|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9336#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1360 fasta sequence
[TTTTTTTTTTTTTTTTTTTAAAGCGATCAACG-TCATAATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT-CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC-GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA-TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG-ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTG-TGCGTGAGCGG-TTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC-CGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC-GGTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAGGGTCGATTTGCCTACCGAGGGAAACCCAACAAAGCCGACCCGGGCGTCACCGGTTTTGGAAACTTCGAAACCCTGTTCCGATGCACCGCCGCCACCCTTGGGAGTGATGAGCTCGCGCCGCAGCTTGGCCAACCGTGCCTTCAGCAAGCCCAAATGTCCCGCCGTAGCCTTGTTACGTTGGGTACGAGCCATCTCCGACTCGATTTGAGCAATCTTTTCCAGAATCGTACTCATCTTGCACGCTCTTGCAGCAGCTCGGAGTAGGTCAAATAATTGAACGAACGAGATAAATCATAGATAGAAGTGGCACGCAGCAGCACACAAATTCTGTCGGACGCGTGGGCGG]
[+] EMBL AGA282408 [TTTTTTTTTTTTTTTTTTTAAAGCGATCAACGTTCATAATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGTACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAG ]
[+] EMBL CNS08YMS [ aaCGATCAACT TCATAATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGCCCCCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTTCCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACCGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTG TGCGTGA CGG TTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCA ]
[+] EMBL CNS08RUI [ ctac TCATAATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTTTCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTTTTG TGCGTGA CGG TTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC GTTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGAC ]
[+] EMBL CNS08DH6 [ ATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGTTTCTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATCTTTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGATTCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTTCTACGGTGGCGTT ]
[+] EMBL CNS08YVF [ CTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTG CCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGTCGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTTCCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTGCCGCGTGAGCGGTTTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCAATTACCTGCCGACCG ]
[+] EMBL CNS08Q20 [ GTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGTTCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGGGGGGTCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGT ]
[-] EMBL BM647281 [ CAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCGTCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCAA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTGcgg ]
[-] EMBL CNS08DH5 [ CCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGTGCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCGAATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAAAATTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCAAAAAAACTCGTGCTCGAGCAGCTTCTTG TGCGTGAGCGG TTTCAGCACGTCCAACACCATGAAAATCAGATTGTAGGTACGTGCCACGCGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC GGTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAaa ]
