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Anopheles gambiae
cluster # 9295 cluster # 9295       Sequences # 15       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9295#0 length = 1457 sequences # 13  
consensus_9295#1 length = 774 sequences # 1  
consensus_9295#2 length = 679 sequences # 1  

consensusID : consensus_9295#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1457
fasta sequence
                              [GCAGAATCGCGCACGAGGTTGCGATACCGACTGGGAAACGACACAGCCAGATTTCCTCTACGCCAACTCGTACGGTGGAGACAATATAATTGACATCGAAGAGTTTATCGATCCCAGCGTCTTTATGAGCGGCAACCATCATCATCTCATGAGCGGCAATAACAACAACAACAACAACAACAACAATGGTACCAGCGGAGGCCCC-AACACACTGTCCCAGTATCCGATCAACCCGTGGGAATGCTCGCAGGTCGAAATCGAGGAGCTG-TCGGCGGACTTTAACGATCCCTCGCTCGAGCCGGAAGCGGACCAGCAGACGAGCCTGATGTCGGAGTCGGACACCCTGCT-GCTGAGCAAACCGGCCTC-GTCCTACTCGATCGAGATGTAAATCGTGTGTCGGTACA-GAGCCAGA-CTT-TTT--CT-GAT-GGCATGAAACA-GAAAACC-CAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGC-AGGCAAAG-GAG-AATC-GGGGGTGCCTTACCTACTACTA-GTACTACTAC--AA-CAA-CTAC-TACTACTACT-AACACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTCCCACGAAAGCAAAATCGTGCAACGGAAACGTG-TTACCG-GAATGATATTACCATTTAGTAGCGACCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGTCCCACCGCGCGCTCCCTTCCGTGCGTGCCTGCCATGGTGTGGTGGAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGCCAAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCGAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT-GTTGTATTTTTGTGGAATCGAGCATG-CAGCGCCAGCCTTTACCAAAA-CAGATTGTC-TGAGGACGAG-CTGCAAGCGCTGAAGATGGCATGATCGGACGATCGCGTAATAATGGTGCATAGCTAATTTTAACCCTTAGAATTATTTTTTATTTTAGCTCCCTTCTCTCTCTCACACACACTCTCTTTTTATCATTCAATCATTCTCTGTACAATATACCATTCTCCCTGCTGGTGTGGAGAATTTTTAAGTGTAAAAAATAATCGCAAAAAATCATACAAAAAAAAGAGATAATAATTCGTACACAGCTTAAGACAGCTTG]

