These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9299#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2420 fasta sequence [CCGCCACTGGTGGTGGATGTTTCTCGTTCAGCTAGCTCGCTAGTTATTACTCACACGTTTTATGAGTCGTTAGTGCGTTTTTTTGTTTCTTAATGTTATCAAACAATACCAAACCTGTGACGACCGTATCTTCATCAGTATCGTTAAACAGCAACAGCATCCGATGGCGACTTGTGGATCGATTGCGCGCCAATCTGTTGGCCCTTCTTAGAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCATCGCAAGGTATCCGGGAGAAGTGGTACACGGACGATCTGGCCCGGTTCCGCAAGACGATCCAGATGCCCGTGCCGAGCAGTTACAACGACGTCACGGAGGATGCGGGCCTGCGCGATCACGTCGGCACGGTGTGGTACGATCGCAAGTTTTTCGTCCCGCGGGCATGGTCCAAGGGTGATGATCGCGTTTTCCTGCGGTTCGGTTCTGTGCACTACTCTACAATTGTGTGGATCAATGGAGTTCAGGTGATGACCCACGAGTTTGGACATCTTCCGTTTGAGGCCGACGTGACGAACGCGCTTAAATACGGCGCCGAGAACCGCATTACCGTGCTGTGTGACAATGTGCTGCTTCAGGTGACGGTTCCACAGGGCAAGGTCGACAATCAGGCGATTGACAACGGTGTGGAATTGGTCCAGTCGTACACGTTCGACTTCTTCAACTACGCAGGTATCCATCGGTCGGTTGTGCTGTACACGGTGCCGCGGGTCTACATCCGCGATGTAGTCATCCACACCAGCTACGAAGGAGATGAAGGCCGGGTGGACTACCAGGTCACGACCAGTACGAACGAAACCGACCATCTGCTGCTGAAGGTGAAGCTGTACGATCGCAACGGCACGCTCGTCAGCAAGGACGAATCGGAGGCGAAACTGCAGGGCACGGTAGTTGTGCCGCAGGTGCAGCTCTGGTGGCCATATCTGATGCATCCCGAGCCGGGCTATCTCTACACGATGGAGATCACTCTCGGGAAAGCACAATCAAACGATGCGCCTACCGATGAGAAGGAAGAGGATACGGTGCTGGATGTGTACCGGTTCAAGGTTGGCATCCGTACGCTCGAGTGGAACAACAGTTCGTTCCTAATCAACGGGAAGCCTATTTACTTCAGGGGATTTGGACGCCACGAAGATTCGGATATACGTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCGGTGCCAACGCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCGACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATC-GAGCAGCTTATCCATCGGGACC-GTAACCAT-CCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAG-TACACGAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTATGCCAACTCCGGG-AAGCTCAACATG-ATCACCAA-CCGTGTCATCGAAGAGG-CGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTATGGTGCCGATACGCAGGAAGGA-CTTCATACGCTTCCTGCCTACATCT-GGTCCGAGGACTA-CC-AGACGCGTGTCTT-CAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG-TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAGAGTCACCTGCCGGACGATCTGTTCCTGTACACGGCCCCCGAGAACAGCCAGCTATCACATGAGAAGACGGAACTGTAGAGAAAGAGAGAATGAGTGAGCGAGTGAGTGAGTGTGTAGCTGCCATTAACGCCAAACAACCCACTTACAATTGGTTTAGAGTTATGCACGAAACCCTGAAGTATTGGACAATCGTTTTGCGTTGTTCCGCTATTATTTCTCTAGCATCTAGCTGTTAAGTGTTACTACGGAACTATTTCTGGACTGATAATGCAA] [+] EMBL BM596081 [CCGCCACTGGTGGTGGATGTTTCTCGTTCAGCTAGCTCGCTAGTTATTACTCACACGTTTTATGAGTCGTTAGTGCGTTTTTTTGTTTCTTAATGTTATCAAACAATACCAAACCTGTGACGACCGTATCTTCATCAGTATCGTTAAACAGCAACAGCATCCGATGGCGACTTGTGGATCGATTGCGCGCCAATCTGTTGGCCCTTCTTAGAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCATCGCAAGGTATCCGGGAGAAGTGGTACACGGACGATCTGGCCCGGTTCCGCAAGACGATCCAGATGCCCGTGCCGAGCAGTTACAACGACGTCACGGAGGATGCGGGCCTGCGCGATCACGTCGGCACGGTGTGGTACGATCGCAAGTTTTTCGTCCCGCGGGCATGGTCCAAGGGTGATGATCGCGTTTTCCTGCGGTTCGGTTCTGTGCACTACTCTACAATTGTGTGGATCAATGGAGTTCAGGTGATGACCCACGAGTTTGGACATCTTCCGTTTGAGGCCGACGTGACGAACGCGCTTAAATACG ] [+] EMBL CNS09CRC [ CGTATCTTCATCAGTATCGTTAAACAGCAACAGCATCCGATGGCGACTTGTGGATCGATTGCGCGCCAATCTGTTGGCCCTTCTTAGAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCATCGCAAGGTATCCGGGAGAAGTGGTACACGGACGATCTGGCCCGGTTTCGCAAAACGATCCAGATGCCCGTGCCGAGCAGTTACAACGACGTCACGGAGGATGCGGGCCTGCGCGATCACGTCGGCACGGTGTGGTACGATCGCAAGTTCTTCGTCCCGAGGGCATGGTCCAAGGGTGATGATCGCGTTTTCCTGCGGTTCGGTTCTGTGCACTACTCTACAATTGTGTGGATCAATGGAGTTCAGGTGATGACCCACGAGTTTGGACATCTTCCGTTTGAGGCCGACGTGACGAA