These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9322#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2278 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCGAAGCGTGATGGCGAAAGTGCTGCTGCTAATCGGTACGCTGGCTTGGGTTGCTTCGATGCAGCGGTGCAGTGCGACGGATCATCTGCCGCCCGATCAACGCCAGCTAGGGGAGCTGTTTCCACTAACGATCATACACATGAACGATCTTCACGCGAGATTTGCAGAGACCTCGGAACGATCGTCCAAGTGTAAGGCGGC---GGAAGGTGACACCTGTATTGCGGGCATTGCACGCGTATTTCACACGGTGCAGGAGCTGAGAAAGCGCCACCGCAATGCACTGTTCTTCAACGTGGGTGACAACTTCCAGGGTACGATCTGGTACAACTATCACCGGTGGCGGGTGGTGGCACGATTCATCAAGCTGCTGCATCCAGATGCGATGACACTTGGCAATCATGAGTTCGATGATGGACTGAAGGGTTTGAGGCCGTACCTGAGCGCACTGGCAAAGAAAGACATTCAAACGGTAGCGACGAACCTGATCCGCTCTACAGATCCATTCCCAGCCTTGCCACGATCGGTTACTATCAAGCGAAAGGGACGATCGATTGGTATCATTGGTGTGATTGCGGACAAAACGCATGAACTTTCCAACACCGAAAGCATCACATTCTCCGACTCGGTGGCCGCGGTACGCGAAGAAGCAGCCGCCCTGAAGAAGCGGGACGTGAACATCATCCTCGTACTGTCGCACTGT-GGCCTGGAGGTGGACAAGCGTATCGCGCTGGAAGCGGGTGATGATGTGGACGTAATCATTGGTGGCCATTCGCACTCGTTTCTGTTTCCGAACGCGTCCAGCAAGCCTCACAACCAGCAAGACACCATCCTGGGCGACTATCCTGTGGTTGTGAGCAATGCGAATGGGCGAAAGATTCTAATTGTGCAAGCGTATGCCTACGGTAAGTATGTAGGCCGGTTGACGGCGTACTTCGATGCGCAAGG-CGAAGTGCAACACTGGGAAGGGTTCCCCGTCTATCTGTCCAACAGTGTGCCGCAAAGTCGGGTGGCACTGCGCATTCTTGCACCGTACCGCAGACAGGTGGAAGCTTACGGTGCAACCAAGATTGCCCAAACTACGGTCGATCTGGTGCAGGCAACCTGTCGGCTGGGCGAGTGTAGTCTGGGATGTTTGGTGGCGGATGCCATTGCCGATTACTACACC-AACCATACCTTCCATCCGGTAGCGATCATCAATGCGGGAAACTTCCGATCTCCAATACCGAAAGGCGACATCACGAATGAAGAAGCGATCGGTGCGAGCCCGTTCTCGAACACGGTCGATCTGCTGACGCTCCGCGGTGACGCACTGTGGCAGCTCGTCGAGCACTCGCTCGTGTGGGACAGCGTGAAGCGGCTGAACGTGGCCCAGGTGGCGGGACTGCGCGTGGTGGCCGATCTCGATCGTGCGCCGTACGGCCGGGTACTGTCGATCGATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTAAGGTGTAAGGAAATTTACCCCCAGAAAGCTTTTGGATTTGAAAGTGAAAGAATCATTTATAAAATGTAAAAAATCACATAAAAAGCAGACTAAGGCTTAGCAGTTACCAGCGAGAGTATTTCTTCCAGCTAAAAAGCTGTGCAAGCGTCGTGGATTACATCATGCACGTGAACACACACAGCTGTATAAACAGCAAATAAATATGCCGCATTGTTTGAGTGGAGCGTTTGAATAGAAGCTTGCGGGTTTGCTGCTAGCTCGGTATCGCCGATTAAATCAACATTTGTTCAGTAAATTGCTGATCGCGCTGTGGGAAAGATGATTGAGAATCGAACATCATCTTTGACTAGCTTCTCTTTATGTTAGACCGATGAATCGCTTTGATTAACTTTTTCATACAGAATGTGGACAGTTTTTTAAATGTCAAATGATATTTAATATTCAAATTTAAGTTAAATTAGAGGGAAATTGTTTTATCTATTTCATTCCTTTCCAGAAGAAAAGATTAAAAATTATTAATTAAAATCTTAAACCACAATAAAAGCAGTCAATCCTGCCCAAATGCT] [+] EMBL BM608991 [CCGCCCACGCGTCCGCCCACGCGTCCGAGCGTGATGGCGAAAGTGCTGCTGCTAATCGGTACGCTGGCTTGGGTTGCTTCGATGCAGCGGTGCAGTGCGACGGATCATCTGCCGCCCGATCAACGCCAGCTAGCGGAGCTGTTTCCACTAACGATCATACACATGAACGATCTTCACGCGAGATTTGCAGAAACCTCGGAACGATCGTCCAAGTGTAAGGCGGCGGAGGAAGGTGACACCTGCATTGCGGGCATTGCGCGCGTATTTCACACGGTGCAGGAGCTGAGAAAGCGCCACCGCAATGCACTGTTCTTCAACGTGGGTGACAACTTCCAGGGTACGATCTGGTACAACTATCACCGGTGGCGGGTGGTGGCACGATTCATCAAGCTGCTGCATCCAGATGCGATGACACTTGGCAATCATGAGTTCGATGATGGACTGAAGGGTTTGAGGCCGTACCTGAGCGCACTGGCAAAGAAAGACATTCAAACGGTAGCGACGAACCTGATCCGCTCTACAGATCCATTTCCAGCCTTGCCACGATCGGTTACTATCAAGCGAAAGGGACGATCGATTGGTATCATTGGTGTGATTGCGGACAAAACGCATGAACTTTCCAACACCGAAAGCATCACATTCTCCGACTCGGTGGCCGCGGTACGCGAAGAAGCAGCCG ] [+] EMBL AGA237704 [ GAAGCGTGATGGCGAAAGTGCTGCTGCTAATCGGTACGCTGGCTTGGGTTGCTTCGATGCAGCGGTGCAGTGCGACGGATCATCTGCCGCCCGATCAACGCCAGCTAGGGGAGCTGTTTCCACTAACGATCATACACATGAACGATCTTCACGCGAGATTTGCAGAGACCTCGGAACGATCGTCCAAGTGTAAGGCGGC GGAAGGTGACACCTGTATTGCGGGCATTGCACGCGTATTTCACACGGTGCAGGAACTGAGAAAGCGCCACCGCAATGCACTGTTCTTCAATGTGGGTGACAACTTCCAGGGTACGATCTGGTACAACTATCACCGGTGGCGGGTGGTGGCACGATTCATCAAGCTGCTGCATCCAGATGCGATGACACTTGGCAATCATGAGTTCGATGATGGACTGAAGGGTTTAAGGCCGTACCTGAGCGCACTGGCAAAGAAAGACATTCAAACGGTAGCGACGAACCTGATCCGCTCTACAGATCCATTCCCAGCCTTGCCACGATCGGTTACTATCAAGCGAAAGGGACGATCGATTGGTATCATTGGTGTGATTGCGGACAAAACGCATGAACTTTCCAACACCGAAAGCATCACATTCTCCGACTCGGTGGCCGCGGTACGCGAAGAAGCAGCCGCCCTGAAGAAGCGGGACGTGAACATCATCCTCGTACTGTCGCACTGT GGCCTGGAGGTGGACAAGCGTATCGCGCTGGAAGCGGGTGATGATGTGGACGTAATCATTGGTGGCCATTCGCACTCGTTTCTGTTTCCGAACGCGTCCAGCAAGCCTCACAACCAGCAAGACACCATCCTGGGCGACTATCCTGTGGTTGTGAGCAATGCGAATGGGCGAAAGATTCTAATTGTGCAAGCGTATGCCTACGGTAAGTATGTAGGCCGGTTGACGGCGTACTTCGATGCGCAAGG CGAAGTGCAACACTGGGAAGGGTTCCCCGTCTATCTGTCCAACAGTGTGCCGCAAAGTCGGGTGGCACTGCGCATTCTTGCACCGTACCGCAGACAGGTGGAAGCTTACGGTGCAACCAAGATTGCCCAAACTACGGTCGATCTGGTGCAGGCAACCTGTCGGCTGGGCGAGTGTAGTCTGGGATGTTTGGTGGCGGATGCCATTGCCGATTACTACACC AACCATACCTTCCATCCGGTAGCGATCATCAATGCGGGAAACTTCCGATCTCCAATACCGAAAGGCGACATCACGAATGAAGAAGCGATCGGTGCGAGCCCGTTCTCGAACACGGTCGATCTGCTGACGCTCCGCGGTGACGCACTGTGGCAGCTCGTCGAGCACTCGCTCGTGTGGGACAGCGTGAAGCGGCTGAACGTGGCCCAGGTGGCGGGACTGCGCGTGGTGGCCGATCTCGATCGTGCGCCGTACGGCCGGGTACTGTCGATCGATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTAAGGTGTAAGGAAATTTACCCCCAGAAAGCTTTTGGATTTGAAAGTGAAAGAATCATTTATAAAATGTAAAAAATCACATAAAAAGCAGACTAAGGCTTAGCAGTTACCAGCGAGAGTATTTCTTCCAGCTAAAAAGCTGTGCAAGCGTCGTGGATTACATCATGCACGTGAACACACACAGCTGTATAAACAGCAAATAAATATGCCGCATTGTTTGAGTGGAGCGTTTGAATAGAAGCTTGCGGGTTTGCTGCTAGCTCGGTATCGCCGATTAAATCAACATTTGTTCAGTAAATTGCTGATCGCGCTGTGGGAAAGATGATTGAGAATCGAACATCATCTTTGACTAGCTTCTCTTTATGTTAGACCGATGAATCGCTTTGATTAACTTTTTCATACAGAATGTGGACAGTTTTTTAAATGTCAAATGATATTTAATATTCAAATTTAAGTTAAATTAGAGGGAAATTGTTTTATCTATTTCATTCCTTTCCAGAAGAAAAGATTAAAAATTATTAATTAAAATCTTAAACCACAATAAAAGCAGTCAATCCTGCCCAAATGCT] [+] EMBL AGA17701 [ GAAGCGTGATGGCGAAAGTGCTGCTGCTAATCGGTACGCTGGCTTGGGTTGCTTCGATGCAGCGGTGCAGTGCGACGGATCATCTGCCGCCCGATCAACGCCAGCTAGGGGAGCTGTTTCCACTAACGATCATACACATGAACGATCTTCACGCGAGATTTGCAGAGACCTCGGAACGATCGTCCAAGTGTAAGGCGGC