[+] EMBL BX468821             [GCAGAATCGCGCACGAGGTTGCGATACCGACTGGGAAACGACACAGCCAGATTTCCTCTACGCCAACTCGTACGGTGGAGACAATATAATTGACATCGAAGAGTTTATCGATCCCAGCGTCTTTATGAGCGGCAACCATCATCATCTCATGAGCGGCAATAACAACAACAACAACAACAACAACAATGGTACCAGCGGAGGCCCCGAACACACTGTCCCAGTATCCGATCAACCCGTGGGAATGCTCGCAGGTCGAAATCGAGGAGCTGTTCGGCGGACTTTAACGATCCCTCGCTCGAGCCGGAAGCGGACCAGCAGACGAGCCTGATGTCGGAGTCGGACACCCTGCTGGCTGAGCAAACCGGCCTCGGTCCTACTCGATCGAGATGTAAATCGTGTGTCGGTACAGGAGCCAGAGCTTGTTTGCCTGGATGGGCATGAAACAGGAAAACCGCAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGCAAGGCAAAGCGAGAAATCGGGGGGTGCCTTACCTACTACTAGGTACTACTACCAAAGCAAGCTACATACTACTACTAAACACTGCTACTGCTGGCTCTCGTtcta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM584651             [                                                                                                                                                                                              ccgAGCGGAGGCCCC AACACACTGTCCCAGTATCCGATGAACCCGTGGGAATGCTCGCAGGTCGAAATCGAGGAGCTG TCGGCGGACTTTAACGATCCCTCGCTCGAGCCGGAAGCGGACCAGCAGACGAGCCTGATGTCGGAGTCGGCCACCCTGCT GCTGAGCAAACCGCCCTC GTCCTACTCGATCGAGATGTAAATCGTGTGTCGGTACA GAGCCAGA CTT TTT  CT GAT GGCATGAAACA GAAAACC CAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGC AGGCAAAG GAG AATC GGAGGTGCCTTACCTACTACTA GTACTACTAC  AA CAA CAAC TACTACTACT AACACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTCCCACGAAAGCAAAATCGTGCAACGGAAACGTG TTACCG GAATGATATTACCATTTAGTAGCGACCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGCCCCAC  CGCGCTCCCTTCCGTGCGTGTCTGCCATGGTGTGGTGAAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGCCAAGAGAGCAACCCGACCAGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM619367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgATGAAACA GAAAACC CAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGC AGGCAAAC GAG AATC GGGGGTGCCTTACCTACTACTA GTACTACTAC  AA CAA CTAC TACTACTACT AACACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTCCCACGAAAGCAAAATCGTGCAACGGAAACGTG TTACCG GAATGATATTACCATTTAGTAGCGACCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGTCCCACCGCGCGCTCCCTTCCGTGCGTGCCTGCCATGGTGTGGTGGAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGCCAAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCGAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGG                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM575422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cc gATC GGGGGTGCCTTACCTACTACTA GTACTACTAC  AA CAA CTAC TACTACTACT AACACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTCCCACGAAAGCAAAATCGTGCAACGGAAACGTG TTACCG GAATGATATTACCATTTAGTAGCGACCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGTCCCACCGCGCGCTCCCTTCCGTGCGTGCCTGCCATGGTGTGGTGGAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGCCAAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCGAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGTGGTTGTATTTTTGTGGAATCGAGCATG CAGCGCCAGCC                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX624857             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTCCCACGAAAGCAAAATCGTGCAACGGAAACGTG TTACCG GAATGATATTACCATTTAGTAGCGACCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGTCCCACCGCGCGCTCCCTTCCGTGCGTGCCTGCCATGGTGTGGTGGAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGCCAAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCGAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT GTTGTATTTTTGTGGAATCGAGCATG CAGCGCCAGCCTTTACCAAAA CAGATTGTC TGAGGACGAG CTGCAAGCGCTGAAGATGGCATGATCGGACGATCGCGTAATAATGGTGCATAGCTAATTTTAACCCTTAGAATTATTTTTTATTTTAGCTCCCTTCTCTCTCTCACACACACTCTCTTTTTATCATTCAATCATTCTCTGTACAATATACCATTCTCC                                                                                               ]
[+] EMBL BX619065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTGCTTACCGCGAATGATATTACCATTTAGTAGCGACCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGTCCCACCGCGCGCTCCCTTCCATGCGTGCCTGCCATGGTGTGGTGGAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGTCAAGAGAGCAAACCTACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCGAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT GTTGTATTTTT                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX621074             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGTGACGCCAAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCGAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT GTTGTATTTTTGTGGAATCGAGCATG CAGCGCCAGCCTTTACCAAAA CAGATTGTC TGAGGACGAG CTGCAAGCGCTGAAGATGGCATGATCGGACGATCGCGTAATAATGGTGCATAGCTAATTTTAACCCTTAGAATTATTTTTTATTTTAGCTCCCTTCTCTCTCTCACACACACTCTCTTTTTATCATTCAATCATTCTCTGTACAATATACCATTCTCCCTGCTGGTGTGGAGAATTTTTANGTGTAAAAAATAATCGCAA                                                     ]
[+] EMBL BM585403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgGTGCCATTGCTCGTACACTCGATTGGCGAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT GTTGTATTTTTGTGGAATCGAGCATG C                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX621888             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT GTTGTATTTTTGTGGAATCGAGCATG CAGCGCCAGCCTTTACCAAAA CAGATTGTC TGAGGACGAG CTGCAAGCGCTGAAGATGGCATGATCGGACGATCGCGTAATAATGGTGCATAGCTAATTTTAACCCTTAGAATTATTTTTTATTTTAGCTCCCTTCTCTCTCTCACACACACTCTCTTTTTATCATTCAATCATTCTCTGTACAATATACCATTCTCCCTGCTGGTGTGGAGAATTTTTAAGTGTAAAAAATAAT                                                          ]
[+] EMBL BX619930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT GTTGTATTTTTGTGGAATCGAGCATGCCAGCGCCAGCCTTTACCAAAACCAGATTGTCNTGAGGACGAGCCTGCAAGCGCTGA                                                                                                                                                                                                                                                ]
[+] EMBL BX615033             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACGCCTACAGAGCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT GTTGTATTTTTGTGGAATCGAGCATG CAGCGCCAGCCTTTACCAAAA CAGATTGTC TGAGGACGAG CTG                                                                                                                                                                                                                                                          ]
[+] EMBL BM594756             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        cCGCGGATTAGTAGAGGAGCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT GTTGTATTTTTGTGGAATCGAGCATG CAGCGCCAGCCTTTACCAAAA CAGATTGTC TGAGGACGAG CTGCAAGCGCTGAAGATGGCATGATCGGACGATCGCGTAATAATGGTGCATAGCTAATTTTAACCCTTAGAATTATTTTTTATTTTAGCTCCCTTCTCTCTCTCACACACACTCTCTTTTTATCATTCAATCATTCTCTGTACAATATACCATTCTCCCTGCTGGTGTGGAGAATTTTTAAGTGTAAAAAATAATCGCAAAAAATCATACAAAAAAAAGAGATAATAATTCGTACACAGCTTAAGACAGCTTG]
[+] EMBL BX618762             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGT GTTGTATTTTTGTGGAATCGAGCATG CAGCGCCAGCCTTTACCAAAA CAGATTGTC TGAGGACGAG CTGCAAGCGCTGAAGATGGCATGATCGGACGATCGCGTAATAATGGTGCATAGCTAATTTTAACCCTTAGAATTATTTTTTATTTTAGCTCCCTTCTCTCTCTCACACACACTCTCTTTTTATCAT                                                                                                                               ]