GCGCTTAAATACGGCGCCGAGAACCGCATTACCGTGCTGTGTGACAATGTGCTGCTTCAGGTGA ] [+] EMBL BX621253 [ TTCCGTTTGAGGCCGACGTGACGAAGGCGCTTAAATACGGCGCCGAGAACCGCATTACCGTGCTGTGTGACAATGTGCTGCTTCAGGTGACGGTTCCACAGGGCAAGGTCGACAATCAGGCGATTGACAACGGTGTGGAATTGGTCCAGTCGTACACGTTCGACTTCTTCAACTACGCAGGTATCCATCGGTCGGTTGTGCTGTACACGGTGCCGCGGGTCTACATCCGCGATGTAGTCATCCACACCAGCTACGAAGGAGATGAAGGCCGGGTGGACTACCAGGTCACGACCAGTACGAACGAAACCGACCATCTGCTGCTGAAGGTGAAGCTGTACGATCGCAACGGCACGCTCGTCAGCAAGGACGAATCGGAGGCGAAACTGCAGGGCACGGTAGTTGTGCCGCAGGTGCAGCTCTGGTGGCCATATCTGATGCATCCCGAGCCGGGCTATCTCTACACGATGGAGATCACTCTCGGGAAAGCACAATCAAACGATGCGCCTACCGATGAGAAGGAAGAGGATACGGTGCTGGATGTGTACCGGTTCAAGGTTGGCATCCGTACGCTCGAGTGGAACAACAGTTCGTTCCTAATCAACGGGAAGCCTATTTACTTCAGGGGATTTGGACGCCACGAAGATTCGGATATACGTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCGGTGCCAACGCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCGACGAGCACNGTATCATGATCATCGACGAGTGTCCTAGCGTANACACGGAGAATT ] [+] EMBL BX617407 [ ACAATCAAACGATGCGCCTACCGATGAGAAGGAAGAGGATACGGTGCTGGATGTGTACCGGTTCAAGGTTGGCATCCGTACGCTCGAGTGGAACAACAGTTCGTTCCTAATCAACGGGAAGCCTATTTACTTCAGGGGATTTGGACGCCACGAAGATTCGGATATACGTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCGGTGCCAACCCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCGACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATC GAGCAGCTTATCCATCGGGACC GTAACCAT CCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTC ] [+] EMBL BX611242 [ TTCGGATATACGTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCGGTGCCAACGCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCGACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATC GAGCAGCTTATCCATCGGGACC GTAACCAT CCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAG TACACGAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTATGCCAACTCCGGG AAGCTCAACATG ATCACCAA CCGTGTCATCGAAGAGG CGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTATGGTGCCGATACGCAGGAAGGA CTTCATACGCTTCCTGCCTACATCT GGTCCGAGGACTA CC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGATGCGCTTCGCAAGCAGAACTTCTTCATC ] [+] EMBL BX618136 [ GAACGTCCCACTATCCCTACTCGTAGGAAAGCATGCAGTTTGCCGACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATC GAGCAGCTTATCCATCGGGACC GTAACCAT CCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAG TACACGAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTATGCCAACTCCGGG AAGCTCAACATG ATCACCAA CCGTGTCATCGAAGAGG CGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTATGGTGCCGATACGCAGGAAGGA CTTCATACGCTTCCTGCCTACATCT GGTCCGAGGACTA CC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCC ] [+] EMBL AL932189 [ aACCCGGAGA TTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATCAGAGCAGCTTATCCATCGGGACCAGTAACCATACCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGATACACCAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTANATGATGATGTTGCGGGACAATACCTGGACATTGTCAGGTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGTAAGCTCAACATGTATTACCAAGCCGTGTCATCGAAGAGGACGGAAGCATGGAACAATAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGA CTTCATACGCTTCCTG CTACATCTGGGTCCGANGACTA CCNAGACGCGTGTCTTACAGGCAGCACTTCAAGGCG TCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAGATTTGTGTGGAACTTTGCTGACTTCA ] [+] EMBL AGA285937 [ AAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAG TACACGAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGG ] [-] EMBL AGA284578 [ tcCGGAGTATGGTGCCGATACGCAGGAAGGACCTTCATACGCTTCCTGCCTACATCT GGTCCGAGGACTACCC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAA ] [+] EMBL BX618501 [ ATCT GGTCCGAGGACTA CC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAGAGTC ] [-] EMBL CNS09CRD [ CCGAGGACTA CC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGA ATGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGT GAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTC GGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTG TGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAGAGTCACCTGCCGGACGATCTGTTCCTGTACACGGCCCCCGAGAACAGCCAGCTATCACATGAGAAGACGGAACTGTAGAGAAAGAGAGAATGAGTGAGCGAGTGAGTGAGTGTGTAGCTGCCATTAACGCCAAACAACCCACTTACAATTGGTTTAGAGTTATGCACGAAACCCTGAAGTATTGGACAATCGTTTTGCGTTGTTCCGCTATTATTTCTCTAGCATCTAGCTGTTAAGTGTTACTACGGAACTATTTCTGGACTGATAATGCAA] [+] EMBL BX618864 [ CTTCAAGGCGTTCGAAGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAGAGTCACCTGCCGGACGAACTGTTCCTGGACACGGCCCCCGAGAACAGCCAGCTATCACATGAGAAGACGGAACTGTAGAGAAAGAGAGAATGAGTGAGCGAGTGAGTGAGTGGGGAGCTGCCATTAACGCCAAACAACCCACTTACA ] consensusID : consensus_9299#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 799 fasta sequence [CAGATCCGCACGANGGACATCGAGCAGCTTATCCATCGCGGACGTAACCATCCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGACGCGCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTACCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCTGGTCCGAGGACTACCAGACGCGTGTCTTCAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAGTTTGTGTGGAACTTTGCTGACTTCAAGACGGCCCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTCACCCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAAGAGTCACCTGCCGGGACGATCTGTTCCTGTACACGGACCCCCGAGAAACAGCCAGTATCCACAGGAGAAGAACGGGAACTGTAGAGAAAGAGAAATTAGCGAATTGAGTNAATTAAGTGTGTAGTGCCATTTACGGCAAAAACCCAGTTTANCAATTGGTTAAG] [+] EMBL BX468268 [CAGATCCGCACGANGGACATCGAGCAGCTTATCCATCGCGGACGTAACCATCCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGACGCGCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTACCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCTGGTCCGAGGACTACCAGACGCGTGTCTTCAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAGTTTGTGTGGAACTTTGCTGACTTCAAGACGGCCCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTCACCCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAAGAGTCACCTGCCGGGACGATCTGTTCCTGTACACGGACCCCCGAGAAACAGCCAGTATCCACAGGAGAAGAACGGGAACTGTAGAGAAAGAGAAATTAGCGAATTGAGTNAATTAAGTGTGTAGTGCCATTTACGGCAAAAACCCAGTTTANCAATTGGTTAAG] consensusID : consensus_9299#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 675 fasta sequence [CCGCGCGGGTTCGCGGGTCGGGTTTGGTTGGATGAGATGTCCACAGCGCCTTAATTTGATTGTCGTAATCGGAAGTGTTGGAACGTGTGTGGTGTAGGGTGTACTAGTTCAGGAGCAGCTACAGCATTGGAAAGCACGTGATTCAAAGTACACAGCAGCAAGTCAGTGCTCGGAGTGCATCGGATTGAACCACGCAACAGGTTTGACGAAGAGGGTACGAAAGCATGCGAAGACCTATGTTTACCGACCGCCAATGTCGGTAACTTTTGCTGGCCAAGCGAACCCAACTGTGATTGAAGAGTGTTTGTGTTCCGGTCTACCATTGGCTGTGGCGGTTAGAAGCACCAGCACGCAATAATGGTGGCGCCATCTAGTGATGGGTCCCGCAAGCTACTGCTGCTCAGGGATGCAGACCGACGCAAGCGGCGGATAGAGAAGTTGCGCCGCATCCAGCACGATCATTGCATGCGACTGATTGTGATAGCGTTAATAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCA] [+] EMBL