GGAAGGTGACACCTGTATTGCGGGCATTGCACGCGTATTTCACA ] [+] EMBL CNS08VS1 [ AGTGCTGCTGCTAATCGGTACGCTGGCTTGGGTTGCTTCGATGCAGCGGTGCAGTGCGACGGATCATCTGCCGCCCGATCAACGCCAGCTAGGGGAGCTGTTTCCACTAACGATCATACACATGAACGATCTTCACGCGAGATTTGCAGAGACCTCGGAACGATCGTCCAAGTGTAAGGCGGC GGAAGGTGACACCTGTATTGCGGGCATTGCACGCGTATTTCACACGGTGCAGGAACTGAGAAAGCGCCACCGCAATGCACTGTTCTTCAATGTGGGTGACAACTTCCAGGGTACGATCTGGTACAACTATCACCGGTGGCGGGTGGTGGCACGATTCATCAAGCTGCTGCATCCAGATGCGATGACACTTGGCAATCATGAGTTCGATGATGGACTGAAGGGTTTAAGGCCGTACCTGAGCGCACTGGCAAAGAAAGACATTCAAACGGTAGCGACGAACCTGATCCGCTCTACAGATCCATTCCCAGCCTTGCCACGATCGGTTACTATCAAGCGAAAGGGACGATCGATTGGTATCATTGGTGTGATTGCGGACAAAACGCATGAACTTTCCAACACCGAAAGCATCACATTCTCCGACTCGGTGGCCGCGGTACG AAAGAAGCAGCCGCCCTGAAGAAGCGGGACGTGAACATCATCCTCGTACTGTCGCACTGT GGCCTGGAGGTGGACAAGCGTATCGCGCTGGAAGCGGGTGATGATGTGGACGTAATCATTGGTGGCCATTCGCACTCGTTTCTGTTTCCGAACGCGTCCAGCAAGCCTCACAACCAGCAAGACACCATCCTGGGCGACTATCCTGTGGTTGTGAGCAATGCGAATGGGCGAAAGATTCTAATTGTGCAAGCGTATGCCTACGGTAAGTATGTA ] [+] EMBL BX621818 [ CTGGCTTGGGTTGCTTCGATGCAGCGGTGCAGTGCGACGGATCATCTGCCGCCCGATCAACGCCAGCTAGCGGAGCTGTTTCCACTAACGATCATACACATGAACGATCTTCACGCGAGATTTGCAGAAACCTCGGAACGATCGTCCAAGTGTAAGGCGGCGGAGGAAGGTGACACCTGCATTGCGGGCATTGCGCGCGTATTTCACACGGTGCAGGAGCTGAGAAAGCGCCACCGCAATGCACTGTTCTTCAACGTGGGTGACAACTTCCAGGGTACGATCTGGTACAACTATCACCGGTGGCGGGTGGTGGCACGATTCATCAAGCTGCTGCATCCAGATGCGATGACACTTGGCAATCATGAGTTCGATGATGGACTGAAGGGTTTGAGGCCGTACCTGAGCGCACTGGCAAAGAAAGACATTCAAACGGTAGCGACGAACCTGATCCGCTCTACAGATCCATTTCCAGCCTTGCCACGATCGGTTACTATCAAGCGAAAGGGACGATCGATTGGTATCATTGGTGTGATTGCGGACAAAACGCATGAACTTTCCAACACCGAAAGCATCACATTCTCCGACTCGGTGGCCGCGGTACGCGAAGAAGCAGCCGCCCTGAAGAAGCGGGACGTGAACATCATCCTCGTACTGTCACACTGTGGGCCTGGAGGTGGACAAGCGTATCGCGCTGGAAGCGGGTGACGATGTGGACGTAATCATTGGTGGNCATTCGCATTCGTTTCTGTTTCCGAACGCGTCCAGCAAGCCTCACAACCAGCAAGACACCATCCTGGGCGACTATCCTGTGGNTGTGAGCAATGCGAATGGGCGAAAGATTCTAATTGTGCAAGC ] [+] EMBL BM598947 [ cgaCCCACGCGT CCGCGATCGGTTACTATCAAGCGAAAGGGACGATCGATTGGTATCATTGGTGTGATTGCGGACAAAACGCATGAACTTTCCAACACCGAAAGCATCACGTTCTCCGACTCGGTGGCAGCGGTACGCGAAGAAGCAGCCGCCCTGAAGAAGCGGGACGTAAACATCATCCTCGTACTGTCGCACTGT GGCCTGGAGGTGGACAAGCGTATCGCGCTGGAAGCGGGTGATGATGTGGACGTAATCATTGGTGGCCATTCGCATTCGTTTCTGTTTCCGAACGCGTCCAGCAAGCCTCACAACCAGCAAGACACCATCCTGGGCGACTATCCTGTGGTTGTGAGCAATGCGAATGGGCGAAAGATTCTAATTGTGCAAGCGTATGCCTACGGTAAGTATGTAGGCCGGTTGACGACGTACTTCGATGCGCAAGGCCGAAGTGCAACACTGGGAAGGGTT ] [-] EMBL CNS08VS2 [ AGTCGGGTGGCACTGCGCATTCTTGCACCGTACCGCAGACAGGTGGAAGCTTACGGTGCAACCAAGATTGCCCAAACTACGGTCGATCTGGTGCAGGCAACCTGTCGGCTGGGCGAGTGTAGTCTGGGATGTTTGGTGGCGGATGCCATTGCCGATTACTACACCAAACCATACCTTCCATCCGGTAGCGATCATCAATGCGGGAAACTTCCGATCTCCAATACCGAAAGGCGACATCACGAATGAAGAAGCGATCGGTGCGAGCCCGTTCTCGAAAACGGTCGATCTGCTGAACCTCCGCGGTAACGCACTGTGGCAGCTCGTCGAGAACTCGCTCGTGTGGGACAGCGTGAAGCGGCTGAACGTGGCCCAGGTGGCGGGACTGCGCGTGGTGGCCGATCTCGATCGTGCGCCGTACGGCCGGGAACTGTCGATCGATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGAATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTAAGGTGTAAGGAAATTTACCCCCAGAAAGCTTTTGGATTTGAAAGTGAAAGAATCATTTATAAAATGTAAAAAATCACATAAAAAGCAGACTAAGGCTTAGCAGTTACCAGCGAGAGTATTTCTTCCAGCTAAAAAGCTGTGCAAGCGTCGTGGATTACATCATGCACGTGTACACACACAGCTGTATAAAC ] consensusID : consensus_9322#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 800 fasta sequence [TCTGGCTGGGCGAGTGTAGTACTAGGGATGTTTGGTGGCGGATGCCATTGCCGATTACTACACCAACCATACCTTCCATCCGGTAGCGATCATCAATGCGGGAAACTTCCGATCTCCAATACCGAAAGGCGACATCACGAATGAAGAAGCGATCGGTGCGAGCCCGTTCTCGAACACGGTCGATCTGCTGACGCTCCGCGGTGACGCACTGTGGCAGCTCGTCGAGCACTCGCTCGTGTGGGACAGCGTGAAGCGGCTGAACGTGGCCCAGGTGGCGGGACTGCGCGTGGTGGCCGATCTCGATCGTGCGCCGTATGGCCGGGTACTGTCGATCGATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTTTGGGTTTTAATGAAAGAATCATTTATAAAATGTAAAAAATCACATAAAAAGCAGACTAAGGCTTAGCAGTTACCAGCGAGAGTATTTCTTCCAGCTAAAAAGCTGTGCAAGCGTCGTGGATTACATCATACACGTGAACACATACAGCTGTATAAATAGCAAATAAATATGCCGCATTGTTTGAGTGGAGCGCTTGAATAGCAAAAAAAAAA] [+] EMBL BX624214 [TCTGGCTGGGCGAGTGTAGTACTAGGGATGTTTGGTGGCGGATGCCATTGCCGATTACTACACCAACCATACCTTCCATCCGGTAGCGATCATCAATGCGGGAAACTTCCGATCTCCAATACCGAAAGGCGACATCACGAATGAAGAAGCGATCGGTGCGAGCCCGTTCTCGAACACGGTCGATCTGCTGACGCTCCGCGGTGACGCACTGTGGCAGCTCGTCGAGCACTCGCTCGTGTGGGACAGCGTGAAGCGGCTGAACGTGGCCCAGGTGGCGGGACTGCGCGTGGTGGCCGATCTCGATCGTGCGCCGTATGGCCGGGTACTGTCGATCGATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATNGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCCATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGT AAANCGTAGCAG TTGGGGTTTAATGAANGAATCATTTA ] [+] EMBL CF541839 [ GATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTTTGGGTTTTAATGAAAGAATCATTTATAAAATGTAAAAAATCACATAAAAAGCAGACTAAGGCTTAGCAGTTACCAGCGAGAGTATTTCTTCCAGCTAAAAAGCTGTGCAAGCGTCGTGGATTACATCATACACGTGAACACATACAGCTGTATAAATAGCAAATAAATATGCCGCATTGTTTGAGTGGAGCGCTTGAATAGCAAAAAAAAAA] [+] EMBL CF542042 [ GATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGGCGATGTCGTTCATTGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTTTGGGTTTTAATGAAAGAATCATTTATAAAATGTAAAAAATCACATAAAAAGCAGACTAAGGCTTAGCAGTTACCAGCGAGAGTATTTCTTCCAGCTAAAAAGCTGTGCAAGCGTCGTGGATTACATCATGCACGTGAACACATACAGCTGTATAAATAGCAAATAAATATGCCGCGTTGTTTGAGTGGAGCGTTTAAAAA AAAAA ] consensusID : consensus_9322#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 444 fasta sequence [GATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTTTGGGTTTTAATGAAAGAATCATTTATAAAATGTAAAAAATCACATAAAAAGCAGACTAAGGCTTA-GCAGTT-ACCAGCGAGAGTATTTCTT--CCA-GCTAAAAAGCTGTGCAAGCGTCGTGGATTACATCATGCACGTGAACACATACAGCTGTATAAATAGCAAATAAATATGCCGCATTACAAAAAAAAAA] [+] EMBL CF541955 [GATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTTTGGGTTTTAATGAAAGAATCATTTATAAAATGTAAAAAATCACATAAAAAGCAGACTAAGGCTTA GCAGTT ACCAGCGAGAGTATTTCTT CCA GCTAAAAAGCTGTGCAAGCGTCGTGGATTACATCATGCACGTGAACACATACAGCTGTATAAATAGCAAATAAATATGCCGCATTACAAAAAAAAAA] [+] EMBL CF541803 [GATGTGCGC ACCTGAACGATGATGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATCCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTTTGGGTTTTAATGAAAGAATCATTTATAAAATGTAAAAAATCACATAAAAAGCAGACTAAGGCTTANNCAGTTAACCAGCGAGAGTATTTCTTTCCCANCCTAAAAAGCTGTGCAnccgnngga ] [+] EMBL CF541923 [GATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTTTGGGTTTTAATGAAAGAATCATTTATAAAA AAAAAA ] consensusID : consensus_9322#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 368 fasta sequence [GATGTGCGCAACCCGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATCCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTTTGGGTTTTAATGAAAGAATCATTTATAAAATGTAAAAAATTCACGTAAAAAGCNAGACCTAAGGNGCTANACACGATGTACCCCNCGACGAAGTAGTTTATTTTTCCTNTNCCCA] [+] EMBL CF541773 [GATGTGCGCAACCCGAACGATGGTGTAAGCTACGAACCGTTGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATGGATCCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGTTCATCCAGTATCTGAAGAAGCTGAAGGTGGTGAACGAAAGCAATCTCGTCGGGGAAGAATGATACTGAACGGTACGGTAAAATCGTAGCAGTTTGGGTTTTAATGAAAGAATCATTTATAAAATGTAAAAAATTCACGTAAAAAGCNAGACCTAAGGNGCTANACACGATGTACCCCNCGACGAAGTAGTTTATTTTTCCTNTNCCCA] consensusID : consensus_9322#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 175 fasta sequence [AGCAAGAATCGCCANGAGGTNATAATCTAATTGTGCAGCGTATCCCTACGGTAAGTATGTAGGCCGGTTGACGGCGTACTTCGATGCGCAAGGCGAAGTGCAACACTGGGAAGGGTTCCCCGTCTATCTGTCCAACAGTGTGCCGCAAAGTCCGGTGGCACTGCGCATTCTTGCA] [+] EMBL BX466153 [AGCAAGAATCGCCANGAGGTNATAATCTAATTGTGCAGCGTATCCCTACGGTAAGTATGTAGGCCGGTTGACGGCGTACTTCGATGCGCAAGGCGAAGTGCAACACTGGGAAGGGTTCCCCGTCTATCTGTCCAACAGTGTGCCGCAAAGTCCGGTGGCACTGCGCATTCTTGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 CCGCCCACGCGTCCGCCCACGCGTCGAAGCGTGATGGCGAAAGTGCTGCTGCTAATCGGT 60 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 ACGCTGGCTTGGGTTGCTTCGATGCAGCGGTGCAGTGCGACGGATCATCTGCCGCCCGAT 120 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 CAACGCCAGCTAGGGGAGCTGTTTCCACTAACGATCATACACATGAACGATCTTCACGCG 180 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 AGATTTGCAGAGACCTCGGAACGATCGTCCAAGTGTAAGGCGGCGGAAGGTGACACCTGT 