These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9337#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1811 fasta sequence [CCGAGCATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCACGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACG-AGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAG-CCGGTGCGACGG-CCAGCGGGACTGTCT-CGGC-GGGGACGACGAGGAGAACTGCGACAACTACGAGGTGCCGCACCGGGCGCCCCTCTGCAGCAAGGCGGAGTTTACCTGCACCGATCGGGCCTGCATCCCGGCCGACCTGGTGTGCGACGGCGTCCAGCACTGTCTGGACGGGTCGGACGAAACGATCGGCTGCATCGACATCGCAGGGAAGTGCAAGGGCTTCCTGTGCCGCAACAAGCACTGCCTGCAGTCGCACCACTGGGTGTGCGACGGGCTGGACGACTGTGGCGACGGCTCGGACGAGGAGCACTGCCTGAGCGAGTGTACGCTCGAGCACGGGAAGTACGAGTGCGCGAACAACCACACCTGCGTGGACGTGACGCAGGTGTGCAACGGGGCGGACGATTGCGGCGACGGCAGCGACGAGGGCCCGGGCTGTAAGGTGCCGGCGGACGGTTGCAAGGCGCTGCACTGCGCGCCGCAGACGTGCAAGGTGCTGCCGGACGGGAAGCCGGTCTGCCTGTGCGGCGTCGGCTTCCGGTTCGAGCCGAGCGCGGGCCGGTGCGTGGACGTGAACGAGTGCGCCCGGTACGGGCTGTGCTCGCAGGGCTGCATCAACACGCCCGGCTCGTTCCGCTGCACCTGCATCGACCAGTTCCACCTGATGCGGGACGGGCGCACGTGCGAGCTGTCGTCCGGAACGGAGGCGCTGATGCTGTACACCACCCAGAAGGCTGTCGGTGCGATGTACCTGACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCTGTCGCAGGTGATCGGCGTGGCGTACGACGGCAGCCACGTGTACTGGACGGACATCTCGCACAAGACGGAGTCCGATCGAGCGGTCGCTGGAGGACGGCAGCGACCGGGTGCAGCTGCTCACCGCCGGCCTGATCTCGCCCGAGGACATCGCGCTCGACTGGCTGACCGGGAACATCTACTTCAGCGACAGCGGCCAGATGGCACATTGCCGTCTGCTCGAGCGACGGCTACCACTTGCCGGGCGATCGTGCAGGACGAGCTGCACAAGCCCGCGCGGGATCGCGCTGCTGCCGCAAAACGGTACGCTGTTCTACAGCGACTGGGGCAACAACGCGATGATCGGGCGGGGCCCCGGATGGACGGTACCGAGCAGCAGGTCGTCGTCAGCGACGGCATCCACTTGGCCGAACGGGCTGACGCTCGACTGGCCCAACC] [+] EMBL BM603173 [CCGAGCATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCACGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACG AGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAG CCGGTGCGACGG CCAGCGGGACTGTCT CGGC GGGGACGACGAGGAGAACTGCGACAACTACGAGGTGCCGCACCGGGCGCCCCTC ] [+] EMBL BM609693 [CCG GCATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACGAAGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAGCCCGGTGCGACGGCCCAGCGGGACTGTCTCCGGCGGGGGACGACGAGGAG ] [+] EMBL BM616537 [ ccgATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCACGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACG AGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCAT ] [+] EMBL BM599084 [ ccgCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACG AGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAG CCGG ] [+] EMBL BM606564 [ ccgGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAG CCGGTGCGACGG CCAGCGGGACTGTCT CGGC