These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9362#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1862 fasta sequence [CCGGTGTGTGTGTGTGTGCATGCTCGATGGTTGATAGTCCCATTCTTCCATCGTTTGGCTTCGTTTCATTACTAAAACACAACCGCCCGGTACGGACGCTGGTACGTGTGTGCCCTTGAAATCACACTGAAACTCTGAAATTTGGTGACATTCAGTGGATTTTTATTGCCCGTGGACAGACTGTTGCATCAACTTGTGCAAGAAGGACGTTG-----GTTCGC-AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG-GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC-GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCA-CT-CCATTACAACACCTCGCTGCCG-GTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTG-AAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCAC-CCCGCCGATGGGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCCACTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGATGCATTTCCGGCTGTAAGCGCAACGCGTTGAATGACCTGTCTGGTACATTGGTTTATTTTGCTCTTTGTTGTCCAACTTTTCGATATCGATCGAATAGGAATGAAGGGATGAGAGATTATACATCACGTTAGTATCGATCTAACCACTGCAAATCGATCTAATCCACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGATTTATCGTAAATGTTTAAACTAGCTTAAAGCTACATTCTAAATTGCATTCAAAATCAGTTGGTAAATAAACTATCAAATGCAACATGT-CAATATCGAA] [+] EMBL BM594899 [CCGGTGTGTGTGTGTGTGCATGCTCGATGGTTGATAGTCCCATTCTTCCATCGTTTGGCTTCGTTTCATTACTAAAACACAACCGCCCGGTACGGACGCTGGTACGTGTGTGCCCTTGAAATCACACTGAAACTCTGAAATTTGGTGACATTCAGTGGATTTTTATTGCCCGTGGACAGACTGTTGCATCAACTTGTGCAAGAAGAACGTTGTTTCTTTTCTCAAAACAAAAATGATGAAAGTGTTGTGTTACACCATTAAAACAGCAAATACTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGTGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTTGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTACTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGCAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAA ] [+] EMBL BM647838 [ ccggaTTGTGCAAGAAGGACGTTG GTTCGC AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCG ] [+] EMBL BX627771 [ aggGCAAGAAGGAAGTTG ATTCGC AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATACTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACTCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTACTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGCAACACCGTCCACACCAGTGGCGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTC ] [+] EMBL CNS096J4 [ AGGACGTTG GTTCGC AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCGTGTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGC GGGTTTGAGCTCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCA CTGCCATTACAACACCTCGCTGCCG GTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTG AAA CCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTA CGTTAAGTACGAACTGCTGCACGTCAC CCCGCCGATGGGTGCCCCGGATGTGCTGA ] [+] EMBL BM646550 [ ccgGTTG GTTCGC AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAAGTGCTGTACATTGCGGAGCACTATTTACGCAAGTCCAGAAAGC ] [+] EMBL BX628003 [ AAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAANGTGCTGTACATTGCGGAGCACTATTT ] [+] EMBL BX620170 [ CGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGCGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCAGCT CCATTACAACACCTCGCTGCCG GTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTA ] [+] EMBL CNS08YS8 [ TTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTTCATTGCGGA CACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCA CT CCATTACAACACCTCGCTGCCG GTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTG AAACCCGGCAC GATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGAAAAGTACGAGCTGCTGCACGTCAC CCCGCCGATGGGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCC ] [+] EMBL CNS0979A [ TGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCCAAAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACG CGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAG ACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCA CT CCATTACAACACCTCGCTGCCGCGTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTG AAA CCGGCAC GATGAAGCTGTGTACGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCAC CCCGCCGATGGGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAA TCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGCATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCG ] [-] EMBL CNS096J5 [ TCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAAT TGCGCACGAACCTAGTCGAGGTG AAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCAC CCCGCCGAT GGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACAATGTACCTCATGAAGAAGGATTTCATGCCCCCACTCCGCTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGATGCATTTCCGGCTGTAAGCGCAACGCGTTGAATGACCTGTCTGGTACATTGGTTTATTTTGCTCTTTGTTGTCCAACTTTTCGATATCGATCGAATAGGAATGAAGGGATGAGAGATTATACATCACGTTAGTATCGATCTAACCACTGCAAATCGATCTAATCCACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGATTTATCGTAAATGTTTAAACTAGCTTAAAGCTACATTCTAAATTGCATTCAAAATCAGTTGGTAAATAAACTATCAAATGCAACATGT CAATATCG ] [-] EMBL CNS08YS9 [ GCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTGAAAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCCC CCCCCCGAT GGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCATTTTCCGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCAACTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGATGCATTTCCGGCTGTAAGCGCAACGCGTTGAATGACCTGTCTGGTACATTGGTTTATTTTGCTCTTTGTTGTCCAGCTTTTCGATATCGATCGAATAGGAATGAAGGGATGAGAGATTATACATCACATTAGTATCGATCTAACCACTGCAAATCGATCTAATCCACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGATTTATCGTAAATGTTTAAACTAGCTTAAAGCTACATTCTAAATTGCATTCATAATCAGTTGGTAAATAAACTATCAAATGCAACATGTGCAATATCAAA] [-] EMBL CNS0979B [ aAATGTAAATCTGCGCACGAACCTAGTCGAGGTG AAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCACGCCCGCCGAT GGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAA TCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACAATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCTACTGGCATCTGCTGCTGAACGGTCTGTGGGATGGGCCGGGACTGATGCGAAAGTTGATGCATTTCCGGCTGTAAGCGCAACGCGTTGAATGACCTGTCTGGTACATTGGTTTATTTTGCTCTTTGCTGTCCAACTTTTCGATATCGATCGAATAGGAATGAAGGGATGAGAGATTATACATCACGTTAGTATCGATCTAACCACTGCAAATCGATCTAATCCACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGATTTATCGTAAATGTGGTAACTAGCTTAAAGCTACATTCTAAATTGCATTCAAAATCAGTTGGTAAATAAACTATCAAATGCAACATGTg ] consensusID : consensus_9362#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 819 fasta sequence [CCAAGAATCGGCACGNTGGAGGACGTTGGTTCGCAAACAAAAATGATAAAAGTGTTGTGTTATAC-AATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCGGTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCCGAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCCACTATTTACGCAAGTTCCAGAAAGCGCAAAAAATGCGCAGTCCATTACAAGANCTCGCTTGCACGGTTGCTGTACGGCGTTACAGNACTATGCCCGATGCGGCTTCTGGGAAATACGTGGAGAACGGGGCACATTTATTGTTACAATCTGGAGNCACG] [+] EMBL BX467151 [CCAAGAATCGGCACGNTGGAGGACGTTGGTTCGCAAACAAAAATGATAAAAGTGTTGTGTTATAC AATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCGGTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCCGAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCCACTATTTACGCAAGTTCCAGAAAGCGCAAAAAATGCGCAGTCCATTACAAGANCTCGCTTGCACGGTTGCTGTACGGCGTTACAGNACTATGCCCGATGCGGCTTCTGGGAAATACGTGGAGAACGGGGCACATTTATTGTTACAATCTGGAGNCACG] [+] EMBL AL930189 [ TAAAAGTGTTGTGTTATACAAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGAT ] consensusID : consensus_9362#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 535 fasta sequence [ATCCCCCGAGGTTACTGCTGCACGTTACCCGCCCATTGGTGCCCGGATGTGCTGAAGGCTTGCAAAGCCTATTACCGAGGTGGGCTTCGTAACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCTACTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGNATGCATTTCCCGCTGTAANCGCCACGCGTTGAATGACCTGGTCTGGTACATTGGTTTATT] [+] EMBL AL933454 [ATCCCCCGAGGTTACTGCTGCACGTTACCCGCCCATTGGTGCCCGGATGTGCTGAAGGCTTGCAAAGCCTATTACCGAGGTGGGCTTCGTAACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCTACTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGNATGCATTTCCCGCTGTAANCGCCACGCGTTGAATGACCTGGTCTGGTACATTGGTTTATT] consensusID : consensus_9362#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 518 fasta sequence [GGCAGGAATCGGCNCGAGGTTGAATCTGCGCACGAACCCGTACNTCGAGGTGAAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGGTACGAGCTGCTGCACGTCACCCCGCCGATGGGTGCCCCGGATGTGCTGAAGGGCTTGCAAAAGCCTAGGTTACCGAGGGTGGGCTATCGGTAGACGTGAACAAGGATACGCTGCAGGCATCAGAAATTCAGCAACGTCTTTGCGAGTCGGTGACATGCTCATCGTCTCGGCGCCGGAAAGCTCGTCTAACANAGACCAGGCCCAGGCGGGTTCCCGGATCAGGACACAGGGCGCCCAAGGGGTCNGGCGAGAAGGGTTNGCGATTGCTTACCAAAGAGGAGAGTTTTTTAANACGTGGGGNCATTTGTCTGGAGATAGGACGAAGCGNGGGCNCCAGGGCAAACGAACCNCGTAAAGAAGTTCGCGGANCAGGGTTTGTGAGACAGAGAACCAACGTAG] [+] EMBL BX468079 [GGCAGGAATCGGCNCGAGGTTGAATCTGCGCACGAACCCGTACNTCGAGGTGAAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGGTACGAGCTGCTGCACGTCACCCCGCCGATGGGTGCCCCGGATGTGCTGAAGGGCTTGCAAAAGCCTAGGTTACCGAGGGTGGGCTATCGGTAGACGTGAACAAGGATACGCTGCAGGCATCAGAAATTCAGCAACGTCTTTGCGAGTCGGTGACATGCTCATCGTCTCGGCGCCGGAAAGCTCGTCTAACANAGACCAGGCCCAGGCGGGTTCCCGGATCAGGACACAGGGCGCCCAAGGGGTCNGGCGAGAAGGGTTNGCGATTGCTTACCAAAGAGGAGAGTTTTTTAANACGTGGGGNCATTTGTCTGGAGATAGGACGAAGCGNGGGCNCCAGGGCAAACGAACCNCGTAAAGAAGTTCGCGGANCAGGGTTTGTGAGACAGAGAACCAACGTAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 CCGGTGTGTGTGTGTGTGCATGCTCGATGGTTGATAGTCCCATTCTTCCATCGTTTGGCT 60 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 TCGTTTCATTACTAAAACACAACCGCCCGGTACGGACGCTGGTACGTGTGTGCCCTTGAA 120 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 ATCACACTGAAACTCTGAAATTTGGTGACATTCAGTGGATTTTTATTGCCCGTGGACAGA 180 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 CTGTTGCATCAACTTGTGCAAGAAGGACGTTGGTTCGCAAACAAAAATGATAAAAGTGTT 240 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 GTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAAC 300 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 AAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGG 360 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 AGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCT 420 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 GGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCGGTGGCATTAA 480 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 AAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGAT 540 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 CAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGA 600 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 TACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAAT 660 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 TCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC 720 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTT 780 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 CACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGC 840 consensus_9362#1 ----------------------------------------CCAAGAATCGGCACGNTGGA 20 consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 GGAGCACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCACTCCATTACAACACCTCG 900 consensus_9362#1 GGACGTTGGTTCGCAAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAA 80 consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 CTGCCGGTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAA 960 consensus_9362#1 TTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCA 140 consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 CGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTGAAACCCGGCACGGATGAA 1020 consensus_9362#1 CAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGC 200 consensus_9362#2 ---------------------------------------ATCC-CCCGAGGTTACTGCTG 20 consensus_9362#3 --------------------------------GGCAGGAATCGGCNCGAGGTTGAATCTG 28 consensus_9362#0 GCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTG 1080 consensus_9362#1 ATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTA 260 * * * consensus_9362#2 CACGTTA--------CCCGCCCATTGGTGCCC-GGATGTGCTGAAGGCTTGC--AAAGCC 69 consensus_9362#3 CGCACGAA-------CCCGTACNTCGAGGT----GAAACCCGGCACGGATG---AAGCTG 74 consensus_9362#0 CACGTCAC-------CCCGCCGATGGGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCT 1133 consensus_9362#1 TCAGCCGATGTTCACCCTAATCGGCGGTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCC 320 ** * * * * * * * * consensus_9362#2 