These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9373#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1241 fasta sequence [CCGCTCGCTGTCTGTTTCGTTTTCGGGCACACGTTTGGAGGGCTACGGCACTGTTGGCCAGCAGAAAAATTGTAATTTTGGTTGTGCAAAACACTGCTTCCACCCGTCCCACCGATACACAGTCCGGACGTTCCAGCTCCAGCAAGGTGGTACAGCCGCCCGCTTCCCGTTTACTGTGATAGAGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCAGTGCAAATTCGCAACCATGCCTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGACGAGGACGGCGACGGGGAGGAAAACGACTCGGACGAGTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGACGAT-GAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAAGCAGCGGGCAGCGGCCGCCTACCAGAAGCGGCACG-CGAGGGCAAAACGGCCCAGGCGAAGGCGGATCTCGCCCGGTTGGCCATCATCAAGCAGCACCGCGCGGAGGCGGCCGCAAGG-GCGA-GGCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAGAGCGGCGCATCATAGGCGCTTATCATCGCCGCGTAGCTGTGCAGCTGTAGGTTAACGAGACGTACGATTCAATTCAAAACACGTGTGTAATTTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGC-G-CAGAATGAGTGCTTCCTGTACGTGTGTGTGCACTCTCCCGTCCTTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCCTATCCTCCCTTAATCTCCCTCTAACTCCTTTTACTCTCCTTTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAGAGTAAAGTTCTGTTTTTGCACCCCACTACAATCCCCCTGTCCTACTGAGAGTGTTGTATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAACTCCAATCGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAAAAGTGCCAAAG] [+] EMBL BM652285 [CCGCTCGCTGTCTGTTTCGTTTTCGGGCACACGTTTGGAGGGCTACGGCATTGTTGGCCAGCAGAAAAATTGTAATTTTGGTTGTGCAAAACACTGCTTCCACCCGTCCCACCGATACACAGTCCGGACGTTCCAGCTCCAGCAAGGTGGTACAGCCGCCCGCTTCCCGTTTACTGTGATAGAGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCAGTGCAAATTCGCAACCATGCCTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGACGAGGACGGCGACGGGGAGGAAAACGACTCGGACGAGTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGACGAT GAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAA ] [+] EMBL CNS08S20 [ gGGGCACACGTTTGGAGGGCTACGGCACTGTTGGCCAGCAGAAAAATTGTAATTTTGGTTGTGCAAAACACTGCTTCCACCCGTCCCACCGATACACAGTCCGGA A CTCCAGCAAGGTGGTGCAGCCGCCCGCTTCCCGTTTACTGTGATAGAGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCAGTGCAAATTCGCAACCATGCCTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCA CGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGACGAGGACGGTGATGGGGAGGAAAACGACTCTGACGAGTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGTAGGAGGTGGCCGAGGACGAT GAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAAGCAGCGGGCAGCGGCCGCCTACCAGAAGCGGCACG CGAGGGCAAAACGGCCCAGGCGAAGGCGGATCTCGCCCGGTTGGCCATCATCAAGCAGCACCGCGCGGAGGCGGCCGCAAGG GCGAGGGCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAGAGCGGCGCATCATAGGCGCTTATCATCG ] [+] EMBL CNS090T0 [ CACGTTTGGAGGGCTACGGCACTGTTGGCCAGCAGAAAAATTGTAATTTTGGTTGTGCAAAACACTGCTTCCACCCGTCCCACCGATACACAGTCCGGA A CTCCAGCAAGGTGGTGCAGCCGCCCGCTTCCCGTTTACTGTGATAGAGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCAGTGCAAATTCGCAACCATGCCTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCA CGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGACGAGGACGGTGATGGGGAGGAAAACGACTCTGACGAGTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGAAGGAGGTTGCCGAGGACGATAGAACCGCAGCT ] [+] EMBL BX601903 [ TACGGCACTGTTGGCCAGCAGAAAAATTGTAATTTTGGTTGTGCAAAACACTGCTTCCACCCGTCCCACCGATACACAGTTCGGACGTTCCAGCTCCAGCAAGGTGGTACAGCCGCCCGCTTCTCGTTTACTGTGATAGAGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCAGTGC AATTCGCAACCATGCCTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAAGATGAGGACGAGGACGGCGACGGGGAGGAAAACGACTCGGACGAGTCGGAATCGGAG ] [+] EMBL BX613270 [ GCTTCCCGTTTACTGTGATAGAGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCAGTGCAAATTCGCAACCATGCCTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGAAGAGGACGGCGACGGGGAGGAAAACGACTCGGACGAGTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGACGAT GAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAAGCAGCGGGCAGCGGCCGCCTACCAGAAGCGGCACGCCGAGGGCAAAACGGCCCAGGCGAAGGCGGATCTCGCCCGGTTGGCCATCATCAAGCAGCACCGTGCGGAGGCGGCCGCAAGGCGCGA GGCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAGAGCGGCGCATCATAGGCGCTTATCACCGCCGCGTAGCTGTGCAGCTGTAGGTTAACGAGACGTACGATTCAATTCAAAACACGTGTGTAATTTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGC G CAGAATGAGTG ] [-] EMBL CNS090T1 [ CGA GGCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAGAGCGGCGCATCATAGGCGCTTATCATCGCCGCGTAGCTGTGCAGCTGTAGGTTAACGAGACGTACGATTCAATTCAAAACACGTGTGTAATTTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGCTGTCAGAATGAGTGCTTCCTGTACGTGTGTGTGCACTCTCCCGTCCTTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCCTATCCTCCCTTAATCTCCCTCTAACTCCTTTTACTCTCCTTTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAGAGTAAAGTTCTGTTTTTGCACCCCACTACAATCCCCCTGTCCTACTGAGAGTGTTTTATTTCGATTTATGCAGTAAATTTATATTTAGAGATAAAT ] [-] EMBL CNS08S21 [ GCAGCTGTAGGTTAACGAGACGTACGATTCAATTCAAAACACGTGTGTAATTTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGC G CAGAATGAGTGCTTCCTGTACGTGTGTGTGCAATCTCCCGTCCTTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCCTATCCTCCCTTAATCTCCCTCTAACTCCTTTTACTCTCCTTTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAGAGTAAAGTTCTGTTTTTGCACCCCACTACAATCCCCCTGTCCTACTGAGAGTGTTGTATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAACTCCA ] [+] EMBL CNS09I4G [ GCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGC G CAGAATGAGTGCTTCCTGTACGTGTGTGTGCACTCTCCCGTCCTTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCCTATCCTCCCTTAATCTCCCTCTAACTCCTTTTACTCTCCTTTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAGAGTAAAGTTCTGTTTTTGCACCCCACTACAATCCCCCTGTCCTACTGAGAGTGTTGTATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAACTCCAATCGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAAAAGTGCCAAAG] consensusID : consensus_9373#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1108 fasta sequence [TGCTTCCACCCGTCCCGCCGATACACAGTCCGGACGTTCTAGCTCCAGCAAGGTGGTACAGCCGCCCGCTTCCCGTTTACTGTGATAGAGCTTCTCGACGCGAGCTTGCCTTCATCTTCCTTTCCGCTTCCATGCGGTCCCGCGAAAATTGGAACAGCAAACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGACGAGGACGGCGACGGGGAGGAAAACGACTCGGACGAGTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCAGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGACGATGAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAAGCAGCGGGCAGCGGCCGCCTACCAGAAGCGGCACGCCGAGGGCAAAACGGCCCAGGCGAAGGCGGATCTCGCCCGGTTGGCCATCATCAAGCAGCACCGTGCGGAGGCGGCCGCAAGGCGCGAGGCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAGAGCGGCGCATCATAGGCGCTTATCACCGCCGCGTAGCTGTGCAGCTGTAGGNTAACGAGACGTACGATTCAATTCAAAACACG-TGTGTAATTTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGCGCAGAATGAGTGCTTCCCGTACGTGTGTGCACTCTCCCGTCCTTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCCTATCCTCCCTCTAACTCCCTTTATCCCCCCTCTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAAAAAAGAAATTTTTCTGTTTTTGCACCCCACTACAATCCCCCTGTCCTACTGAGAGTGTTGTATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAACTCCAATCGGCTGTATGGTTTTAAAAAAAAAAA] [+] EMBL BX625408 [TGCTTCCACCCGTCCCGCCGATACACAGTCCGGACGTTCTAGCTCCAGCAAGGTGGTACAGCCGCCCGCTTCCCGTTTACTGTGATAGAGCTTCTCGACGCGAGCTTGCCTTCATCTTCCTTTCCGCTTCCATGCGGTCCCGCGAAAATTGGAACAGCAAACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGACGAGGACGGCGACGGGGAGGAAAACGACTCGGACGAGTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCAGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGACGATGAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAAGCAGCGGGCAGCGGCCGCCTACCAGAAGCGGCACGCCGAGGGCAAAACGGCCCAGGCGAAGGCGGATCTCGCCCGGTTGGCCATCATCAAGCAGCACCGTGCGGAGGCGGCCGCAAGGCGCGAGGCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAGAGCGGCGCATCATAGGCGCTTATCACCGCCGCGTAGCTGTGCAGCTGTAGGNTAACGAGACGTACGATTCAATTCAAAACACG TGTGTAATTTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATC ] [+] EMBL BX605008 [ CCGAGGACGAAGAACCGCAGCCGACCCGCCGGGAGAAGGAGGAGCTGGAGAAGCAGCGGGCAGCGGCCGCCTACCAGAAGCGGCACGCCGAGGGCAAAACGGCCCAGGCGAAGGCG ] [+] EMBL AGA283711 [ GGCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAGAGCGGCGCATCATAGGCGCTTATCACCGCCGCGTAGCTGTGCAGCTGTAGGTTAACGAGACGTACGATTCAATTCAAAACACG TGTGTAATTTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGCGCAGAATGAGTGCTTCCCGTACGTGTGTGCACTCTCCCGTCCTTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCCTATCCTCCCTCTAACTCCCTTTATCCCCCCTCTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAAAAAAGAAATTTTTCTGTTTTTGCACCCCACTACAATCCCCCTGTCCTACTGAGAGTGTTGTATAT ] [-] EMBL AGA284999 [ ACGATTCAATTCAAAA ACGTTGTGTAATTTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGCGCAGAATGAGTGCTTCCCGTACGTGTGTGCACTCTCCCGTCCTTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCCTATCCTCCCTCTAACTCCCTTTATCCCCCCTCTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAAAAAAGAAATTTTTCTGTTTTTGCACCCCACTACAATCCCCCTGTCCTACTGAGAGTGTTGTATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAACTCCAATCGGCTGTATGGTTTTAAAAAAAAAAA] consensusID : consensus_9373#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 620 fasta sequence [CTACCAGTACCGGCACGCCCGAGGGGCAAAACGTCCCTAGCCTGAAGCCGGATCTTCGTCCCGGTTGGCCAATCATCAAGCTAGCACCGTGTCGGAGCGCGGCCGTCAAGGCGCGAGNGTCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAGATGCGGCGCATCCATAGGCGCTTATCACCGCCGCGTAGCTGTGCAGCTGTAGGTAACGAGACGTACGATTCAATTCAAAACACGTGTGTAATTTAGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGCGCAGAATGAGTGCTTCCTGTACGTGTGTGTGCACTCTCCCGTCCTTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCTATCCTCCCTTAATCTCCCTCTAACTCCCTTTATCCCCCCTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAAAGAAATTTTTCTGTTTTTGCACCCCACTACAATCCCTCTGTCCTACTGAGAGTGTTGTATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAAAAAANAAAAAAAAAGGGCAGCATGT] [-] EMBL BX466741 [CTACCAGTACCGGCACGCCCGAGGGGCAAAACGTCCCTAGCCTGAAGCCGGATCTTCGTCCCGGTTGGCCAATCATCAAGCTAGCACCGTGTCGGAGCGCGGCCGTCAAGGCGCGAGNGTCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAGATGCGGCGCATCCATAGGCGCTTATCACCGCCGCGTAGCTGTGCAGCTGTAGGTAACGAGACGTACGATTCAATTCAAAACACGTGTGTAATTTAGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTGGTTTGTTCTGTTCGGCGCAGAATGAGTGCTTCCTGTACGTGTGTGTGCACTCTCCCGTCCTTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCTATCCTCCCTTAATCTCCCTCTAACTCCCTTTATCCCCCCTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAAAGAAATTTTTCTGTTTTTGCACCCCACTACAATCCCTCTGTCCTACTGAGAGTGTTGTATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAAAAAANAAAAAAAAAGGGCAGCATGT] consensusID : consensus_9373#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 555 fasta sequence [CCGCCCACGCGTCCGGTTTGGAGGGCTACGGCATTGTTGGCCAGCAGAAAAATTGTAATTTTGGTTGTGCAAAACACTGCTTCCACCCGTCCCACCGATACACAGTCCGGACGTTCCAGCT-CCAGCAA-GGTGGTACAG-CCGCCCGCTTCCCGTTTACT--GTG---A-TAGAGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCAGTGCAAATTCGCAACCATGCCTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGACGA-GGACGGCGACGGGGAGGAAAACGACTCGGACGAGTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGACGATGAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAA] [+] EMBL BM645332 [CCGCCCACGCGTCCGGTTTGGAGGGCTACGGCATTGTTGGCCAGCAGAAAAATTGTAATTTTGGTTGTGCAAAACACTGCTTCCACCCGTCCCACCGATACACAGTCCGGACGTTCCAGCT CCAGCAA GGTGGTACAG CCGCCCGCTTCCCGTTTACT GTG A TAGAGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCAGTGCAAATTCGCAACCATGCCTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGACGA GGACGGCGACGGGGAGGAAAACGACTCGGACGAGTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGACGATGAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAA] [+] EMBL AL932151 [ cccaggttaTACGGCATTGTTGGCCAGCAGAAAAATTGTAATTTTGGTTGTGC AAACACTG TT CACCCGT CCACCGATACACAGTCCGGACGTTCCAGCTCCCAGCAAGGGTGGTACAGACCGCCCGCTTCCCGTTTACTTGGTGGAAATTAGAGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCAGTGCAAATTCGCAACCATGCCTCGAGGAAAGTACGTTAGTCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGACGANCGACGGCGACGGGGAGGAAAACGACTCGGACG CTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTG ] consensusID : consensus_9373#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 528 fasta sequence [GATCCGATTGTGATGCGCTTCGTTTTGTTTTGTTTGTTTGCAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGAAGAGGACGGCGACGTGGAGGAAAACGACTCGGACGAGTCGGAATCTGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGACGATGAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAAGCAGCGGGCAGCGGCCGCCTACCAGAAGCGGCACGCCGAGGGCAAAACGGCCCAGGCGAAGTCGGATCTCGCCCGGTTGGCCATCATCAAGCAGCACCGTGCGGAGGCGGCCGCAAGGCGCGAGGCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAG] [+] EMBL BX611936 [GATCCGATTGTGATGCGCTTCGTTTTGTTTTGTTTGTTTGCAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAGGAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAACAGGACTCGGACGAGGATGAGGAAGAGGACGGCGACGTGGAGGAAAACGACTCGGACGAGTCGGAATCTGAGGAGGAGGAAAATGCGAAGGGTGCGGCGGGTGTGATACAGATCCAGAACCCGAACCGGGTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGACGATGAACCGCAGCTGACCCGCCGGGAGAAGGAGGAGCTGGAGAAGCAGCGGGCAGCGGCCGCCTACCAGAAGCGGCACGCCGAGGGCAAAACGGCCCAGGCGAAGTCGGATCTCGCCCGGTTGGCCATCATCAAGCAGCACCGTGCGGAGGCGGCCGCAAGGCGCGAGGCGGAGAAGAAAGAGAAGGAAGCCAAAATGAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9373#3 ----------------CCGCCCACGCGTCCG-GTTTGGAGGGCTACGGCATTGTTGGCCA 43 consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 CCGCTCGCTGTCTGTTTCGTTTTCGGGCACACGTTTGGAGGGCTACGGCACTGTTGGCCA 60 consensus_9373#1 ------------------------------------------------------------ consensus_9373#2 ------------------------------------------------------------ consensus_9373#3 GCAGAAAAATTGTAATTTTGGTTGTGCAAAACACTGCTTCCACCCGTCCCACCG-ATACA 102 consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 GCAGAAAAATTGTAATTTTGGTTGTGCAAAACACTGCTTCCACCCGTCCCACCG-ATACA 119 consensus_9373#1 ----------------------------------TGCTTCCACCCGTCCCGCCG-ATACA 25 consensus_9373#2 ---------------------------------------CTACCAGTACCGGCACGCCCG 21 consensus_9373#3 CAGTCCGGACGTTCCAGCTCCAGCAAGGTGGTACAGCCGCCCGCTTCCCGTTTACTGTGA 162 consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 CAGTCCGGACGTTCCAGCTCCAGCAAGGTGGTACAGCCGCCCGCTTCCCGTTTACTGTGA 179 consensus_9373#1 CAGTCCGGACGTTCTAGCTCCAGCAAGGTGGTACAGCCGCCCGCTTCCCGTTTACTGTGA 85 consensus_9373#2 AGGGGCAAAACGTCCCTAGCCTGAAGCCGGATCTTCGTCCCGGTTGGCCAATCATCAAGC 81 consensus_9373#3 