These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9280#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1325 fasta sequence [TACGCATCACACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGGAGC-C-TTGGAAAG-AAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGATACATACTGGCAGAACCCGATCCTCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC-GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA-GGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTG-AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCCCATAA] [+] EMBL CNS09Q0X [TACGCATCACACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGGAGC C TTGGAAAG AAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGATACATACTGGCAGAACCCGATCCTCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGAGGGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGGGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTC ] [+] EMBL CNS09JDB [ ATCACACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCCCAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGTAGCGCTTTGGAAAGCAAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGATACATACTGGCAGAACCCGATCCTCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA GGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGGACAAGGACCGTGTGAATAAAACGCTGAAGG GCTGAAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACG ] [-] EMBL CNS08XCV [ CCCGATCCGCACGCAACGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGAACTGTCGCCGAACGCGGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCAACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGA GGGGGACACGCTCGGCTTTCTGATCAAACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGGCCGTGTGAATGAAACGCTGAAGGCGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTGGTAACATTG ] [-] EMBL CNS09CRB [ GATCCTCACGCCACGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCAACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATT ] [-] EMBL CNS09Q0Y [ TTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCT GCTGTATCGAGTGTTGTCGCCGAACGCTGTG TGATCGCATTG ACGGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCAACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGCCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACAACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA GGGGGACACGCTCGGATTTCTGATCAAACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGGGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGATACCTACAGCATCTAAATGGCGATCATGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAACATgc ] [-] EMBL CNS09JDC [ AAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCCACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCCTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA GGGGGAAACGCTCGGATTT ] [-] EMBL CNS08RY2 [ GCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCCACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGA GGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTATAACATTGCCCCATAA] [+] EMBL CNS09CRA [ AAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA GGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAA ] [-] EMBL CNS08XLV [ ATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGA GGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCTAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTG ] consensusID : consensus_9280#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1208 fasta sequence [TCTCCCTAGCGTGGTTAGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGGAGCCTTGGAAAGAAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCTGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCGAGATAAAAAAAA] [+] EMBL CNS08QKG [TCTCCCTAGCGTGGTTAGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGGAGCCTTGGAAAGAAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCTGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTG ] [-] EMBL CNS08QKH [ TGCCAGCCCACGGCTACCCGGTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGAACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCAACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCAAACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCGAGATAAAAAAAA] [+] EMBL BX615428 [ AAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGGTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAAC ] consensusID : consensus_9280#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 957 fasta sequence [ACTGGAGTTGCTATTATT-CCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAG-ACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGGCCGTGTGAATGAAACGCTGAAGGGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGA] [+] EMBL CNS08RY1 [ACTGGAGTTGCTATTATTCCCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAG ACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCAT ] [+] EMBL CNS08XCU [ GAGTTGCCCCTATT CCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAG ACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGGCCGTGTGAATGAAACGCTGAAGGGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGA] [+] EMBL CNS08XLU [ ATT CCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGCACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACaa ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9280#0 -------------------------------------------TACGCATCACACTTGTA 17 consensus_9280#1 ------------------------------------------------------------ consensus_9280#2 ACTGGAGTTGCTATTATTCCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTA 60 consensus_9280#0 CGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTT 77 consensus_9280#1 -------------TCTCCCTAGCGTGGTTA-GGTGTTTTGTGCTGTTATATTTTGTTGTT 46 consensus_9280#2 CGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTT 120 *********** ***************************** consensus_9280#0 TTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTC 137 consensus_9280#1 TTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTC 106 consensus_9280#2 TTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTC 180 ************************************************************ consensus_9280#0 TAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGG 197 consensus_9280#1 TAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGG 166 consensus_9280#2 TAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGG 240 ************************************************************ consensus_9280#0 AAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCC 257 consensus_9280#1 AAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCC 226 consensus_9280#2 AAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCC- 299 *********************************************************** consensus_9280#0 AACAGTGAGCAAAGCGGAGCCTTGGAAAGAAGAGCCGCCTCGGCACGGATGTCGGTGCGC 317 consensus_9280#1 AACAGTGAGCAAAGCGGAGCCTTGGAAAGAAGAGCCGCCTCGGCACGGATGTCGGTGCGC 286 consensus_9280#2 ------------------------------------------------------------ consensus_9280#0 TGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACC 377 consensus_9280#1 TGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACC 346 consensus_9280#2 -------------AGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACC 346 *********************************************** consensus_9280#0 GATACATACTGGCAGAACCCGATCCTCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCG 437 consensus_9280#1 GGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCTGCAAGAGTTTGACGAAAGCG 406 consensus_9280#2 GGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCG 406 * *********************** ************* ******************** consensus_9280#0 CTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTG 497 consensus_9280#1 CTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGG 466 consensus_9280#2 CTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGG 466 ******************************************* ************* * consensus_9280#0 TGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGA 557 consensus_9280#1 TGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGA 526 consensus_9280#2 TGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGA 526 ************************************************************ consensus_9280#0 TAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCT 617 consensus_9280#1 TAACGGGCGAGAAGGGTTACTGCATGGCAC------------------------------ 556 consensus_9280#2 TAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCT 586 ******************* ********** consensus_9280#0 GGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGG 677 consensus_9280#1 ------------------------------------------------------------ consensus_9280#2 GGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGG 646 consensus_9280#0 GACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGC 737 consensus_9280#1 ---AGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGC 613 consensus_9280#2 GACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGC 706 ********************************************************* consensus_9280#0 GGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATG 797 consensus_9280#1 GGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATG 673 consensus_9280#2 GGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATG 766 **************************************** ******** ********** consensus_9280#0 GCGAGGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGG 857 consensus_9280#1 GCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGG 733 consensus_9280#2 GCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGG 826 ******************* **************************************** consensus_9280#0 CATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGG 917 consensus_9280#1 CATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGG 793 consensus_9280#2 CATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGG 886 ********************************************** ************* consensus_9280#0 ACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTC 977 consensus_9280#1 ACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTC 853 consensus_9280#2 ACAAGGGCCGTGTGAATGAAACGCTGAAGG-GCTGAAAGTGCAGCCGGGCAGTAAGATTC 945 ****** *********************** ***************************** consensus_9280#0 ACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCT 1037 consensus_9280#1 ACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCT 913 consensus_9280#2 ACTATTTTAAGA------------------------------------------------ 957 ************ consensus_9280#0 ACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAAT 1097 consensus_9280#1 ACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAAT 973 consensus_9280#2 ------------------------------------------------------------ consensus_9280#0 TTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAG 1157 consensus_9280#1 TTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAG 1033 consensus_9280#2 ------------------------------------------------------------ consensus_9280#0 AAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGC 1217 consensus_9280#1 AAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGC 1093 consensus_9280#2 ------------------------------------------------------------ consensus_9280#0 TTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATA 1277 consensus_9280#1 TTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATA 1153 consensus_9280#2 ------------------------------------------------------------ consensus_9280#0 AACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCCC-ATAA------ 1325 consensus_9280#1 AACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCGAGATAAAAAAAA 1208 consensus_9280#2 ------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||