[-] EMBL BM608736 [ ACAGAAACTTTGCCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGGTGATGGGCAGAGATTGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCACCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTG TGCGTGAGCGG TTTCAGCACGTCCAGCACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC GGTCGTCAGCGTGGcgg ]
[-] EMBL AGA281585 [ GTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTG TGCGTGAGCGG TTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC GGTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAGGGTCGATTTGCCTACCGAGGGAAACCCAACAAAGCCGACCCGGGCGTCACCGGTTTTGGAAACTTCGAAACCCTGTTCCGATGCACCGCCGCCACCCTTGGGAGTGATGAGCTCGCGCCGCAGCTTGGCCAACCGTGCCTTCAGCAAGCCCAAATGTCCCGCCGTAGCCTTGTTACGTTGGGTACGAGCCATCTCCGACTCGATTTGAGCAATCTTTTCCAGAATCGTACTCATCTTGCACGCTCTTGCAGCAGCTCGGAGTAGGTCAAATAATTGAACGAACGAGAT ]
[-] EMBL BM580473 [ CTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCACGGGTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAGGGTCGATTTGCCTACCGAGGGAAACCCAACAAAGCCGACCCGGGCGTCACCGGTTTTGGAAACTTCGAAACCCTGTTCCGATGCACCGCCGCCACCCTTGGGAGTGATGAGCTCGCGCCGCAGCTTGGCCAACCGTGCCTTCAGCAAGCCCAAATGTCCCGCCGTAGCCTTGTTACGTTGGGTACGAGCCATCTCCGACTCGATTTGAGCAATCTTTTCCAGAATCGTACTCATCTTGCACGCTCTTGCAGCAGCTCGGAGTAGGTCAAATAATTGAACGAACGAGATAAATCATAGATAGAAGTGGCACGCAGCAGCACACAAATTCTGTCGGACGCGTGGGCGG]
consensusID : consensus_9336#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 760 fasta sequence
[GAATCGNGCACGAGGTCTACCAGTGATATACGCTCGTCTCAAAGGTTAAAGCCATGCATGTCTAAGTACAAGCTTCCTAGAAAGTGAAACCGCATAAGGCTCAGTATAACAGCTATAATTTACAAGATCCTCATCCAAACAGTTACTTGGATAACTGTGGAAAAGCCAGAGCTAATACATGCATTATGCCGGGACTGTTGGCCTCCGGGTCGGCGGAACTGGTGCACTTATTAGTTAAACCAATCGCCTCCGGGCGCTTTGAGTTGAAATCTGGATAAGGATGCCGATCGTACGATCGCTTGCGACTGACGACAGATCTTTCAAATGTCTGCCCTATCAACTATTGATGGTAGTGTAGAGGACTACCATGGTTGCGACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAATGGCTACCACATCCAAGGAAGGCAGCAGGCGCGTAAATTACCCAATCCCGGCACGGGGAGGTAGTGACGAGAAATAACAATATGGACCTCTCTAACGATGGTCCATAATTGGAATGAGTTGAGCATAAATCCTTTTGCAAGGATCAACGTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCACTAGCGTATATTCAACAGTTGTTGCGGTTAAAAACGTTCGAAGTTTGATACCCCCGTNNCCAGAACTCGCGTACCGTACGCGNGGAGCCCCGGACTTCTACGGTTTGGGGACCGGACCGGNGTACAGCGCTACNCGGGTGG]
[+] EMBL BX469538 [GAATCGNGCACGAGGTCTACCAGTGATATACGCTCGTCTCAAAGGTTAAAGCCATGCATGTCTAAGTACAAGCTTCCTAGAAAGTGAAACCGCATAAGGCTCAGTATAACAGCTATAATTTACAAGATCCTCATCCAAACAGTTACTTGGATAACTGTGGAAAAGCCAGAGCTAATACATGCATTATGCCGGGACTGTTGGCCTCCGGGTCGGCGGAACTGGTGCACTTATTAGTTAAACCAATCGCCTCCGGGCGCTTTGAGTTGAAATCTGGATAAGGATGCCGATCGTACGATCGCTTGCGACTGACGACAGATCTTTCAAATGTCTGCCCTATCAACTATTGATGGTAGTGTAGAGGACTACCATGGTTGCGACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAATGGCTACCACATCCAAGGAAGGCAGCAGGCGCGTAAATTACCCAATCCCGGCACGGGGAGGTAGTGACGAGAAATAACAATATGGACCTCTCTAACGATGGTCCATAATTGGAATGAGTTGAGCATAAATCCTTTTGCAAGGATCAACGTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCACTAGCGTATATTCAACAGTTGTTGCGGTTAAAAACGTTCGAAGTTTGATACCCCCGTNNCCAGAACTCGCGTACCGTACGCGNGGAGCCCCGGACTTCTACGGTTTGGGGACCGGACCGGNGTACAGCGCTACNCGGGTGG]
consensusID : consensus_9336#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence
[ATGACTCGAGCAGAATCGCAGAGGNTTATTAAGACATTCTCGAAAGTTGAGCTCCAAGCAGGTGCGAGAGCAATCGATCTATCGTGCAGTAAAAGATCGACCAAAGCGCAGTGACAGTTGAACGGTACAGAACATGGCGCACAAACTAATATCGTGTAGTGCCTGTGTGCTGGTGGCGCTTTTCGTGCTGAGTGCAGTGAACGTATCAAGGGCAGGCGTCGCTTTCGCTACGGGTCCTGTCACGTGGTGAGCGATCCGTGTTTAACCAAACTGCACAGAACNAGAACGTGCGAAAGGTAACCACAACTTGTGGCATGGGCACGTTGTACAACGNCCCGCAACAAGGGGCGATCGACTAGCTTCACTGAAAAATACGTGTGACTGCGAGCAAGTTGAACGCNAGATGCGTCCGAACCGGACGACCATGTCCTCGATCAGGTGCGTACGTCTACCGGTGCCGGGAGCATCCGGGCAAGGCAAGTCCGTGCCCGGTCCTGAGCTGGTAACAAGCCGATCCGATCCGTNGTGCTTC]
[+] EMBL AL696822 [ATGACTCGAGCAGAATCGCAGAGGNTTATTAAGACATTCTCGAAAGTTGAGCTCCAAGCAGGTGCGAGAGCAATCGATCTATCGTGCAGTAAAAGATCGACCAAAGCGCAGTGACAGTTGAACGGTACAGAACATGGCGCACAAACTAATATCGTGTAGTGCCTGTGTGCTGGTGGCGCTTTTCGTGCTGAGTGCAGTGAACGTATCAAGGGCAGGCGTCGCTTTCGCTACGGGTCCTGTCACGTGGTGAGCGATCCGTGTTTAACCAAACTGCACAGAACNAGAACGTGCGAAAGGTAACCACAACTTGTGGCATGGGCACGTTGTACAACGNCCCGCAACAAGGGGCGATCGACTAGCTTCACTGAAAAATACGTGTGACTGCGAGCAAGTTGAACGCNAGATGCGTCCGAACCGGACGACCATGTCCTCGATCAGGTGCGTACGTCTACCGGTGCCGGGAGCATCCGGGCAAGGCAAGTCCGTGCCCGGTCCTGAGCTGGTAACAAGCCGATCCGATCCGTNGTGCTTC]
consensusID : consensus_9336#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 491 fasta sequence
[AGATCCCCGAGGTTATCCAAGAAGTGTGCTGAACATTTCGGGAAGGATTTTTCCGAGCGTTTTTTCACGATAAAAATGTCGTACCTCGCACGCAAAGGACCTGCCGTCTACTCTGCCCTCGGCAAATGGGCCTACAATATGGCCGGATTCAACCAGTACGGTCTGCATCGCGACGATTGTCTGTATGAGAACGAGGACGTGAAGGAGGCGATCCGCGCCTGCCGGAGAAGCTGAAGGATGAGCGCAATTTCCGCATCACGCGCGCCCTCCACTGTCGATGACGAAAACGATCCTGCCGAAGGAACAGTGGACCAAGTACGAGGAGGACACCAAATACCTCGAGCCGTACCTGCAGGAGGTGGTCCGGGAGCGCGAGGAGAAGGTCAAGTGGGAATCGAACAAGTAAACCTTTAATTCGTGCGAGATGCGTTTCGAAACGAAGATATGCGCATTGTGCCGTGGCTGGTGGCGGTAACTCGACCGCGCGTTNA]
[+] EMBL AL694972 [AGATCCCCGAGGTTATCCAAGAAGTGTGCTGAACATTTCGGGAAGGATTTTTCCGAGCGTTTTTTCACGATAAAAATGTCGTACCTCGCACGCAAAGGACCTGCCGTCTACTCTGCCCTCGGCAAATGGGCCTACAATATGGCCGGATTCAACCAGTACGGTCTGCATCGCGACGATTGTCTGTATGAGAACGAGGACGTGAAGGAGGCGATCCGCGCCTGCCGGAGAAGCTGAAGGATGAGCGCAATTTCCGCATCACGCGCGCCCTCCACTGTCGATGACGAAAACGATCCTGCCGAAGGAACAGTGGACCAAGTACGAGGAGGACACCAAATACCTCGAGCCGTACCTGCAGGAGGTGGTCCGGGAGCGCGAGGAGAAGGTCAAGTGGGAATCGAACAAGTAAACCTTTAATTCGTGCGAGATGCGTTTCGAAACGAAGATATGCGCATTGTGCCGTGGCTGGTGGCGGTAACTCGACCGCGCGTTNA]
consensusID : consensus_9336#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 195 fasta sequence
[ACACACCCCACCGAACCCGCGCACCCAGTGGCGGACGACAGCAACACGCGCAAAGACCCCCGGATAGCCGGGCTGAGCGCATCCAGAACCCCACGAAACCACGCCGATCAGCTTGCCAACAGCAACGAGCGGACCACCGGAGTCACCCGGGCAAGCGTCCATCCCACCCGGCGGGTATCCGGCACACAGCAAACG]
[+] EMBL CNS09FNL [ACACACCCCACCGAACCCGCGCACCCAGTGGCGGACGACAGCAACACGCGCAAAGACCCCCGGATAGCCGGGCTGAGCGCATCCAGAACCCCACGAAACCACGCCGATCAGCTTGCCAACAGCAACGAGCGGACCACCGGAGTCACCCGGGCAAGCGTCCATCCCACCCGGCGGGTATCCGGCACACAGCAAACG]
consensusID : consensus_9336#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 133 fasta sequence
[CTTTATGTGAAATGAGATGGATGGAGCCTGCATCTATTTTCCTTCCTCTATCCTATCTCTATTTCATTTCTTCTCCCCCTCCGTCAACCGTCAAAATCATCATCTTTCTGTACTGTGCCCCCTGTACACACAT]
[+] EMBL CNS09DXA [CTTTATGTGAAATGAGATGGATGGAGCCTGCATCTATTTTCCTTCCTCTATCCTATCTCTATTTCATTTCTTCTCCCCCTCCGTCAACCGTCAAAATCATCATCTTTCTGTACTGTGCCCCCTGTACACACAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ------------------------------------------------------------
consensus_9336#0 TTTTTTTTTTTTTTTTTTTAAAGCGATCAACGTCATAATTATTTGCGCACGTTCTTTTGT 60
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ------------------------------------------------------------
consensus_9336#0 TTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCAT 120
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ------------------------------------------------------------
