These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9364#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1569 fasta sequence [CCGCCCACGCGTCCGCCCCCGCTGAAAGGACGTGTCTGGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAG-AAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG-TGACGTCTTGGCTGAGCGGA------TTTTTTTTATTTGAAG--C--ACACACACACATA-CCCGCGTCGGTGGGCCTGG-TGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAG--GCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCCAGAAAGGAACCGAATCACCCATCCGAACATCCGAACTTCGGGCTTAGTGGTGTGACATTTTTGGTGCACATACGGTGATTAGTAGCTCATCCNGCACGCAGTGAAAGATTCTACGCGAAGCAGCAGCACAGGAGAGATACAGCAGCAACATGAATAACCTGATTGCGAAGGCCAACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCCAACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCAACGGATCACCATACCGTGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGAAAGGATAGTGGCGCCAGTTTGCTAGAACCAAAGGAGGTGCTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGCTGGAAACGATGCTCACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCCCGAAACTGCACGGCATCTTTCCGGGCGGCCGCATCGAACAGTACATACCGGCCCGGGCCCTGCTGACGGCGGAGCTGAGCGATGCAAAGATATCGATAAAGGTAGCGGAAAAGATGGCCGCCATCCACAGTA] [+] EMBL BM609627 [CCGCCCACGCGTCCGCCCACGCGTCCGGGACGTATCTGGTTCATTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACTTGTGTGTTAGGCACGCACCACCC ACAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGGTGAGTTTATTGTTCTCCATTTGCCGAA AGCGTACCATGCGGTGTACGGTAGAGAAGTGAATAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTATAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATTGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCTCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTGCGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGATT TTTTTTTTATTTGAAG C ACACACACACATA CCCGCGTCGGTGGGCCTGG ] [+] EMBL BM630995 [ CCGCTGAAAGGACGTGTCT GTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGAGACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTACCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCTTTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTATTTGAAGCAC ACACACACACATA CCCGCGTCGGTGGGCCTGG TGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCG ] [+] EMBL BM633101 [ CCGCTGAAAGGACGTGTTTGGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACTTGTGTGTTAGGTACGCACCACCCAG AAAAAAAACGTTGACTGCACAAAGTGTATGCAAGTTTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAA AGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATTGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTG ] [+] EMBL CNS08UO5 [ CTGGAAGGACGTATCTGGTTCGTTCGGTGCTCTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATAATTCTTAACTAAACCTGTGTGTTAGGTACGCACTACCCAGAAG AAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAG ATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAGTTGACGTCTTGGCTGAGCGGATTTT TTTTTTTTATTTGAAG CATACACACACACATA CCCGCGTCGGTGGGCCTGG TGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCG ] [+] EMBL BM591664 [ ccgGAAAGGACGTGTTTGGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACTTGTGTGTTAGGTACGCACCACCCAG AAAAAAAACGTTGACTGCACAAAGTGTATGCAAGTTTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAA AGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATTGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGTATTTTTTTTTTTTTTATTTGAAG C ACACACACACATACCCCGCGTCGGTGGGCCT ] [+] EMBL BX627829 [ GTGTCT GTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAG AAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGACGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTT ] [+] EMBL BX624970 [ TGGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAG AAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCATCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGCACCGAGAACGGGCGACGCAA CGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTTATTTGAAG CACACACACATA CTCGCGTCGGTGGGCCTGG TGCTGCGCT ] [+] EMBL BM632974 [ ccgGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAG AAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGAGACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTACCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCTTTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTATTTGAAGCAC ACACACACACATACCCCGCGTCGGTGGGCCTGGCTGCTGTG ] [+] EMBL BM589521 [ ccgGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGAGACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTACCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCTTTCAACACCTTTCGAACCGGTACCGAGAACGGGCGACGCAACGCGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTATTTGAAGCAC ACACACACACATA CCCGCGTCGGTGGGCCTGG TGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAG GCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCC ] [+] EMBL BX627460 [ CATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCATCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGCACCGAGAACGGGCGACGCAA CGACGCTAG TGACGTCTTGGCTGAGCGGA TTTTTTTTATTTGAAG CACACACACATA CTCGCGTCGGTGGGCCTGG TGCTGCGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCCAGAAAGGAACCGAATCACCCATCCGAACATCCGAACTTCGGGCTTAGTGGTGTGACATTTTTGGTGCACATACGGTGATTAGTAGCTCATCCNGCACGCAGTGAAAGAT ] [-] EMBL CNS08UO6 [ gTGGTGCACATACGGTGATTAGTAGCTCATCCGGCACGCAGTGAAAGATTCTACGCGAAGCAGCAGCACAGGAGAGATACAGCAGCAACATGAATAACCTGATTGCGAAGGCCAACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCCAACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCAACGGATCACCATACCGTGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGAAAGGATAGTGGCGCCAGTTTGCTAGAACCAAAGGAGGTGCTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGCTGGAAACGATGCTCACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCCCGAAACTGCACGGCATCTTTCCGGGCGGCCGCATCGAACAGTACATACCGGCCCGGGCCCTGCTGACGGCGGAGCTGAGCGATGCAAAGATATCGATAAAGGTAGCGGAAAAGATGGCCGCCATCCACAGTA] consensusID : consensus_9364#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 828 fasta sequence [CCGGCTGAAAGGACGTGTCTGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGCACACACACACACACATACCCGCGTCGCTGGGCCTGGTGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCCAGAAAGGTATACCGAATCACCCATCCGAACATCCGAACTTCAGGCTTAGTGGNGTGACATTTTTGGNGCACATACGGNGATTAGTAG] [+] EMBL BM601697 [CCGGCTGAAAGGACGTGTCTGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAA ] [+] EMBL BX628634 [ TCTGTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAGTAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGCACACACACACACACATACCCGCGTCGCTGGGCCTGGTGCTGTGCTGTTACCACCGAATCGAAATCTCGCATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCAAGACCGGCCAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGTGCGCCAGAAAGGTATACCGAATCACCCATCCGAACATCCGAACTTCAGGCTTAGTGGNGTGACATTTTTGGNGCACATACGGNGATTAGTAG] [+] EMBL BX619920 [ GTTCGTTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATTGTTATTAAACGTTATCATTCTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATNCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTGTGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCT ] consensusID : consensus_9364#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 602 fasta sequence [CCGGGCCTGATAAAGTGTAAAGTGACTTGCAATTGTTAGGATTAGCATAGAAATATGTCAAGGAGATACACGATTGATTAGGTGTTCAGGAGCGGCTCAGTTTCCGGATACTTTGCCCAAGCAATCATCACCGTCTGAAGGATTTATAAAGCCAACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCCAACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCATCGGATCACCATACCGCGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGAAAGGATAGTGGCGCCAGTTTGCTAGAACCGAAGGAGGTACTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGCTGGAAACGATGCTTACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCCCGAAACTGCACGG] [+] EMBL BM616730 [CCGGGCCTGATAAAGTGTAAAGTGACTTGCAATTGTTAGGATTAGCATAGAAATATGTCAAGGAGATACACGATTGATTAGGTGTTCAGGAGCGGCTCAGTTTCCGGATACTTTGCCCAAGCAATCATCACCGTCTGAAGGATTTATAAAGCCAACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCCAACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCATCGGATCACCATACCGCGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGAAAGGATAGTGGCGCCAGTTTGCTAGAACCGAAGGAGGTACTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGCTGGAAACGATGCTTACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCCCGAAACTGCACGG] consensusID : consensus_9364#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence [ATCGCCGAGGNNGACGTGTTTGGTCGTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCATCGT] [+] EMBL AL930692 [ATCGCCGAGGNNGACGTGTTTGGTCGTCGGTGCACTCATTGTGTTTTTATTGTGTGTCTATGTTATTAAACGTTATCATTTTTAACTAAACCTGTGTGTTAGGTACGCACCACCCAGAAGAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAAGATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCGTAGCATGCGGTGTACGGTAGAGAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTCATCATTTTGCAAACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATGTAACCAAAGATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGTTGCTAATTGTTTAAACAAATTATAAATCGCCATCGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9364#1 -----------------CCGGCTGAAAGGACGTGT--CTGTT-CGTTCGGTGCACTCAT- 39 consensus_9364#3 ----------------ATCGCCGAGGNNGACGTGT--TTGGT-CGT-CGGTGCACTCAT- 39 consensus_9364#0 CCGCCCACGCGTCCGCCCCCGCTGAAAGGACGTGT--CTGGTTCGTTCGGTGCACTCAT- 57 consensus_9364#2 -----CCGGGCCTGATAAAGTGTAAAGTGACTTGCAATTGTTAGGATTAGCATAGAAATA 55 *** ** ** * * * * ** consensus_9364#1 TGTGTTTTTATTGTGTGTCTA--TTGTTATTAAACGTTATCATTCTTAACTAAACCTGTG 97 consensus_9364#3 TGTGTTTTTATTGTGTGTCTA--T-GTTATTAAACGTTATCATTTTTAACTAAACCTGTG 96 consensus_9364#0 TGTGTTTTTATTGTGTGTCTA--TTGTTATTAAACGTTATCATTCTTAACTAAACCTGTG 115 consensus_9364#2 TGTCAAGGAGATACACGATTGATTAGGTGTTCAGGAGCGGCTCAGTTTCCGGATACTTTG 115 *** * * * * * * ** * * ** * * ** ** consensus_9364#1 TGTTAGGTACGCACCACC--CAGAAGAAAAAAAAA-GTTGACTGCACAAAGTGTATGCAA 154 consensus_9364#3 TGTTAGGTACGCACCACC--CAGAAGAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAA 154 consensus_9364#0 TGTTAGGTACGCACCACC--CAGAAGAAAAAAAAAAGTTGACTGCACAAAGTGTATGCAA 173 consensus_9364#2 C-CCAAGCAATCATCACCGTCTGAAGGATTTATAAAGCCAACTCTCCCACGGAGATGCGG 174 * * * ** **** * **** * * ** * *** * * * **** consensus_9364#1 GATTTCCGTAAAGTTGAGTTTATTGTTCTCCGTTTGCCGAAAGCTGCTGAGCG-TAGCAT 213 consensus_9364#3 GATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCG-TAGCAT 213 consensus_9364#0 GATTTCCGTAAAGTTGAGTTCATTGTTCTCCATTTGCCGAAAGCTGCTCAGCG-TAGCAT 232 consensus_9364#2 GACATTGC--GGCTCGTATCTGTCGGGACTATCTGACCGGTGCCTGGAAGACGATATCGG 232 ** * * * * * * * *** *** ** ** * consensus_9364#1 GCGGTGTACGGTAGA-GAAGTGAAAAGCAAACAAAACGAAACATCTGCATCAGCTGGGTC 272 consensus_9364#3 GCGGTGTACGGTAGA-GAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTC 272 consensus_9364#0 GCGGTGTACGGTAGA-GAAGTGAAAAGCAAACAACACGAAACATCTGCATCAGCTGGGTC 291 consensus_9364#2 CCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGG-ACTCTCCAACTTCCTCTACTACGTC 291 ** * * * ** **** * * ** ** ** * ** ** *** consensus_9364#1 ATCATTTTGCA--AACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATG 330 consensus_9364#3 ATCATTTTGCA--AACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATG 330 consensus_9364#0 ATCATTTTGCA--AACAGACACGCGTAACCAAACGCTTAGAGCACGTTTCTTGTGGAATG 349 consensus_9364#2 AGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAACAACAACAATGGTGGCAAG 351 * * * * * * ** ** * *** * * ** * **** * * consensus_9364#1 TAACCAAA----GATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGT----TGCTAATT 382 consensus_9364#3 TAACCAAA----GATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGT----TGCTAATT 382 consensus_9364#0 TAACCAAA----GATTCGGTTGGAGATTGGTGAATTTTAAGTTATCGT----TGCTAATT 401 consensus_9364#2 AAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCATCGGATCACCATACCGCGACAAAG 411 ** * * * ** *** * ** * * * * * * ** consensus_9364#1 GTTTAAACAAAT-TATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTG 441 consensus_9364#3 