These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9360#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1176 fasta sequence [CAATATGCTCAAGCAGAATCCGAGGTTATCAGCTGAGTACTCCGAGAAGCTTCAGCACGGTACTCATCTGGACCAGCATTTTCACGCTGGCTTTTCGCTGCTTTACTCACTGTGGTTCTGGTGGTACACGCCTCCGAGCGGGCGAGGTGCGCTCTACCGGCTCACGGCGGCGGTGGCGACTGTTACAGCTGGTCTATACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGTGGGCATGGTACTGACCGTGCTTGGGNGCTCGCTTTCATACGCCCTACCGCTGGCTCAGGTTGCGTTCGATTATTCGCCGCCAAAAGCAGCNGCCCGTGNGTGCCCCTTGAACTGACAAACTACTCGACTTACCAACCGGTGACAAACCCGTGCCTGTTGGCTNATTCGTACCGCGACCTTGCTACATACAAAGCAACGCAGCGTATCATAAGTGGNNCCACGAANCAATCACTANCCGATGGGGTCNGGTGACACGGGGTTCCAGGCTTAATCCGTTGGGTTTATATTCCAATTTTCATTCCCCAGGGAATTCCAAACCAAGGCCANGNTAGGGTGGGGTTGAACGACACGAAACACANGCNCCTTGGTTAAAGTTCCCCCTGGACGAGNGACAGCAAAGAGGGGNGTAATGGNTNACAGAGAAAAAATCCCCCNTCTATACAACAAGGGAGGGGACTCCTNTGCCTTNGAGGGGNTNGGGCCGAAGCNACAANGCCGGAAAACTGGTNGCCAANCTTCGGCGCTGACAAACAGAATGCNTACGGGGNCATTCGTTAACCNNGCGACACCACACAACCCCACCCNNCGCCNCNCCACAATGGGCCAGCCCCACACCNACTGAANCNTGCTNCGCCGTNACAACGCGNCCTGGCCTATCTNCANATCCNCCCACAGCATCATCGCACNCNTGGTCCACCCNATCACAAACCACTCTCGGGACCCCAGGGCNCGCNACGGCATGGAACCACCNTTAACCGGCTACCCCACNTAGCGGNGCCCNCANGNGNAGCCAACANAACCAAANAATCTCACNACGACAGCCNCAATGCCCGTCNATACNACCCNAAGCATTCTGCAGTNAACCACACTNNANCAAGNANGAAGAGCAGGCTGCCGTCGCGTCANATTCCCATNTNGNCNCGANCTCCATCAA] [+] EMBL AL696487 [CAATATGCTCAAGCAGAATCCGAGGTTATCAGCTGAGTACTCCGAGAAGCTTCAGCACGGTACTCATCTGGACCAGCATTTTCACGCTGGCTTTTCGCTGCTTTACTCACTGTGGTTCTGGTGGTACACGCCTCCGAGCGGGCGAGGTGCGCTCTACCGGCTCACGGCGGCGGTGGCGACTGTTACAGCTGGTCTATACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGTGGGCATGGTACTGACCGTGCTTGGGNGCTCGCTTTCATACGCCCTACCGCTGGCTCAGGTTGCGTTCGATTATTCGCCGCCAAAAGCAGCNGCCCGTGNGTGCCCCTTGAACTGACAAACTACTCGACTTACCAACCGGTGACAAACCCGTGCCTGTTGGCTNATTCGTACCGCGACCTTGCTACATACAAAGCAACGCAGCGTATCATAAGTGGNNCCACGAANCAATCACTANCCGATGGGGTCNGGTGACACGGGGTTCCAGGCTTAATCCGTTGGGTTTATATTCCAATTTTCATTCCCCAGGGAATTCCAAACCAAGGCCANGNTAGGGTGGGGTTGAACGACACGAAACACANGCNCCTTGGTTAAAGTTCCCCCTGGACGAGNGACAGCAAAGAGGGGNGTAATGGNTNACAGAGAAAAAATCCCCCNTCTATACAACAAGGGAGGGGACTCCTNTGCCTTNGAGGGGNTNGGGCCGAAGCNACAANGCCGGAAAACTGGTNGCCAANCTTCGGCGCTGACAAACAGAATGCNTACGGGGNCATTCGTTAACCNNGCGACACCACACAACCCCACCCNNCGCCNCNCCACAATGGGCCAGCCCCACACCNACTGAANCNTGCTNCGCCGTNACAACGCGNCCTGGCCTATCTNCANATCCNCCCACAGCATCATCGCACNCNTGGTCCACCCNATCACAAACCACTCTCGGGACCCCAGGGCNCGCNACGGCATGGAACCACCNTTAACCGGCTACCCCACNTAGCGGNGCCCNCANGNGNAGCCAACANAACCAAANAATCTCACNACGACAGCCNCAATGCCCGTCNATACNACCCNAAGCATTCTGCAGTNAACCACACTNNANCAAGNANGAAGAGCAGGCTGCCGTCGCGTCANATTCCCATNTNGNCNCGANCTCCATCAA] consensusID : consensus_9360#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1112 fasta sequence [CCCCCGGTGGCGAGTCGAGAGGCTGCTACGTACGGTACGGTGCGTTCCCCGGTCGCTTGATACACCATGTTTACTACGCCGCTACTGGCCGGTCTAGAGGCGCACCGGGAACGGATCGGCCAGGCAGCGGGGCTACTGACGGTCGCCCAGTACCTGGCGGGATGGTTTATTTGTAGCGACATTAGGCGCCGCGGCACATCGGCCGGCGTTTCACCGCTTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTC-CGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTACTCACTGTGGTTCTGG-TGGTACACGCCTCCGAGCGGGCGAGGTGCGCTCTACC-GGCTCA-CGGC-GGCGGTGGCGACTGTTACAGCTGGTCTGTACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGCACTCGCTTTCATCGCCCTACCGCTGGCTCAGTTGCGTTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCCTGCCTGCAATACTCGCTTCCACCGGTGCAACCGT-G-CTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACAGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC-CAGCAGTGGTGGTGAGAAGAAAAAGCAATGATAATCCCCTGG-CGGGCCGAGTAGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATCTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTACAGATGGTTGTGCTACAGATGATGTGTTGGTGAAAAGGTGGTTGTTTATAGACAACTATTGTATCTGGCAGCTAACAAAATTTTGGGTTTTGGTTTTAGGATGAATTTTATAAAGGGTACAAGTGAGGCTCTAATGGCAGTAAACACACAAAAACGTTTTTAGAAAAGATACATTGACATTAAATACAAATAAAACATTCTGCCTTCC] [+] EMBL CNS08QE7 [CCCCCGGTGGCGAGTCGAGAGGCTGCTACGTACGGTACGGTGCGTTCCCCGGTCGCTTGATACACCATGTTTACTACGCCGCTACTGGCCGGTCTAGAGGCGCACCGGGAACGGATCGGCCAGGCAGCGGGGCTACTGACGGTCGCCCAGTACCTGGCGGGATGGTTTATTTGTAGCGACATTAGGCGCCGCGGCACATCGGCCGGCGTTTCACCGCTTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTC CGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTACTCACTGTGGTTCTGG TGGTACACGCCTCCGAGCGGGCGAGGTGCGCTCTACC GGCTCA CGGC GGCGGTGGCGACTGTTACAGCTGGTCTGTACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGCACTCGCTTTCATCGCCCTACCGCTGGCTCAGTTGCGTTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCCTGCCTGCAATACTCGCTTCCACCGGTGCAACCGT G CTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACAGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC CAGCAGTGGTGGTGAGAAGAAAAAGCAATGATAATCCCCTGG CGGGCCGAGTAGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATCTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTACAGATGGTTGTGCTACAGATGATGTGTTGGTGAAAAGGTGGTTGTTTATAGACAACTATTGTATCTGGCAGCTAACAAAATTTTGGGTTTTGGTTTTAGGATGAATTTTATAAAGGGTACAAGTGAGGCTCTAATGGCAGTGAACACAC AAAACGTTTTTAGAAA ] [+] EMBL CNS08P87 [ TGGCGA TCGAGA GCTGCTACGTACGGTACGGTGCGTTCCCCGGTCGCTTGAAACACCATGTTTACTACGCCGCTACTGGCCGGTCTAGAGGCGCACCGGGAACGGATCGGCCAGGCAGCGGGGCTACTGACGTTCG ACAGTACCTGGCGGGATGGTTTATATGTAGCGACATTAGGCGCCGCGGCACATCGGCCGGCGTTTCACCGCTTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTCACGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTACTCACTGTGGTTCTGGATGGTACACGCCTCCGAGCGGGCGAGGTGCGCTCTACC GGCTCA CGGC ] [+] EMBL CNS097XW [ GCGAGTCGAGAGGCTGCTACGTACAGTACGGTGCGTTCCCCGGTCGGTTGAAACACCATGTTTACTACACCGCTACTGGCCGGTCTAGAAGCGCACCGGGAACGGATCGGCCAAGCAGCGGGGCTACTGACGGTCGCCCAGTACCTGGCGGGATGGTTTATTTGTAGCGACATTAGGCGCCGCGGCACATCGGCCGGCGTTTCACCGCTTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTC CGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTATTCACTGTGGTTCTGG TGGTACACGCCACCGAGCGGGCGAGGTGCACTCTACC GGTTCA CGGC GGCGGTGGCGACTGTTACAGCTGGTCTGTACGCGTATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGCACTCGCTTTCATCGCCCTACCGCTGGCTCAGTTGCGTTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCTTGCCTGCGATACTCGCTTCCACCGGTGCAA