GGGGACGACGAGGAGAACTGCGACAACTACGAGGTGCCGCACCGGGCGCCCCTCTGCAGCAAGGCGGAGTTTACCTGCACCGATCGGGCCTGCATCCCGGCCGACCTGGTGTGCGACGGCGTCCAGCACTGTCTGGACGGGTCGGACGAAACGATCGGCTGCATCGACATCGCAGGGAAGTGCAAGGGCTTCCTGTGCCGCAACAAGCACTGCCTGCAGTCGCACCACTGGGTGTGCGACGGGCTGGACGACTGTGGCGACGGCTCGGACGAGGAGCACTGCCTGAGCGAGTGTACGCTCGAGCACGGGAAGTACGAGTGCGCGAACAACCACACCTGCGTGGACGTGACGCAGGTGTGCAACGGGGCGGACGATTGCGGCGACGGCAGCGACGAGGGCCCGGGCTGTAAGGTGCCGGCGGACGGTTGCAAGGCGCTGCACTGCGCGCCGCAGACGTGCAAGGTGCTGCCGGACGGGAAGCCGGTCTGCCTGTGCGGCGTCGGCTTCCGGTTCGAGCCGAGCGCGGGCCGGTGCGTGGACGTGAACGAGTGCGCCCGGTACGGGCTGTGCTCGCAGGGCTGCATCAACACGCCCGGCTCGTTCCG ] [+] EMBL BM584090 [ CCGGTTCGAGCCGAGCGCGGGCCGGTGCGTGGACGTGAACGAGTGCGCCCGGTACGGGCTGTGCTCGCAGGGCTGCATCAACACGCCCGGCTCGTTCCGCTGCACCTGCATCGACCAGTTCCACCTGATGCGGGACGGGCGCACGTGCGAGCTGTCGTCCGGAACGGAGGCGCTGATGCTGTACACCACCCAGAAGGCTGTCGGTGCGATGTACCTGACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCTGTCGCAGGTGATCGGCGTGGCGTACGACGGCAGCCACGTGTACTGGACGGACATCTCGCACAAGACGGAGTCCGATCGAGCGGTCGCTGGAGGACGGCAGCGACCGGGTGCAGCTGCTCACCGCCGGCCTGATCTCGCCCGAGGACATCGCGCTCGACTGGCTGACCGGGAACATCTACTTCAGCGACAGCGGCCAGATGGCACATTGCCGTCTGCTCGAGCGACGGCTACCACTTGCCGGGCGATCGTGCAGGACGAGCTGCACAAGCCCGCGCGGGATCGCGCTGCTGCCGCAAAACGGTACGCTGTTCTACAGCGACTGGGGCAACAACGCGATGATCGGGCGGGGCCCCGGATGGACGGTACCGAGCAGCAGGTCGTCGTCAGCGACGGCATCCACTTGGCCGAACGGGCTGACGCTCGACTGGCCCAACC] consensusID : consensus_9337#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1409 fasta sequence [TTTTCCAGCATCCGCCGCTTTTTGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAG-TGTGTGAGTGGCGCTGTGCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGATGCTGTACACCACCCAGAAGGCGGTCGGTGCGATGTATCCCACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCGTGTACGAGAACCAGGCGCTGGTGGTGAACCGGGCCCCGCCCGGCTCGATCGGCCAGTGCCAGCTGTACGGCCAGTACCGGTGCGAGCCGTACCGCGTGAACGTGCCGCCGACCGGACTGCTGCTGGTCGTGCAGGAATCGCGCCACCGATGGTGCCGAACGTGTGCGACCGGGCCAACTGCACG-CATCTGTGCGTGGCCGTCGGGCCGGTCGCTCGCTGCATCTGCGAGAACGGGCTGGAGATAGCGGAGGGCGATCGGTGTGCCGAGCCGAAGATGGGGGCCCGCGCGATGAAACCGTACCGCGGCACCGTGCTGGTTGGGGCGGCA-CGCGGGCGCA-CAAACGACAGACGGTGCCGACGACGAAGGGGCCGGCTGGCTGGCCGGCCTGCTGCACGTGCTGCTGTACGTGACGCTCGTGGGTGCGACGATCGGGGCCGGGTGGTACGTCTATCGCCAGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACGAGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGAGGGAAGGAACGTGCTCACGCTGGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAACGGGCCGGACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGTGCT-GGGAACCGAGTGGATGTAGCTAGATTTAAACAAAAAAAAAAAAAAAACGGACGCGTGGGCGG] [+] EMBL CNS09FYA [TTTTCCAGCATCCGCCGCTTTTTGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAG TGTGTGAGTGGCGCTGTGCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGAT ] [+] EMBL CNS09D80 [ agATCCGCCGCTTTTTGTCGTGT CTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGC AG TGTGTGAGTGGCGCTGTGCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGATGCTGTACACCACCCAGAAGGCGGTCGGTGCGATGTATCCCACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCGTGTACGAGAACCAGGCGCTGGTGGTGAACCGGGCCCCGCCCGGCTCGATCGGCCAGTGCCAGCTGTACGGCCAGTACCGGTGCGAGCCGTACCGCGTGAACGTGCCGCCGACCGGACTGCTGCTGGTCGTGCAGGAATCGCGCCACCGATGGTGCCGAACGTGTGCGACCGGGCCAACTGCACG