BM656726 [CCGCGCGGGTTCGCGGGTCGGGTTTGGTTGGATGAGATGTCCACAGCGCCTTAATTTGATTGTCGTAATCGGAAGTGTTGGAACGTGTGTGGTGTAGGGTGTACTAGTTCAGGAGCAGCTACAGCATTGGAAAGCACGTGATTCAAAGTACACAGCAGCAAGTCAGTGCTCGGAGTGCATCGGATTGAACCACGCAACAGGTTTGACGAAGAGGGTACGAAAGCATGCGAAGACCTATGTTTACCGACCGCCAATGTCGGTAACTTTTGCTGGCCAAGCGAACCCAACTGTGATTGAAGAGTGTTTGTGTTCCGGTCTACCATTGGCTGTGGCGGTTAGAAGCACCAGCACGCAATAATGGTGGCGCCATCTAGTGATGGGTCCCGCAAGCTACTGCTGCTCAGGGATGCAGACCGACGCAAGCGGCGGATAGAGAAGTTGCGCCGCATCCAGCACGATCATTGCATGCGACTGATTGTGATAGCGTTAATAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCA] consensusID : consensus_9299#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 469 fasta sequence [CCCCGAGGTTTAAATCAGCATCGAGCAGCTTATCATCGGGACGTNACATCCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTACCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCTGGTCCGAGGACTACCAGACGCGTGTCTTCAGCCAGCACTTCAAGGGCGTTCGATGCGCTGCGCAAGCAGAA] [+] EMBL AL930893 [CCCCGAGGTTTAAATCAGCATCGAGCAGCTTATCATCGGGACGTNACATCCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTACCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCTGGTCCGAGGACTACCAGACGCGTGTCTTCAGCCAGCACTTCAAGGGCGTTCGATGCGCTGCGCAAGCAGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 CCGCCACTGGTGGTGGATGTTTCTCGTTCAGCTAGCTCGCTAGTTATTACTCACACGTTT 60 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 TATGAGTCGTTAGTGCGTTTTTTTGTTTCTTAATGTTATCAAACAATACCAAACCTGTGA 120 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 CGACCGTATCTTCATCAGTATCGTTAAACAGCAACAGCATCCGATGGCGACTTGTGGATC 180 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 GATTGCGCGCCAATCTGTTGGCCCTTCTTAGAGTGGTGACGTTTGCGGTAATGGGCATGA 240 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 TCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCA 300 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 CCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTA 360 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 TGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCATCGCAAGGTATCCGGGAGAAGTGGT 420 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 ACACGGACGATCTGGCCCGGTTCCGCAAGACGATCCAGATGCCCGTGCCGAGCAGTTACA 480 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 ACGACGTCACGGAGGATGCGGGCCTGCGCGATCACGTCGGCACGGTGTGGTACGATCGCA 540 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 AGTTTTTCGTCCCGCGGGCATGGTCCAAGGGTGATGATCGCGTTTTCCTGCGGTTCGGTT 600 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 CTGTGCACTACTCTACAATTGTGTGGATCAATGGAGTTCAGGTGATGACCCACGAGTTTG 660 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 GACATCTTCCGTTTGAGGCCGACGTGACGAACGCGCTTAAATACGGCGCCGAGAACCGCA 720 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 TTACCGTGCTGTGTGACAATGTGCTGCTTCAGGTGACGGTTCCACAGGGCAAGGTCGACA 780 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 ATCAGGCGATTGACAACGGTGTGGAATTGGTCCAGTCGTACACGTTCGACTTCTTCAACT 840 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 ACGCAGGTATCCATCGGTCGGTTGTGCTGTACACGGTGCCGCGGGTCTACATCCGCGATG 900 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 TAGTCATCCACACCAGCTACGAAGGAGATGAAGGCCGGGTGGACTACCAGGTCACGACCA 960 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 