These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9368#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1416 fasta sequence [CAGATCGCCCCAGGTTTCTTCGTGCAAAAAAAAGAATATTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGAAAGCGATGTGTCAAAGATGAAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG-GACGACGATCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG-CACTGGAGCGGTTGGA-GATGA-GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC---CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACA-TCCGCCGGCAACAGTACGCCGGCTTCGCT-GGAAGCGC-TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGCAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAATCAGCCGCTTAATTGCGGACGGACAAATGTAGGTTTCCTTTTACCCGATTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGCTACTCCGGTCTCCTGAGAGCGACGAAGAGCGCCATCTCGTGTGTACGAAGAAAGGGGACACGTTAGTGGGCTGAGTGTAGAATAAGACAACTCAATGATGTGTAGCGATCATTGGCGGCAATTGGACGATAATGTGTTTTTATTTTGCAAATCAACTTAAAATAAACATACTAAATCACGTATATACGAT] [+] EMBL AL693576 [CAGATCGCCCCAGGTTTCTTCGTGCAAAAAAAAGAATATTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGAAAGCGATGTGTCAAAGATGAAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGATCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGG CGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGACGATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGA CANTAC CAGCAGCAGCAGCAGCGCTACCG AACCGATACTCCTGCCG TAGCTCCGG A CGCGGCAACGGATAAAATGCAGGCGCGTGCGG ] [+] EMBL BM612666 [ ccgTTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGAAAGCGATGTGTCAAAGATGAAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCCACTGGAGCGGTTGGA GATGAGGGGCCAAAAAGTTCGGTTCG ] [+] EMBL BM614636 [ CCGATTTAACTAAACAAACTATTGTAACAATAAACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAACCAGTATCAGCAAAACTCAATCACGATGAGCGAAACCGATGTGTCAAAGATGAAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAACCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACGTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAG ] [+] EMBL BM579648 [ ccgcatttTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGTGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAACCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACGTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCG ] [+] EMBL BX626098 [ GCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTGNGACGACGATCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACATTCCGCCGGCAACAGTACGCCGGCTTCGCTGGGAAGCGCTTGAAAAAGCGTGCCna ] [+] EMBL BX622584 [ GTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGATCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACA TCCGCCGGCAACAGTACGCCGGCTTCGCT GGAAGCGC TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAAT ] [+] EMBL BX618474 [ CGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCC AAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACA TCCGCCGGCAACAGTACGCCGGCTTCGCT GGAAGCGC TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGCAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTA ] [+] EMBL BX615362 [ ACAGTGGCAGCGATGGCGAGCCGGATAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACA TCCGCCGGCAACAGTACGCCGGCTTCGCT GGAAGCGC TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGCAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAATCAGCCGCTTAATTGCGGACGGACAAATGTAGGTTTCCTTTTACCCGATTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGCTACTCCGGTCTCCTGAGAGCGACGAAGAGCGCCATCTCGTGTGTACGAAG ] [+] EMBL BX621391 [ TTGACCAGCGCCAGCAGCATCACA TCCGCCGGCAACAGTACGCCGGCTTCGCT GGAAGCGC TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGCAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAATCAGCCGCTTAATTGCGGACGGACAAATGTAGGTTTCCTTTTACCCGATTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGCTACTCCGGTCTCCTGAGAGCGACGAAGAGCGCCATCTCGTGTGTACGAAGAAAGGGGACACGTTAGTGGGCTGAGTGTAGAATAAGACAACTCAATGATGTGTAGCGATCATTGGCGGCAATTGGACGATAATGTGTTTTTATTTTGCAAATCAACTTAAAATAAACATACTAAATCACGTAT ] [+] EMBL BM600603 [ ccgGTGGGCTGAGTGTAGAATAAGACAACTCAATGATGTGTAGCGATCATTGGCGGCAATTGGACGATAATGTGTTTTTATTTTGCAAATCAACTTAAAATAAACATACTAAATCACGTATATACGAT] consensusID : consensus_9368#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 906 fasta sequence [TCCCCGCAGGTTATAGCGTAGAGATTTCTCTTCGTGCAAAAAAAAAGAATATTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGCAAAGCGATGTGTCCAAAGCATGCACNGTGTTGCCTGATCTTGCACACACAACAGAGCTCAAAGTGCGCGTGGTATTGAGCGTGCATGGGCCAACAAGAACGAGCTCANTGGATCGATTACAACACAGCCACTGCTGGTCAGGTGGCGATTGTTGCTTGGAAGCATACGGCCAACTCGGAGGACCTGCTGGACGACGATCTTGAACCGACAGATCTAGNCTGGACGAGGACANAAGATCTCACCGATACCTGGTGGTGGAAGGAAAGGACCACATTACTTGAACTACGACCGACCGCCGAGCGCATACAGCGTAACATCGATATNCAACCCGGATGAGCCGCGGAANAGCCGGAAGACGAAACCGACCGAAACACGGGGAGGACAAAGGTCACAGACGCTCCAGGCCGCGCGTACAGATATCCCTGACAGGCGAAAGATATATCNCATTAACCNAAAAGCCCCAAACACNCTTNGNCCGCCGAGACAAAACAGGACACCGGACGGCGAACAGACGGCACGGCGAACCCGGAANACAAGGCAACCACGGAGAAACAGCCCGGAGACNCCTNCACCCGAGGTTCCAAATACGCGGCCAGGGTGGCCCAGCGCAACACGGTGGGGACNGGCGNATGGGACGCACACCCGGGGAACAAACAGCAAAGNCGACAAACANACTATCCGGGTCACAGNCTATNGNACCGCGACACTAGGACAGACGCGATTCTGGGAGACA] [+] EMBL AL693133 [TCCCCGCAGGTTATAGCGTAGAGATTTCTCTTCGTGCAAAAAAAAAGAATATTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGCAAAGCGATGTGTCCAAAGCATGCACNGTGTTGCCTGATCTTGCACACACAACAGAGCTCAAAGTGCGCGTGGTATTGAGCGTGCATGGGCCAACAAGAACGAGCTCANTGGATCGATTACAACACAGCCACTGCTGGTCAGGTGGCGATTGTTGCTTGGAAGCATACGGCCAACTCGGAGGACCTGCTGGACGACGATCTTGAACCGACAGATCTAGNCTGGACGAGGACANAAGATCTCACCGATACCTGGTGGTGGAAGGAAAGGACCACATTACTTGAACTACGACCGACCGCCGAGCGCATACAGCGTAACATCGATATNCAACCCGGATGAGCCGCGGAANAGCCGGAAGACGAAACCGACCGAAACACGGGGAGGACAAAGGTCACAGACGCTCCAGGCCGCGCGTACAGATATCCCTGACAGGCGAAAGATATATCNCATTAACCNAAAAGCCCCAAACACNCTTNGNCCGCCGAGACAAAACAGGACACCGGACGGCGAACAGACGGCACGGCGAACCCGGAANACAAGGCAACCACGGAGAAACAGCCCGGAGACNCCTNCACCCGAGGTTCCAAATACGCGGCCAGGGTGGCCCAGCGCAACACGGTGGGGACNGGCGNATGGGACGCACACCCGGGGAACAAACAGCAAAGNCGACAAACANACTATCCGGGTCACAGNCTATNGNACCGCGACACTAGGACAGACGCGATTCTGGGAGACA] consensusID : consensus_9368#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 774 fasta sequence [CAGAATCGGCACGAGGTGACGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGGTTGGAGATNAGGGCCAAAAAGTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAAGCAGCAGCGCTACCGCAAACCGATACTCCTGCCGCTTAGCTCCGGCACCGCGGCAAACGGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGGCATCACATCCGCCGGCAAACAGGTACGCCCGGGCTTCGCTGGAAGGCGCTGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGGCAACGGCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAAGTCAGCCGCTTAAGTTGCGGACGGACAAATGTAGGTTTCCGTTTTACCCGAGTTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGGCTACTCCGGTCTCCTGAGAGCGACGAAAGAGGCGCCATCTCGTGTGTACGAAGAAAGGGGACACCGTAAGTTGGGCTTAGTTGTAGAA] [+] EMBL BX468653 [CAGAATCGGCACGAGGTGACGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGGTTGGAGATNAGGGCCAAAAAGTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAAGCAGCAGCGCTACCGCAAACCGATACTCCTGCCGCTTAGCTCCGGCACCGCGGCAAACGGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGGCATCACATCCGCCGGCAAACAGGTACGCCCGGGCTTCGCTGGAAGGCGCTGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGGCAACGGCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAAGTCAGCCGCTTAAGTTGCGGACGGACAAATGTAGGTTTCCGTTTTACCCGAGTTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGGCTACTCCGGTCTCCTGAGAGCGACGAAAGAGGCGCCATCTCGTGTGTACGAAGAAAGGGGACACCGTAAGTTGGGCTTAGTTGTAGAA] consensusID : consensus_9368#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 745 fasta sequence [CCGAGCCAAGCGCACTGAGACACACGGACCGTTCCGGTAACACACATTCTTTCCCACGTTGTTTTCCTCATTTTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGG] [+] EMBL BM616401 [CCGAGCCAAGCGCACTGAGACACACGGACCGTTCCGGTAACACACATTCTTTCCCACGTTGTTTTCCTCATTTTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGT ] [+] EMBL BM577994 [ ccgACATTCTTTCCCACGTTGTTTTCCTCATTTTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCA ] [+] EMBL BM586990 [ ccgCTTTCCCACGTTGTTTTCCTCATTTTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGG] consensusID : consensus_9368#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 513 fasta sequence [ATCGGCCGAGCTGATTTCACGGATGAGCCGCGAAAACGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCAGCACTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACATCCGCCGGCAACAGTACGCCGGCTTCGCTGGAAGCGCTGAAAAAGCGTGC] [+] EMBL AL934956 [ATCGGCCGAGCTGATTTCACGGATGAGCCGCGAAAACGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCAGCACTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACATCCGCCGGCAACAGTACGCCGGCTTCGCTGGAAGCGCTGAAAAAGCGTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9368#0 CAGATCGCCCCAGGTTTCTTCGTGCAAAAAAAAGAATATTCCTATTTAACTAAACAAACT 60 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 ------------------------------------------------------------ consensus_9368#0 ATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCT 120 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ---------------------------------------------CCGAGCCAAGCGCAC 15 consensus_9368#1 ------------------------------------------------------------ consensus_9368#0 CGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGAAAGCGATGTGTCAAAGATGA 180 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 TGAGACACACGGACCGTTCCGGTAACACACATTCTTTCCCACGTTGTTTTCCTCATTTTG 75 consensus_9368#1 ------------------------------------------------------------ consensus_9368#0 AGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGA 240 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 TAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAG 135 consensus_9368#1 ------------------------------------------------------------ consensus_9368#0 ACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATA 300 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 AACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGAT 195 consensus_9368#1 ------------------------------------------------------------ consensus_9368#0 CGGCCAACTCGGAGGACCTGCTGGACGACGATCTGAACGACGATCTGCTGGACGAGGACA 360 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGAC 255 consensus_9368#1 ------------------------------------------------------------ consensus_9368#0 AAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCG 420 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 AAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGC 315 consensus_9368#1 -----------------------------------------------------TCCCCGC 7 consensus_9368#0 ATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCC-GGAAGACGAACCGACCGAA 479 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ---ATCGGCCGAGCTGATTTCACGGATGAGCCGCGAAAAC-GGAAGACGAACCGACCGAA 56 consensus_9368#3 GATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAA 375 consensus_9368#1 AGGTTATAGCGTAGAGATTTCTCTTCGTGCAAAAAAAAAGAATATTCCTATTTAACTAAA 67 consensus_9368#0 ACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATT 539 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATT 116 consensus_9368#3 ACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATT 435 consensus_9368#1 CAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCT 127 consensus_9368#0 TCCATTACCAAGCCCACACTTGCGCCGGA---AACGACCGTCGGC----AGCGAGGCACC 592 consensus_9368#2 --------------CAGAATCG-GCACGA---GGTGAC-GTCGGC----AGCGAGGCACC 37 consensus_9368#4 TCCATTACCAAGCCCACACTTGCGCCGGA---AACGACCGTCGGC----AGCGAGGCACC 169 consensus_9368#3 TCCATTACCAAGCCCACACTTGCGCCGGA---AACGACCGTCGGC----AGCGAGGCACC 488 consensus_9368#1 TCTTCTCGGCTAAGCAGTATCA-GCAAAACTCAATCACGATGAGCGCAAAGCGATGTGTC 186 ** * ** * ** * ** ***** * * consensus_9368#0 GAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCA--GCAACAGTGGC 650 consensus_9368#2 GAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCA--GCAACAGTGGC 95 consensus_9368#4 GAAAGCACAGCGACAGCCGTTCTCTT-GGCCCAATCGGCCGGTGCCA--GCAACAGTGGC 226 consensus_9368#3 GAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCA--GCAACAGTGGC 546 consensus_9368#1 CAAAGCATGCACNGTGTTGCCTGATCTTGCACACACAACAGAGCTCAAAGTGCGCGTGGT 246 ****** * * * ** ** * * * ** * **** consensus_9368#0 AGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGG 710 consensus_9368#2 AGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGG 155 consensus_9368#4 AGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGG 286 consensus_9368#3 AGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCACTGGAGCGG 606 consensus_9368#1 ATTGAGCGTGCATGGGCCAACAAGAACG---AGCTCANTGGATCGATTACAACACAGCCA 303 * ** * * ** ** ** ** ***** * ** ** *** consensus_9368#0 TTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGC 770 consensus_9368#2 TTGGAGATNAGGGCCAAAAAGT-CGGTTCGGCACAAACAGGCACACCGACCACTACCAGC 214 consensus_9368#4 TTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGC 346 consensus_9368#3 TTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGC 666 consensus_9368#1 CTGCTGGTCAGGTGGCGATTGT-TGCTTGGAAGCATACGGCCAACTCGG--AGGACCTGC 360 ** * * *** * ** * ** * ** ** * ** ** * *** ** consensus_9368#0 AGCA-GCAGCAGCGCTACCGCAA-CCGATACTCCTGCCGCT-AGCTCCGGCACCGCGGCA 827 consensus_9368#2 AGCAAGCAGCAGCGCTACCGCAAACCGATACTCCTGCCGCTTAGCTCCGGCACCGCGGCA 274 consensus_9368#4 AGCA-GCAGCAGCACTACCGCAA-CCGATACTCCTGCCGCT-AGCTCCGGCACCGCGGCA 403 consensus_9368#3 AGCA----GCAGCGCTACCGCAA-CCGATACTCCTGCCGCT-AGCTCCGGCACCGCGGCA 720 consensus_9368#1 TGGA--CGACGATCTTGAACCGA-CAGATCTAGNCTGGACGAGGACANAAGATCTCACCG 417 * * * * * * * *** * * * * * * consensus_9368#0 AC--GGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAG-CATC 884 consensus_9368#2 AACGGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGGCATC 334 