAAAACAATTAAAAAAACATAACTCTACTCTATGCTCCACAATGTGTGCCGTGACGGTATCTTTCGCTACTTTACGCAACAAGAACGAACCACGCATACCGGACTCTCTTTACTCACCTCCTATCTTTAAGCTCTAATCCTACTGTCGGCGCAACTATAGCGTATATACATTAAGCTGCCTGCTGCAAACCGCCATATTCTTCGCCAGCGTCGTAACCTTCCTACCGCTAGAACGTAAGACCGTGCCAGCCAGCCAACAAAACAACGACAAAAAACAACAACAACAACAACAAACAACTTTCGGTTTCATTTTTCCTAGTGCATATTCTTATTTCCGTTTTTTTTTAAATTTGGCAATGCGATCGGTACGGC]
[+] EMBL BM653814 [CCGCCCACGCGTCCGTGTGCTTTCGTGCGATACAGTTCAGCCTGCTTTGTACCAGCCAGTCGGTGCGGCTCTCTCCTGCCTTTAAACGCAAAACGCGATATCACTCGTCTGTCCCCGGTGTGTTTGCTCTCTAACCAAAAAAAAGCCCCCGCGCCCCCACCTAGTCCCGACCCGTTCCAGGATCCGTAGTGCAAATGAAAATGCAAAAAAAAAAACAATTAAAAAAACATAACTCTACTCTATGCTCCACAATGTGTGCCGTGACGGTATCTTTCGCTACTTTACGCAACAAGAACGAACCACGCATACCGGACTCTCTTTACTCACCTCCTATCTTTAAGCTCTAATCCTACTGTCGGCGCAACTATAGCGTATATACATTAAGCTGCCTGCTGCAAACCGCCATATTCTTCGCCAGCGTCGTAACCTTCCTACCGCTAGAACGTAAGACCGTGCCAGCCAGCCAACAAAACAACGACAAAAAACAACAACAACAACAACAAACAACTTTCGGTTTCATTTTTCCTAGTGCATATTCTTATTTCCGTTTTTTTTTAAATTTGGCAATGCGATCGGTACGGC]
consensusID : consensus_9277#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 137 fasta sequence
[ACGCCCCTTTTCCTTGACGGACGTGGCCACTTGCTTGGTCGACTGGCCTCGGTCGTCGCCCCGCCGATCCTGTCTGGTAACTCGGTGGTCGTGGTGCGCTGCGAGGGCCTTCAGCTGTCGGGCCATTTCTTCCGCAA]
[+] EMBL CNS09OMB [ACGCCCCTTTTCCTTGACGGACGTGGCCACTTGCTTGGTCGACTGGCCTCGGTCGTCGCCCCGCCGATCCTGTCTGGTAACTCGGTGGTCGTGGTGCGCTGCGAGGGCCTTCAGCTGTCGGGCCATTTCTTCCGCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9277#4 ------------------------------------------------------------
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 ------------------------------------------------------------
consensus_9277#3 ------------------------------------------------------------
consensus_9277#0 CAACATACAACACCAAAATCAATGCGTCTTTCCCTCGCTTTCTCCACAGCATGGCGGACG 60
consensus_9277#1 ----------------------------------------------AGAATCGCGCACGA 14
consensus_9277#5 ------------------------------------------------------------
consensus_9277#4 --------------GGCAGAATCCCCCGAGGTTTTGTACAAACATCGCGCTTGCATTATT 46
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 GTGGCCAATCAACTGACAATGCTGCAGCACCTCGTGCGCAGTCGGCTCCTTCTTCTCTGG 60
consensus_9277#3 -------------CAGAGTAAGCCCGTATGCTCACTCTAAGCAACATCATTCACCATGCC 47
consensus_9277#0 CTGCTCCAGCCCGTGGTGGATTTAGAGGAGGATTCGGCTCGCGTGGCGGTGCCCGCGGCG 120
consensus_9277#1 GGTANAACATCTACGGTTGGTTCTGGTCGAACAACCGTGAGAAGATTCACGCCACCAACC 74
consensus_9277#5 ------------------------------------------------------------
consensus_9277#4 TTAAGCCAATCAGTGAAGATGCAGCTGCACGTTCGAGGTCTAAATACGCACGTCTTGGAC 106
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 CGCAAGCCTTCAATCCTGAAATCGTAGCATGAGCATGAGTTGACTGTTTCTTTCGTAAAA 120
