These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9320#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1700 fasta sequence [CCGGGTGCTGTTAACGGAGGCCGGATAGATCTGTTTCTAATCGCGTCCCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCGACGAGGCCGGCAACCTGATCTTCAACAAGTCGGCGCGCAACTTCAACCCGCCCATGTGCAAGGCGGCCAAGGTGACGATCGTGGAGGTGGAGGAGATCGTGCCGGTCGGTTCGCTCGACCCGGACCAGGTGCACATGCCGAGCGTGTTCGTGCATCGCATCATCAAGGGCCCGTCGTACGAGAAGCGCATCGAGCGGTTGCGGGTGCGGGACGCGAAAAAGGCGGGG-GCGTCGGTGGTGTCGTCCACGCCGGCCGCCAGGATGCGCGAGCGGATCGTGAAGC-GGGTGGCGATGGAGTACCGGGACGGTATGCACATCAACCTGGGCATCGGCATACCGGTGCTGTCGTCGAACTACATTCCGGCCGGCATGAATGTGCTGCTGCAGTCGGAGAACGGCATCCTGGGGTTGGGCCCGTTCCCCCGAGAAGGACCGCGTCGATCCCGGTCTGATCAATGCGGGCAAGGAAACGGTGACGGTACTGCCGGGTGCGTCCTACTTCTCGTCCGACGACAGCTTTGCGATGATTCGCGGCGGCCACATCGACATTACGGTGCTCGGTGCGATGGAGGTGTCGCAGTACGGTGATCTGGCCAACTGGATGATTCCCGGTAAGCTGGTGAAGGGTATGGGAGGCGCAATGGATCTTGTGGCTGCCCCCGGCACCAAAGTGATCGTGACGATGGAACACAACGCCAAGGACGGTTCACACAAGATTCTGTCCAACTGCAACCTGCCCGTGACGGGCCGGAACTGCGTCGACATGATCATCACCGAGAAGGCCGTGTTCAACGTGGACAAGGAGCGGGGCCTGACGCTGATGGAGCTGGCGGAGGACTGCACCGTGGAGGAGGTCATTACCAGCACCGGTTGCGAGTTTTCCGTTTCACCCGACCTGAAG] [+] EMBL BM628255 [CCGGGTGCTGTTAACGGAGGCCGGATAGATCTGTTTCTAATCGCGTCCCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCGGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGAAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAA ] [+] EMBL BM619732 [ ccgAACGGAGGCCGGATAGATCTGTTTCTAATCGCGTCCCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCTGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATC ] [+] EMBL BM598623 [ ccgATCGCGTCCCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTG ] [+] EMBL BM613548 [ CCG GCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCGTACGGTACGCTCGTGCACGAAGGCGGCTCGCCGATCAAGTACGGGCCGGGCGGGACGATCGAGATCGCGAGCGAACCGCGCCCG ] [+] EMBL BM654000 [ ccgCACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAG ] [+] EMBL BM636374 [ ccGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCGACGAGGCCGGCAACCTGATCTTCAACAAGTCGGCGCG ] [+] EMBL BM640153 [ ccgGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCGACGAGGCCGGCAACCTGATCTTCAACAAGTCGGCGCGCAACTTCAACCCGCCCATGTGCAAGGCGGCCAAGGTGACGATCGTGGAGGTGGAGGAGATCGTGCCGGTCGGTTCGCTCGACCCGGACCAGGTGCACATGCCGAGCGTGTTCGTGCATCGCATCATCAAGGGCCCGTCGTACGAGAAGCGCATCGAGCGGTTGCGGGTGCGGGACGCGAAAAAGGCGGGG GCGTCGGTGGTGTCGTCCACGCCGGCCGCCAGGATGCGCGAGCGCATCGTGAAGCGGGGTGGC ] [+] EMBL BM619795 [ ccGCTCGCCGATCAAGTACGGCCCGGGCGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTAAAGGCGCACGTGGCCGACGAAGCCGGCAACCTGATCTTCAACAAGTCGGCGCGCAACTTCAACCCGCCCATGTGCAAGGCGGCCAAGGTGACGATCGTGGAGGTGGAGGAGATCGTGCCGGTCGGTTCGCTCGACCCGGACCAGGTGCACATGCCGAGCGTGTTTGTGCATCGCATCATCAAGGGCCCGTCGTACGAGAAGCGCATCGAGCGGCTGCGGGTGCGGGACGCGAAAAAGGCGGGC GCGTCGGTGGTATCTTCCACGCCGGCCGCCAAGATGCGCGAGCGGATCGTGAAGC GGGTGGCGATGGAGTACCGGGACGGTATGCACATCAACCTGGGCATCGGCATACCGGTGCTGTCGTCGAACTACATTCCGGCCGGCATGAATGTGCTGCTGCAGTCGGAGAACGGCATCCTGGGGTTGGGCCCGTTCCCCCGAGAAGGACCGCGTCGATCCCGG ] [+] EMBL BM583994 [ cCGGGGCGCGTCAGTGGTGTCGTCCACGCCGGCCGCCAGGATGCGCGAGCGGATCGTGAAGC GGGTGGCGATGGAGTACCGGGACGGTATGCACATCAACCTGGGCATCGGCATACCGGTGCTGTCGTCGAACTACATTCCGGCCGGCATGAATGTGCTGCTGCAGTCGGAGAACGGCATCCTGGGGTTGGGTCCGTT CCCCGAGAAGGACCGCGTCGATCCGGATCTGATCAATGCGGGCAAGGAAACGGTGACGGTACTGCCGGGTGCGTCCTACTTCTCGTCCGACGACAGCTTTGCGATGATTCGCGGCGGCCACATCGACATTACGGTGCTCGGTGCGATGGAGGTGTCGCAGTACGGTGATCTGGCCAACTGGATGATTCCCGGTAAGCTGGTGAAGGGTATGGGAGGCGCAATGGATCTTGTGGCTGCCCCCGGCACCAAAGTGATCGTGACGATGGAACACAACGCCAAGGACGGTTCACACAAGATTCTGTCCAACTGCAACCTGCCCGTGACGGGCCGGAACTGCGTCGACATGATCATCACCGAGAAGGCCGTGTTCAACGTGGACAAGGAGCGGGGCCTGACGCTGATGGAGCTGGCGGAGGACTGCACCGTGGAGGAGGTCATTACCAGCACCGGTTGCGAGTTTTCCGTTTCACCCGACCTGAAG] consensusID : consensus_9320#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 690 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCC-GGGCC-GGGGGGT-GCCGGCGTTCCCGCCTTCTTCACACCGACCGCGTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGCGGGCACGATCGAGATCGCGAGCGAA] [+] EMBL BM603378 [CCGCCCACGCGTCCGCCCACGCGTCCGCGAGCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCC GGGCC GGGGGGT GCCGGCGTTCCCGCCTTCTTCACACCGACCGCGTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGCGGGCACGATCGAGATCGCGAGCGAA] [+] EMBL BM630897 [ CCGCCCACGCGTCCG GCCGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTG ] [+] EMBL BM605024 [ ccgGTGCGCTAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGGCCGGGGGGGTGGCCGGCGT ] consensusID : consensus_9320#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCCGGGGGGTGCCGGCGTT] [+] EMBL BM631000 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAATTGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGTGCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACTGGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTATCCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTCCAACAATGCCGGTGTGGACACATTCGGGCTCGGGCTGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCCGGGGGGTGCCGGCGTT] consensusID : consensus_9320#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 398 fasta sequence [GATTCGGCACGAGGATCNATGCCGGTGTGGACACATTCGGGCTCGGGGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCNATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCCGACGAN] [+] EMBL BX619182 [GATTCGGCACGAGGATCNATGCCGGTGTGGACACATTCGGGCTCGGGGCTGCTGAAGGAGAAGCTGATCAAGCGCATGATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGTCGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGGCACGCTGGCCGAGCGTATCCGGGCCGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTGCACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGGACGATCGAGATCGCGAGCGAACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCNATGGAGGAAGCGATCACGGGCGACTTTGCGCTGGTGAAGGCGCACGTGGCCCGACGAN] consensusID : consensus_9320#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 381 fasta sequence [GCCCCGAGTGGCTCGCGTACATTAGTTTAACTCGCGCAAGCACCTGTTACGTCATTGGTGGAATAAATAGAACGTTGCCTCCGTAAATACAACTGTAAACGTTTTGCTACAAAGTAGCAAAACGATCGGCAAACGCAAATGACGTTGCATGGTTTCATATAGATGCCGAGAATGTGACGCCAAACCAAAGCAAGGGGTAACATCCCGATCAGATCGACCCGTCGTGAACCGGTACTGGCCTGCGGTATTCGACGCAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGGTGGTCGGGGGTTCGGGCTGTGCGGTATTCCGGAGAACCTGATTGCGGGCTGGTAC] [+] EMBL AL694553 [GCCCCGAGTGGCTCGCGTACATTAGTTTAACTCGCGCAAGCACCTGTTACGTCATTGGTGGAATAAATAGAACGTTGCCTCCGTAAATACAACTGTAAACGTTTTGCTACAAAGTAGCAAAACGATCGGCAAACGCAAATGACGTTGCATGGTTTCATATAGATGCCGAGAATGTGACGCCAAACCAAAGCAAGGGGTAACATCCCGATCAGATCGACCCGTCGTGAACCGGTACTGGCCTGCGGTATTCGACGCAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGCGATCGCAGACATTCCCGACGGTGCGAAACTGGTGGTCGGGGGTTCGGGCTGTGCGGTATTCCGGAGAACCTGATTGCGGGCTGGTAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9320#0 CCGGGTGCTGTTAACGGAGGCCGGATAGATCTGTTTCTAATCGCGTCCCGAGCCGTGCGC 60 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ---------------------CCGCCCACGCGTCCGCCCACGCGTCCGCGAGCCGTGCGC 39 consensus_9320#2 -----------------------------------CCGCCCACGCGTCCGCCCACGCGTC 25 consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 TAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCCTACGTTTCGCTTTCGGGAAAT 120 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 