These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9324#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1124 fasta sequence [CCGCCCACGCGTCCGGTTACTGACAAACGTCAAACGCTGTTTACGGTTCGTTTTT-CCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT-GGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTG-AAAATTGGACGTAGAGCAGT-GGGAAGCACC-GGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC-TTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTCTAT-CGAATCTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCC-TCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAA--CCAGAT----AAGGTCATCG-CTGTT-----G--AAATATACCACACGTGTAACAGTAAAAAAA---AAAAAAAAATCAGACGCTNACCTCGGGGG] [+] EMBL BM639378 [CCGCCCACGCGTCCGGTTACTGACAAACGTCAAACGCTGTTTACGGTTCGTTTTTCCCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACATTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTTGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGGCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAAATTGGACGTAGAGCAGTGGGGAAGCACC GGTGGGAAAACAAATCCAGCGAACATCGGCTGCT ] [+] EMBL CNS096WH [ ggGTTTACGCTTCGTTTTT CCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGCGGCCTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGC ] [+] EMBL CNS09EWC [ CCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTCGGTGTGTTACTGCGAA CGTTATGGCTAGCTG AAAATTGGACGTAGAGCAGT GGGAAGCACC GGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC TTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTAT CGAAACTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCC TCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCT ] [+] EMBL BX603292 [ AGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTTGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTG AAAATTGGACGTAGAGCAGT GGGAAGCACC GGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC TTCAATCCATCTCTTCGTACATTCCATCCGCAAGT ] [+] EMBL BM609540 [ ccgCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACATTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTTGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTG AAAATTGGACGTAGAGCAGT GGGAAGCACCGGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC TTCAATCCATCTCTTCGTACATT ] [+] EMBL BX621586 [ GTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCAACAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTTGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTG AAAATTGGACGTAGAGCAGT GGGAAGCACC GGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC TTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTCTAT CGAATCTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTNCC TCCCCAAACGATAGACAGACGCNAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCT ] [+] EMBL BX628085 [ CCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTTGGCGACCGCTGCGACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTCGGTGTGTTACTGCGAAGCGTTATG ] [+] EMBL BX609822 [ ATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCTTGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTTGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTC ] [-] EMBL AL692192 [ TGCTAGCACCGTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTCTATGCGAATCTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCGTCCCC AACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCCCAGATTAAAAAGGTCATCGCCTGTTTTTGGGAAAAATATACCACACGTGTAACAGTAAAAAAAGGGAAAAAAAAATCAGACGCTNACCTCGGGGG] consensusID : consensus_9324#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 894 fasta sequence [CTGTTGGCCTACTGGACGGTTCGTTTTTCCCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGAACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCAAACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCAAGAAGGAGTTCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATAAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCAAACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGGCGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAACACGTGTAACATTGTAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCGGGT] [-] EMBL CNS09PYN [CTGTTGGCCTACTGGACGGTTCGTTTTTCCCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGAACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCAAACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCAAGAAGGAGTTCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGAACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATAAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCAAACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGGCGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAACACGTGTAAC ] [+] EMBL CNS09PYM [ GTTTTTCCCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAA CGTTATGGCTAGCTGAAAATTGGGCGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAACACGTGTAACATTGTAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCGGGT] [-] EMBL CNS09EWD [ ggcGCCAAGAAGGAGTTCTGCCAGCGCATCCGCACCAAGAACATGCCGTACTGTACGCACTTTTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATAAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCAAACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTTTTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAAAAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTTTTTTTCTATGTATACAAATTCTTCTTGCCCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAA ] [-] EMBL CNS096WI [ TTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAACACGTGTAACA GTAAAAAAAAAAAAA ] consensusID : consensus_9324#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 770 fasta sequence [GAATCCCCCGAGGTTATTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGATTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAGAAGC] [+] EMBL AL932156 [GAATCCCCCGAGGTTATTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGATTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAGAAGC] [+] EMBL BM577443 [ TCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCAAACCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCG ] consensusID : consensus_9324#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence [CCGCCCACGCGTCCGCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACATTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTTGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAA] [+] EMBL BM603315 [CCGCCCACGCGTCCGCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACATTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTTGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9324#2 ------------------------------------------------------------ consensus_9324#3 ------------------------------------------------------------ consensus_9324#0 CCGCCCACGCGTCCGGTTACTGACAAACGTCAAACGCTGTTTACGGTTCGTTTTTCCCCT 60 consensus_9324#1 ------------------------------------------------------------ consensus_9324#2 -----------GAATCCCCCGAGGTTA-TTTTGCGGGTTTCGGGTGTACGCGCTTTTCCA 48 consensus_9324#3 ------------CCGCCCACGCGTCCGCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCA 48 consensus_9324#0 CGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCA 120 consensus_9324#1 ------------------------------------------------------------ consensus_9324#2 CCCTGCACACAGAATCTCATCCCAGTTTTCCAAATCCTCCCGATATTTCCCCACACTGCC 108 consensus_9324#3 CCCTGCACACAGAATCTCATCCCAGTTTTCCAA-TCCTCCCGATATTTCCCCACATTGCC 107 consensus_9324#0 CCCTGCACACAGAATCTCATCCCAGTTTTCCAA-TCCTCCCGATATTTCCCCACACTGCC 179 consensus_9324#1 ------------------------------------------------------------ consensus_9324#2 ACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAG 168 consensus_9324#3 ACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAG 167 consensus_9324#0 ACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAG 239 consensus_9324#1 ------------------------------------------CTGTTGGCCTACTGGACG 18 *** ***** ** * consensus_9324#2 CTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAG 228 consensus_9324#3 CTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAG 227 consensus_9324#0 CTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAG 299 consensus_9324#1 GT-TCGTTTTT--CCCCCTCGTAGCCCATTTACGTTGTTTT----TGTGCCTTTTGCGGG 71 * * * ** * * * ** ** * *** ****** * ** * consensus_9324#2 TGTTACGTCTGCTCGAACCAG-ACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGAT 287 consensus_9324#3 TGTTACGTCTGCTCGAACCAG-ACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGAT 286 consensus_9324#0 TGTTACGTCTGCTCGAACCAG-ACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGAT 358 consensus_9324#1 TTTCGGGTGTACGCGCTTTTCCACCCTGAACACAGAA-----TCTCATCCCAGT-----T 121 * * ** * * ** *** ***** ** ***** * * ** * consensus_9324#2 CTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTT 347 consensus_9324#3 CTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTT 346 consensus_9324#0 CTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTT 418 consensus_9324#1 TTCCAATCCTCCCGATATTTCC--CCAAACTGCCACCTGATTGTATAATTTCCCTTGCTG 179 * * * * *** ** ** ** * * * * * * * ** * ** consensus_9324#2 TTCGCTCGGCGCCCAGAAGCAGATTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCT 407 consensus_9324#3 TTCGCTTGGCGCCCAGAAGCAG-TTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCT 405 consensus_9324#0 TTCGCTCGGCGCCCAGAAGCAG-TTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCT 477 consensus_9324#1 TGCAAACGCCACACA--AGCCA--TGGACTACTCGAAGCTCT-TGCCAAGAAGGAGTTCT 234 * * * * * ** *** * ** ******* ** ************ *** consensus_9324#2 GCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGA 467 consensus_9324#3 GCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGA 465 consensus_9324#0 GCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGA 537 consensus_9324#1 GCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGA 294 ************************************************************ consensus_9324#2 CCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCA 527 consensus_9324#3 CCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCA 525 consensus_9324#0 CCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCA 597 consensus_9324#1 CCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATAAGTGCCGCGCCCA 354 ********************************************** ************* consensus_9324#2 CGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCG 587 consensus_9324#3 CGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCG 585 consensus_9324#0 CGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCG 657 consensus_9324#1 CGGCTATGCTGTCGACCGTGCTCGCCAAACTGGTGGCCCTCGGTGTGTTACTGCGAAGCG 414 *************************** ******************************** consensus_9324#2 TTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGG-AAAACAAATC 646 consensus_9324#3 TTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGGAAAACAAATC 645 consensus_9324#0 TTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGG-AAAACAAATC 716 consensus_9324#1 TTATGGCTAGCTGAAAATTGGGCGTAGAGCAGTGGGAAGCACCGGTGGG-AAAACAAATC 473 ********************* *************************** ********** consensus_9324#2 CAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTA 706 consensus_9324#3 CAGCGAACATCGGCTGCTAGCACCTTCAA------------------------------- 674 consensus_9324#0 CAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTA 776 consensus_9324#1 CAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTA 533 ***************************** consensus_9324#2 AGCAATCGTCAGTATTCAGTTGCACTTTT-TATCGAAACTATTGCGCGTAAGAGTAAGTA 765 consensus_9324#3 ------------------------------------------------------------ consensus_9324#0 AGCAATCGTCAGTATTCAGTTGCACTTTTCTATCGAATCTATTGCGCGTAAGAGTAAGTA 836 consensus_9324#1 AGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTA 593 consensus_9324#2 GAAGC------------------------------------------------------- 770 consensus_9324#3 ------------------------------------------------------------ consensus_9324#0 AGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGC 896 consensus_9324#1 AGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGC 653 consensus_9324#2 ------------------------------------------------------------ consensus_9324#3 ------------------------------------------------------------ consensus_9324#0 GATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAAC 956 consensus_9324#1 GATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAAC 713 consensus_9324#2 ------------------------------------------------------------ consensus_9324#3 ------------------------------------------------------------ consensus_9324#0 TAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTAT 1016 consensus_9324#1 TAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTAT 773 consensus_9324#2 ------------------------------------------------------------ consensus_9324#3 ------------------------------------------------------------ consensus_9324#0 ACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAC 1076 consensus_9324#1 ACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAA 833 consensus_9324#2 ------------------------------------------------------------ consensus_9324#3 ------------------------------------------------------------ consensus_9324#0 ACGTGTAACAGTAAAAAAAAAAAAAAAATCAGACGCTNACCTCGGGGG------------ 1124 consensus_9324#1 CACGTGTAACATTGTAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCGGG 893 consensus_9324#2 - consensus_9324#3 - consensus_9324#0 - consensus_9324#1 T 894 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||