These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9296#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1481 fasta sequence [CGAGGCCANGAATCCGCACGAGTGTACGCAAGTACATATCCAAGCACGGCAAAAGATCATATTATTAATCACATTAAATCATATTCAAAAGCTACAGCTTTGGAAGGTCTAAAGCTCCGGTCCGTGGGCTAGTAGGCTANGGCAAGAGGCCGAGAAGGCTGTTGGAACGGCTTGGGGTTAAATCGAGTACTCGAGCAGNAAGTAGGGAAACCGGAAAAGAGGCCTAANAGCCCGGGTACTAAGCTCGCCGTTTGGTGNAGCGTACGAGAGGAAGAGCAGTAGATGNCGAATGCAGGGTTCACGCGAACGGGGCNNAGGGNTGCACATGCACCTCTTANTGCAGTCGCGACNGCGAATTGCACTTANCGCCNCTCTGTGGACACCTGNCAACGGGATCACAGAACACAAAGGGNGTTGCCCACCAAAAGTTTTCGGGGGGTACGTGGCNNCCCGAGGAAAAGNGATCTGCCACAGTAAAGCNCCCAACGNGTTGGGNGNCGGGNCNCGCGAGGAAGGGGTAAANAGCCCAAGGGCAAAGGTGAGGCACACGAGAACGTGTNGAAGTTACAGANCCGGGGGGGTANATACACATGTGCGANNAANGNNCNGCCATAGGGTATNTTACGCNAAAGNGCCACAATGCNCCTGNNANGAAGGGGGGCCNAACGGGATANGACNGGGAGGGGNTTGGACGCNGAGNCNTGGGGGAGGTGCGCGAGACNCACGGGTANTNGTAGCGTGAGCGACTNGTATAGGCCCACGAGGTGAGGAGCCCAAGGCAGCNGACCGGCNAGGCGANAACAGGGCGGGCGAGGGACGCNCGGCAGGANTANACCAGAATGCNANGGAAAGGTGCNGGGGCNAGACATANNGGACGAGCATGAAGCGNGCCNGAGCGGANGNGCCNGNCAAGCACNGGNNGCGGCAAANNNGCCNCTCGACGGAGNNNACACCACGCGGNNCNGGGNGANGAGTGGGGGGAACGGCGNGANAGCNACAGCAGGNCGNGGGGTAGCGGGTGCGNNGAGTGCACACAACAGAGNNGTGTGGCTCACGGAGATCGANGGNNGCNGNCGGGGACGGGGCNNCGACNCAGGGGGNAAGTGCGCNNAGCACGGNGCNNCGNCGGNGAANAGGCGGAGCGAGCNNGNGNGGCGTGAGGTACNGAGAGANNNGCATGNGGAANAGCANCGGNGCGCACGACCGATAGAGAGCAGNCNNCNGAGCAAGNCACTGCCGACNACGACCGGCGCGAGNCAGAGGCACANGANAGAGGGNNANNCGCCAGANGAANGGAANNATGGGCGCNACGCCNCGNNACCGCGAACACCNGNCNGCNNCCACNCNGANAGCANNNACGGNACANAGNCNNCNCGNAAGNCAGCGCGAGGNGGGNGNCGNTCGAGCGAAGCTANGAGACAGAGNGAGCANCGAGNCCNAACGCCGNGGACCGGGCGGCNAAACAGCAGNCNGTAGCCGGC] [+] EMBL BX469693 [CGAGGCCANGAATCCGCACGAGTGTACGCAAGTACATATCCAAGCACGGCAAAAGATCATATTATTAATCACATTAAATCATATTCAAAAGCTACAGCTTTGGAAGGTCTAAAGCTCCGGTCCGTGGGCTAGTAGGCTANGGCAAGAGGCCGAGAAGGCTGTTGGAACGGCTTGGGGTTAAATCGAGTACTCGAGCAGNAAGTAGGGAAACCGGAAAAGAGGCCTAANAGCCCGGGTACTAAGCTCGCCGTTTGGTGNAGCGTACGAGAGGAAGAGCAGTAGATGNCGAATGCAGGGTTCACGCGAACGGGGCNNAGGGNTGCACATGCACCTCTTANTGCAGTCGCGACNGCGAATTGCACTTANCGCCNCTCTGTGGACACCTGNCAACGGGATCACAGAACACAAAGGGNGTTGCCCACCAAAAGTTTTCGGGGGGTACGTGGCNNCCCGAGGAAAAGNGATCTGCCACAGTAAAGCNCCCAACGNGTTGGGNGNCGGGNCNCGCGAGGAAGGGGTAAANAGCCCAAGGGCAAAGGTGAGGCACACGAGAACGTGTNGAAGTTACAGANCCGGGGGGGTANATACACATGTGCGANNAANGNNCNGCCATAGGGTATNTTACGCNAAAGNGCCACAATGCNCCTGNNANGAAGGGGGGCCNAACGGGATANGACNGGGAGGGGNTTGGACGCNGAGNCNTGGGGGAGGTGCGCGAGACNCACGGGTANTNGTAGCGTGAGCGACTNGTATAGGCCCACGAGGTGAGGAGCCCAAGGCAGCNGACCGGCNAGGCGANAACAGGGCGGGCGAGGGACGCNCGGCAGGANTANACCAGAATGCNANGGAAAGGTGCNGGGGCNAGACATANNGGACGAGCATGAAGCGNGCCNGAGCGGANGNGCCNGNCAAGCACNGGNNGCGGCAAANNNGCCNCTCGACGGAGNNNACACCACGCGGNNCNGGGNGANGAGTGGGGGGAACGGCGNGANAGCNACAGCAGGNCGNGGGGTAGCGGGTGCGNNGAGTGCACACAACAGAGNNGTGTGGCTCACGGAGATCGANGGNNGCNGNCGGGGACGGGGCNNCGACNCAGGGGGNAAGTGCGCNNAGCACGGNGCNNCGNCGGNGAANAGGCGGAGCGAGCNNGNGNGGCGTGAGGTACNGAGAGANNNGCATGNGGAANAGCANCGGNGCGCACGACCGATAGAGAGCAGNCNNCNGAGCAAGNCACTGCCGACNACGACCGGCGCGAGNCAGAGGCACANGANAGAGGGNNANNCGCCAGANGAANGGAANNATGGGCGCNACGCCNCGNNACCGCGAACACCNGNCNGCNNCCACNCNGANAGCANNNACGGNACANAGNCNNCNCGNAAGNCAGCGCGAGGNGGGNGNCGNTCGAGCGAAGCTANGAGACAGAGNGAGCANCGAGNCCNAACGCCGNGGACCGGGCGGCNAAACAGCAGNCNGTAGCCGGC] consensusID : consensus_9296#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1188 fasta sequence [TTTTTTGTTTTTTTCAGTTATGCGGTTATACTTAAC-----TTTATAGTTAGGAGCACTGTTACGATTATCACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTTGCGACCCTTTCGCCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC-AGATATTTGGCCATGTACAGCACCATTCGGTTG-GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC--GGTTTAGGCTCTTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTTCTCTGCCTTTGCTAGCTACTAGCCCACGGACGGAGCTTTAGACCTTCCCAAAGCTGTAGCTTTTGAATATGATTTAA] [+] EMBL CNS08CT3 [TTTTTTGTTTTTTTCAGTTATGCGGTTATATTTAAC TTTATAGTTATGAGCACTATTACGATTATCACATGTTGCCTGCATCATCAGAATAGTCGCCCTTTCCTTTACGAACCTTTCTTCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACATTGTTCAACTTCTTGTTTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCCTACACCGTTGCTCGTATTCCTTCCAAAGCGTCGGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGGGTGGCAATTCCTGCTTCCAGGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAGTTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGTAGCGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTTCGCTGACTGCTGTGGGTCGTCAGAAATTCTTCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGCGAGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGCCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTTGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTCGATGTTCTGCGATGAATGAGGTTGCTGTTCTGGCTGGAGTGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAAAGGTATGAAATCCTCCGATGC ] [+] EMBL CNS08Z25 [ TATATTTAAC TTTATAGTTATGAGCACTATTACGATTATCACATGTTGCCTGCATCATCAGAATAGTCGCCCTTTCCTTTACGAACCTTTCTTCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACATTGTTCAACTTCTTGTTTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCCTACACCGTTGCTCGTATTCCTTCCAAAGCGTCGGAT ] [+] EMBL CNS08GC1 [ ATACTTAACATATATTTATAGTTAGGAGCACTGTTACGATTATCACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTTGCGACCCTTTCGCCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTCCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTTTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTGTTTTTAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTTATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTAATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTACTTGTAGCAATGGTATGAAATCCGGCGACGAATGGGA ] [+] EMBL CNS08IUA [ taACATATA TTTATAGTTAGGAGCACTGTTACGATTATCACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTTGCGACCCTTTCGCCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTTTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTCCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTCGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTTTTGTGGTCGTTCAAATGGTATGAAATCCTCCGATGCATA ] [+] EMBL CNS08I9A [ catata