TATTACCGAGGTGGGCTTCGTAA-CGTGA-ACAAGGATACGCTGCAGCATCAGAAATTCA 127 consensus_9362#3 TGTTCGAAAATCTCGACAAGCCG-GACGA-GCGGTTTACCGTTAAGGTACGAGCTGCTGC 132 consensus_9362#0 AGTTACCGAGGTGGGCTTCGTAGACGTGA-ACAAGGATACGCTGCAGCATCAGAAATTCA 1192 consensus_9362#1 AATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGA 380 * * * * * * * * consensus_9362#2 GCAACGTCTTTGCGATCGGTGACT-GCTCATCTTCGCCGAATTCTAAAACAGCAGCGT-C 185 consensus_9362#3 ACGTCACCCCGCCGATGGGTGCCCCGGATGTGCTGAAGGGCTTGCAAAAGCCTAGGTTAC 192 consensus_9362#0 GCAACGTCTTTGCGATCGGTGACT-GCTCATCTTCGCCGAATTCTAAAACAGCAGCGT-C 1250 consensus_9362#1 GCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCT 440 * * * * * * * consensus_9362#2 CGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGC-- 243 consensus_9362#3 CGAGGGTGGGCTATCGGTAGACGTGAACAAGGATACGCTGCAGGCATCAGAAATTCAGCA 252 consensus_9362#0 CGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGC-- 1308 consensus_9362#1 CGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCC---- 496 ** * * * ** * * * ** * consensus_9362#2 ACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACG 303 consensus_9362#3 ACGTCTTTGCGAGTCGGTGACATGCTCATCGTCTCGGCGCCGGAAAGCTCGTCTAACANA 312 consensus_9362#0 ACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACG 1368 consensus_9362#1 -TGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCCG--AAGTATGTCGACCGTA 553 * * * * * ** *** * * * * * consensus_9362#2 TGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGA--AACTTTCCCGCTCGATC 361 consensus_9362#3 GAC---CAGGCCCAGGCGGGTTCCCGGATCAGGACACAGGG--CGC----CCAAGGGGTC 363 consensus_9362#0 TGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGA--AACTTTCCCGCTCGATC 1426 consensus_9362#1 CCTAC-CAGGCGCTGAAGAACTTCCGACCGGCAACGCCGTGTTCACCTTCCCGAACAGTC 612 * *** * * * * * * ** ** consensus_9362#2 AGCGCAAG-------GAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCG 414 consensus_9362#3 NG-GCGAG-------AAGGGTTNGCGATTGCTTACCAAAGAGGAGAGTTTTTTAANACG- 414 consensus_9362#0 AGCGCAAG-------GAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCG 1479 consensus_9362#1 CGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCCACTATTTACGC 672 * * ** ** * * * * * * consensus_9362#2 CTCTACTGGCATCTGCTGCTGA---ACGGTCTGTGGAATGGGCCGGGACTGATG-----C 466 consensus_9362#3 ---TGGGGNCATTTGTCTGGAG---ATAGGACGAAGCGNGGGCNCCAGGGCAAA-----C 463 consensus_9362#0 CTCCACTGGCATCTGCTGCTGA---ACGGTCTGTGGAATGGGCCGGGACTGATG-----C 1531 consensus_9362#1 AAGTTCCAGAAAGCGCAAAAAATGCGCAGTCCATTACAAGANCTCGCTTGCACGGTTGCT 732 * * * * * * consensus_9362#2 GAAAGTTGN-AT-GCA--TTTCCCGCTGTAANCGCCACGCGTTGAATGACCTGGTCTGGT 522 consensus_9362#3 GAACCNCGT-AAAGAA--GTTCGCGGANCAGGGTTTGTGAGACAGAGAACC-AACGTAG- 518 consensus_9362#0 GAAAGTTG---ATGCA--TTTCCGGCTGTAAGCGCAACGCGTTGAATGACC-TGTCTGGT 1585 consensus_9362#1 GTACGGCGTTACAGNACTATGCCCGATGCGGCTTCTGGGAAATACGTGGAG-AACGGGGC 791 * * * * * * * * * * consensus_9362#2 ACATTGGTTTATT----------------------------------------------- 535 consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 ACATTGGTTTATTTTGCTCTTTGTTGTCCAACTTTTCGATATCGATCGAATAGGAATGAA 1645 consensus_9362#1 ACATTTATTGTTACAATCTGGAGNCACG-------------------------------- 819 consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 GGGATGAGAGATTATACATCACGTTAGTATCGATCTAACCACTGCAAATCGATCTAATCC 1705 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 ACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGAT 1765 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------------------------------ consensus_9362#3 ------------------------------------------------------------ consensus_9362#0 TTATCGTAAATGTTTAAACTAGCTTAAAGCTACATTCTAAATTGCATTCAAAATCAGTTG 1825 consensus_9362#1 ------------------------------------------------------------ consensus_9362#2 ------------------------------------- consensus_9362#3 ------------------------------------- consensus_9362#0 GTAAATAAACTATCAAATGCAACATGTCAATATCGAA 1862 consensus_9362#1 ------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||