CATCTGTGCGTGGCCGTCGGGCCGGTCGCTCGCTGCATCTGCGAGAACGGGCTGGAGATAGCGGAGGGCGATCGGTGTGCCGAGCCGAAGATGGGGGCCCGCGCGATGAAACCGTACCGCGGCACCGTGCTGGTTGGGGCGGCA CGCGGGCGCA CAAACGACAGACGGTGCCGACGACGAAGGGGCCGGCTGGCTGGCCGGCCTGCTGCACGTGCTGCTGTACGTGACGCTCGTGGGTGCGACGA ] [+] EMBL CNS09D97 [ TCCGCCGCTTTTTGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTTGTGTGAGTGGCGCTGTGCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGATGCTGTACACCACCCAGAAGGCGGTCGGTGCGATGTACCTGACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCGTGTACGAGAACCAGGCGCTGGTGGTGAACCGGGCCCCGCCCGGCTCGATCGGCCAGTGCCAGCTGTACGGCCAGTACCGGTGCGAGCCGTACCGCGTGAACGTGCCGCCGACCGGACTGCTGCTGGTCGTGCAGGAATCGCGCCACCGATGGTGCCGAACGTGTGCGACCGGGCCAACTGCACGACATCTGTGCGTGGCCGTCGGGCCGGTCGCTCGC ] [+] EMBL BX620597 [ GAT GGGGCCCGCGCGATGAAACCGTACCGCGGCACCGTGCTGGTTGGGGCGGCAGCGCCGGCGCAGCCAACGACAGACGGTGCCGACGACGAAGGGGCCGGCTGGCTGGCCGGCCTGCTGCACGTGCTGCTGTACGTGACGCTCGTGGGTGCGACGGTCGGGGCCGGGTGGTACGTCTATCGCCAGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACGAGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGAGGGAAGGAACGTGCTCACGCTGGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAACGGGCCGGACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAAT ] [-] EMBL BM583599 [ GGGCCCGGGTGGTACGTCTATCGCCAGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACGAGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGAGGGAAGGAACGTGCTCACGCTGGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAACGGGCCGGACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGTGCTGGGGAACCGAGTGGATGTAGCTAGATTTAAACAAAAAAAAAAAAAAAACGGACGCGTGGGCGG] [-] EMBL CNS09OW5 [ AGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACGAGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGAGGGAAGGAACGTGCTCACGCTGGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAACGGGCCGGACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGTGCT GGGAACCGA ] [-] EMBL CNS09D98 [ GACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGTGCT GGGAACCGAGTGGGTGTAGC ] consensusID : consensus_9337#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 613 fasta sequence [CCGCCCACGCGTCCGTGCGCGAATCACACCTGCACCCATCTCTGTCTGCTCACCTCGAACGCGACGTACGCGTGCGCCTGCCCGCAAGGAATGGAGCTGTCGCGGGACAAGCACAGCTGCGCCAGTGTCGCCAAGCGGCAGGACATCCTGCTCGGCATCGGCCACTATCTGGTGACGCTCAAGCATCACCCGTTCGGGCGGCATGCGACGGGGCGCGGAGAACCGCTGCCGGTCGCCACGATCAGCCGGCTCGCGTTCAACAGCCTGACTGGCGAGCTGTTCGTCGCGGACAACAGCCGCCGGGCGATCTACACGGTCGAGCTCGGGTCGCTCCGCACCCAGCGGCTGGTCCGGAGCGGCATCGGCCGGATAACAGCACTCGCTTTCGACTACCTAAGCAACACGCTGTACTGGTCCGACGCGGAACGGTCCACTATTGAGATATATAGTTTGCAGACCCGGCATCGTTCGATCATTCAGCACTACCTCGGGGACGATGCGCCGGTCGCACTCGCGCTCATCCCCGAGACGGGCAAGATGTTCGTGGCGCTCCGGTCGCCCTCCGGCCACACGCACATCGACCGGCAGGACATGACCGGCCGTGGTCCGCACA] [+] EMBL BM612880 [CCGCCCACGCGTCCGTGCGCGAATCACACCTGCACCCATCTCTGTCTGCTCACCTCGAACGCGACGTACGCGTGCGCCTGCCCGCAAGGAATGGAGCTGTCGCGGGACAAGCACAGCTGCGCCAGTGTCGCCAAGCGGCAGGACATCCTGCTCGGCATCGGCCACTATCTGGTGACGCTCAAGCATCACCCGTTCGGGCGGCATGCGACGGGGCGCGGAGAACCGCTGCCGGTCGCCACGATCAGCCGGCTCGCGTTCAACAGCCTGACTGGCGAGCTGTTCGTCGCGGACAACAGCCGCCGGGCGATCTACACGGTCGAGCTCGGGTCGCTCCGCACCCAGCGGCTGGTCCGGAGCGGCATCGGCCGGATAACAGCACTCGCTTTCGACTACCTAAGCAACACGCTGTACTGGTCCGACGCGGAACGGTCCACTATTGAGATATATAGTTTGCAGACCCGGCATCGTTCGATCATTCAGCACTACCTCGGGGACGATGCGCCGGTCGCACTCGCGCTCATCCCCGAGACGGGCAAGATGTTCGTGGCGCTCCGGTCGCCCTCCGGCCACACGCACATCGACCGGCAGGACATGACCGGCCGTGGTCCGCACA] consensusID : consensus_9337#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 513 fasta sequence [GCGCCGCTGATCGCCGACAGCGCGTCCGCCTCGGCCGGATGCTGCCACAGCGTGACACGTCCCTTCCCTCCACCTTGCACAGCTCCACCTGCGCGTACTCGCTCGTGCTCAGCTCGGTGTTGTTGAAGTGTATGCCGACGTCAAACTTGTGCTGCCTAGCCGCTCCTCGATGACGTGCGTTTGCGGACCACGGCCGGTCATGTCCTGCCGGTCGATGTGCGTGTGGCCGGAGGCGACCGGAGCGCCACGAACATCTTGCCCGTCTCGGGGATGAGCGCGAGTTCGACCGGCGCATTGTCCCCGAGGTAGTGCTGAATGATCGAACGATGCCGGGTCTGCAAACTATATATCTCAATAGTGGACCGTTCCGCGTCGGACCAGTACAGCGTGTTGCTTAGGTAGTCGAAAGCGAGTTCTGTTATCCGGCCGATGCCGCTCCGGACCAGCCGCTGGGTGCGGACGACCCGAGCTCGACCGTGTAGATCGCCCTCCTACTCACTGGGGTCTCATCGC] [+] EMBL CNS09D81 [GCGCCGCTGATCGCCGACAGCGCGTCCGCCTCGGCCGGATGCTGCCACAGCGTGACACGTCCCTTCCCTCCACCTTGCACAGCTCCACCTGCGCGTACTCGCTCGTGCTCAGCTCGGTGTTGTTGAAGTGTATGCCGACGTCAAACTTGTGCTGCCTAGCCGCTCCTCGATGACGTGCGTTTGCGGACCACGGCCGGTCATGTCCTGCCGGTCGATGTGCGTGTGGCCGGAGGCGACCGGAGCGCCACGAACATCTTGCCCGTCTCGGGGATGAGCGCGAGTTCGACCGGCGCATTGTCCCCGAGGTAGTGCTGAATGATCGAACGATGCCGGGTCTGCAAACTATATATCTCAATAGTGGACCGTTCCGCGTCGGACCAGTACAGCGTGTTGCTTAGGTAGTCGAAAGCGAGTTCTGTTATCCGGCCGATGCCGCTCCGGACCAGCCGCTGGGTGCGGACGACCCGAGCTCGACCGTGTAGATCGCCCTCCTACTCACTGGGGTCTCATCGC] consensusID : consensus_9337#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 101 fasta sequence [CCGCCCACGCGTCCGTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCCAGCCGGTGCGACGGCCACCGGGA] [+] EMBL BM607351 [CCGCCCACGCGTCCGTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCCAGCCGGTGCGACGGCCACCGGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9337#0 ---CCGAGCATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGT 57 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 TTTTCCAGCATCCGCCGCTTTTTGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGT 60 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 GAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGT 117 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 GAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGT 120 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 ACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAG 177 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 ACAGCGAGTGTGTGAGTGGCGCTGTGC---CCCGCGTACATGCGTTTCGTACTGTCCCAG 177 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 CAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTG 237 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 CAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTG 237 consensus_9337#2 ---------------------------------------CCGCCCACGCGTCCGTGCGCG 21 consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 TTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTT 297 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 TTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTT 297 consensus_9337#2 AATCACACCTGCACCCATCTCTGTC-TGCTCACCTCGAACGCGACGTACGCGTGCGCCTG 80 consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 GCCACGACAAATATGCGGTTAGTGGTGTTAGTG--GCGACGGTGGTGCTGCTTGCAGCGA 355 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 GCCGCGACAAATATGCGGTTAGTGGTGTTAGTG--GCGACGGTGATGCTGTACACCACCC 355 consensus_9337#2 CCCGCAAGGAATGGAGCTGTCGCGGGACAAGCACAGCTGCGCCAGTGTCGCCAAGCGGCA 140 consensus_9337#3 -----------------------------------------GCGCCGCTGATCGCCGACA 19 consensus_9337#0 ACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCG 415 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 AGAAGGCGGTCGGTGCGATGTATCCCACCTCGCTG--CACCAGTACTACGTCGCGAAGGA 413 consensus_9337#2 GGACATCCTGCTCGGCATCGGCCACTATCTGGTGACGCTCAAGCATCACCCGTTCGGGCG 200 consensus_9337#3 GCGCGTCCGCCTCGGC--CGGATGCTGCCACAGCG-----TGACACGTCCCTTCCCTCCA 72 consensus_9337#0 GTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACG 475 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 GCGTGTACGAGAACCAG-GCGCTGGTGGTGAACCGGGCCCCGC--CCGGCTCGATCGGCC 470 consensus_9337#2 GCATGCGACGGGGC----------GCGGAGAACCGCTGCCGGT---CGCCACGATCAGCC 247 consensus_9337#3 CCTTGCACAGCTCC-------------ACCTGCGCGTACTCGCTCGTGCTCAGCTCGGTG 119 consensus_9337#0 ATATACAGGACTGTGCCGACGGCAGCGACGAGTCTGGATGTGATTAC-TTTCTCTGCAGG 534 consensus_9337#4 ---------------------------------CCGCCCACGCGTCCGTTTCTCTGCAGG 27 consensus_9337#1 AGTGCCAGCTGTACGGCCAGTACCGGTGCGAGCCGTACCGCGTGAACGTGCCGCCG---- 526 consensus_9337#2 GGCTCGCGTTCAACAGCCTG-ACTGGCGAGCTGTTCGTCGCGGACAACAGCCGCCG---- 302 consensus_9337#3 TTGTTGAAGTGTATGCCGACGTCAAACTTGTGCTGCCTAGCCGCTCCTCGATGACGTGCG 179 * consensus_9337#0 GCGCCGTTCTGGTACCGGTGCCGGCACG--AGTCGACCTGCATC-AGCGGC-TCGAGCCG 590 consensus_9337#4 GCGCCGTTCTGGTACCGGTGCCGGCACG--AGTCGACCTGCATC-AGCGGC-TCCAGCCG 83 consensus_9337#1 --ACCGGACTGCTGCTGGT-CGTGCAGG--AATCGCGC--CACC-GATGGTGCCGAACGT 578 consensus_9337#2 --GGCGATCTACA--CGGT-CGAGCTCG--GGTCGCTCCGCACCCAGCGGC--TGGTCCG 353 consensus_9337#3 TTTGCGGACCACGGCCGGTCATGTCCTGCCGGTCGATGTGCGTGTGGCCGGAGGCGACCG 239 ** * *** * * *** * * * consensus_9337#0 GTGCGAC--GGCCAGCGGGAC-TGTCTCGGCGGGGACGACGAGGAGAACTGC-GACAA-C 645 consensus_9337#4 GTGCGAC--GGCCACCGGGA---------------------------------------- 101 consensus_9337#1 GTGCGACCGGGCCAACTGCACGCATCTGTGCGTGGCCGTCGGGCCGGTCGCT-CGCTG-C 636 consensus_9337#2 GAGCGGC---ATCGGCCGGATAACAGCACTCGCTTTCGACTACCTAAGCAACACGCTG-T 