GTTTAAACAAAT-TATAAATCGCCATCGT------------------------------- 410 consensus_9364#0 GTTTAAACAAAT-TATAAATCGCCGTCGTAGATTCGCGTGCGTGAGTGAGTGCGTGAGTG 460 consensus_9364#2 ACGGCAACAAAGGCACGAAATGGAA--GCAAGCGGGCACGAAAGGATAGTGGCGCCAGTT 469 ****** * ** * * consensus_9364#1 TGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAG 501 consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 TGATAGATTCCCTGCAGTACGCTTCACGTAGCGCTGTTTCTATTTTTACTTTTCGTGAAG 520 consensus_9364#2 TGCTAGAACCGAAGGAGGTACTGCTAAGAATTTACGGTCAAACGCACGGGGAACATGCGC 529 consensus_9364#1 TAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGC-------------- 547 consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 TAAAGAAAAGGGCTAGAAGAAAACCATTCAACACCTTTCGAACCGGTACCGAGAACGGGC 580 consensus_9364#2 TGGAAACGATGCTTACCGAATCGGTCGTGTTTACGCTGCTGAGCGAGCGCAAGCTTGGCC 589 consensus_9364#1 ---------------------------------------------------ACACACACA 556 consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 GACGCAACGCGACGCTAGTGACGTCTTGGCTGAGCGGATTTTTTTTATTTGAAGCACACA 640 consensus_9364#2 CGAAACTGCACGG----------------------------------------------- 602 consensus_9364#1 CACACATACCCGCGTCGCTGGGCCTGGTGCTGTGCTGTTACCACCGAATCGAAATCTCGC 616 consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 CACACATACCCGCGTCGGTGGGCCTGGTGCTGTGCTGTTACCACCGAATCGAAATCTCGC 700 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCAAGACCGGC 676 consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 ATCCCGTTATCAGCGAGGTTGGACGGCATCGACCGAAAGGCGCGCGCGCGCAAGACCGGC 760 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 CAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGT 736 consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 CAGTACCCACAAAGTCCAAAAATCATCCCCACGTCCAGAGGGGTGCCTGCTTATCAGCGT 820 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 GCGCCAGAAAGGTATACCGAATCACCCATCCGAACATCCGAACTTCAGGCTTAGTGGNGT 796 consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 GCGCCAGAAAGGAA--CCGAATCACCCATCCGAACATCCGAACTTCGGGCTTAGTGGTGT 878 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 GACATTTTTGGNGCACATACGGNGATTAGTAG---------------------------- 828 consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 GACATTTTTGGTGCACATACGGTGATTAGTAGCTCATCCNGCACGCAGTGAAAGATTCTA 938 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 CGCGAAGCAGCAGCACAGGAGAGATACAGCAGCAACATGAATAACCTGATTGCGAAGGCC 998 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 AACTCTCCCACGGAGATGCGGGACATTGCGGCTCGTATCTGTCGGGACTATCTGACCGGT 1058 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 GCCTGGAAGACGATATCGGCCGACGAGCTGCAGCTGAAGCGCATCAGCGGTGGACTCTCC 1118 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 AACTTCCTCTACTACGTCAGCCTGCCGGAGCATCATTATTACGGCAACAACAACAACAAC 1178 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 AACAACAACAATGGTGGCAAGAAATCGCATCCAAACTCACGGCGAGGCTCGTTCGCAACG 1238 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 GATCACCATACCGTGACAAAGACGGCAACAAAGGCACGAAATGGAAGCAAGCGGGCACGA 1298 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 AAGGATAGTGGCGCCAGTTTGCTAGAACCAAAGGAGGTGCTGCTAAGAATTTACGGTCAA 1358 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 ACGCACGGGGAACATGCGCTGGAAACGATGCTCACCGAATCGGTCGTGTTTACGCTGCTG 1418 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 AGCGAGCGCAAGCTTGGCCCGAAACTGCACGGCATCTTTCCGGGCGGCCGCATCGAACAG 1478 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------------------------------------ consensus_9364#3 ------------------------------------------------------------ consensus_9364#0 TACATACCGGCCCGGGCCCTGCTGACGGCGGAGCTGAGCGATGCAAAGATATCGATAAAG 1538 consensus_9364#2 ------------------------------------------------------------ consensus_9364#1 ------------------------------- consensus_9364#3 ------------------------------- consensus_9364#0 GTAGCGGAAAAGATGGCCGCCATCCACAGTA 1569 consensus_9364#2 ------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||