CGT GTCTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACGGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC CAGCAGTGGTGGTGAGAAGAAAAAGCAAAGATAATCCCCTGG CGGGCCGAGTGGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATGTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTTCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCT ] [+] EMBL CNS09CPD [ CGAGTCGAGAGGCTGCTACGTACAGTACGGTGCGTTCCCCGGTCGGTTGAAACACCATGTTTACTACACCGCTACTGGCCGGTCTAGAAGCGCACCAGGAACGGATCGGCCAAGCAGCGGGGCTACTGACGGTCGCCCAGTACCTGGCGGGATGGTTTATTTGTAGCGACATTAGGCGCCGCGGCACATCGGCCGGCGTTTCACCGCTTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTC CGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTATTCACTGTGGTTCTGG TGGTACACGCCACCGAGCGGGCGAGGTGCACTCTACC GGTTCA CGGC GGCGGTGGCGACTGTTACAGCTGGTCTGTACGCGTATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGCACTCGCTTTCATCGCCCTACCGCTGGCTCAGTTGCGTTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCTTGCCTGCGATACTCGCTTCCACCGGTGCAACCGT G CTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACGGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC CAGCAGTGGTGGTGAGAAGAAAAAGCAAAGATAATCCCCTGG CGGGCCGAGTGGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATGTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTAAAGATGGTTGTG ] [+] EMBL CNS08GCI [ AGTCGAGAGGCTGCTACGTACGGTACGGTGCGTTCCCCGGTCGCTTGATACACCATGTTTACTACGCCGCTACTGGCCGGTCTAGAGGCGCACCGGGAACGGATCGGCCAGGCAGCGGGGCTACTGACGGTCGCCCAGTACCTGGCGGGATGGTTTATTTGTAGCGACATTAGGCGCCGCGGCACATCGGCCGGCGTTTCACCGCTTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTC CGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTACTCACTGTGGTTCTGG TGGTACACGCCTCCGAGCGGGCGAGGTGCGCTTTACCGGGCTCACCGGCGGGCGGTGGg ] [+] EMBL CNS08ROB [ CGAGAGGCTGCTACGTACGGTACGGTGCGTTCCCCGGTCGCTTGATACACCATGTTTACTACGCCGCTACTGGCCGGTCTAGAGGCGCACCGGGAACGGATCGGCCAGGCAGCGGGGCTACTGACGGTCGCCCAGTACCTGGCGGGATGGTTTATTTGTAGCGACATTAGGCGCCGCGGCACATCGGCCGGCGTTTCACCGCTTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTC CGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTACTCACTGTGGTTCTGG TGGTACACGCCTCCGAGCGGGCGAGGTGCGCTCTACC GGCTCA CGGC GGCGGTGGCGACTGTTACAGCTGGTCTGTACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGCACTCGCTTTCATCGCCCTACCGCTGGCTCAGTTGCGCTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCCTGCCTGCAATACTCGCTTCCACCGGTGCAACCGT G CTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACAGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC CAGCAGTGGTGGTGAGAAGAAAAAGCAATGATAATCCCCTGG CGGGCCGAGTAGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATCTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTACAGATGGTTGTGCTACAGATGATGTGTTGGTGAAAAGGTGGTTGTTTATAGACAACTATTGTATCTGGCGGCTAAC AAATTTTGGG TTTGGTTTTAGGATGAATTTTATAAAGGGTA ] [+] EMBL CNS08G2C [ CCCGGTCGCTTGATACACCATGTTTACTACGCCGCTACTGGCCGGTCTAGAGGCGCACCGGGAACGGATCGGCCAGGCAGCGGGGCTACTGACGGTCGCCCAGTACCTGGCGGGATGGTTTATTTGTAGCGACATTAGGCGCCGCGGCACATCGGCCGGCGTTTCACCGCTTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTC CGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTACTCACTGTGGTTCTGG TGGTACACGCCTCCGAGCGGGCGAGGTGCGCTCTACC GGCTCA CGGC GGCGGTGGCGACTGTTACAGCTGGTCTGTACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGCACTCGCTTTCATCGCCCTACCGCTGGCTCAGTTGCGTTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCCTGCCTGCAATACTCGCTTCCACCGGTGCAA CGTGG CTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACAGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC CAGCAGTGGTGGTGAGAAGAAAAAGCAATGATAATCCCCTGG CGGGCCGAGTAGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATCTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTAC ] [-] EMBL CNS08QE8 [ GCACCGGGAACGGATCGGCCAGGCAGCGGGGCTACTGACGGTCGCCCAGTACCTGGCGGGATGGTTTATTTGTAGCGACATTAGGCGCCGCGGCACATCGGCCGGCGTTTCAACCCTTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTC CGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTACTCACTGTGGTTCTGG TGGTACACGCCTCCGAGCGGGCGAGGTGCGCTCTACC GGCTCA CGGC GGCGGTGGCGACTGTTACAGCTGGTCTGTACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGGACTCGCTTTCATCGCCCTACCGCTGGCTCAGTTGCGTTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCCTGCCTGCAAAACTCGCTTCCACCGGTGCAACCGT G CTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACAGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC CAGCAGTGGTGGTGAGAAGAAAAAGCAATGATAAT CCCTGG CGGGCCGAGTAGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATCTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTACAGATGGTTGTGCTACAGATGATGTGTTGGTGAAAAGGTGGTTGTTTATAGACAACTATTGTATCTGGCAGCTAACAAAATTTTGGGTTTTGGTTTTAGGATGAATTTTATAAAGGGTACAAGTGAGGCTCTAATGGCAGTAAACACACAAAAACGTTTTTAGAAAAGATACATTGACATTAAATACAAATAAAACATTCTGCCTT ] [-] EMBL CNS08ROC [ GCGGCACATCGGCCGGCGTTTC CAACCTCGCTTCATCGGTGGCTGTGGACTCTCCATCCTTCAGCTGCAGTACTC CGAGAAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTAACTAACTGTGGTTCTGG TGGTACACGCCTCCGAGCGGGCGAGGTGCGCTCTACC GGCTCA CGGC GGCGGTGGCAACTGTTACAGCTGGTCTGTACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGAACTCGCTTTCATCGCCCTACCGCTGGCTCAGTTGCGCTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCCTGCCTGCAAAACTCGCTTCCACCGGTGCAACCGT G CTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACAGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC CAGCAGTGGTGGTGAGAAGAAAAAGCAATGATAAT CCCTGG CGGGCCGAGTAGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATCTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTACAGATGGTTGTGCTACAGATGATGTGTTGGTGAAAAGGTGGTTGTTTATAGACAACTATTGTTTCTGGCGGCTAACAAAATTTTGGGTTTTGGTTTTAGGATGAATTTTATAAAGGGTACAAGTGAGGCTCTAATGGCAGTAAACACACAAAAACGTTTTTAGAAAAGATACATTGACATTAAATACAAATAAAACATTCTGCCTGCC] [-] EMBL CNS097XX [ caaaGCTTCGCTTCATCGGTGGCTGTGAACTCTCCATCCTTCAGCTGCAGTACTC CGAGAAGCTTCAAGCACCGGAACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTTATTCACTGTGGTTCTGG TGGTACACGCCACCGAGCGGGCGAGGTGCACTCTACC GGTTCA CGGC