consensus_9277#3 GCAGAACGAGTATATTGAGCGGCACATTAAGCTGTACGGTCGCCGGCTCGATTATGAGGA 107
consensus_9277#0 GTGGTCGTGGTGGACGTGGTCGCGGCCGTGGCCGTGGACGCGGACGCGGCGGCAAGGAGG 180
consensus_9277#1 AGATTCCGAACGGTTGGGGATACAATCCGTGGAGCAAATCGGGCCACAAGAAGATCCCGC 134
consensus_9277#5 ------------------------------------------------------------
consensus_9277#4 GTCCAGCCGGGTGACAGCATTAGCCATGTTAAGGCTGTTCTG-GCAGGACTAGAGTCCGT 165
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 TCCCTACCATCTTGCTAAGCCATCCACACTCTTGCGATTCGT-TCAT--TTCATTTGCAT 177
consensus_9277#3 GCGCAACTGACAGGGTGTAGGCTCGCGAGCCGAAGAAGCGCG-CCGCCATGGCCCGCAAG 166
consensus_9277#0 ACTCGAAGGAATGGGTGCCGGTGACGAAGCTGGGCCGCCTGGTGAAGGACGGCAAGATCC 240
consensus_9277#1 AGCCGGATAACGCCGAATTCGATATCAACCAGACGACCGAGTCCTGTCTGTCGATCCTGA 194
consensus_9277#5 -----------------------------CCGCCCACGCGTCCGTGTGCTTTCGTGCGAT 31
consensus_9277#4 CGACGCTCAGTGAACTGAACCTCTACTGCGAAGGCGTACCACTCGGTGAGGATGTGACCG 225
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 TCTCATCGTTTAATTTTCATCATATACCATATCACCGTTAGCAAACCGACCACCGCTCCA 237
consensus_9277#3 CTGCGGGGCATGAAGGCGAACTGTTCCA-GAAGCAGCGCCGCAACGAGAAGATCCAAATG 225
consensus_9277#0 GCACGCTGGAGGAAATCTATCTGTACTC-GCTCCCGATCAAAGAGTTCGAGATCATCGAT 299
consensus_9277#1 ACAATGTGTACAACGATGGTATCGGCTGGCACGATGTGGCCTGCTACCACGAGAAGCCGG 254
consensus_9277#5 ACA-GTTCAGCCTGCTTTGTACCAGCCAGTCGGTGCGGCTCTCTCCTGCCTTTAAACGCA 90
consensus_9277#4 TATCTCAGTGACCTCGGTCGAGCTCGACTCACCGTCAGCCTGCTCGGTGGTAAGGTGCAC 285
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 TCGGCTGCCTATTTGATGCGGACCAAAGATGGCAAGTTTCTAAACTCACCGCTCACCATG 297
consensus_9277#3 AAGCGCAAGATCCAGGCGCACGAGGAGAAGAAGGTGAAGAAGACGACCGAAAAGGTGGAG 285
consensus_9277#0 TTCTTCCTGAACCGTCTGCTGAAGGATGAGGTGCTGAAGATCATGCCCGTCCAGAAGCAG 359
consensus_9277#1 TCGTGTGTGAAGATTCCGAGGAGCTGCTGAACTACGTGAGCGCCACCAATCCGGGAATCC 314
consensus_9277#5 AAACGCGATATCACTCGTCTG--TCCCCGGTGTGTTTGCTCTCTAACCAAAAAAAAGCCC 148
consensus_9277#4 GGT--TCGCTCGCCCGTGCCGGCAAAGTGAAGGGACAAACGCCCAAGGTCGAAACACGAA 343
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 AAC--TGCACCACCTCGCCCATGTGCATGACGGTGCGCGGCACCCCGTTACACTAACGCG 355
consensus_9277#3 GACGGTGCGCTGCCCCCGTACCTGATGGATCGTGGCATCCAATCGAACGCCAAGGTGCTG 345
consensus_9277#0 ACCC-GTGCCGGTCAACGTACCCGCTTCAAGGCGTTCGTTGCCATCGGCGACAGCAACGG 418
consensus_9277#1 GTCTGTAAGATGG-AACGCACCGGTTGGCCGACGCTTGTCGTGGAAGAGCATTAGAACTG 373
consensus_9277#5 CCGCGCCCCCACCTAGTCCCGACCCGTTCCAGGATCCGTAGTGCAAATGAAAATGCAAAA 208
consensus_9277#4 GGACACCAGAAGAAGAAGAAGACGGGCCGTGCTAAGCGTCGCATTCAGTACAACCGCCGT 403