240 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 ATTGCGGGCATTGCACGCGTATTTCACACGGTGCAGGAGCTGAGAAAGCGCCACCGCAAT 300 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 GCACTGTTCTTCAACGTGGGTGACAACTTCCAGGGTACGATCTGGTACAACTATCACCGG 360 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 TGGCGGGTGGTGGCACGATTCATCAAGCTGCTGCATCCAGATGCGATGACACTTGGCAAT 420 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 CATGAGTTCGATGATGGACTGAAGGGTTTGAGGCCGTACCTGAGCGCACTGGCAAAGAAA 480 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 GACATTCAAACGGTAGCGACGAACCTGATCCGCTCTACAGATCCATTCCCAGCCTTGCCA 540 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 CGATCGGTTACTATCAAGCGAAAGGGACGATCGATTGGTATCATTGGTGTGATTGCGGAC 600 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 AAAACGCATGAACTTTCCAACACCGAAAGCATCACATTCTCCGACTCGGTGGCCGCGGTA 660 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 CGCGAAGAAGCAGCCGCCCTGAAGAAGCGGGACGTGAACATCATCCTCGTACTGTCGCAC 720 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 TGTGGCCTGGAGGTGGACAAGCGTATCGCGCTGGAAGCGGGTGATGATGTGGACGTAATC 780 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 ATTGGTGGCCATTCGCACTCGTTTCTGTTTCCGAACGCGTCCAGCAAGCCTCACAACCAG 840 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 CAAGACACCATCCTGGGCGACTATCCTGTGGTTGTGAGCAATGCGAATGGGCGAAAGATT 900 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 CTAATTGTGCAAGCGTATGCCTACGGTAAGTATGTAGGCCGGTTGACGGCGTACTTCGAT 960 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 GCGCAAGGCGAAGTGCAACACTGGGAAGGGTTCCCCGTCTATCTGTCCAACAGTGTGCCG 1020 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 CAAAGTCGGGTGGCACTGCGCATTCTTGCACCGTACCGCAGACAGGTGGAAGCTTACGGT 1080 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ----------------------------------------------TCTGGCTGGGCGAG 14 consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 GCAACCAAGATTGCCCAAACTACGGTCGATCTGGTGCAGGCAACCTGTCGGCTGGGCGAG 1140 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 TGTAGTACTAGGGATGTTTGGTGGCGGATGCCATTGCCGATTACTACACCAACCATACCT 74 consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 TGTAGTCT--GGGATGTTTGGTGGCGGATGCCATTGCCGATTACTACACCAACCATACCT 1198 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 TCCATCCGGTAGCGATCATCAATGCGGGAAACTTCCGATCTCCAATACCGAAAGGCGACA 134 consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 TCCATCCGGTAGCGATCATCAATGCGGGAAACTTCCGATCTCCAATACCGAAAGGCGACA 1258 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 TCACGAATGAAGAAGCGATCGGTGCGAGCCCGTTCTCGAACACGGTCGATCTGCTGACGC 194 consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 