consensus_9336#0 TTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATC 180
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ------------------------------------------------------------
consensus_9336#0 GTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACAC 240
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ------------------------------------------------------------
consensus_9336#0 AAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTTCCAC 300
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ------------------------------------------------------------
consensus_9336#0 GGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGG 360
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ------------------------------------------------------------
consensus_9336#0 TTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATCGTCAAA 420
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ------------------------------------------------------------
consensus_9336#0 GTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAG 480
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ------------------------------------------------------------
consensus_9336#0 CTCCTCGATCGAAATCTGATCGATCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCG 540
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 -------------------------------------GAATCGNGCACGAGGTCTACCAG 23
consensus_9336#0 GTTGCCCTCGATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTC 600
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 TGATATACGCTCGTCTCAAAGGTTAAAGCCATGCATGTCTAAGTACAAGCTTCCTAGAAA 83
consensus_9336#0 CGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGA 660
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 GTGAAACCGCATAAGGCTCAGTATAACAGCTATAATTTACAAGATCCTCATCCAAACAGT 143
consensus_9336#0 CTGTGCTACGGTGGCGTTCAGGTTCACT-CCGCCCTTGTCCTTCCGGCGGTAGGAAATGT 719
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 TACTTGGATAACTGTGGAAAAGCCAGAGCTAATACATGCATTATGCCGGGACTGTTGGCC 203
consensus_9336#0 TCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCT 779
consensus_9336#2 ------------------------------------------------------------
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 TCCGGGTCGGCGGAACTGGTGCACTTATTAGTTAAACCAATCGCCTCCGGGCGCTTTGAG 263
consensus_9336#0 TGTGCGTGAGCGGTTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCA 839
consensus_9336#2 ----------------------ATGACTCGAGCAGAATCGCAGAGGNTTATTAAGACATT 38
consensus_9336#3 ------------------------------------------------------------
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 TTGAAATCTGGATAAGGATGCCGATCGTACGATCGCTTGCGACTGACGACAGATCTTTCA 323
consensus_9336#0 CCGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCA 899
consensus_9336#2 CTCGAAAGTTGAGCTCCAAGCAGGTGCGAGAGCAATCGATCTATCGTGCAGTAAAAGATC 98
consensus_9336#3 -----------AGATCCCCGAGGTTATCCAAGAAGTGTGCTGAACATTTCGGGAAGGATT 49
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 AATGTCTGCCCTATCAACTATTGATGGTAGTGTAGAGGACTACCATGGTTGCGACGGGTA 383
consensus_9336#0 AATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCACGGTCGTCAGCG 959
consensus_9336#2 GACCAAAGCGCAGTGACAGTTGAACGGTACAGAACATGGCGCACAAACTAATATCGTGTA 158
consensus_9336#3 TTTCCGAGCGTTTTTTCACGATAAAAATGTCGTACCTCGCACGCAAAGGACCTGCCGTCT 109