consensus_9368#4 AC--GGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAG-CATC 460 consensus_9368#3 AC--GGATAAAATGCAGGCGCGTGCGG--------------------------------- 745 consensus_9368#1 ATACCTGGTGGTGGAAGGAAAGGACCACATTACTTGAACT-ACGACCGACCGCCGAGCGC 476 * * *** * * consensus_9368#0 ACATCCGCCGGCAAC--AGTACGCC--GGCTTCGCTG-GAAG-CGCTGAAAAAGCGTGCC 938 consensus_9368#2 ACATCCGCCGGCAAACAGGTACGCCCGGGCTTCGCTG-GAAGGCGCTGAAAAAGCGTGCC 393 consensus_9368#4 ACATCCGCCGGCAAC--AGTACGCC--GGCTTCGCTG-GAAG-CGCTGAAAAAGCGTGC- 513 consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 ATACAGCGTAACATCGATATNCAACCCGGATGAGCCGCGGAANAGCCGGAAGACGAAACC 536 consensus_9368#0 GAGCGTTTCGGTGGCTCCGTCTCATCCG-AAATGAGCAAACTCGAGCAGGAGGAAAAGCT 997 consensus_9368#2 GAGCGTTTCGGTGGCTCCGTCTCATCCG-AAATGAGCAAACTCGAGCAGGAGGAAAAGCT 452 consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 GACCGAAACACGGGGAGGACAAAGGTCACAGACGCTCCAGGCCGCGCGTACAGATATCCC 596 consensus_9368#0 GGCCAAGCGGCAAGCTCGCTTCG--G-CTTGGCGGCTAGCAGCAGTCCGGCCCCATCGG- 1053 consensus_9368#2 GGCCAAGCGGCAAGCTCGCTTCG--GGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGG 510 consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 TGACAGGCGAAAGATATATCNCATTAACCNAAAAGCCCCAAACACNCTTNGNCCGCCGAG 656 consensus_9368#0 CAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGC 1113 consensus_9368#2 CAACGGC-AACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGC 569 consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 ACAAAAC--AGGACACCGGACGGCGAACAGACGGCACGGCGAACCCGGAANACAAGGCAA 714 consensus_9368#0 GACTCAGGTTGGAGCGGTTCAAA-TCAGCCGCTTAA-TTGCGGACG---GACAAATGTAG 1168 consensus_9368#2 GACTCAGGTTGGAGCGGTTCAAAGTCAGCCGCTTAAGTTGCGGACG---GACAAATGTAG 626 consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 CCACGGAGAAACAGCCCGGAGACNCCTNCACCCGAGGTTCCAAATACGCGGCCAGGGTGG 774 consensus_9368#0 GTTTCC-TTTTACCCGA-TTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTG- 1225 consensus_9368#2 GTTTCCGTTTTACCCGAGTTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGG 686 consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 CCCAGCGCAACACGGTGGGGACNGGCGNATGGGACGCACACCCGGGGAACAAACAGCAAA 834 consensus_9368#0 CTACTCCGGTCTCCTGAGAGCGACGAAGA--GCGCCATCTCGTGTGTACGAAGAAAGGGG 1283 consensus_9368#2 CTACTCCGGTCTCCTGAGAGCGACGAAAGAGGCGCCATCTCGTGTGTACGAAGAAAGGGG 746 consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 GNCGACAAACANACTATCCGGGTCACAGNCTATNGNACCGCG-ACACTAGGACAGACGCG 893 consensus_9368#0 ACACGTTAG--TGGGCTGAGT-GTAGAATAAGACAACTCAATGATGTGTAGCGATCATTG 1340 consensus_9368#2 ACACCGTAAGTTGGGCTTAGTTGTAGAA-------------------------------- 774 consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 ATTCTGGGAGACA----------------------------------------------- 906 consensus_9368#0 GCGGCAATTGGACGATAATGTGTTTTTATTTTGCAAATCAACTTAAAATAAACATACTAA 1400 consensus_9368#2 ------------------------------------------------------------ consensus_9368#4 ------------------------------------------------------------ consensus_9368#3 ------------------------------------------------------------ consensus_9368#1 ------------------------------------------------------------ consensus_9368#0 ATCACGTATATACGAT 1416 consensus_9368#2 ---------------- consensus_9368#4 ---------------- consensus_9368#3 ---------------- consensus_9368#1 ---------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||