These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9321#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1997 fasta sequence [CCGAAGAAAACAAACCTCGATTTTGACAATGTTGTATAA-TAT-ACGATAAACGAAACAAAAACCAAAAACGTTTTTCCTCTTCCACCATTCTCGAGAGTACATTTAGTGCGCTTCGTAAGATTCCTAGCTCTATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTGCAGTGAAGTTAGAAATGTCGTGTAACGCAACTTCCTGTCTTGCTTGATGCCCAATGATTCCTTTCTAAACCGTAACAAACAAACTGAAAATAAATGTTGAAAGAAGAAGAAAGAGTATGAACCACATAGAACGAACAGCAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACACAGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCAGCTACAGTAGTAACAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTACCCAGAAACAAACAAAACAAAAAAGAATCAGAAAAGTGTATA-TTTTTATACTCCTTATACGAAGACGTGATTATTGAAAGAGTAGACAAACAGACGAACGAAAGAAACCATGAAAGGCAAAGAATAGAGAA-GGAGCAAATAC-AAAGAAACAAAACAACAAATAACA-----CAA-CAA-CAA-CAGTAG-CAA-CCAAAAT-AT-CACACACCCCACACACACACTAT-CNNNCTCTAACACACAATTATATAATTT-CACGTAT--AAATAT-GT-AATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACG-TTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAAACACTCATGTCAAAGAAAATCGTTAACNAGATAATAGAAAACAGAAAAGCGTAAAACAGGAGGAACACAATACAATACGACGAACAAAAAAAAAAAAACAAATGCGAATATGATTTCAAAACGAAAACAATAACAAACAAACAGAGATGCGCGCGTACAAATGAAAACCAGAAACTATAAAATAAAACCAAGACAGTCGCACCTTTCTCCTTCACATCGTCCCATCCCGTCCCATTGCACCTCCACTCTAGGCTAGAAGATTTGCTCCGGATGCATTAGTAATCTCGAATTAGTGTCATGTTGATTATAATCCATTTCGCGTGATGAAAGCCCCGAATGTTACATAAAAGATACCATCAAGTGTACGGTGGGAGGCAGGAAATATTCACAACTCACAACTCACGAATAACAATCGGTTCAATGGTCAGTAAAAAAAAATCCCTTAACACTGCGTAAATCACAATGTAAGCCCCTTCCGACCCAACTAACCAGCAACACACACACACACACACACTTATATTAGCCGGCGACAGCGGTGTGTATGAATGATGCAAGATGATGTTTTCTGATTTCAATAAAGTATAACTGAAGCGATCAATAAATGT] [+] EMBL BM647778 [CCGAAGAAAACAAACCTCGATTTTGACAATGTTGTATAA TATAACGATAAACGAAACAAAAACCAAAAACGTTTTTCCTCTTCCACCATTCTCGAGAGTACATTTAGTGCGCTTCGTAAGATTCCTAGCTCTATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTGCAGTGAAGTTAGAAATGTCGTGTAACGCAACTTCCTGTCTTGCTTGATGCCCAATGATTCCTTTCTAAACCGTAACAAACAAACTGAAAATAAATGTTGAAAGAAGAAGAAAGAGTATGAACCACATAGAACGAACAGCAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACACAGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCAGCTACAGTAGTAACAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTACCCAGAAACAAACAAAACAAAAAAGAATCAGAAAAGTGTATATTTTTTATACTCCTTATACGAAGACGTGATTATTGAAAGAGTAGACAAACAGACGAACGAAAGAAACCATGAAAGGCAAAGAATAGAGAA GGAGCAAATACTAAAGAAACAAAACAACAAATAACA CAA CAA CAA CAGTAG CAA CCAAAAT A ] [+] EMBL AGAA13345 [ gttccgGTATAACTAT TCGATAAACGAAACAAAAACCAAAAACGTTTTTCCTCTTCCACCATTCTCGAGAGTACATTTAGTGCGCTTCGTAAGATTCCTAGCTCTATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTACAGTGAAGTTAGAAATGTCGTGTAAGCCAACTTCCTGTCTTGCTTGATGCCCAATGATTCCTTTCTAAACCGTAACAAACAAACTGAAAATAAATGTTGAAAGAAGAAGAAAGAGTATGAACCACATAGAACGAACAACAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACACAGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCAGCTACAGTAGTAACAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTACCCAGAAACAAACAAAACAAAAAAGAATCAGAAAAGTGTATA TTTTTATACTCCTTATACGAAGACGTGATTATTGAAAGAGTAGACACACAGACGAACGAAAGAAACCATTAAAGGCAAAGAATAGAGAAGGGAGCAAATAC AAAGGAACCAAACAACAAATAACACCAACCAACCAACCAACCAGTAGCCAACCCAAAAT AT CACACACCCCACACACACACTAT CNNNCTCTAACACACAATTATATAATTT CACGTAT AAATAT GT AATCTAGCAC ATAAGAGCATT GGGCGAGCG AAAGACCAGA TGTAGAGACAGGTGACGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTTGTACCCCGTTCACGTCA CCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTAC TACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTACGTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCT GAAACGCTCCATAAATCTTGGGACGA CCCAACTC AAATT GGT AACCAAATATTCTTGCGAAGCGAAGCAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATG TTTTTTCTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAAACACTCATGTCAAAGAAAATCGTTAACAAGATAATAGAAAACAGAAAAGCGTAAAACAGGAGGAACACAATACAATACGACGAACAAAAAAAAAAAAA ] [+] EMBL BM645788 [ ccgCCTAGCTCTATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTGCAGTGAAGTTAGAAATGTCGTGTAACGCAACTTCCTGTCTTGCTTGATGCCCAATGATTCCTTTCTAAACCGTAACAAACAAACTGAAAATAAATGTTGAAAGAAGAAGAAAGAGTATGAACCACATAGAACGAACAGCAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACACAGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCAGCTACAGTAGTAACAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTACCCAGAAACAAACAAAACAAAAAAGAATCAGAAAAGTGTATATTTTTTATACTCCTTATACGAAGACGTGATTATTGAAAGAGTAGACAAACAGACGAACGAAAGAAACCATGAAAGGCAAAGAATAGAGAA GGAGCAAATACAAAAGAAACAAAACAACAAATAACA CAA CAA CAA CAGTAG CGA CCAAAATAATCCACACA CCCACACACACA TATACACACACT CACACAACAGCATCATTTGCATGTGA AGCAAT GTCAATGTAG TGAAGCAGAGCAaaa ] [+] EMBL BX622586 [ tc CACGTATAAAAATATGGT AATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACG TTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAAACACTCATGTCAAAG AAATCGTTAACCAGATA ] [+] EMBL BX627984 [ AATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACG TTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAAACACTCATGTCAAAGAAAATCGTTAACNAGATAATAGAAAACAGAAAAGCGTAAAA ] [+] EMBL BM609929 [ ccgAGATAATAGAAAACAGAAAAGCGTAAAACAGGAGGAACACAATACAATACGACGAACAAAAAGAAAAAAACAAATGCGAATATGATTTCAAAACGAAAACAATAACAAACAAACAGAGATGCGCGCGTACAAATGAAAACCAGAAACTATAAAATAAAACCAAGACAGTCGCACCTTTCTCCTTCACATCGTCCCATCCCGTCCCATTGCACCTCCACTCTAGGCTAGAAGATTTGCTCCGGATGCATTAGTAATCTCGAATTAGTGTCATGTTGATTATAATCCATTTCGCGTGATGAAAGCCCCGAATGTTACATAAAAGATACCATCAAGTGTACGGTGGGAGGCAGGAAATATTCACAACTCACAACTCACGAATAACAATCGGTTCAATGGTCAGTAAAAAAAAATCCCTTAACACTGCGTAAATCACAATGTAAGCCCCTTCCGACCCAACTAACCAGCAACACACACACACACACACACTTATATTAGCCGGCGACAGCGGTGTGTATGAATGATGCAAGATGATGTTTTCTGATTTCAATAAAGTATAACTGAAGCGATCAATAAATGT] consensusID : consensus_9321#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1753 fasta sequence [CCGGAAGGAGCAAATACAAAAGGAACAAAACAACAAATAACACAACAACAACAACAGTAGCAACCAAAATAATCCACACACCCACACACACATATACACACACTCACACAACAGCGTCATTTGCATGTGAAGCAATGTCAATGTAGTGAAGCAGAGCAAAATAGGCTGTAACATGATAGAAATGATTCGTAGTGTGATGATGACGATGATGATGATGATAGCGAGCAGCGAGAGATACCACAGTGCTTGACAGGAGTAAGGTGAAGGGTGAAACAGTGTCTAACAAAATCACATACACCATCTAGACAAATATTCAGTGTGCG---TGTGCACTAGAAGAAAATCAAGTAAATCGAGTACATTATTTGTTTTTGCATGCCACGAAAGGCA---TACAATAACAACCGATTGATCGATGGGGAAAGCTCCCGTGCTCGTGTTCAAGTTTT-TTTTCTGTAACCGTTCCACAGTGGCATATGTGTGTATGTATGTGTAACGATATTGAGATTGCATTTATTGAGCCAACAGTCCAAACGCTCCAATATTATGTTTGTTCAACAACTCACTTTTTTGCAGGTGTGATTAAAAAAGGGAAAATTAATCAGTGAAAGTGACAACATCCCACAAACAAATACTATAACCAATAACNAATACCATAGACACAGGTGGAAATCAACAATGGAAAATCGAAACAAAGAACCAGATAGAATGTTACCAAGCAATGAAAATTGATAAACGTACAGGAAACATAAACAAAAAACAAAACAAATGAAGAGAAATGAGAAAAAAAGTAACACAGCAACAGCAAAACCATACAAGTAAATTACACGAAATCCCGTTCGATAATGAAGATAAAAAAAACACACAGAAAGGAGGATCGAACAACAATAGAGTAAGAAAAGTAACAACGTACAACGCAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTATAACGACTACAACAAAATCGTAAACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATCTAGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACAGTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTTAGGTTTAGCTCCCGGTTTATTGATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCAATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCATTCGTCCCATTCGGGAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAATTATGGGAAAATCCTGCAATTGTCCATTATCGGTTTCTTACTCACAGTGCAGCGGAGAATGTATTGAATTGATAAACTATGTTTTTTTTCTCTGTTTCTGTTTTGGTCTACTATCTTTGCTGCGTGACAGCGCTATGATTAATGAAAAC] [+] EMBL