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 ACGGGGAATCAGGGTTCGATTCCGGAGAG-GGAGCCTGAGAAATGGCTACCACATCCA-- 440
consensus_9336#0 TGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAGGGT-- 1017
consensus_9336#2 GTGCCTGTGTGCTGGTGGCGCTTTTCGTGCTGAGTGCAGTGAACG--TATCAAGGGCA-- 214
consensus_9336#3 ACTCTGCCCTCGGCAAATGGGCCTACAATATGGCCGGATTCAACCAGTACGGTCTGCATC 169
consensus_9336#4 ------------------------------------------------------------
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 AGGAAGGCAGCAGGCGCGTAAATTACCCAATCCCGGCACGGGGAGGTAGTGACGAGAAAT 500
consensus_9336#0 CGATTTGCCTACCGAGGGAAACCCAACAAAGCCGACCCGGGCGTCACCGGTTTTGGAAAC 1077
consensus_9336#2 GGCGTCGCTTTCGCTACGGGTCCTGTCACGTGGTGAGCGATCCGTGTTTAACCAAACTGC 274
consensus_9336#3 GCGACGATTGTCTGTATGAGAACGAGGACGTGAAGGAGGCGATCCGCGCCTGCCGGAGAA 229
consensus_9336#4 ----ACACA-CCCCACCGAACCCGCGCACCCAGTGGCGGACGACAGCAACACGCGCAAAG 55
consensus_9336#5 ------------------------------------------------------------
consensus_9336#1 AACAATATG-GACCTCTCTAACGATGGTCCATAATTGGAATGAGTTGAGCATAAATCCTT 559
consensus_9336#0 TTCGAAACC-CTGTTCCGATGCACCGCCGCCACCCTTGGGAGTGATGAGCTCGCGCCGCA 1136
consensus_9336#2 ACAGAACNA-GAACGTGCGAAAGGTAACCACAACTTGTGGCATGGGCACGTTGTACAACG 333
consensus_9336#3 GCTGAAGGATGAGCGCAATTTCCGCATCACGCGCGCCCTCCACTGTCGATGACGAAAACG 289
consensus_9336#4 ACCCCCGGATAGCCGGGCTGAGCGCATC---CAGAA--CCCCACGAAACCACG-CCGATC 109
consensus_9336#5 -CTTTATGTGAAATGAGATGGATGGAGC---CTGCA--TCT-ATTTTCCTTCC-TCTATC 52
consensus_9336#1 TTGCAAGGATCAACGTGGAGGGCAAGTC---TGGTG--CCA---GCAGCCGCG-GTAATT 610
consensus_9336#0 GCTTGGCCAACCGTGCCTTCAGCAAGCC---CAAATGTCCCGCCGTAGCCTTG-TTACGT 1192
consensus_9336#2 NCCCGCAACAAGGGGCGATCGACTAGCTTCACTGAAAAATACGTGTGACTGCGAGCAAGT 393
consensus_9336#3 ATCCTGCCGAAGGAACAGTGGACCAAGTACGAGGAGGACACCAAATACCTCGAGCCGTAC 349
*
consensus_9336#4 AGCTTGCCAACAGC---AACGAGCGGACCACCGGAGTCACC---CGGGCAAGCGTCCATC 163
consensus_9336#5 CTATCTCTATT--T---CATTTCTTCTCCCCCTCCGTCAAC---CGTCAAAATCATCATC 104
consensus_9336#1 CCAGCTCCACTAGCGTATATTCAACAGTTGTTGCGGTTAAAAA-CGTTCGAAGTTTGATA 669
consensus_9336#0 TGGGTACGAGCCAT--CTCCGACTCGATTTGAGCAATCTTTTC-CAGAATCGTACTCATC 1249
consensus_9336#2 TGAACGCNAGATGCG--TCCGAACCGGACGACCATGTCCTC----GATCAGGTGCGTACG 447
consensus_9336#3 CTGCAGGAGGTGGTC--CGGGAGCGCGAGGAGAAGGTCAAGTGGGAATCGAACAAGTAAA 407
* *
consensus_9336#4 CCACCCGGCGG-GTA----TCCGGCACACAGCAAACG----------------------- 195
consensus_9336#5 TTTCTGTACTGTGCC----CCCTGTACACA-CAT-------------------------- 133
consensus_9336#1 CCCCCGTNNCCAGAA----CTC-GCGTACCGTACGCGNGGAGCCCCGGACTTCTACGGTT 724
consensus_9336#0 TTGCACGCTCTTGCAGCAGCTCGGAGTAGGTCAAATAATTGAACGAACGAGATAAATCAT 1309
consensus_9336#2 TCTACCGGTGCCGGGAGCATCC-GGGCAAGGCAAGTCCGTG--CCCGGTCCTGAGCTGGT 504
consensus_9336#3 CCTTTAATTCGTGCGAG-ATGCGTTTCGAAACGAAGATATGCGCATTGTGCCGTGGCTGG 466
* *
consensus_9336#4 ---------------------------------------------------
consensus_9336#5 ---------------------------------------------------
consensus_9336#1 TGGGGACCGGACCGGNGTACAGCGCTACNCGGGTGG--------------- 760
consensus_9336#0 AGATAGAAGTGGCACGCAGCAGCACACAAATTCTGTCGGACGCGTGGGCGG 1360
consensus_9336#2 AACAAGCCGATCCGATCCGTNGTGCTTC----------------------- 532
consensus_9336#3 TGGCGGTAACTCGACCGCGCGTTNA-------------------------- 491
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||