>consensus_9295#0 GCAGAATCGCGCACGAGGTTGCGATACCGACTGGGAAACGACACAGCCAGATTTCCTCTA CGCCAACTCGTACGGTGGAGACAATATAATTGACATCGAAGAGTTTATCGATCCCAGCGT CTTTATGAGCGGCAACCATCATCATCTCATGAGCGGCAATAACAACAACAACAACAACAA CAACAATGGTACCAGCGGAGGCCCCAACACACTGTCCCAGTATCCGATCAACCCGTGGGA ATGCTCGCAGGTCGAAATCGAGGAGCTGTCGGCGGACTTTAACGATCCCTCGCTCGAGCC GGAAGCGGACCAGCAGACGAGCCTGATGTCGGAGTCGGACACCCTGCTGCTGAGCAAACC GGCCTCGTCCTACTCGATCGAGATGTAAATCGTGTGTCGGTACAGAGCCAGACTTTTTCT GATGGCATGAAACAGAAAACCCAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGCAGGCA AAGGAGAATCGGGGGTGCCTTACCTACTACTAGTACTACTACAACAACTACTACTACTAC TAACACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTC CCACGAAAGCAAAATCGTGCAACGGAAACGTGTTACCGGAATGATATTACCATTTAGTAG CGACCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGTCCCACCGCGCGCTCCCTTCCGT GCGTGCCTGCCATGGTGTGGTGGAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGCCAAG AGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCGAGAGAG AGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAA CGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGA GCCAGGTGTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTG CACGTAGGCAGGAACCTATCGTATTTTGCTCTGGTGACGGTCAGCTGAGGCTCAATCGAT CCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAGCGTACCTAGAGTATTGTGT TGTATTTTTGTGGAATCGAGCATGCAGCGCCAGCCTTTACCAAAACAGATTGTCTGAGGA CGAGCTGCAAGCGCTGAAGATGGCATGATCGGACGATCGCGTAATAATGGTGCATAGCTA ATTTTAACCCTTAGAATTATTTTTTATTTTAGCTCCCTTCTCTCTCTCACACACACTCTC TTTTTATCATTCAATCATTCTCTGTACAATATACCATTCTCCCTGCTGGTGTGGAGAATT TTTAAGTGTAAAAAATAATCGCAAAAAATCATACAAAAAAAAGAGATAATAATTCGTACA CAGCTTAAGACAGCTTG