BM619111 [CCGGAAGGAGCAAATACAAAAGGAACAAAACAACAAATAACACAACAACAACAACAGTAGCAACCAAAATAATCCACACACCCACACACACATATACACACACTCACACAACAGCGTCATTTGCATGTGAAGCAATGTCAATGTAGTGAAGCAGAGCAAAATAGGCTGTAACATGATAGAAATGATTCGTAGTGTGATGATGACGATGATGATGATGATAGCGAGCAGCGAGAGATACCACAGTGCTTGACAGGAGTAAGGTGAAGGGTGAAACAGTGTCTAACAAAATCACATACACCATCTAGACAAATATTCAGTGTGCG TGTGCACTAGAAGAAAATCAAGTAAATCGAGTACATTATTTGTTTTTGCATGCCACGAAAGGCA TACAATAACAACCGATTGATCGATGGGGAAAGCTCCCGTGCTCGTGTTCAAGTTTT TTTTCTGTAACCGTTCCACAGTGGCATGTATGTGTATGTATGTGTAACGATATTGAGATTGCATTTATTGAGCCAACAGTCCAAACGCTCCAATATTATGTTTGTTCAACAACTCACTTTTTTGCAGGTGTGATTAAAAAA ] [+] EMBL BM647131 [ ccgGGCTGTAACATGATAGAAATGATTCGTAGTGTGATGATGACGATGATGATGATGATAGCGAGCAGCGAGAGATACCACAGTGCTTGACAGGAGTAAGGTGAAGGGCGAAACAGTGTCTAACAAAATCACATACACCATCTAGAGAAATATTCAGTGTGCGTGTTGTGCACTAGAAAAAAATCAAGTAAATCGAGTAAATTATTGATTTTTGCATGGCATGAAAGGTACGGTACAGTAACAGCCGATTGATCGATGGGGAAAGCTCCCGTGCTCGTGTTCAAGTTTTGTTTTCTGTAACCGTTCCACAGTGGC ATGTGTGTATGTAT ] [+] EMBL BX621540 [ ATGTGTGTATGTATGTGTAACGATATTGAGATTGCATTTATTGAGCCAACAGTCCAAACGCTCCAATATTATGTTTGTTCAACAACTCACTTGTTTGCAGGTGTGATTAAAAAAGGGAAAATTAATCAGTGAAAGTGACAACATCCCACAAACAAATACTATAACCAATAACNAATACCATAGACACAGGTGGAAATCAACAATGGAAAATCGAAACAAAGAACCAGATAGAATGTTACCAAGCAATGAAAATTGATAAACGTACAGGAAACATAAACAAAAAACAAAACAAATGAAGAGAAATGAGAAAAAAAGTAACACAGCAACAGCAAAACCATACAAGTAAATTACACGAAATCCCGTTCGATAATGAAGATAAAAAAAACACACAGAAAGGAGGATCGAACAACAATAGAGTAAGAAAAGTAACAACGTACAACGCAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTATAACGACTACAACAAAATCGTAAACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATCTAGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGNATGTCTGGTTTGATGTTTGATTGTTTCACTGTGCNAGTCGATTTTGTCACG AAATATCNATAGTAACG ] [+] EMBL BM627624 [ ccgCACAATTTATATAATTTCCACGTATAAAAATATCTAGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACAGTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTTAGGTTTAGCTCCCGGTTTATTGATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCAATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCATTCGTCCCATTCGGGAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAATTATGGGAAAATCCTGCAATTGTCCATTATCGGTTTCTTACTCACAGTGCAGCGGAGAATGTATTGA ] [+] EMBL BM603081 [ ccgACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACAGTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTTAGGTTTAGCTCCCGGTTTATTGATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCAATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCATTCGTCCCATTCGGGAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAATTATGGGAAAATCCTGCAATTGTCCATTATCGGTTTCTTACTCACAGTGCAGCGGAGAATGTATTGAATTGATAAACTATGTTTTTTTTCTCTGTTTCTGTTTTGGTCTACTATCTTTGCTGCGTGACAGCGCTATGATTAATGAAAAC] [+] EMBL BM601371 [ ccgACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACAGTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTTAGGTTTAGCTCCCGGTTTATTGATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCAATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGG ] consensusID : consensus_9321#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 935 fasta sequence [AGAAATGAGAACAAAAGCAAAACCATACAAGTAAATTAAACGTAATACCGTTCGATAATGAAAATTTAAAAACACACACACAGAAAAGAGGGTCGAACAACAATAGAGTAAGAAAAGTAACAACGTGGCACGGAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTACAACGATTACAACAAAATCGT-AACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATGGTAATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGGTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGGAAACGCCTTTCGGGTGGGACATGAAAGC] [+] EMBL BX609914 [AGAAATGAGAACAAAAGCAAAACCATACAAGTAAATTAAACGTAATACCGTTCGATAATGAAAATTTAAAAACACACACACAGAAAAGAGGGTCGAACAACAATAGAGTAAGAAAAGTAACAACGTGGCACGGAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTACAACGATTACAACAAAATCGTAAACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATTGTAATTTAGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCGCTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCC ] [+] EMBL BX621351 [ AAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTATAACGACTACAACAAAATCGT AACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATGGTAATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGGTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGGAAACGCCTTTCGGGTGGGACATGAAAGC] [+] EMBL BM590132 [ ccgAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATGGTAATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGGTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9321#1 CCGGAAGGAGCAAATACAAAAGGAACAAAACAACAAATAACACAACAACAACAACAGTAG 60 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 ------------------------------------------------------------ consensus_9321#1 CAACCAAAATAATCCACACACCCACACACACATATACACACACTCACACAACAGCGTCAT 120 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 ------------------------------------------------------------ consensus_9321#1 TTGCATGTGAAGCAATGTCAATGTAGTGAAGCAGAGCAAAATAGGCTGTAACATGATAGA 180 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 ------------------------------------------------------------ consensus_9321#1 AATGATTCGTAGTGTGATGATGACGATGATGATGATGATAGCGAGCAGCGAGAGATACCA 240 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 ------------------------------------------------------------ consensus_9321#1 CAGTGCTTGACAGGAGTAAGGTGAAGGGTGAAACAGTGTCTAACAAAATCACATACACCA 300 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 ---------------------------------------CCGAAGAAAACAAAC-CTCGA 20 consensus_9321#1 TCTAGACAAATATTCAGTGTGCGTGTGCACTAGAAGAAAATCAAGTAAATCGAGTACATT 360 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 TTTTGACAA-TGTT--GTATA-ATATACGATAAACGAAA--CAA--AAACCAAAAACGTT 72 consensus_9321#1 ATTTGTTTTTGCATGCCACGAAAGGCATACAATAACAACCGATTGATCGATGGGGAAAGC 420 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 -TTTCCTCTTCCACCATTCTCGAGA-GTACATTTAGTGCGCTTCGTAAGATTCCTAGCTC 130 consensus_9321#1 TCCCGTGCTCGTGTTCAAGTTTTTTTTCTGTAACCGTTCCACAGTGGCATATGTGTGTAT 480 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 TATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTGCAGTGAAGTTAGAAAT 190 consensus_9321#1 GTATGTGTAACGATATTGAGATTGCATTTATTGAGCCAACAGTCCAAACGCTCCAATATT 540 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 GT-CGTGTAACGCAACTT--CCTGTCTTGCTTGAT------GCCCAATGATTCCTTTCTA 241 consensus_9321#1 ATGTTTGTTCAACAACTCACTTTTTTGCAGGTGTGATTAAAAAAGGGAAAATTAATCA-G 599 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 AACCGTAACAAACAAACTGAAAATAAAT-GTTGAAAGAAGAAGAAAGAGTATGAACCACA 300 consensus_9321#1 TGAAAGTGACAACATCCCA-CAAACAAATACTATAACCAATAACNAATACC-ATAGACAC 657 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 TAGAACGAACAGCAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACAC 360 consensus_9321#1 AGGTGGAAATCAACAATGGAAAATCGAAACAAAGAACCAGATAGAATGTTACCAAGCAAT 717 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 AGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCA-GCTACAGTAGTAA 419 consensus_9321#1 GAAAATTGATAAACGTACAGGAAACATAAACAAAAAACAAAACAAATGAAGAGAAATGAG 777 consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 CAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTAC 479 consensus_9321#1 AAAAAAAGTAACACAGCAACAGCAAAACCATACAAGTAAATTACACGAAATCCCGTTCGA 837 consensus_9321#2 ---AGAAATGAGA--ACAAAAGCAAAACCATACAAGTAAATTAAACGTAATACCGTTCGA 55 consensus_9321#0 CCAGAAACAAACAAAACAAAAA-AGAATCAGAAAAGTGTATATTTTTATACTCCTTAT-- 536 ** * * *** * * ** ** * **** ** * ** * consensus_9321#1 TAATGAAGATAAAAAAA---ACACACAGAAAGGAGGATCGAACAACAATAGAGTAAGAAA 894 consensus_9321#2 TAATGAAAATTTAAAAACACACACACAGAAAAGAGGGTCGAACAACAATAGAGTAAGAAA 115 consensus_9321#0 --ACGAAGACGTGATTA--------TTGAAAGAGTAGACAAACA------GACGAACGAA 580 * *** * * * **** * **** ** ** ** consensus_9321#1 AGTAACAACGTACAACGCAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAAC 954 consensus_9321#2 AGTAACAACGTGGCACGGAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAAC 175 consensus_9321#0 AGAAAC--CATGAAAGGCAAAGAATAGAGAAGG-----AGCAAATACAAAGAAACAAAAC 633 ** *** * * * * ** * *** ** ******* * **** consensus_9321#1 AACGGTCATTATAACGACTACAACAAAATCGTAAACGGGAGTAAATCGAAAACAAAACAA 1014 consensus_9321#2 AACGGTCATTACAACGATTACAACAAAATCGTAA-CGGGAGTAAATCGAAAACAAAACAA 234 consensus_9321#0 AACAAATAACACAACAACAACAGTA-----GCAA-CCAAAATATCACACACCCCACACAC 687 *** * * *** * *** * * ** * * ** * * * * *** consensus_9321#1 ACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATA------TCT 1068 consensus_9321#2 ACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATGGTAATCT 294 consensus_9321#0 ACACTATCNNNCTCTAACACACAATT-ATATAATTTC-ACGTATAAATATG---TAATCT 742 ** * *********** ********** ********* ** *** consensus_9321#1 AGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTG 1128 consensus_9321#2 AGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTG 354 consensus_9321#0 AGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTG 802 ****************** ***************************************** consensus_9321#1 CTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCG 1188 consensus_9321#2 TTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCG 414 consensus_9321#0 TTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCG 862 ********************************* ************************* consensus_9321#1 TCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGA 1248 consensus_9321#2 TCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGA 474 consensus_9321#0 TCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGA 922 ************************************************************ consensus_9321#1 TGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGT 1308 consensus_9321#2 TGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGT 534 consensus_9321#0 TGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGT 982 ********************* *********************** ************** consensus_9321#1 ACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACA 1368 consensus_9321#2 ACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACA 594 consensus_9321#0 ACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACA 1042 ********************** ************************* *********** consensus_9321#1 GTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTT-AGGTTTAGCTCCCGGTTTATT 1427 consensus_9321#2 GTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGC------ 