409 consensus_9337#3 GAGCGCCACGAACATCTTGCCCGTCTCGGGGATGAGCGCGAGTTCGACCGGCGCATTGTC 299 * *** * * * consensus_9337#0 TACGAGGTGCCGCACCGGGCGCCCCTCTGCAGCAAGGCGGAGTTTACCTGCACCGATCGG 705 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 ATCTGCGAGAACGGGCTGGAGATAGCGGAGGGCGATC---GGTGTGCCGAGCCGAAGATG 693 consensus_9337#2 ACTGGTCCGACGCGGAACGGTCCACTATTGAGATATAT--AGTTTGCAGACCCGGCATCG 467 consensus_9337#3 CCCGAGGTAGTGCTGAATGATCGAACGATGCCGGGTCTGCAAACTATATATCTCAATAGT 359 consensus_9337#0 GCCTGCATCCCGGCCGACCTGGTGTGCGACGGCGT-CCAGCACTGTCTGGACGGGTCGGA 764 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 GGGGCCCGCGCGATGAAACCGTACCGCGGCACCGTGCTGGTTGGGGCGGCACGCGGGCGC 753 consensus_9337#2 TTCGATCATTCAGCACTACC--TCGGGGACGATGCGCCGGTCGCACTCGCGCTCATCCCC 525 consensus_9337#3 GGACCGTTCCGCGTCGGACCAGTACAGCGTGTTGC-TTAGGTAGTCGAAAGCGAGTTCTG 418 consensus_9337#0 CGAAACGATCGGCTGCATCGACATCGCAGGGAAGTGCAAGGGCTTCCTGTGCCGCAACAA 824 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 ACAAACGACAGACGGTGCCGACGACGAAGGGGCCGGC--TGGCTGGCCGGCCTGCTGCAC 811 consensus_9337#2 GAGACGGGCAAGATGT-TCGTGGCGCTCCGGTCGCCCTCCGGCCACACGCACATCGACCG 584 consensus_9337#3 TTATCCGGCCGATGCCGCTCCGGACCAGCCGCTGGGTGCGGACGACCCGAGCTCGACCGT 478 consensus_9337#0 GCACTGCCTGCAGTCGCACCACTGGGTGTGCGA--CGGGCTGGACGACTGTGGCGACGGC 882 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 GTGCTGCTGTACGTGACGCTCGTGGGTGCGACGATCGGGGCCGGGTGGTACGTCTATCGC 871 consensus_9337#2 GCAGGACATGAC-CGGCCGTGGTCCGCACA------------------------------ 613 consensus_9337#3 GTAGATCGCCCTCCTACTCACTGGGGTCTCATCGC------------------------- 513 consensus_9337#0 TCGGACGAGGAGCACTGCCTGAGCGAGTGTACGCTCGAGCACGGGAAGTACGAGTGCGCG 942 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 CAGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACG 931 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 AACAACCACACCTGCGTGGACGTGACGCAGGTGTGCAACGGGGCGGACGATTGCGGCGAC 1002 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 AGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGA----GGGAAGGAACGTGCTCACGCT 987 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 GGCAGCGACGAGGGCCCGGGCTG-TAAGGTGCCGGCGGACGGTTGCAAGGCGCTGCACTG 1061 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 GGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAA 1047 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 CGCGCCGCAGACGTGCAAGGTGCTGCCGGACGGGAAGCCGGTCTGCCTGTGCGGCGTCGG 1121 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 CGGGCCG--GACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGC 1105 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 CTTCCGGTTCGAGCCGAGCGCGGGCCGGTGCGTGGACGTGAACGAGTGCGCCCG-GTACG 1180 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 GACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATG 1165 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 