consensusID : consensus_9295#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 774
fasta sequence
                              [AGGTTATAGTAGCGACCAAAGTTACTTTTCTTGAGGGTGGCTGCAGTGGTCCCACCGCGCGCTCCCTTCCGTGCGTGCCTGCCATGGTGTGGTGGAGTGCTGTAAGCTTCAAAAGCCAAAGCGTGACTGCCAAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCGACGCAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGACGCGGATTAGCTAGAGGAGCCAGCGTGTTTATGGAAACGCATAATAGCTGCGAAGCGCTGAACTAGCTAGTGAACAGGTATTTTGCGACGTAGTGCNCGGAACCTATCGTATTCTCTGCTCTTGGCTGACGCGCTCACCCTGAGCGCTCAATCGGATNCCACAGGGNCATGNTACCTAGCGCTGNCTGTCCTATTGGAACCACCCGGGCANAAGCGTTACCCTAACNACTACTCGCGTCGCTATACACCGANGGGCANTCGCAGAGCCATGCCANNCGCCCGAAGACCCCTATTTAACNCCAAANAGAACACGGAATTNGGTCCTTGGANGNACGCAAGGCTTGCCAAGGCGCTTGACACGCATTGGGCCACTTGCANTCNGGGCACGACTNCGCCGTNNACTAAACATGGGCTGCACATACGCCTAAACTCTTNAACCCCCCTCTTAAGCCACTANCATATACACACAACNAC]

[+] EMBL AL695332             [AGGTTATAGTAGCGACCAAAGTTACTTTTCTTGAGGGTGGCTGCAGTGGTCCCACCGCGCGCTCCCTTCCGTGCGTGCCTGCCATGGTGTGGTGGAGTGCTGTAAGCTTCAAAAGCCAAAGCGTGACTGCCAAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCGACGCAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGACGCGGATTAGCTAGAGGAGCCAGCGTGTTTATGGAAACGCATAATAGCTGCGAAGCGCTGAACTAGCTAGTGAACAGGTATTTTGCGACGTAGTGCNCGGAACCTATCGTATTCTCTGCTCTTGGCTGACGCGCTCACCCTGAGCGCTCAATCGGATNCCACAGGGNCATGNTACCTAGCGCTGNCTGTCCTATTGGAACCACCCGGGCANAAGCGTTACCCTAACNACTACTCGCGTCGCTATACACCGANGGGCANTCGCAGAGCCATGCCANNCGCCCGAAGACCCCTATTTAACNCCAAANAGAACACGGAATTNGGTCCTTGGANGNACGCAAGGCTTGCCAAGGCGCTTGACACGCATTGGGCCACTTGCANTCNGGGCACGACTNCGCCGTNNACTAAACATGGGCTGCACATACGCCTAAACTCTTNAACCCCCCTCTTAAGCCACTANCATATACACACAACNAC]