TAGTCCTTTACACACCGTACCACCTGGTGCCGCGCGTCGTACGTTTCGCTTTCGGGAAAT 99 consensus_9320#2 CGCCCACGCGTCCGCCCACGCGTCCGGTGCCGCGCGTCCTACGTTTCGCGTTCGGGAAAT 85 consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 TGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGT 180 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 TGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGT 159 consensus_9320#2 TGTTTCTAGTGCAAAACACAACAACAACACGATGGCACTGTCGCTGTGCAGAAAGCAAGT 145 consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 GCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACT 240 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 GCTCGGTGCGACCTGCCGGCTGAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACT 219 consensus_9320#2 GCTCGGTGCGACCTGCCGGCTAAACAGCAGAATATTGCAGTTCGAAATTTCAAAGGTACT 205 consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 GGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGC 300 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 GGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGC 279 consensus_9320#2 GGCCTGCCGGTATTCGACGCAAAAGAAGCGCTCCAAAATCTACGCCAGCGCGGACGAAGC 265 consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 GATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTAT 360 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 GATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGCAT 339 consensus_9320#2 GATCGCAGACATTCCCGACGGTGCGAAACTGCTGGTCGGCGGGTTCGGGCTGTGCGGTAT 325 consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 CCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTC 420 consensus_9320#3 -------------------------------------------GAT-TCGGCACGAGG-- 14 consensus_9320#1 CCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTGGTGTC 399 consensus_9320#2 CCCGGAGAACCTGATTGCGGCGCTGGTAGCGCAGCGCAAAAAAGATCTCACCGTAGTGTC 385 consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 CAACAATGCCGGTGTGGACACATTCG---GGCTCGGGCTGCTGCTGAAGGAGAAGCTGAT 477 consensus_9320#3 -ATCNATGCCGGTGTGGACACATTCG---GGCTCGGG--GCTGCTGAAGGAGAAGCTGAT 68 consensus_9320#1 CAACAATGCCGGTGTGGACACATTCG---GGCTCGGGCTGCTGCTGAAGGAGAAGCTGAT 456 consensus_9320#2 CAACAATGCCGGTGTGGACACATTCG---GGCTCGGGCTGCTGCTGAAGGAGAAGCTGAT 442 consensus_9320#4 -GCCCCGAGTGGCTCGCGTACATTAGTTTAACTCGCGCAAGCACCTGTTACGTCATTGGT 59 * ** * ***** * **** * * * ** * consensus_9320#0 CAAGCGCAT-GATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGT 536 consensus_9320#3 CAAGCGCAT-GATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGT 127 consensus_9320#1 CAAGCGCAT-GATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGT 515 consensus_9320#2 CAAGCGCAT-GATCGCATCGTACGTCGGCGAGAATGCCGAATTCGAGCGGCAGTATCTGT 501 consensus_9320#4 GGAATAAATAGAACGTTGCCTCCGTAAATACAACTGTAAACGTTTTGCTACAAAGTA-GC 118 * ** ** ** * * *** * ** * * ** ** * * consensus_9320#0 CGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGG---CACGCTG--GCCGAGCGTATCCG 591 consensus_9320#3 CGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGG---CACGCTG--GCCGAGCGTATCCG 182 consensus_9320#1 CGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGG---CACGCTG--GCCGAGCGTATCCG 570 consensus_9320#2 CGGGCGAGCTGGAGCTCGAGCTGACGCCGCAGGG---CACGCTG--GCCGAGCGTATCCG 556 consensus_9320#4 AAAACGATCGGCAAACGCAAATGACGTTGCATGGTTTCATATAGATGCCGAGAATGTG-A 177 *** * * * * ***** *** ** ** * ****** * * consensus_9320#0 GGCC-GGGGG-TGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTG 649 consensus_9320#3 GGCC-GGGGG-TGCCGGCGTTCCCGCCTTCTTCACACCGACCGCCTACGGTACGCTCGTG 240 consensus_9320#1 GGCC-GGGGGGTGCCGGCGTTCCCGCCTTCTTCACACCGACCGCGTACGGTACGCTCGTG 