These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9307#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1911 fasta sequence [ACTACGTGAAAAAACCAAAACATTCGGCGGCTCTGGGTGTTATTGCAATAGTTAACTAAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATG-ATCTGTTTCGTAAGCTTTCGTGTGGTGCCAAATTTTCCAACAAAAACAGGCTGCCAGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACG-GACACCGGCCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAAAAAGCGAAGATTCTTCGAGTGACGATTCGGGAAGCGAACAGGAGAACCGGGAGCAGGAAAAATCAGTGCAACAAAAAAAGATTGTACCTCCGGAGAAGGTCGAGCTGATCAATCAGCTTCGCTTGAATCGGCTGCGAAACCAGCTCAAAATCCATGTGAAGAAAAGTCGACACAGTCCCGAAGTGCCCAACATCATCGAATCGTTCGATCAGCTCAGCACTGACTATGGTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACC-GGTGCAAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCGGGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGAAGTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAG-ACGCAGCGGGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGACGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTTCCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG-AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGG-TGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAGTGCGGCACCATTATTA] [+] EMBL CNS08L5I [ACTACGTGAAAAAACCAAAACATTCGGCGGCTCTGGGTGTTATTGCAATAGTTAACTAAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATG ATCTGTTTCGTAAGCTTTCGTGTGGTGCCAAATTTTCCAACAAAAACAGGCTGCCAGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGAGACACCGGCCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAAAAAGCGAAGATTCTTCGAGTGACGA ] [+] EMBL CNS08MC1 [ ACGTGAACAAACCAAAACATTCGGCGGCTCTGGGTGTTATTGCAATAGTTAACTAAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGCATCTGTTTCGTAAGCTTTCGTGTGGTGCCAAATTTTCCAACAAAAACAGGCTGCCAGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACG GACACCGGCCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAAAAAGCGAAGATTCTTCGAGTGACGATTCGGGAAGCGAACAGGAGAACCGGGAGCAGGAAAAATCAGTGCAACAAAAAAAGATTGTACCTCCGGAGAAGGTCGAGCTGATCAATCAGCTTCGCTTGAATCGGCTGCGAAACCAGCTCAAAATCCATGTGAAGAAAAGTCGACACAGTCCCGAAGTGCCCAACATCATCGAATCGTTCGATCAGCTCAGCACTGACTATGGTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACC GGTGCAAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCGGGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGAATTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAGAACGCAGCGGGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGACGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGA ] [+] EMBL CNS08NC7 [ GACACAGTCCCGAAGTGCCCAACATCATCGAATCGTTCGATCAGCTCAGCACTGACTATGGTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACCGGGTGCAAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCGGGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGAAGTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAG ACGCAGCGGGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGACGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTTCCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGC ] [+] EMBL CNS08XP4 [ CAGCTCAGCACTGACTATGGTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACC GGTGCAAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCGGGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGAAGTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAG ACGCAGCGGGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGACGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTTCCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCC ] [+] EMBL AGA281605 [ GATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTTTCGCATAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAGGATTCCAAAAACTCGTTCCGCGATCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGGKTGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGG ] [+] EMBL AGA281698 [ TATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTTTCGCATAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAGGATTCCAAAAACTCGTTCCGCGATCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCGTAGCTGGTGGATCAAAAGCTGCTCTTCACCGGCCGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCG ] [+] EMBL AGA280258 [ ATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTTTCGCATAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAGGATTCCAAAAACTCGTTCCGCGATCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAAC ] [-] EMBL CNS08MC2 [ TTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTTCCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGAGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTTGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGG TGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAG GAGCAAAAAATAA ] [-] EMBL CNS08NC8 [ AGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTTGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGG TGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAGTGCGGCACCA ] [+] EMBL BX628609 [ AACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGG TGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAG ] [-] EMBL AGA281955 [ TTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTTGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGTAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAG ] [-] EMBL CNS08XP5 [ ACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAGTGCGGCACCATTATTA] consensusID : consensus_9307#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 720 fasta sequence [AGCAGAATCGCCACGAGGTATACAAACAAAACATTCGGCGTCTCTGGGGTGTTTTTTACAATAGTTCAACTGAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGATCTGTTTCGTAAGCTTTCGTGTGGTGCCCAAGTTTTCCAACAAAAACAGGCTCCCGGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGGACACCGGCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAANGAAGCGAAGGATTCTTCGAGTGACGATTCGGGAAGGCGAACAGGAGGAACCGGGAGGCAGCNAAAAAGATCAGTGCAAACAGAAGNGACAAGATTGTACCTCCGGAGAAGGTACGAGCGTGATCAATCAGNTTCGCTTGAATCGGNNTGCGAAACCAAGNTCGAGAAAGTCCATGTGAAGAAAAAAGTCGACACAGGGCCCCCGGAAAGGTGGGCGCCAAGCAATCANTCGNAAATCGGTGGGCGGAGTCCAANGGGTTCAAGGCGACANTGAACATAATCGAGGTAGTGGTNCGGAAAACCGGGGTTTGGGGTTGGGNCGAAAACANTTTCAGAAGGCTTGCNTTACNAAGGTCACACCAGGAGANNCACACAGGTGGGCACAATNGGAAAG] [+] EMBL BX469174 [AGCAGAATCGCCACGAGGTATACAAACAAAACATTCGGCGTCTCTGGGGTGTTTTTTACAATAGTTCAACTGAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGATCTGTTTCGTAAGCTTTCGTGTGGTGCCCAAGTTTTCCAACAAAAACAGGCTCCCGGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGGACACCGGCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAANGAAGCGAAGGATTCTTCGAGTGACGATTCGGGAAGGCGAACAGGAGGAACCGGGAGGCAGCNAAAAAGATCAGTGCAAACAGAAGNGACAAGATTGTACCTCCGGAGAAGGTACGAGCGTGATCAATCAGNTTCGCTTGAATCGGNNTGCGAAACCAAGNTCGAGAAAGTCCATGTGAAGAAAAAAGTCGACACAGGGCCCCCGGAAAGGTGGGCGCCAAGCAATCANTCGNAAATCGGTGGGCGGAGTCCAANGGGTTCAAGGCGACANTGAACATAATCGAGGTAGTGGTNCGGAAAACCGGGGTTTGGGGTTGGGNCGAAAACANTTTCAGAAGGCTTGCNTTACNAAGGTCACACCAGGAGANNCACACAGGTGGGCACAATNGGAAAG] consensusID : consensus_9307#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 560 fasta sequence [AATCGCCCGAGGTGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGGTGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGAGGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAAAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCACTCGTGGTTAGTAGTAACAGTAGTAACAAAAGTG] [+] EMBL AL932153 [AATCGCCCGAGGTGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGGTGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGAGGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAAAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCACTCGTGGTTAGTAGTAACAGTAGTAACAAAAGTG] consensusID : consensus_9307#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence [GACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGGTTTGGCGAAAAAATGCGACCCCATTGATACGATTGTTTGCAACGCGAATGCTCTAATCGGGGTTTTGTTTGTGTAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTTGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGT] [-] EMBL AGA283275 [GACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGGTTTGGCGAAAAAATGCGACCCCATTGATACGATTGTTTGCAACGCGAATGCTCTAATCGGGGTTTTGTTTGTGTAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTTGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 ACTACGTGAAAAAACCAAAACATTCGGCGGCTCTGGGTGTTATTGCAATAGTTAACTAAA 60 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 TTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGATCTGTTTCGTA 120 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 AGCTTTCGTGTGGTGCCAAATTTTCCAACAAAAACAGGCTGCCAGTCAAAAGAAAGCTTG 180 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 AAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGGACA 240 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 CCGGCCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGG 300 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 ATACGCGAATAAAAAGCGAAGATTCTTCGAGTGACGATTCGGGAAGCGAACAGGAGAACC 360 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 GGGAGCAGGAAAAATCAGTGCAACAAAAAAAGATTGTACCTCCGGAGAAGGTCGAGCTGA 420 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 TCAATCAGCTTCGCTTGAATCGGCTGCGAAACCAGCTCAAAATCCATGTGAAGAAAAGTC 480 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 GACACAGTCCCGAAGTGCCCAACATCATCGAATCGTTCGATCAGCTCAGCACTGACTATG 540 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 GTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACCGGTGC 600 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 AAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCG 660 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 GGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGA 720 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 AGTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAGACGCAGCG 780 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 GGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGA 840 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 CGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGAC 900 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 GACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAA 960 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 CATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTT 1020 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 CCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCT 1080 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 TTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCG 1140 consensus_9307#1 ---------------------------------------AGCAGAATCGCCACGAGGTAT 21 consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 CATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCGAGCTGGTGGATCAAAAGCTGCT 1200 consensus_9307#1 ACAAACAAAACATTCGGCGTCTCTGGGGTGTTTTTTACAATAGTTCAACTGAATTATCGG 81 consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 CTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCT 1260 consensus_9307#1 AAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGATCTGTTTCGTAAGCTTTC 141 consensus_9307#2 ---------------------AATCGCCCGAGGTGATCGAGCACAGCAGCTGTTCACCGA 39 consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 GCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGA 1320 consensus_9307#1 GTGTGGTGCCCAAGTTTTCCAACAAAAACAGGCTCCCGGTCAAAAGAAAGCTTGAAAATG 201 consensus_9307#2 GCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACG 99 consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 GCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACG 1380 consensus_9307#1 GCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGGACACCGGCG 261 consensus_9307#2 AGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCT 159 consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 AGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCT 1440 consensus_9307#1 CAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCG 321 consensus_9307#2 GATGAGCCGCGGTATCGACTTTAAGG----GTGTTAATTTGGTTGTCAATTACGACTTTC 215 consensus_9307#3 ------------------------------GACCCGGGAAAGCTGTCACCT-----TTTT 25 consensus_9307#0 GATGAGCCGCGGTATCGACTTTAAGG----GTGTTAATTTGGTTGTCAATTACGACTTTC 1496 consensus_9307#1 AATAANGAAGCGAAGGATTCTTCGAGTGACGATTCGGGAAGGCGAACAGGAGGAACCGGG 381 * * ** consensus_9307#2 CGCCGTCCACCATATCGTATGTCC-ATCGTATCGGACGGACGGGT-CGCGCCGGTC-GAC 272 consensus_9307#3 CACCAAAGACGATACGGTTAATCTGAAAAGGTTTGGCGAAAAAATGCGACCCCATT-GAT 84 consensus_9307#0 CGCCGTCCACCATATCGTATGTCC-ATCGTATCGGACGGACGGGT-CGCGCCGGTC-GAC 1553 consensus_9307#1 AGGCAGCNA--AAAAGATCAGTGCAAACAGAAGNGACAAGATTGTACCTCCGGAGAAGGT 439 * * * * * * * * * * * * * consensus_9307#2 CCGGGAAAGCTGTCACCTTTTTCACCAAAGAGGAT----ACGGTTAATCTGAAAAGCATT 328 consensus_9307#3 ACGATTGT-TTGCAACGCGAATGCTCTAATCGGG-------GTTTTGTTTGTGTAGCATT 136 consensus_9307#0 CCGGGAAAGCTGTCACCTTTTTCACCAAAGACGAT----ACGGTTAATCTGAAAAGCATT 1609 consensus_9307#1 ACGAGCGTGATCAATCAGNTTCGCTTGAATCGGNNTGCGAAACCAAGNTCGAGAAAGTCC 499 ** * * ** * * * consensus_9307#2 GCACAGCTGATAAAATCTGCAGGTGGG----GAGGTGCCGGACTACATGCTGCAAATGCA 384 consensus_9307#3 GCACAGCTGATAAAATCTGCAGGTGGG----GAGGTGCCGGACTACATGCTGCAAATGCA 192 consensus_9307#0 GCACAGCTGATAAAATCTGCAGGTGGG----GAGGTGCCGGACTACATGCTGCAAATGCA 1665 consensus_9307#1 ATGTGAAGAAAAAAGTCGACACAGGGCCCCCGGAAAGGTGGGCGCCAAGCAATCANTCGN 559 * *** ** ** ** * * ** * ** ** * * consensus_9307#2 TGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCA-TGA 443 consensus_9307#3 TGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCA-TGA 251 consensus_9307#0 TGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCA-TGA 1724 consensus_9307#1 AAATCGGTGGGCGGAGTC-CAANGGGTTCAAGGCGACANTGAACATAATCGAGGTAGTGG 618 * * * * * ** * * * ** ** * * * ** ** ** * * ** consensus_9307#2 TTCGAACGATTCCTACGTTCGAGCTTCA-ACAGCTCCAGCGCAAAAAGCGGTTCGTCAGC 502 consensus_9307#3 TTCGAACGATTCCTACGTTCGAGCTTCA-ACAGCTCCAGCGCAAGAAGCGGTTTGTCAGC 310 consensus_9307#0 TTCGAACGATTCCTACGTTCGAGCTTCA-ACAGCTCCAGCGCAAGAAGCGGTTCGTCAGC 1783 consensus_9307#1 TNCGGAAAA--CCGGGGTTTGGGGTTGGGNCGAAAACANTTTCAGAAGGCTTGCNTTA-C 675 * ** * * ** *** * * ** * ** * *** * * * * consensus_9307#2 AAAAGCAAAGGTAAAAATAAACCACTCGTGGTTAGTAGTAACAGTAGTAACAAAAGTG-- 560 consensus_9307#3 AAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGT--------------- 355 consensus_9307#0 AAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCA 1843 consensus_9307#1 NAAGGTCACACCAGGAGANNCACACAGGTGGGCACAATNGGAAAG--------------- 720 ** * * * * * * **** * * * consensus_9307#2 ------------------------------------------------------------ consensus_9307#3 ------------------------------------------------------------ consensus_9307#0 AACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAGTGCGGCAC 1903 consensus_9307#1 ------------------------------------------------------------ consensus_9307#2 -------- consensus_9307#3 -------- consensus_9307#0 CATTATTA 1911 consensus_9307#1 -------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||