GGCGGTGGCGACTGTAACAGCTGGTCTGTACGCGTATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGAACTCGCTTTCATCGCCCTACCGCTGGCTTAGTTGCGTTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCTTGCCTGCGAAACTCGCTTCCACCGGTGCAACCGT G CTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACGGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCACACAGCAGTGGTGGTGAGAAGAAAAAGCAAAGATAAT CCCTGG CGGGCCGAGTGGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATGTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTACAGATGGTTGTGCTACAGATGATGTGTTGGTGAAAGGGTGGTTGTTTATAGACAACTATTGTATCTGGCAGCTAACAAAATTTTGGTTTTTGGTTTTAGGTTGAATTTTATAAAGGGTACAAGTGAGGCTCTAATGGCAGTAAACACACAAAAACGTTTTTAGAAAAGATAGATTGACATTAAATACAAATAA ] [-] EMBL CNS08G2D [ AAGCTTCAAGCACCGGCACTCATCTGGACCAGCATTTTCACGCTGGCCTTTTCGCTGCTTAACTAACTGTGGTTCTGG TGGTACACGCCTCCGGGCGGGCGAGGTGCGCTCTACC GGCTCA CGGC GGCGGTGGCGACTGTTACAGCTGGTCTGTACGCTTTTGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTACTGACCGTGCTGGAACTCGCTTTCATCGCCCTACCGCTGGCTAAGTTGCGTTCGATTATTCGCGCCAAAAGCAGCGCCGGGCTGCCCCTGCCTGCAAAACTCGCTTCCACCGGTGCAACCGT G CTGTGGCTTTTGTACGGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACAGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC CAGCAGTGGTGGTGAGAAGAAAAAGCAATGATAAT CCCTGG CGGGCCGAGTAGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATCTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATGAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTACAGATGGTTGTGCTACAGATGATGTGTTGGTGAAAAGGTGGTTGTTTATAGACAACTATTGTTTCTGGCAGCTAACAAAATTTTGGGTTTTGGTTTTAGGATGAATTTTATAAAGGGTA ] [+] EMBL CNS08RLQ [ GGACTGCTCATCAACAACACGTTCATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACAGTTCATCTATCGTTGTTTATCATTTATCCAGCATCCA ] [-] EMBL CNS09CPE [ aTGTGAACGGTTCAGCTATCGTTGTTTATCATTTATCCAGCATCCAC CAGCAGTGGTGGTGAGAAGAAAAAGCAAAGATAAT CCCTGG CGGGCCGAGTGGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATGTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTACAGATGGTTGTGCTACAGATGATGTGTTGGTGAAAGGGTGGTTGTTTATAGACAACTATTGTATCTGGCAGCTAACAAAATTTTGGTTTTTGGTTTTAGGTTGAATTTTATAAAGGGTACAAGTGAGGCTCTAATGGCAGTAAACACACAAAAACGTTTTTAGAAAAGATAGATTGACATTAAATACAAA ] [-] EMBL CNS08GCJ [ GTTGTTTATCATTTATCCAGCATCCCC CAGCAGTGGTGGTGAGAAGAAAAAGCAATGATAATCCCCTGGCCGGGCCGAGTAGGTTTGGTAGAAAAATCCCTTTTCGAAGGAGGGATCTTGCTGAGGGTTGCGAGGAAGCGGAAAAGCTGTCCAACTGGCTGGACTACGATGATAAGGCGCATCGTGTACGCGAAACGAAATCAGCGTTTGCTACAGATGGTTGTGCTACAGATGATGTGTTGGTGAAAAGGTGGTTGTTTATAGACAACTATTGTTTCTGGCAGCTAACAAAATTTTGGGTTTTGGTTTTAGGATGAATTTTATAAAGGGTACAAGTGAGGCTCTAATGGCAGTAAACACACAAAAACGTTTTTAGAAAAGATACATTGACATTAAATACAAATAAAACATTCT ] consensusID : consensus_9360#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 369 fasta sequence [TTTTTTTTTTTACTTCCATTAAACCCTCACTTTTACCCTTTATAAAATTCATCCTAAAACCAAAACCCAAAATTTTTTTATCTTCCATATACAATATTTTTCTATAAACAACCACCTTTTCACCAACACATCATCTTTATCACAACCATCTTTATCAAACCCTTATTTCTTTTCCCTTACACCATTCCCCTTATCATCTTATTCCAACCATTTGGACAACTTTTCCCCTTCCTCCCAACCCTCAACAAAATCCCTCCTTCCAAAAGGGATTTTTCTACCAAACCTACTCGGCCCGCCAGGGATTATCATTTCTTTTTCTTCTCACCACCACTGCTGGTGGATTCTGGATAAATGATAAACAACGATAGC] [+] EMBL