TTTATAGTTAGGAGCACTGTTACGATTATCACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTCGCGACCCTTTCGCCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCAGACATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTTTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGAAAGGCTGGTACGAGGTCCTGTTATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTTATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTTATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTTTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGT ] [-] EMBL CNS08IU9 [ CTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTTCTCTGCCTTTGCTAGCTACTAGCCCA ] [-] EMBL CNS08I99 [ TCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGTTTTAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGTTACTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTCCCTATTCTGTCGATATCGATTCACCAAGCGTTCCAACAGCTTCTCTGCCTTTGCTAGCTACTAGCCCACGGACGGAGCTTTAGACCTTCCCAAAGCTGTAGCTTTTGAATATGATTTAA] [-] EMBL CNS08CT2 [ GTTAGCCGTTGCAGCTCATTCGCCCTACACCGTTGCTCGTATTCCTTCCAAAGCGTCGGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGGGTGGCAATTCCTGCTTCCAGGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAGTTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGTAGCGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTTCGCTGACTGCTGTCGGTCGTCAGATATTCTTCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGCCCGGTTATGCTGTAGTATTTCTCG TGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTTGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTCGATGTTCTGCGATGAATGAGGTTGCTGTTCTGGCTGGAGTGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAAAGGTATGAAATCCTCCGATGCATAAGAGTCATGCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACCGGGGTTCAGTCTCGTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTTATCTGCCTTTGCTAGCCACTAGCCCA ] [-] EMBL CNS08GC0 [ TAGTTTCCGTTGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTATTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTTCTCTGCCTTTGCTAGCTACTAGCCCACGGACGGAGCTTTAGACCTTCGCAA ] [-] EMBL BX618665 [ CACGCCGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTTCCTAT ] [-] EMBL BM593334 [ CGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTcgg ] consensusID : consensus_9296#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence [CCCAGGCATNGANTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACCAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGACAGCAGCAGCCCCAATCATCACGCCACCTACCTCCAGTGGATGATCCTGGCAACGAGAAATACTACAGCATAACCGGACCCCGCTTTTCCAACCGAATGGTGCTGTACATGGCCAAATATCTGCGCGGTCTGGTAGGGGAAAAGAAGAGCATCCGCTGTGTGCTGGCCGAATATGAGACGACCGACAGCAGTCAGCGCAAGGCGCGGGAAGCTTTACGCCGTCAGCTCAACACACTGCTTGCTCGGCGTGTACGGGTTTGCGCGAGGGCCGTACGCACCTGAATTATCTGCGCCATGAGATGGACCTGTGCATGAACGCCGATCCGTGGAAGGCAGGAATTGCCACTCGAACGGTGGAACAAGATCGACGAAGCGATACGGTACCTTGTTATACCGCGTACGACCACCGGGACTATCAGACGCTTATGGAAGGAATATGAGCAACGGGTGTAAGGCCGAATGAGCTGAAACGGGCTAACCTAATAGATCTTGGGCATACCACGCATGATCTTCNAACCGCAANCGG] [+] EMBL AL934630 [CCCAGGCATNGANTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACCAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGACAGCAGCAGCCCCAATCATCACGCCACCTACCTCCAGTGGATGATCCTGGCAACGAGAAATACTACAGCATAACCGGACCCCGCTTTTCCAACCGAATGGTGCTGTACATGGCCAAATATCTGCGCGGTCTGGTAGGGGAAAAGAAGAGCATCCGCTGTGTGCTGGCCGAATATGAGACGACCGACAGCAGTCAGCGCAAGGCGCGGGAAGCTTTACGCCGTCAGCTCAACACACTGCTTGCTCGGCGTGTACGGGTTTGCGCGAGGGCCGTACGCACCTGAATTATCTGCGCCATGAGATGGACCTGTGCATGAACGCCGATCCGTGGAAGGCAGGAATTGCCACTCGAACGGTGGAACAAGATCGACGAAGCGATACGGTACCTTGTTATACCGCGTACGACCACCGGGACTATCAGACGCTTATGGAAGGAATATGAGCAACGGGTGTAAGGCCGAATGAGCTGAAACGGGCTAACCTAATAGATCTTGGGCATACCACGCATGATCTTCNAACCGCAANCGG] consensusID : consensus_9296#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 563 fasta sequence [TGGGCTAGTAGCTAGCAAAGGCAGATAAGCTGTTGGAACGCTTGGTTAATCGATATCGACAGAATAGGAACCGAACGAGACTGAACCCCGGTACTAGTGCTTGTTAATAGAAGAAACATAAGCGATGAGTTCAGCACGGCAGGTGCATGACTCTTATGCATCGGAGGATTTCATACCTTTTGAACGACGACAACAGTCCCATTCGTCGCCGGATTTCATACCACTCCAGCCAGAACAGCAACCTCATTCATCGCAGAACATCGAACCATTACAACGACCGAAGCAACATCAGTCCCACGGCTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACAAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGACAGCGGCAGCCCCAATCATCACGCCACCTACCTACCAGCCAAACGACAGCAGCAGCCCCAATCATCACGCCACCTACCTCCAGTGGATGATCCTGGCAACGAGAAATACTACAGNATAACCGGGCCCCCGCTTTTCCAACCGAAT] [+] EMBL CNS08Z24 [TGGGCTAGTAGCTAGCAAAGGCAGATAAGCTGTTGGAACGCTTGGTTAATCGATATCGACAGAATAGGAACCGAACGAGACTGAACCCCGGTACTAGTGCTTGTTAATAGAAGAAACATAAGCGATGAGTTCAGCACGGCAGGTGCATGACTCTTATGCATCGGAGGATTTCATACCTTTTGAACGACGACAACAGTCCCATTCGTCGCCGGATTTCATACCACTCCAGCCAGAACAGCAACCTCATTCATCGCAGAACATCGAACCATTACAACGACCGAAGCAACATCAGTCCCACGGCTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACAAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGACAGCGGCAGCCCCAATCATCACGCCACCTACCT ] [+] EMBL BX626464 [ CTAGCAAAGGCAGAGAAGCTGTTGGAACGCTTGGTTAATCGATATCGACAGAATAGGAACCGAAAGAGCCTAAA CCGGTACTAGTGCTTGTTAATAGAAGAAACATAAACGATGAGTTCAGCACGGCAGGTGTATGACTCTTATGCATCGGAGGATTTCATACCTTTTGAACGACGACAACAGTCCCATTCGTCGCCGGA TTCATACCACTCCAACAAGAACAGCAGCCCCATTCATCACGGGTCTGCAAACCATTACAACGACCGAAGCAACATCAGTCCCACGGCTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACCAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGGCAGCAGCAGCCCCAAACATCACAGGACCT CGTACCAGCCAAACGACAGCAGCAGCCCCAATCATCACGCCACCTACCTCCAGTGGATGATCCTGGCAACGAGAAATACTACAGNATAACCGGGCCCCCGCTTTTCCAACCGAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 CGAGGCCANGAATCCGCACGAGTGTACGCAAGTACATATCCAAGCACGGCAAAAGATCAT 60 consensus_9296#1 ------------------------------------------------------------ consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 ATTATTAATCACATTAAATCATATTCAAAAGCTACAGCTTTGGAAGGTCTAAAGCTCCGG 120 consensus_9296#1 ------------------------------------------------------------ consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 TCCGTGGGCTAGTAGGCTANGGCAAGAGGCCGAGAAGGCTGTTGGAACGGCTTGGGGTTA 180 consensus_9296#1 ------------------------------------------------------------ consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 AATCGAGTACTCGAGCAGNAAGTAGGGAAACCGGAAAAGAGGCCTAANAGCCCGGGTACT 240 consensus_9296#1 ------------------------------------------------------------ consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 AAGCTCGCCGTTTGGTGNAGCGTACGAGAGGAAGAGCAGTAGATGNCGAATGCAGGGTTC 300 consensus_9296#1 ------------------------------------------------------TTTTTT 6 consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 ACGCGAACGGGGCNNAGGGNTGCACATGCACCTCTTANTGCAGTCGCGACNGCGAATTGC 360 consensus_9296#1 GTTTTTTTCAGTTATGCGGTTATACTTAACTTTATAGTTAGGAGCACTGTTACGATTATC 66 consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 ACTTANCGCCN---CTCTGTGGACACCTGNCAACGGGATCACAGAACACAAAG-GGNGTT 416 consensus_9296#1 ACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTTGCGACCCTTTCGCCGGCGCT 126 consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 GCCCACCAAAAGTTTTCGGGGGGTACGTGGCNNCCCGAGGAAAAGNGATCTGCCACAG-T 475 consensus_9296#1 CCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCT 186 consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 AAAGCNCCCAACGNGTTGGGNGNCGGGNCNCGCGAGGAAGGGGTAAANAGCCCAAGGGCA 535 consensus_9296#1 TTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCA--GATC 244 consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 AAGGTGAGGCACACGAGAACGTGTNGAAGTTACAGANCCGGGGGGGTANATACACATGTG 595 consensus_9296#1 GTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAG 304 consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 CGANNAANGNNCNGCCATAGGGTATNTTACGCNAAAGNGCCACAATGCNCCTGNNANGAA 655 consensus_9296#1 CGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTT 364 consensus_9296#2 ------------------------------------------------------------ consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 GGGGGGCCNAACGGGATANGACNGGGAGGGGNTTGGACGCNGAGNCNTGGGGGAGGTGCG 715 consensus_9296#1 GTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCAT 424 consensus_9296#2 -----------------------------CCCAGGCATNGANTCGCCGGATTTCATACC- 30 consensus_9296#3 ----------------------------------------------------------T- 1 consensus_9296#0 CGAGACNCACGGGTANTNGTAGCGTGAGCGACTNGTATAGGCCCACGAGGTGAGGAGCCC 775 consensus_9296#1 CTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAG 484 consensus_9296#2 ATTCCATCAAGAACAGCAGCCCCATTCATCGCGGG-AATGCAAACCAAACCA--A---CG 84 consensus_9296#3 GGGCTAGTAGCTAGCAAAGGCAGATAAGCTGTTGG-AACGCTTGGTTAATCG--ATATCG 58 consensus_9296#0 AAGGCAGCNGACCGGCNAGGCGANAACAGGGCGGGCGAGGGACGCNCGGCAG--GANTAN 833 consensus_9296#1 CAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGT 544 * * * consensus_9296#2 GCAGCAGCAGCCCCAAACATCACAGGACCTCG-TACCA--GCCAAACGACAGCAGCAGCC 141 consensus_9296#3 ACAGAATAGGAACCGAACGAGACTGAACCCCGGTACTAGTGCTTGTTAATAGAAGAAACA 118 consensus_9296#0 ACCAGAATGCNANGGAAAGGTGCNGGGGCNAGACATANNGGACGAGCATGAAGCGNGCCN 893 consensus_9296#1 CTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTC-CCCTACCAGACCGCGCAGAT 603 * * * * * * consensus_9296#2 CCAATCATCACGCCACCTACCTCCAGTGGATG-ATCCTG--GCAACGAGAA-ATACTACA 197 consensus_9296#3 TAAGCGATGAGTTCAGC-ACGGCAGGTGCATG-ACTCTTATGCATCGGAGG-ATTTCATA 175 consensus_9296#0 GAGCGGANGNGCCNGNCAAGCACNGGNNGCGGCAAANNNGCCNCTCGACGG-AGNNNACA 952 consensus_9296#1 ATTTGGCCATGTACAGCACCATTCGGTTGGAAAAGCGGGGTCCGGTTATGCTGTAGTATT 663 * * * * consensus_9296#2 GCATA-ACCGGACCCCGCTTTTCCAACC-GAATGGTGCTGTA-CATGGCCAA--ATATCT 252 consensus_9296#3 CCTT---TTGAACGACGAC-----------AACAGTCCCATT-CGTCGCCGG--ATTTCA 