TCACGAATGAAGAAGCGATCGGTGCGAGCCCGTTCTCGAACACGGTCGATCTGCTGACGC 1318 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 TCCGCGGTGACGCACTGTGGCAGCTCGTCGAGCACTCGCTCGTGTGGGACAGCGTGAAGC 254 consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 TCCGCGGTGACGCACTGTGGCAGCTCGTCGAGCACTCGCTCGTGTGGGACAGCGTGAAGC 1378 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 GGCTGAACGTGGCCCAGGTGGCGGGACTGCGCGTGGTGGCCGATCTCGATCGTGCGCCGT 314 consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 GGCTGAACGTGGCCCAGGTGGCGGGACTGCGCGTGGTGGCCGATCTCGATCGTGCGCCGT 1438 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ATGGCCGGGTACTGTCGATCGATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGT 374 consensus_9322#2 --------------------GATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGT 40 consensus_9322#3 --------------------GATGTGCGCAACCCGAACGATGGTGTAAGCTACGAACCGT 40 consensus_9322#0 ACGGCCGGGTACTGTCGATCGATGTGCGCAACCTGAACGATGGTGTAAGCTACGAACCGT 1498 consensus_9322#4 ------------------------------------------------------AGCAA- 5 * * consensus_9322#1 TGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATG 434 consensus_9322#2 TGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATG 100 consensus_9322#3 TGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATG 100 consensus_9322#0 TGAATCGCACCGCAAACTATCGGGTGGTGACGATGTCGTTCATTGCCACCGGTAAGGATG 1558 consensus_9322#4 -GAATCGC----CANGAGGTNATAATCTAATTGTGCAGCGTATCCCTAC-GGTAAGTATG 59 ******* ** * * * ** * ** * ** ****** *** consensus_9322#1 GATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGT 494 consensus_9322#2 GATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGT 160 consensus_9322#3 GATCCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGT 160 consensus_9322#0 GATTCCGGTGGGCGTTGGAGCGATCGGAGCGGCAGATCGGTCCGCTCGATTCCGATACGT 1618 consensus_9322#4 TAGGCCGGTTGACGGCGTACT--TCGATGCG-CAAGGCGAAGTGCAACACTGGGAAGGGT 116 * ***** * ** * * *** *** ** ** ** * * ** ** consensus_9322#1 TCATCCAGTATCTGA--AGAAGCTGAAGGTGGTGAACGAAAGCAAT-CTCGTCGGGGGAA 551 consensus_9322#2 TCATCCAGTATCTGA--AGAAGCTGAAGGTGGTGAACGAAAGCAAT-CTCGTCGGGGGAA 217 consensus_9322#3 TCATCCAGTATCTGA--AGAAGCTGAAGGTGGTGAACGAAAGCAAT-CTCGTCGGGG-AA 216 consensus_9322#0 TCATCCAGTATCTGA--AGAAGCTGAAGGTGGTGAACGAAAGCAAT-CTCGTCGGGGGAA 1675 consensus_9322#4 TCCCCGTCTATCTGTCCAACAGTGTGCCGCAAAGTCCGGTGGCACTGCGCATTCTTGCA- 175 ** * ****** * ** * * ** *** * * * * * * consensus_9322#1 GAATGATACTGAACGGTACGGTAAAATCGTAGCAGT------------------------ 587 consensus_9322#2 GAATGATACTGAACGGTACGGTAAAATCGTAGCAGT------------------------ 253 consensus_9322#3 GAATGATACTGAACGGTACGGTAAAATCGTAGCAGT------------------------ 