CNS08RLR [TTTTTTTTTTTACTTCCATTAAACCCTCACTTTTACCCTTTATAAAATTCATCCTAAAACCAAAACCCAAAATTTTTTTATCTTCCATATACAATATTTTTCTATAAACAACCACCTTTTCACCAACACATCATCTTTATCACAACCATCTTTATCAAACCCTTATTTCTTTTCCCTTACACCATTCCCCTTATCATCTTATTCCAACCATTTGGACAACTTTTCCCCTTCCTCCCAACCCTCAACAAAATCCCTCCTTCCAAAAGGGATTTTTCTACCAAACCTACTCGGCCCGCCAGGGATTATCATTTCTTTTTCTTCTCACCACCACTGCTGGTGGATTCTGGATAAATGATAAACAACGATAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9360#0 ------------------------------------------------------------ consensus_9360#1 CCCCCGGTGGCGAGTCGAGAGGCTGCTACGTACGGTACGGTGCGTTCCCCGGTCGCTTGA 60 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 ------------------------------------------------------------ consensus_9360#1 TACACCATGTTTACTACGCCGCTACTGGCCGGTCTAGAGGCGCACCGGGAACGGATCGGC 120 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 ------------------------------------------------------------ consensus_9360#1 CAGGCAGCGGGGCTACTGACGGTCGCCCAGTACCTGGCGGGATGGTTTATTTGTAGCGAC 180 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 -------------------------------------------CAATATGCTCAAGCAGA 17 consensus_9360#1 ATTAGGCGCCGCGGCACATCGGCCGGCGTTTCACCGCTTCGCTTCATCGGTGGCTGTGGA 240 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 ATCCGAGGTTATCAGCTG-AGTACTCCGAGAAGCTTCA-GCAC-GGTACTCATCTGGACC 74 consensus_9360#1 CTCTCCATCCTTCAGCTGCAGTACTCCGAGAAGCTTCAAGCACCGGCACTCATCTGGACC 300 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 AGCATTTTCACGCTGGC-TTTTCGCTGCTTTACTCACTGTGGTTCTGGTGGTACACGCCT 133 consensus_9360#1 AGCATTTTCACGCTGGCCTTTTCGCTGCTTTACTCACTGTGGTTCTGGTGGTACACGCCT 360 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 CCGAGCGGGCGAGGTGCGCTCTACCGGCTCACGGCGGCGGTGGCGACTGTTACAGCTGGT 193 consensus_9360#1 CCGAGCGGGCGAGGTGCGCTCTACCGGCTCACGGCGGCGGTGGCGACTGTTACAGCTGGT 420 consensus_9360#2 -------------------TTTTTTTTTTTACTTCCATTA----AACCCTCACTTTTACC 37 * * * ** * ** * ** * consensus_9360#0 CTATACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGG-TGGGCATGGTA 252 consensus_9360#1 CTGTACGCATATGGCGCCCAGGGCGATGGTCCCGACGTGATGTACCGGCTGGGCATGGTA 480 consensus_9360#2 CTTTATAAA-ATTCATCCTAAAACCAAAACCCAAAATTTTTTTATCTTCCATATACAATA 96 ** ** * ** ** * * * ** * * * ** * * ** consensus_9360#0 CTGACCGTGCTTGGGNGCTCGCTTTCATACGCCCTACCGCTGGCTCAGGTTGCGTTCGAT 312 consensus_9360#1 CTGACCGTGCT--GGCACTCGCTTTCAT-CGCCCTACCGCTGGCTCAG-TTGCGTTCGAT 536 consensus_9360#2 TTTTTC-TATA--AACAACCACCTTTTC-------ACCAACACATCATCTTTATCACAAC 146 * * * * * ** *** *** ** * * consensus_9360#0 TATTCGCCGCCAAAAGCAGCNGCCCGTGNGTGCCCCTTGAACTGACAAACTACTCGACTT 372 consensus_9360#1 TATTCGC-GCCAAAAGCAGCG--CCG-GGCTGCCCCT---GCCTGCAA--TACTCGCTT- 586 consensus_9360#2 CATCTTT-ATCAAACCCTTATTTCTT----TTCCCTTACACCATTCCCCTTATCATCTTA 201 ** **** * * * *** * * * ** * consensus_9360#0 ACCAACCGGTG--ACAAACCCGTGCCTGTTGGCTNATTCGTACCGCGACCTTGCTACATA 430 consensus_9360#1 --CCACCGGTGCAACCGTGCTGTGGCTTTTGTACGGACTGCTCATCAAC---AACACGTT 641 consensus_9360#2 TTCCAACCATTTGGACAACTTTTCCCCTTCCTCCCAACC-CTCAACAAAATCCCTCCTTC 260 * * * * * * * * * * * * consensus_9360#0 CAAAGCAACGCAGCGTATCATAA--GTGGNNCCACGAANCAATCACTANCCGATGGGGTC 488 consensus_9360#1 CATAGTGGTCCAGAAAATCATAGCGATGGGTCTGTGCACAGTTCAGCTATCGTTGTTTAT 701 consensus_9360#2 CAAAAGGGATTTTTCTACCAAACCTACTCGGCCCGCCAGGGATTATCATTTCTTTTTCTT 320 ** * * ** * * * * * * consensus_9360#0 NGGTGACACGGGGTTCCAGGCTTAATCCGTTGGGTTTATATTCCAATTTTCATTCCCCAG 548 consensus_9360#1 CATTTATCCAGCATCCACCAGCAGTGGTGGTGAGAAGAAAAAGCAATGATAATCCCCTGG 761 consensus_9360#2 C--TCAC-CACCACTGCTGGTGGATTCTGGATAAATGATAAA-CAACGATAGC------- 369 * * * * * * *** * consensus_9360#0 GGAATTCCAAACCAAGGCCANGNTAGGGTGGGGTTGAACGACACGAAACACANGCNCCTT 608 consensus_9360#1 -------CGGGCCGAG--TAGGTTTGGTAGAAAAATCCCTTTTCGAAGG--AGGGATCTT 810 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 GGTTAAAGTTCCCCCTGGACGAGNGACAGCAAAGAGGGGNGTAATGGNTNACAGAGAAAA 668 consensus_9360#1 GCTGAGGGTTGCGA--GGAAGCGGAAAAGCTGTCCAACTGGC--TGGACTACGATGATAA 866 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 AATCCCCCNTCTATACAACAAGGGAGGGGACTCCTNTGCCTTNGAGGGGNTNGG-GCCGA 727 consensus_9360#1 GGCGCATCGTGTACGCGAAACGAAATCAG---CGTTTGCTACAGATGGTTGTGCTACAGA 923 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 AGCNACAANGCCGGAAAACTGGTNGCCAANCTTCGGCGCTGACAAACAGAATGCNTACGG 787 consensus_9360#1 TGATGTGTTGGTGAAAAGGTGGTTGTTTATAGACAACTATTGTATCTGGCA-GCTAACAA 982 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 GGNCATTCGTTAACCNNGCGACACCACACAACCCCACCCNNCGC-CNCNCCACAATGGGC 846 consensus_9360#1 AATTTTGGGTT---TTGGTTTTAGGATG-AATTTTATAAAGGGTACAAGTGAGGCTCTAA 1038 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 CAGCCCCACACCNACTGAANCNTGCTNCGCCGTNACAACGCGNCCTGGCCTATCTNCANA 906 consensus_9360#1 TGGCAGTAAACACACAAAAACGTTTTTAGAAAAGATACATTGACATTAAATACAAATAAA 1098 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 TCCNCCCACAGCATCATCGCACNCNTGGTCCACCCNATCACAAACCACTCTCGGGACCCC 966 consensus_9360#1 ACATTCTGCCTTCC---------------------------------------------- 1112 consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 AGGGCNCGCNACGGCATGGAACCACCNTTAACCGGCTACCCCACNTAGCGGNGCCCNCAN 1026 consensus_9360#1 ------------------------------------------------------------ consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 GNGNAGCCAACANAACCAAANAATCTCACNACGACAGCCNCAATGCCCGTCNATACNACC 1086 consensus_9360#1 ------------------------------------------------------------ consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 CNAAGCATTCTGCAGTNAACCACACTNNANCAAGNANGAAGAGCAGGCTGCCGTCGCGTC 1146 consensus_9360#1 ------------------------------------------------------------ consensus_9360#2 ------------------------------------------------------------ consensus_9360#0 ANATTCCCATNTNGNCNCGANCTCCATCAA 1176 consensus_9360#1 ------------------------------ consensus_9360#2 ------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||