648 consensus_9321#0 GTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGC------ 1096 *********** ************* ** ******** ************** consensus_9321#1 GATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCA 1487 consensus_9321#2 -----------------------------------------------------AAAATCA 655 consensus_9321#0 -----------------------------------------------------AAAATCA 1103 ******* consensus_9321#1 ATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCC 1547 consensus_9321#2 ATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCC 715 consensus_9321#0 ATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCC 1163 ********** ************************************************* consensus_9321#1 ATTCGTCCCATTCGGGAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAATTA 1607 consensus_9321#2 A--------ACTCA--AAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATA 765 consensus_9321#0 A--------ACTCA--AAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATA 1213 * * ** ***************************************** ** consensus_9321#1 TGGGAAAA-TCCTGCAATTGTCCATTATCGGTTTCTTACTCACAGTGCAGCGGAGAATGT 1666 consensus_9321#2 TGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGT 825 consensus_9321#0 TGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGT 1273 *** **** ***** ******************** ********************* ** consensus_9321#1 ATTGAATTGATAAACTATGTTTTTTTTCTCTGTTTCTGTTTTGGTCTACTATCTTTGCTG 1726 consensus_9321#2 ATTGAATTGATAAACTATGTTTTTTT-CTCTGTTTCTGGTTTAGTCTACTTTCTTTGCTG 884 consensus_9321#0 ATTGAATTGATAAACTATGTTTTTTT-CTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTG 1332 ************************** *********** *** ******* ********* consensus_9321#1 CGTGACAGCGCTATGATTAATGAAAAC--------------------------------- 1753 consensus_9321#2 CGTGACAGCGCTATGATCAATGGAAACGCCTTTCGGGTGGGACATGAAAGC--------- 935 consensus_9321#0 CGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAA 1392 ***************** **** **** consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 ACACTCATGTCAAAGAAAATCGTTAACNAGATAATAGAAAACAGAAAAGCGTAAAACAGG 1452 consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 AGGAACACAATACAATACGACGAACAAAAAAAAAAAAACAAATGCGAATATGATTTCAAA 1512 consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 ACGAAAACAATAACAAACAAACAGAGATGCGCGCGTACAAATGAAAACCAGAAACTATAA 1572 consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 AATAAAACCAAGACAGTCGCACCTTTCTCCTTCACATCGTCCCATCCCGTCCCATTGCAC 1632 consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 CTCCACTCTAGGCTAGAAGATTTGCTCCGGATGCATTAGTAATCTCGAATTAGTGTCATG 1692 consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 TTGATTATAATCCATTTCGCGTGATGAAAGCCCCGAATGTTACATAAAAGATACCATCAA 1752 consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 GTGTACGGTGGGAGGCAGGAAATATTCACAACTCACAACTCACGAATAACAATCGGTTCA 1812 consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 ATGGTCAGTAAAAAAAAATCCCTTAACACTGCGTAAATCACAATGTAAGCCCCTTCCGAC 1872 consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 CCAACTAACCAGCAACACACACACACACACACACTTATATTAGCCGGCGACAGCGGTGTG 1932 consensus_9321#1 ------------------------------------------------------------ consensus_9321#2 ------------------------------------------------------------ consensus_9321#0 TATGAATGATGCAAGATGATGTTTTCTGATTTCAATAAAGTATAACTGAAGCGATCAATA 1992 consensus_9321#1 ----- consensus_9321#2 ----- consensus_9321#0 AATGT 1997 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||