GGCTGTGCTCGCAGGGCTGCATCAACACGCCCGGCTCGTTCCGCTGCACCTGCATCGACC 1240 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 CACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACC 1225 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 A--GTTCCACCTGATGCGGGACGGGCGCACGTGCGAGCTGTCGTCCGGAACGGAGGCGCT 1298 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 CTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACT 1285 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 GATGCTGTACACCACCCAGAAGGCTGTCGGTGCGATGTACCTGACCTCGCTGCACCAGTA 1358 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 T-TCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGT 1344 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 CTACGTCGCGAAGGAGCTGTCGCAGGTGATCGGCGTGGCGTACGACGGCAGCCACGTGTA 1418 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 GCTGGGAACCGAGTGGATGTAGCTAGATTTAAACAAAAAAAAAAAAAAAACGGACGCGTG 1404 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 CTGGACGGACATCTCGCACAAGACGGAGTCCGATCGAGCGGTCGCTGGAGGACGGCAGCG 1478 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 GGCGG------------------------------------------------------- 1409 consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 ACCGGGTGCAGCTGCTCACCGCCGGCCTGATCTCGCCCGAGGACATCGCGCTCGACTGGC 1538 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 ------------------------------------------------------------ consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 TGACCGGGAACATCTACTTCAGCGACAGCGGCCAGATGGCACATTGCCGTCTGCTCGAGC 1598 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 ------------------------------------------------------------ consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 GACGGCTACCACTTGCCGGGCGATCGTGCAGGACGAGCTGCACAAGCCCGCGCGGGATCG 1658 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 ------------------------------------------------------------ consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 CGCTGCTGCCGCAAAACGGTACGCTGTTCTACAGCGACTGGGGCAACAACGCGATGATCG 1718 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 ------------------------------------------------------------ consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 GGCGGGGCCCCGGATGGACGGTACCGAGCAGCAGGTCGTCGTCAGCGACGGCATCCACTT 1778 consensus_9337#4 ------------------------------------------------------------ consensus_9337#1 ------------------------------------------------------------ consensus_9337#2 ------------------------------------------------------------ consensus_9337#3 ------------------------------------------------------------ consensus_9337#0 GGCCGAACGGGCTGACGCTCGACTGGCCCAACC 1811 consensus_9337#4 --------------------------------- consensus_9337#1 --------------------------------- consensus_9337#2 --------------------------------- consensus_9337#3 --------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||