TAG-AGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCA-GTGCAAATTCGCAACCATG 220 consensus_9373#4 -----------------GATCCGATTGTGATGCGCTTC---GTTTTGTTTTGTT----TG 36 consensus_9373#0 TAG-AGCTTCTCGACGCGAGCTTGTTTTCATCCGACGCCA-GTGCAAATTCGCAACCATG 237 consensus_9373#1 TAG-AGCTTCTCGACGCGAGCTTGCCTTCATCTTCCTTTCCGCTTCCATGCGGTCCCGCG 144 consensus_9373#2 TAGCACCGTGTCGGAGCGCGGCCGTCAAGGCGCGAGNGTCGGAGAAGAAAGAGAAGGAAG 141 * * * consensus_9373#3 C---CTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAG 277 consensus_9373#4 T---TTGCAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAG 93 consensus_9373#0 C---CTCGAGGAAAGTACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAG 294 consensus_9373#1 AAAATTGGAACAGCAAACGTTAATCACAAGGGGCGCAATCGCAACTTCACCAACCCGGAG 204 consensus_9373#2 C---CAAAATGAAGATGCGGCGCATCCATAGGCGCTTATCACCGCCGCGTAG---CTGTG 195 * * ** ** ** *** * * * * * * consensus_9373#3 GAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAA 337 consensus_9373#4 GAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAA 153 consensus_9373#0 GAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAA 354 consensus_9373#1 GAGCTAGAGGCGCAGCGCAAGAAGGACGAGGAGGAGAAGAAATGGCGCAAGACGCGGGAA 264 consensus_9373#2 CAGCTGTAGGTA----ACGAGACGTACGATTCAATTCAAAACACGTGTGTAATTTAGGGG 251 **** *** * *** * **** * ** * * * ** consensus_9373#3 CAG-GACTCGGACGAGGATGAGGACGAGGACGGCGACGGGGAGGAAAACGACTCGGACGA 396 consensus_9373#4 CAG-GACTCGGACGAGGATGAGGAAGAGGACGGCGACGTGGAGGAAAACGACTCGGACGA 212 consensus_9373#0 CAG-GACTCGGACGAGGATGAGGACGAGGACGGCGACGGGGAGGAAAACGACTCGGACGA 413 consensus_9373#1 CAG-GACTCGGACGAGGATGAGGACGAGGACGGCGACGGGGAGGAAAACGACTCGGACGA 323 consensus_9373#2 TCGCGATTTTGTTCATCGCGATCGCGA--TCTGCAATCCAGTT-ACGATACTTTTGGTTT 308 * ** * * * ** ** * ** * * * * * * consensus_9373#3 GTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCG-GCGGGTGTGATACAGATCCAGA 455 consensus_9373#4 GTCGGAATCTGAGGAGGAGGAAAATGCGAAGGGTGCG-GCGGGTGTGATACAGATCCAGA 271 consensus_9373#0 GTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCG-GCGGGTGTGATACAGATCCAGA 472 consensus_9373#1 GTCGGAATCGGAGGAGGAGGAAAATGCGAAGGGTGCG-GCAGGTGTGATACAGATCCAGA 382 consensus_9373#2 GTTCTGTTCGGCGCAGAATGAGTGCTTCCTGTACGTGTGTGTGCACTCTCCCGTCCTTGG 368 ** ** * * ** * ** * * * * * * * * * * consensus_9373#3 ACCCGAACCGG-GTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGA---- 510 consensus_9373#4 ACCCGAACCGG-GTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGA---- 326 consensus_9373#0 ACCCGAACCGG-GTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGA---- 527 consensus_9373#1 ACCCGAACCGG-GTGGCGAAAAAGTCCCACCGGAAGGTGGAGGAGGTGGCCGAGGA---- 437 consensus_9373#2 AGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCTATCCTCCCTTAATCTC 428 * ** * * * * * * * * ** ** ** * consensus_9373#3 CGATGAACCGCAGCTGACCCGCCGGG------AGAAGGAGGAGCTGGAGAA--------- 555 consensus_9373#4 CGATGAACCGCAGCTGACCCGCCGGG------AGAAGGAGGAGCTGGAGAAGCAGCGGGC 380 consensus_9373#0 CGATGAACCGCAGCTGACCCGCCGGG------AGAAGGAGGAGCTGGAGAAGCAGCGGGC 581 consensus_9373#1 CGATGAACCGCAGCTGACCCGCCGGG------AGAAGGAGGAGCTGGAGAAGCAGCGGGC 491 consensus_9373#2 CCTCTAACTCCCTTTATCCCCCCTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAA 488 * *** * * *** ** ** *** ** ** * consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 AGCG-GCCGCCTACCAGAAGCGGCACGCCGAGGGCAAAACGGCCCAGGCGAAGTCGGATC 439 consensus_9373#0 AGCG-GCCGCCTACCAGAAGCGGCACGC-GAGGGCAAAACGGCCCAGGCGAAGGCGGATC 639 consensus_9373#1 