GTACGAACGAAACCGACCATCTGCTGCTGAAGGTGAAGCTGTACGATCGCAACGGCACGC 1020 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 TCGTCAGCAAGGACGAATCGGAGGCGAAACTGCAGGGCACGGTAGTTGTGCCGCAGGTGC 1080 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 AGCTCTGGTGGCCATATCTGATGCATCCCGAGCCGGGCTATCTCTACACGATGGAGATCA 1140 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 CTCTCGGGAAAGCACAATCAAACGATGCGCCTACCGATGAGAAGGAAGAGGATACGGTGC 1200 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 TGGATGTGTACCGGTTCAAGGTTGGCATCCGTACGCTCGAGTGGAACAACAGTTCGTTCC 1260 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 TAATCAACGGGAAGCCTATTTACTTCAGGGGATTTGGACGCCACGAAGATTCGGATATAC 1320 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 GTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCG 1380 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 GTGCCAACGCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCG 1440 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 ACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCAC 1500 consensus_9299#2 ------------------------------------------CCGCGCGGGTTCGCGGGT 18 consensus_9299#1 -----------CAGATCCGCACGANGGACATCGAGCAGCTTATCCATCGCGGACGTAACC 49 consensus_9299#3 ---------CCCCGAGGTTTA-AATCAGCATCGAGCAGCTTATC-ATCG-GGACGTNAC- 47 consensus_9299#0 AGATCCTGCTGGAAAAGCACAAATCCAGCATCGAGCAGCTTATCCATCGGGACCGTAACC 1560 consensus_9299#2 CGGGTTTGGTTGGATGAGATGTCCACAGCGCCT--TAATTTGATTGTCGTAATCGGAAGT 76 * * * ** *** ** * consensus_9299#1 ATCCGAGCGTG-GTGATGT--GGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCG 106 consensus_9299#3 ATCCGAGCGTG-GTGATGT--GGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCG 104 consensus_9299#0 ATCCGAGCGTG-GTGATGT--GGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTCG 1617 consensus_9299#2 GTTGGAACGTGTGTGGTGTAGGGTGTACTAGTTCAGGAGCAGCTACAGCATTGGAAAGCA 136 * ** **** *** *** *** * * * * ** * * * consensus_9299#1 CGAG-TCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGA--CGCG-C 162 consensus_9299#3 CGAG-TCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGA--CGCGTC 161 consensus_9299#0 CGAG-TCCTTACTTCGAGGCCGTGGCGCAGTACACGAAAAAGCTGGACCCGA--CGCGTC 1674 consensus_9299#2 CGTGATTCAAAGTACACAGCAGCAAGTCAGTGCTCGGAGTGCATCGGATTGAACCACGCA 196 ** * * * * * * ** * **** * * * * * ** * ** consensus_9299#1 CCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACA 222 consensus_9299#3 CCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACA 221 consensus_9299#0 CCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACA 1734 consensus_9299#2 ACAGGTTTGACGAAGAGGGTACGAAAGCATGCGAAGACCTATGTTTACCGACCGCCAATG 256 ** * ** * *** * * ** ** * ** * * consensus_9299#1 TTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTA 282 consensus_9299#3 TTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTA 281 consensus_9299#0 TTGTCAGCTTCAACCGGTACAACGCGTGGTATGCCAACTCCGGGAAGCTCAACATGATCA 1794 consensus_9299#2 TCGGTAACTTTTGCTGGCCAAGCGAACCCAACTGTGATTGAAGAGTGTTTG-TGTTCCGG 315 * * * *** * ** * ** * * * * * * * consensus_9299#1 CCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGA 342 consensus_9299#3 CCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGA 341 consensus_9299#0 CCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGA 1854 consensus_9299#2 TCTACCATTGGCTGTGGCGGTTAGAAGCACCAGCACGCAATAATGGTGGCGCCATCTAGT 375 * *** * * * ****** ** * * * *** * consensus_9299#1 TGTCGGA---GTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCT 399 consensus_9299#3 TGTCGGA---GTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCT 398 consensus_9299#0 TGTCGGA---GTATGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCT 1911 consensus_9299#2 GATGGGTCCCGCAAGCTACTGCTGCTCAGGGATGCAGACCGACGCAAGCGGCGGATAGAG 435 * ** * * * * * * * * **** * * * **** * ** * * consensus_9299#1 GGTCCGAGGACTACCAGACGCGTGTCTT-CAGCCAGC--ACTTCAAGG-CGTTCGATGCG 455 consensus_9299#3 GGTCCGAGGACTACCAGACGCGTGTCTT-CAGCCAGC--ACTTCAAGGGCGTTCGATGCG 455 consensus_9299#0 GGTCCGAGGACTACCAGACGCGTGTCTT-CAGCCAGC--ACTTCAAGG-CGTTCGATGCG 1967 consensus_9299#2 AAGTTGCGCCGCATCCAGCACGATCATTGCATGCGACTGATTGTGATAGCGTTAATAGTG 495 * * * * * ** ** ** * * * * * **** * * consensus_9299#1 CTG-CGCAAGCAGAACTTCTTCATCGGCGAGTTTGTGTGGAACTTTGCTGACTTCAAGAC 514 consensus_9299#3 CTG-CGCAAGCAGAA--------------------------------------------- 469 consensus_9299#0 CTG-CGCAAGCAGAACTTCTTCATCGGCGAGTTTGTGTGGAACTTTGCCGACTTCAAAAC 2026 consensus_9299#2 GTGACGTTTGCGGTAATGGG-CATGATCGGTTGCATGGTGAAC---GTCGTGTTTGGAGC 551 ** ** ** * * consensus_9299#1 GGCCCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTCACCCGCAACCGGCA 574 consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 GGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCA 2086 consensus_9299#2 AATGTACACCT---CAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATC 608 consensus_9299#1 ACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAA 634 consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 ACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAA 2146 consensus_9299#2 GGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAA 668 consensus_9299#1 AGAGTCACCTGCCGGGACGATCTGTTCCTGTACACGGACCCCCGAGAAACAGCCAGTATC 694 consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 -GAGTCACCTGCCGG-ACGATCTGTTCCTGTACACGG--CCCCCGAGAACAGCCAGCTAT 2202 consensus_9299#2 CAACCCA----------------------------------------------------- 675 consensus_9299#1 CACAGGAGAAGAACGGGAACTGTAGAGAAAGAGAAATTAGCGAATTGAGTNAATTAAGTG 754 consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 CACATGAGAAGAC--GGAACTGTAGAGAAAGAGAGAATGAGTGAGCGAGTGAGT-GAGTG 2259 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 TGTAG-TGCCATTTACGGCAAAAACCCAGTTTANCAATTGGTTAAG-------------- 799 consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 TGTAGCTGCCATTAACGCCAAACAACCCACTTACAATTGGTTTAGAGTTATGCACGAAAC 2319 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ------------------------------------------------------------ consensus_9299#3 ------------------------------------------------------------ consensus_9299#0 CCTGAAGTATTGGACAATCGTTTTGCGTTGTTCCGCTATTATTTCTCTAGCATCTAGCTG 2379 consensus_9299#2 ------------------------------------------------------------ consensus_9299#1 ----------------------------------------- consensus_9299#3 ----------------------------------------- consensus_9299#0 TTAAGTGTTACTACGGAACTATTTCTGGACTGATAATGCAA 2420 consensus_9299#2 ----------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||