>consensus_9295#1 AGGTTATAGTAGCGACCAAAGTTACTTTTCTTGAGGGTGGCTGCAGTGGTCCCACCGCGC GCTCCCTTCCGTGCGTGCCTGCCATGGTGTGGTGGAGTGCTGTAAGCTTCAAAAGCCAAA GCGTGACTGCCAAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTC GATTGGCGACGCAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATAT CAAAAGACTTAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGA CGCGGATTAGCTAGAGGAGCCAGCGTGTTTATGGAAACGCATAATAGCTGCGAAGCGCTG AACTAGCTAGTGAACAGGTATTTTGCGACGTAGTGCNCGGAACCTATCGTATTCTCTGCT CTTGGCTGACGCGCTCACCCTGAGCGCTCAATCGGATNCCACAGGGNCATGNTACCTAGC GCTGNCTGTCCTATTGGAACCACCCGGGCANAAGCGTTACCCTAACNACTACTCGCGTCG CTATACACCGANGGGCANTCGCAGAGCCATGCCANNCGCCCGAAGACCCCTATTTAACNC CAAANAGAACACGGAATTNGGTCCTTGGANGNACGCAAGGCTTGCCAAGGCGCTTGACAC GCATTGGGCCACTTGCANTCNGGGCACGACTNCGCCGTNNACTAAACATGGGCTGCACAT ACGCCTAAACTCTTNAACCCCCCTCTTAAGCCACTANCATATACACACAACNAC



consensusID : consensus_9295#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence
                              [CCGCGGACGCGTGGGCGAGATGTAAATCGTGTGTCGGTACAGAGCCAGACTTTTTCTGATGGCATGAAACAGAAAACCCAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGCAGGCAAAGGAGAATCGGAGGTGCCTTACCTACTACTAGTACTACTACAACAACAACTACTACTACTAACACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTCCCACGAAAGCAAAATCGTGCAACGGAAACGTGTTACCGGAATGATATTACCATTTAGTAGCGACCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGCCCCACCGCGCTCCCTTCCGTGCGTGTCTGCCATGGTGTGGTGAAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGCCAAGAGAGCAACCCGACCAGCCCCGCGCGTGTGCCATTGCTCGTACACTCGATTGGCGCGAGAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACAGATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCACGGTTTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACATAGGCAGGAACCTAT]

[+] EMBL BM611891             [CCGCGGACGCGTGGGCGAGATGTAAATCGTGTGTCGGTACAGAGCCAGACTTTTTCTGATGGCATGAAACAGAAAACCCAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGCAGGCAAAGGAGAATCGGAGGTGCCTTACCTACTACTAGTACTACTACAACAACAACTACTACTACTAACACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTCCCACGAAAGCAAAATCGTGCAACGGAAACGTGTTACCGGAATGATATTACCATTTAGTAGCGACCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGCCCCACCGCGCTCCCTTCCGTGCGTGTCTGCCATGGTGTGGTGAAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGCCAAGAGAGCAACCCGACCAGCCCCGCGCGTGTGCCATTGCTCGTACACTCGATTGGCGCGAGAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAACGTTTACATAGAGAGAAACAGATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAGCCACGGTTTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTGCACATAGGCAGGAACCTAT]


>consensus_9295#2 CCGCGGACGCGTGGGCGAGATGTAAATCGTGTGTCGGTACAGAGCCAGACTTTTTCTGAT GGCATGAAACAGAAAACCCAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGCAGGCAAAG GAGAATCGGAGGTGCCTTACCTACTACTAGTACTACTACAACAACAACTACTACTACTAA CACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTCCCA CGAAAGCAAAATCGTGCAACGGAAACGTGTTACCGGAATGATATTACCATTTAGTAGCGA CCAAAGTTACCTTTTCTTGAGGGTGGCGCAGTGGCCCCACCGCGCTCCCTTCCGTGCGTG TCTGCCATGGTGTGGTGAAGGCAGTAAGCTTCAAAAGCCAAAGCGTGACGCCAAGAGAGC AACCCGACCAGCCCCGCGCGTGTGCCATTGCTCGTACACTCGATTGGCGCGAGAGAGAGA GAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACTTAGCAAAC GTTTACATAGAGAGAAACAGATACACTTACACGCCTACAGAGCGCGGATTAGTAGAGGAG CCACGGTTTTTTGGAAACGATAATAGCTGCAAGCGCTGAACTAGTAGGAAAGGTATTTTG CACATAGGCAGGAACCTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9295#0      GCAGAATCGCGCACGAGGTTGCGATACCGACTGGGAAACGACACAGCCAGATTTCCTCTA 60
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      CGCCAACTCGTACGGTGGAGACAATATAATTGACATCGAAGAGTTTATCGATCCCAGCGT 120
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      CTTTATGAGCGGCAACCATCATCATCTCATGAGCGGCAATAACAACAACAACAACAACAA 180
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      CAACAATGGTACCAGCGGAGGCCCCAACACACTGTCCCAGTATCCGATCAACCCGTGGGA 240
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      ATGCTCGCAGGTCGAAATCGAGGAGCTGTCGGCGGACTTTAACGATCCCTCGCTCGAGCC 300
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      GGAAGCGGACCAGCAGACGAGCCTGATGTCGGAGTCGGACACCCTGCTGCTGAGCAAACC 360
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      GGCCTCGTCCTACTCGATCGAGATGTAAATCGTGTGTCGGTACAGAGCCAGACTTTTTCT 420
consensus_9295#2      --CCGCGGAC-GCGTGGGCGAGATGTAAATCGTGTGTCGGTACAGAGCCAGACTTTTTCT 57
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      GATGGCATGAAACAGAAAACCCAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGCAGGCA 480
consensus_9295#2      GATGGCATGAAACAGAAAACCCAAGCGGCGCGCGCGCCCGACGCGTGAATGGCGCAGGCA 117
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      AAGGAGAATCGGGGGTGCCTTACCTACTACTAGTACTACTACAACAACTACTACTACTAC 540
consensus_9295#2      AAGGAGAATCGGAGGTGCCTTACCTACTACTAGTACTACTACAACAACAACTACTACTAC 177
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      TAACACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTC 600
consensus_9295#2      TAACACTGCTACTGCTGGCTCTCGTCTGGACGAGACAGAATGTGGGGCCGCTTGGCACTC 237
consensus_9295#1      ------------------------------------------------------------
                                                                                  

consensus_9295#0      CCACGAAAGCAAAATCGTGCAACGGAAACGTGTTACCGGAATGATATTACCATTTAGTAG 660
consensus_9295#2      CCACGAAAGCAAAATCGTGCAACGGAAACGTGTTACCGGAATGATATTACCATTTAGTAG 297
consensus_9295#1      ------------------------------------------------AGGTTATAGTAG 12
                                                                      *   * ******

consensus_9295#0      CGACCAAAGTTACCTTTTCTTGAGGGTGGC-GCAGTGGTCCCACCGCGCGCTCCCTTCCG 719
consensus_9295#2      CGACCAAAGTTACCTTTTCTTGAGGGTGGC-GCAGTGGCCCCACCGCGC--TCCCTTCCG 354
consensus_9295#1      CGACCAAAGTTAC-TTTTCTTGAGGGTGGCTGCAGTGGTCCCACCGCGCGCTCCCTTCCG 71
                      ************* **************** ******* **********  *********

consensus_9295#0      TGCGTGCCTGCCATGGTGTGGTGGAG-GCAGTAAGCTTCAAAAGCCAAAGCGTGAC-GCC 777
consensus_9295#2      TGCGTGTCTGCCATGGTGTGGTGAAG-GCAGTAAGCTTCAAAAGCCAAAGCGTGAC-GCC 412
consensus_9295#1      TGCGTGCCTGCCATGGTGTGGTGGAGTGCTGTAAGCTTCAAAAGCCAAAGCGTGACTGCC 131
                      ****** **************** ** ** ************************** ***

consensus_9295#0      AAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCG--- 834
consensus_9295#2      AAGAGAGCAACCCGACCAGCCCCGCGCGTGTGCCATTGCTCGTACACTCGATTGGCGCGA 472
consensus_9295#1      AAGAGAGCAAACCGACCAGCCCCGCGTGTGTGCCATTGCTCGTACACTCGATTGGCG--A 189
                      ********** *************** ******************************   