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 CCTCCTAACCGTTCGCTTGGCTTGGTGTGCATCAACTTCCTTCCCCGTTTTAATCCACTA 415
consensus_9277#3 TCGAACATGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTACAAC 405
consensus_9277#0 TCACATCGGTCTGGGTGTGAAGTGCAGCAAGGAAGTGGCCACCGCCATCCGTGGTGCCAT 478
consensus_9277#1 CCTGGTGATGGTGAAACTGCCTCGAAGCGCACCATCAACTCGAGGAATCAAACACTCCTC 433
consensus_9277#5 AAAAAAACAATTAAAAAAACATAACTCTACTCTATGCTCCACAATGTGTGCCGTGACGGT 268
consensus_9277#4 TTCTCGAGCCGTGGTGCAGAGCGTAC-GGACGTACGCCGCGGTCCGAATGCCAACTCAGC 462
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 AACAGCTCATCTCACCATTGACACAT-ACTCATACGATCCGAGCTTCTTTGGCACCTAAC 474
consensus_9277#3 ATCCAGAAGGAGTCGACCCTTCATCT-GGTGCTGCGCCTGCGCGGTGGTGCCAAGA-AGC 463
consensus_9277#0 CATCCTGGCCAAGCTGTCGGTTGTCCCGGTGCGTCGTGGCTACTGGGGTAACAAGATCGG 538
consensus_9277#1 CTTTCTTTCTCCTATCCAACTCATGTTGCTACTATACTGCTCATCGTGGAAAGGCGTAGT 493
consensus_9277#5 ATCTTTCGCTACTTTACGCAACAAGAACGAACCACGCATACCGGACTCTCTTTACTCACC 328
consensus_9277#4 CTAAGGAGCTGTNAGGTACTCTGATGGAGGGCGCAAGTCAAAACGGAC------AGGGCG 516
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 CATACCCCATGAAAAGTTCTC-GTTGTTCGTTATTACCTACCGTGTGT------ATTTTA 527
consensus_9277#3 GCAAGAAGAAGAACTACTCCACCCCGAAGAAGATCAAGCACAAGAGGA------AGAAGG 517
consensus_9277#0 TCGCCCTCACACCGTACCGTGCAAGGTCAGCGGCAAGTGCGGTTCCGTTC--TGGTGCGT 596
consensus_9277#1 ACGTTTCCTCATTTAGTAGATCAATGTTGCAGAAAACGTCCAGTGTTGTAAATTTGTCTG 553
consensus_9277#5 TCCTATCTTTAAGCTCTAATCCTACTGTCGGCGCAACTATAGCGTATAT-----ACATTA 383
consensus_9277#4 CTGTATTCATCTTCGTGTGTCTNGGTC---GCGCNCAACGCAACGTTCAACGCCGAAAAG 573
consensus_9277#6 --------------ACGCCCCTTTTCC---TTGACGGACGTGGCCACTTGCTTGG----- 38
consensus_9277#2 TGCTTGTGTATCCTTCACCCCTTACCCCATTTACCTCCCCCCACCACTCGTTCCGTTGTG 587
consensus_9277#3 TCAAACTTGCTGTCCTCAAGTACTACAAGGTCGACGAGAACGGAAAGATCCACCGTCTGC 577
consensus_9277#0 CTGATTCCGGCTCCGCGTGGTACCGGCATCGTATCTGCCCCGGTTCCGAAGAAGCTAAAA 656
consensus_9277#1 TTTAAGAAGAAGAAAATATGCATTACAATGAAAGCGAACGAAGCAATCGATTCGGCACCT 613
consensus_9277#5 AGCTGCCTGCTGCAAACCGCCATATTCTTCGCCAGCGTCGTAACCTTCCTACCGCTAGAA 443
consensus_9277#4 CTATTAACAAGCCCANGCAACCA------CAACTCTTCACAGCA-TTGCGTTGCCCGCTT 626
consensus_9277#6 ---TCGACTGGCCTCGGTCGTCG------CCCCGC----CGATC-CTGT-CTGGTAACTC 83
consensus_9277#2 CATGTAATTGCATTCCGCAACCAATCATACCCCTCCCACCAATG-TCCCAGCAGCAACTT 646
consensus_9277#3 GTCGTGAGTGCACCAGCGAGTCG----TGCGGTGC----TGGCG-TGTTCATGGCTGCCC 628
consensus_9277#0 AAGATGGCTGGTATTGACGATTGCTATACCACCACC-CGTGGTT-CCACGACCAC-GCTC 713
consensus_9277#1 TTCCAAATCGCTCGAACGCCATTCATCCTTGAAGCATTGAATTT-GTGTCCTAACACTAC 672
consensus_9277#5 CGTAAGACCGTGCCAGCCAGCCAACAAAACAACGACAAAAAACAACAACAACAACAACAA 503