AGCG-GCCGCCTACCAGAAGCGGCACGCCGAGGGCAAAACGGCCCAGGCGAAGGCGGATC 550 consensus_9373#2 AAAAAGAAATTTTTCTGTTTTTGCACCC---CACTACAATCCCTCTGTCCTACTGAGAGT 545 consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 TCGCCCGGTTGGCCATCATCAAGCAGCACCGTGCGGAGGCGGCCGCAAGGCGCGAGGCGG 499 consensus_9373#0 TCGCCCGGTTGGCCATCATCAAGCAGCACCGCGCGGAGGCGGCCGCAAGG-GCGAGGCGG 698 consensus_9373#1 TCGCCCGGTTGGCCATCATCAAGCAGCACCGTGCGGAGGCGGCCGCAAGGCGCGAGGCGG 610 consensus_9373#2 GTTGTATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAAAAAANAAAAA 605 consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 AGAAGAAAGAGAAGGAAGCCAAAATGAAG------------------------------- 528 consensus_9373#0 AGAAGAAAGAGAAGGAAGCCAAAATGAAGAGCGGCGCATCATAGGCGCTTATCATCGCCG 758 consensus_9373#1 AGAAGAAAGAGAAGGAAGCCAAAATGAAGAGCGGCGCATCATAGGCGCTTATCACCGCCG 670 consensus_9373#2 AAAAGGGCAGCATGT--------------------------------------------- 620 consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 CGTAGCTGTGCAGCTGTAGGTTAACGAGACGTACGATTCAATTCAAAACACGTGTGTAAT 818 consensus_9373#1 CGTAGCTGTGCAGCTGTAGGNTAACGAGACGTACGATTCAATTCAAAACACGTGTGTAAT 730 consensus_9373#2 ------------------------------------------------------------ consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 TTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTG 878 consensus_9373#1 TTTGGGGTCGCGATTTTGTTCATCGCGATCGCGATCTGCAATCCAGTTACGATACTTTTG 790 consensus_9373#2 ------------------------------------------------------------ consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 GTTTGTTCTGTTCGGCGCAGAATGAGTGCTTCCTGTACGTGTGTGTGCACTCTCCCGTCC 938 consensus_9373#1 GTTTGTTCTGTTCGGCGCAGAATGAGTGCTTCCCGTACGTGTGTGCACTCTCCCGTCCTT 850 consensus_9373#2 ------------------------------------------------------------ consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 TTGGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCCTATCCTCCCTTA 998 consensus_9373#1 GGAGCCATGTCAGCGAGACAACATCCCTTCCTTTAAATGTACCCCCTATCCTCCCTCTAA 910 consensus_9373#2 ------------------------------------------------------------ consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 ATCTCCCTCTAACTCCTTTTACTCTCCTTTCTCTCTCTAGTTGGATAAGTTGAGAATGTA 1058 consensus_9373#1 CTCCCTTTATCCCCCCTCTCTCTCTCTAGTTGGATAAGTTGAGAATGTAGCAAAAAAAAA 970 consensus_9373#2 ------------------------------------------------------------ consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 GCAAAAAAAGAGTAAAGTTCTGTTTTTGCACCCCACTACAATCCCCCTGTCCTACTGAGA 1118 consensus_9373#1 AAAGAAATTTTTCTGTTTTTGCACCCCACTACAATCCCCCTGTCCTACTGAGAGTGTTGT 1030 consensus_9373#2 ------------------------------------------------------------ consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 GTGTTGTATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAACTCCAATC 1178 consensus_9373#1 ATATCGATATATGCAGTAAATTTATATTTAGAGATAAATATAAAACTCCAATCGGCTGTA 1090 consensus_9373#2 ------------------------------------------------------------ consensus_9373#3 ------------------------------------------------------------ consensus_9373#4 ------------------------------------------------------------ consensus_9373#0 GGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAAAAGTGCCA 1238 consensus_9373#1 TGGTTTTAAAAAAAAAAA------------------------------------------ 1108 consensus_9373#2 ------------------------------------------------------------ consensus_9373#3 --- consensus_9373#4 --- consensus_9373#0 AAG 1241 consensus_9373#1 --- consensus_9373#2 --- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||