consensus_9295#0      -AGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACT 893
consensus_9295#2      GAGAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACT 532
consensus_9295#1      CGCAGAGAGAAAGATACGCGGGACCAAAAGCGCAGAGACTTCTCACCATATCAAAAGACT 249
                         *********************************************************

consensus_9295#0      TAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAG-CGCGGATTA 952
consensus_9295#2      TAGCAAACGTTTACATAGAGAGAAACAGATACACTTACACGCCTACAGAG-CGCGGATTA 591
consensus_9295#1      TAGCAAACGTTTACATAGAGAGAAACACATACACTTACACGCCTACAGAGACGCGGATTA 309
                      *************************** ********************** *********

consensus_9295#0      G-TAGAGGAGCCA-GGTGTTT-TGGAAACG-ATAATAGCTGC-AAGCGCTGAACTAGTAG 1007
consensus_9295#2      G-TAGAGGAGCCACGGTTTTT-TGGAAACG-ATAATAGCTGC-AAGCGCTGAACTAGTAG 647
consensus_9295#1      GCTAGAGGAGCCAGCGTGTTTATGGAAACGCATAATAGCTGCGAAGCGCTGAACTAGCTA 369
                      * ***********  ** *** ******** *********** **************   

consensus_9295#0      G---AAAGGTATTTTGC-ACGTAG-GCA-GGAACCTATCGTATTTTGCTCTGGTGACGGT 1061
consensus_9295#2      G---AAAGGTATTTTGC-ACATAG-GCA-GGAACCTAT---------------------- 679
consensus_9295#1      GTGAACAGGTATTTTGCGACGTAGTGCNCGGAACCTATCGTATTCTCTGCTCTTGGCTGA 429
                      *   * *********** ** *** **  *********                      

consensus_9295#0      CAGCTGAGGCTCAATCGATCCACGGTATGTAGTGCGTGGTGTATATGGAACCACCGGAAG 1121
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      CGCGCTCACCCTGAGCGCTCAATCGGATNCCACAGGGNCATGNTACCTAGCGCTGNCTGT 489
                                                                                  

consensus_9295#0      CGTACCTAGAGTATTGTGTTGTATTTTTGTGGAATCGAGCATGCAGCGCCAGCCTTTACC 1181
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      CCTATTGGAACCACCCGG--GCANAAGCGTTACCCTAACNACTACTCGCGTCGCTATACA 547
                                                                                  

consensus_9295#0      AAAACAGATTGTCTGAGGACGAGCTGCAAGCGCTGAAGATGGCATGATCGGACGATCGCG 1241
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      CCGANGGGCANTCGCAGAGCCATGCCANNCGCCCGAAGAC--CCCTATTTAACNCCAAAN 605
                                                                                  

consensus_9295#0      TAATAATGGTGCATAGCTAATTTTAACCCTTAGAATTATTTTTTATTTTAGCTCCCTTCT 1301
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      AGAACACGGAATTNGGTCCTTGGANGNACGCAAGGCTTGCCAAGGCGCTTGACACGCATT 665
                                                                                  

consensus_9295#0      CTCTCTCACACACACTCTCTTTTTATCATTCAATCATTCTCTGTACAATATACCATTCTC 1361
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      GGGCCACTTGCANTCNGGGCACGACTNCGCCGTNNACTAAACATGGGCTGCACATACGCC 725
                                                                                  

consensus_9295#0      CCTGCTGGTGTGGAGAATTTTTAAGTGTAAAAAATAATCGCAAAAAATCATACAAAAAAA 1421
consensus_9295#2      ------------------------------------------------------------
consensus_9295#1      TAAACTCTTNAACCCCCCTCTTAAGCCACTANCATATACACACAACNAC----------- 774
                                                                                  

consensus_9295#0      AGAGATAATAATTCGTACACAGCTTAAGACAGCTTG 1457
consensus_9295#2      ------------------------------------
consensus_9295#1      ------------------------------------
                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)