252 consensus_9322#0 GAATGATACTGAACGGTACGGTAAAATCGTAGCAGTAAGGTGTAAGGAAATTTACCCCCA 1735 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 --------TTGGGTTTTAA--TGAAAGAATCATTTATAAAATGTAAAAAAT-CACATAAA 636 consensus_9322#2 --------TTGGGTTTTAA--TGAAAGAATCATTTATAAAATGTAAAAAAT-CACATAAA 302 consensus_9322#3 --------TTGGGTTTTAA--TGAAAGAATCATTTATAAAATGTAAAAAATTCACGTAAA 302 consensus_9322#0 GAAAGCTTTTGGATTTGAAAGTGAAAGAATCATTTATAAAATGTAAAAAAT-CACATAAA 1794 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 AAGCAGACTAAGGCTTAGCAGTTACCAGCGAGAGTATTTCTTCCAGCTAAAAAGCTGTGC 696 consensus_9322#2 AAGCAGACTAAGGCTTAGCAGTTACCAGCGAGAGTATTTCTTCCAGCTAAAAAGCTGTGC 362 consensus_9322#3 AAGCN-----AGACCTA--AGGNGCTANACACGATGTACCCCNCGAC---GAAGTAGTTT 352 consensus_9322#0 AAGCAGACTAAGGCTTAGCAGTTACCAGCGAGAGTATTTCTTCCAGCTAAAAAGCTGTGC 1854 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 AAGCGTCGTGGATTACATCATACACGTGAACACATACAGCTGTATAAATAGCAAATAAAT 756 consensus_9322#2 AAGCGTCGTGGATTACATCATGCACGTGAACACATACAGCTGTATAAATAGCAAATAAAT 422 consensus_9322#3 ATTTTTCCTNTNCC-CA------------------------------------------- 368 consensus_9322#0 AAGCGTCGTGGATTACATCATGCACGTGAACACACACAGCTGTATAAACAGCAAATAAAT 1914 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ATGCCGCATTGTTTGAGTGGAGCGCTTGAATAGCAAAAAAAAAA---------------- 800 consensus_9322#2 ATGCCGCATTACAAAAAAAAAA-------------------------------------- 444 consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 ATGCCGCATTGTTTGAGTGGAGCGTTTGAATAGAAGCTTGCGGGTTTGCTGCTAGCTCGG 1974 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 TATCGCCGATTAAATCAACATTTGTTCAGTAAATTGCTGATCGCGCTGTGGGAAAGATGA 2034 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 TTGAGAATCGAACATCATCTTTGACTAGCTTCTCTTTATGTTAGACCGATGAATCGCTTT 2094 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 GATTAACTTTTTCATACAGAATGTGGACAGTTTTTTAAATGTCAAATGATATTTAATATT 2154 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 CAAATTTAAGTTAAATTAGAGGGAAATTGTTTTATCTATTTCATTCCTTTCCAGAAGAAA 2214 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ------------------------------------------------------------ consensus_9322#2 ------------------------------------------------------------ consensus_9322#3 ------------------------------------------------------------ consensus_9322#0 AGATTAAAAATTATTAATTAAAATCTTAAACCACAATAAAAGCAGTCAATCCTGCCCAAA 2274 consensus_9322#4 ------------------------------------------------------------ consensus_9322#1 ---- consensus_9322#2 ---- consensus_9322#3 ---- consensus_9322#0 TGCT 2278 consensus_9322#4 ---- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||