218 consensus_9296#0 CCACGCGGNNCNGGGNGANGAGTGGGGG-GAACGGCGNGANAGCNACAGCAG--GNCGNG 1009 consensus_9296#1 TCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTC 723 * * * consensus_9296#2 GCGCGG----TCTGGTAGG---GGAAAAGAAGAGCATCCGCTGTGTGCTGGCCGAAT--- 302 consensus_9296#3 TACCAC----TCCAGCCAG---A-ACAGCAACCTCATTCATCGCAGAACATCGAACC--- 267 consensus_9296#0 GGGTAGCGGGTGCGNNGAGTGCACACAACAGAGNNGTGTGGCTCACGGAGATCGANG--- 1066 consensus_9296#1 GTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGC 783 * * consensus_9296#2 ATGA-GAC---GACCGA--CAGCA--GTCAGCGCAAGGCGCGGGAAGCTTTACG--CCGT 352 consensus_9296#3 ATTACAAC---GACCGAAGCAACA--TCAGTCCCACGGCTCGCCGGATTTCATA--CCAT 320 consensus_9296#0 GNNGCNGNCGGGGACGGGGCNNCGACNCAGGGGGNAAGTGCGCNNAGCACGGNG--CNNC 1124 consensus_9296#1 ATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGT 843 * * * * * consensus_9296#2 -CAGCTCAACACAC--TGCTTGCTCGGCGTGTACGGGTTTGCGCGAGGGCCGTACGCACC 409 consensus_9296#3 -TCCATCAAGA-AC--AGCAGCCCCATTCATCGCGGGAATGCAAACCAAACAAACG-GCA 375 consensus_9296#0 GNCGGNGAANAGGCGGAGCGAGCNNGNGNGGCGTGAGGTACNGAGAGANNNGCATGNGGA 1184 consensus_9296#1 GGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATG---GGGCT 900 * * * * * consensus_9296#2 TGAATTATCTGCGCCATGAG-----------ATGGACCTGTGCATGAAC--GCCGATCCG 456 consensus_9296#3 GCAGCAGCCCCAAACATCAC-----------AGGACCTCGTACCAGCCA--AACGA-CAG 421 consensus_9296#0 ANAGCANCGGNGCGCACGACCGATAGAGAGCAGNCNNCNGAGCAAGNCACTGCCGA-CNA 1243 consensus_9296#1 GCTGTTCTTGTTGCAATGGTA---TGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTT 957 * ** consensus_9296#2 TGGAAGGCAGGAATTGC-----CACTCGAACGGTGGAA-CAAGATCGACGA-AGCGATA- 508 consensus_9296#3 CGGCAGCCCC-AATCAT-----CACGCCACCTACCTAC-CA-GCCAAACGACAGCAGCA- 472 consensus_9296#0 CGACCGGCGCGAGNCAGA--GGCACANGANAGAGGGNNANNCGCCAGANGAANGGAANNA 1301 consensus_9296#1 CAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCG 1017 * * * * * consensus_9296#2 ----CGGTACCTTGTTATAC---CGCGTACGACCACCGG-GACTATCAGACGCTTATGGA 560 consensus_9296#3 ----GCCCCAATCATCACGC---CACCTACCTCCAGTGG-ATGATCCTGGCAACGAGAAA 524 consensus_9296#0 TGGGCGCNACGCCNCGNNAC---CGCGAACACCNGNCNGCNNCCACNCNGANAGCANNNA 1358 consensus_9296#1 CTTATGTTTCTTCTATTAACAAGCACTAGTACCGGTTTAGGCTCTTTCGGTTCCTATTCT 1077 * * * * * consensus_9296#2 AGGAATATGAGCAACGGGT---GTAAGGCCGAATGAGCTG-AAACGGGCTAACCTAATAG 616 consensus_9296#3 TACTACA-GNATAACCGGG---CCCCCGCTTTTCCAACCG-AAT---------------- 563 consensus_9296#0 CGGNACANAGNCNNCNCGNAAGNCAGCGCGAGGNGGGNGNCGNTCGAGCGAAGCTANGAG 1418 consensus_9296#1 GTCGATATCGATTAACCAA---GCGTTCCAACAGCTTCTCTGCCTTTGCTA-GCTACTAG 1133 * * * consensus_9296#2 ATCTTGGGCATACCACGCATGATCTTCNAACCGCAANCGG-------------------- 656 consensus_9296#3 ------------------------------------------------------------ consensus_9296#0 ACAGAGNGAGCANCGAGNCCNAACGCCGNGGACCGGGCGGCNAAACAGCAGNCNGTAGCC 1478 consensus_9296#1 CCCACGGACGGAGCTTTAGACCTTCCCAAAGCTGTAGCTTTTGAATATGATTTAA----- 1188 consensus_9296#2 --- consensus_9296#3 --- consensus_9296#0 GGC 1481 consensus_9296#1 --- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||