consensus_9277#4 GATGTACACGAGGC-ATTCTGNN----GGCTTTCCGCTTCCACTT-CACCACACACGAAA 680
consensus_9277#6 GGTGGTCGTGGTGC-GCTGCGAG----GGCCTTCAGCTGTCGGGC-CATTTCTTCCGCAA 137
consensus_9277#2 CCGGTACGCCGCAT-TCCANGAGCAATGAGCGTGGGCGGACGTGG-NGCTGCTGCTCCTA 704
consensus_9277#3 ATGAGGACCGTCACTACTGCGGC----AAGTGCCACCTGACGCTT-GTCTACTCGAAGCA 683
consensus_9277#0 GGTAACTTCGCGAAGGCCACGTA----CGCCGCCATTGCCAAGACGTACGCCTTCCTGAC 769
consensus_9277#1 GGTAAATTATAAAACGTTGAATATAA-TGCTACTTTCTCCGATCCTTTCACCATTTGTTC 731
consensus_9277#5 ACAACTTTCGGTTTCATTTTTCC----TAGTGCATATTCTTATTTCCGTTTTTTTTTAAA 559
consensus_9277#4 GTGCT------------------------------------------------------- 685
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 CTGCTGGGGGACCGACGGCACAATCTGGGACAGGGACGACCAATGCCGCCGGGGCTGATT 764
consensus_9277#3 GGAGGAGAAGTAAAAGGTGAAAGTGGCGTGAGCGGAGGGGTGTACGGCGCGCTTGGCCGT 743
consensus_9277#0 GCCGGACTTGTGGAAGGATCTGCCGCTGAACAAGACCCCGTACCAGGAGTTCGCCGACTT 829
consensus_9277#1 CACTCGACTATAAAATTTACAACAGGTAATCTAAAGTAATCACGCTGAAAGTAAATCAAC 791
consensus_9277#5 TTTGGCAATGCGATCGGTACGGC------------------------------------- 582
consensus_9277#4 ------------------------------------------------------------
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 GTTCCGTTGTTGATCGGGCCACGCTGCAATCGCCACCCTCCAGGACGTAGGACGTCTTAG 824
consensus_9277#3 ATCAGTCTTGAACTCCAACCACACCAACCCCCCTCCACACGTGTAAGAGGCGCGTGCTCG 803
consensus_9277#0 CCTCGACAAGACCAACAAGACCGGTCAGCGTGTCATCGAGATGTAAGGATTTTCTCCTCG 889
consensus_9277#1 ATCCATACACAAATACACACAAGCACTCACTGGAATACATGTAAAATGTTTTCTAAATGT 851
consensus_9277#5 ------------------------------------------------------------
consensus_9277#4 ------------------------------------------------------------
consensus_9277#6 ------------------------------------------------------------
consensus_9277#2 TGTGTGTCCTTGCTTATTGTATTAATCAACCGAGATGAATCTGATGGACGGAAGAAAGGC 884
consensus_9277#3 CTTCTCAGGTTGCTTTTCCACTTCTTCTACCTGAGTTTAGTGTAATCGATGCGGC----- 858
consensus_9277#0 CATCTTAATTGACGTGCAAAGGCGCTGGTGCGTCATTTGCTGCTGCTGCTCGATCATTGC 949
consensus_9277#1 ATATTTATTGAATAAATAGACTTTTTAAGAAATAATAAAATACCAACNAAAAGCAGGCAT 911
consensus_9277#5 ------------------------------------------------------------
consensus_9277#4 -----------------------------
consensus_9277#6 -----------------------------
consensus_9277#2 TTACGCGAAAGGANGGAACTTGTTGTGAT 913
consensus_9277#3 -----------------------------
consensus_9277#0 CCGACTCTAGGGGAAGGCA---------- 968
consensus_9277#1 GT--------------------------- 913
consensus_9277#5 -----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||