629 consensus_9320#2 GGCCCGGGGGGTGCCGGCGTT--------------------------------------- 577 consensus_9320#4 CGCCAAACCAAAGCAAGGGGTAACATCCCGATCAGATCGACCCGTCGTGAACCGGTACTG 237 *** ** * * * consensus_9320#0 CACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGG-ACGATCGAGATCGCGAGCGA 708 consensus_9320#3 CACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGTGGG-ACGATCGAGATCGCGAGCGA 299 consensus_9320#1 CACGAGGGCGGCTCGCCGATCAAGTACGGCCCGGGCGGGCACGATCGAGATCGCGAGCGA 689 consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 GCCTGCGGTA-TTCGACGCAAAGAAGCGCTCCAAA-----ATCTACGCCAGCGCGGACGA 291 consensus_9320#0 ACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCA-TGGAGGAAGCGATCACGG 767 consensus_9320#3 ACCGCGCCCGATGCAGCTGTTCAACGGCAAGCCGTACATCNATGGAGGAAGCGATCACGG 359 consensus_9320#1 A----------------------------------------------------------- 690 consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 AGCGATCGCAG---ACATTCCCGACGGTGCGAAACTGGTGGTCGGGGGTTCGGGCTGTGC 348 consensus_9320#0 GCGACTTTGCGCTGGTGAAGGCGCACGTGGCC-GACGAGGCCGGCAACCTGATCTTCAAC 826 consensus_9320#3 GCGACTTTGCGCTGGTGAAGGCGCACGTGGCCCGACGAN--------------------- 398 consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 GGTATT-----CCGGAGAACCTGATTGCGGGCTGGTAC---------------------- 381 consensus_9320#0 AAGTCGGCGCGCAACTTCAACCCGCCCATGTGCAAGGCGGCCAAGGTGACGATCGTGGAG 886 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 GTGGAGGAGATCGTGCCGGTCGGTTCGCTCGACCCGGACCAGGTGCACATGCCGAGCGTG 946 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 TTCGTGCATCGCATCATCAAGGGCCCGTCGTACGAGAAGCGCATCGAGCGGTTGCGGGTG 1006 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 CGGGACGCGAAAAAGGCGGGGGCGTCGGTGGTGTCGTCCACGCCGGCCGCCAGGATGCGC 1066 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 GAGCGGATCGTGAAGCGGGTGGCGATGGAGTACCGGGACGGTATGCACATCAACCTGGGC 1126 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 ATCGGCATACCGGTGCTGTCGTCGAACTACATTCCGGCCGGCATGAATGTGCTGCTGCAG 1186 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 TCGGAGAACGGCATCCTGGGGTTGGGCCCGTTCCCCCGAGAAGGACCGCGTCGATCCCGG 1246 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 TCTGATCAATGCGGGCAAGGAAACGGTGACGGTACTGCCGGGTGCGTCCTACTTCTCGTC 1306 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 CGACGACAGCTTTGCGATGATTCGCGGCGGCCACATCGACATTACGGTGCTCGGTGCGAT 1366 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 GGAGGTGTCGCAGTACGGTGATCTGGCCAACTGGATGATTCCCGGTAAGCTGGTGAAGGG 1426 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 TATGGGAGGCGCAATGGATCTTGTGGCTGCCCCCGGCACCAAAGTGATCGTGACGATGGA 1486 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 ACACAACGCCAAGGACGGTTCACACAAGATTCTGTCCAACTGCAACCTGCCCGTGACGGG 1546 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 CCGGAACTGCGTCGACATGATCATCACCGAGAAGGCCGTGTTCAACGTGGACAAGGAGCG 1606 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 GGGCCTGACGCTGATGGAGCTGGCGGAGGACTGCACCGTGGAGGAGGTCATTACCAGCAC 1666 consensus_9320#3 ------------------------------------------------------------ consensus_9320#1 ------------------------------------------------------------ consensus_9320#2 ------------------------------------------------------------ consensus_9320#4 ------------------------------------------------------------ consensus_9320#0 CGGTTGCGAGTTTTCCGTTTCACCCGACCTGAAG 1700 consensus_9320#3 ---------------------------------- consensus_9320#1 ---------------------------------- consensus_9320#2 ---------------------------------- consensus_9320#4 ---------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||