These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9378#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2524 fasta sequence [CCGAGCTGAGCAAGTTCGAGACGGAGCACTCGATCAGCTTCATCCCGCCGGACGGTGAGTTCGAGCTGATGCGCTACCGCACCACCAAGGACATCTCGCTGCCATTCCGGGTGATCCCGCTGGTGCGGGAGGTCGGCCGGACCAAGATGGAGGTGAAGGTGGTGCTCAAGTCGAACTTCAAGCCGTCGCTGCTCGGGCAGAAGATTGAGGTGAAGATACCG-CGCCGCTGAACACGTCCGGCGTGCAGCTGATCTGCCTGAAGGGCAAGGCGAAGTACAAGGCGTCCGAGAATGCGATCGTATGGAAAATTAAACGCATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA-CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA-TTTCAAGCCCTCACACACACACACACA-C---CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAATTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG-AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCA--GCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCATACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGTGCTTGTATTCGGAAGCCGCGAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAACAAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTGCGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAGGAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGAGTTAGAGAAGAAAGGGTGGGAGTGCGTGTACAACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCACATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGGAAATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTGCATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATGCGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGTATGGTTTAGGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAACACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTA-TTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAAGCCTCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTATCATTTCGCCAATGTTTAAAAAAATTATACTACAATCACCCCATTTGCAAACTTTACATAACTGCGTATGGAAACCAGCAAAGAACACAAAACAATACTGATATTCAACTATCGAAGCTAATGGAGAAAAACTAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATACACCTACACAAACCTACAGACAAACAAACACATACACCAGCATATGC] [+] EMBL BM632046 [CCGAGCTGAGCAAGTTCGAGACGGAGCACTCGATCAGCTTCATCCCGCCGGACGGTGAGTTCGAGCTGATGCGCTACCGCACCACCAAGGACATCTCGCTGCCATTCCGGGTGATCCCGCTGGTGCGGGAGGTCGGCCGGACCAAGATGGAGGTGAAGGTGGTGCTCAAGTCGAACTTCAAGCCGTCGCTGCTCGGGCAGAAGATTGAGGTGAAGATACCGACGCCGCTGAACACGTCCGGCGTGCAGCTGATCTGCCTGAAGGGCAAGGCGAAGTACAAGGCGTCCGAGAATGCGATCGTATGGAAAATTAAACGTATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCATTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGTTGCTAAGACACAAACCCCGCAAAGGAATGACTCCCAATACGCCTC AGATTCTGTTGCTCTTCTTATTATACAAATTTTCAAG ] [+] EMBL BM609974 [ CCG CGCCGCTGAACACGTCCGGCGTGCAGCTGATCTGTCTGAAGGGCAAGGCGAAGTACAAGGCGTCCGAGAATGCGATCGTATGGAAAATTAAACGCATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACA CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTT ] [+] EMBL BM608081 [ ccgATGCGATCGTATGGAAAATTAAACGCATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACA CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGACAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAAGTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCC ] [+] EMBL BM604263 [ ccgATTGAACTGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACA CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGACAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAAGTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAGAAAAGCGTTAAGCAGCGGGGCGGTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTC ] [+] EMBL BM607590 [ ccGCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGTTCCATTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGTTGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTC AGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACACA CACACCCCTA ] [+] EMBL BM647754 [ cCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAACTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGAAACGCGATGCTAAGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACACATC CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAATTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAG ] [+] EMBL BM625821 [ ccGACACAAA CCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACACATC CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAATTTATTCTATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCA GCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGGTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATA ] [+] EMBL BM582247 [ ccgGGAATGACTCCCAATACGCCTCAGAGATTCTGTTGCTCTTCTTATTATACAAA TTTCAAGCCCTCACACACACACACACATC CCCCTATCCCTGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTGTTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTCCCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTGTAGAGAAATTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGATACGCAAACCACGTAG AAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCA GCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTAT ] [+] EMBL BM575570 [ ccGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCAGCGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCATACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGTGCTTGTATTCGGAAGCCGCGAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAACAAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTGCGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAGGAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGAGTTAGAGAAGAAAGGGTGGGAGTGCGTGTACAACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCACATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGGAAATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATC ] [+] EMBL BX618216 [ ACCAACTGGAGCTGTGCCGAATTTATTGCTTCTG TATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTGCATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATGCGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGTATGGTTTAGGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAACACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTA TTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAATCCTCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTATCATTTCGCCAATGTTTAAAAAAATTATACTACAATCACCCCATTTGCAAACTTTACATAACTGCGTATGGAAACCAGCAAAGAACACAAAACAATACTGATATTCAACTATCGAAGCTAAT ] [+] EMBL BX624955 [ CCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTGCATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATGCGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGTATGGTTTAGGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAACACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTA TTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAAGCCTCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTAT ] [+] EMBL BM582088 [ ccGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAAGTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTGCATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATG GAAGTAAAATT AACAAAAAGGGCAAGGCATTTCTGTTGAACGGAGTGTTACAAACGTATGGTTTAGGACGCGATAACTATAGGTTC TTTTTTTTGTGCGGTACAGAAACATGTAAACACGATTAAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTACTTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAAGCCTCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTATCATTTCGCCAATGTTTAAAAAAA TATACTACAATCACCCCATTTGCAAACTTTACATAACTGCGTATGGAAACCAGCAAAGAACACAAAACAATACTGATATTCAACTATCGAAGCTAATGGAGAAAAACTAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATACACCTACACAAACCTACAGACAAACAAACACATACACCAGCATATGC] [+] EMBL AGA282851 [ AATTTCAAAATGCAAATGCGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGTATGGTTTAAGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAACACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTAAAAATGATTA TTTTGTGTTTTGTTTGCACCATTGCATATAAAAATTAACATATAAAAGCCTCCTCAAGAACAAC ] consensusID : consensus_9378#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1055 fasta sequence [CCGCCCACGCGTCCGGGCGATACGCAAACCACGTAGAAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCAGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCATACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGGTGCTTGCATTCGGAAGCCGCGAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAACAAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTGCGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAGGAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGAGTTAGAGAAGAAGGGTGGAGCTAAAGGATTAGTTAGAAGTGGCATTGCGTGCTGTAGTGCGTGTACAACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCACATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGTATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATT] [+] EMBL BM650828 [CCGCCCACGCGTCCGGGCGATACGCAAACCACGTAGAAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACAATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGCCGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGCAACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGATGCATGTGCGAGCCAGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAGACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCATACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGGTGCTTGCATTCGGAAGCCGCGAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAACAAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTGCGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCG ] [+] EMBL BX619057 [ CGCTCGGGAGTGTAGCGGAGAGACCTCTAGTAGACGTAGTACGGACAAATTTCCGACTCCGGCACTAAAAAGCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAGGAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGAGTTAGAGAAGAAGGGTGGAGCTAAAGGATTAGTTAGAAGTGGCATTGCGTGCTGTAGTGCGTGTACAACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCACATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGTATATATGTATGTTCCCCTATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGCTACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAACATTTCACTACTGTATGCTGAATT] consensusID : consensus_9378#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 334 fasta sequence [AAACAATACTGATATTCAATTATCGAAGTTACTGGAGAAACACAAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATACCTACAGACAATCAAACACATACACAAGCATATGCTATAAATATATATAAATATAGTGAAAGGTGAACACAACATCATGAAAAACACACAAAATGACACCGTTGATAAGAATATAATAATATGACATGAATAATAATATTATTATTGCGTAAACTATTAAGATGATAAACTTAGTTGTTGAAAACAGAAGAAAGTAAAAGTCGATGAAAGTGAAAAAAAACGAAAAAAAA] [-] EMBL AGA281229 [AAACAATACTGATATTCAATTATCGAAGTTACTGGAGAAACACAAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATACCTACAGACAATCAAACACATACACAAGCATATGCTATAAATATATATAAATATAGTGAAAGGTGAACACAACATCATGAAAAACACACAAAATGACACCGTTGATAAGAATATAATAATATGACATGAATAATAATATTATTATTGCGTAAACTATTAAGATGATAAACTTAGTTGTTGAAAACAGAAGAAAGTAAAAGTCGATGAAAGTGAAAAAAAACGAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9378#0 CCGAGCTGAGCAAGTTCGAGACGGAGCACTCGATCAGCTTCATCCCGCCGGACGGTGAGT 60 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TCGAGCTGATGCGCTACCGCACCACCAAGGACATCTCGCTGCCATTCCGGGTGATCCCGC 120 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TGGTGCGGGAGGTCGGCCGGACCAAGATGGAGGTGAAGGTGGTGCTCAAGTCGAACTTCA 180 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 AGCCGTCGCTGCTCGGGCAGAAGATTGAGGTGAAGATACCGCGCCGCTGAACACGTCCGG 240 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 CGTGCAGCTGATCTGCCTGAAGGGCAAGGCGAAGTACAAGGCGTCCGAGAATGCGATCGT 300 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 ATGGAAAATTAAACGCATGGCCGGTATGAAGGAAACGCAGCTGTCGGCCGAAATTGAACT 360 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 GCTCGAAACGGATACCAAAAAGAAATGGACCCGGCCACCGATTTCGATGAACTTTGAGGT 420 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TCCGTTCGCACCATCCGGTTTCAAGGTCCGCTACTTAAAGGTATTCGAGCCGAAACTGAA 480 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 CTACTCCGATCATGATGTGATCAAATGGGTGCGCTACATCGGCCGCAGTGGACTGTACGA 540 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 AACGCGATGCTAAGACACAAACCCGCAAAGGAATGACTCCCAATACGCCTCAGAGATTCT 600 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 GTTGCTCTTCTTATTATACAAATTTCAAGCCCTCACACACACACACACACCCCCTATCCC 660 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TGTTGGATGTGTGTGTTTGAAGCAGAAAGTAAGCAAAAAGGTTTATTGCGCTCTTATTTG 720 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TTTGGTTACGATACACACACTGCTCTTTACTGCTGCCGATAAAAGGCTCCATCTCTTTTC 780 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 CCCGGTGCTTTCCGTTTAGGCAATGTAGCAAAATGACAAAACAGTGTTTTTCGGTTATTG 840 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TAGAGAAATTTATTCGATTCGATTTCAAGTACGTGCAAATTTTGTGTTTATTTTTGGCGA 900 consensus_9378#1 -----------------------------------CCGCCCACGCGTCCG-----GGCGA 20 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TACGCAAACCACGTAGAAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACA 960 consensus_9378#1 TACGCAAACCACGTAGAAAGCGTTAAGCAGCGGGGCGTTATCAGTCGAATATACAAAACA 80 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 ATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGC 1020 consensus_9378#1 ATAATGCAATCAGCAAGTACGTTCGGTCAGCCGACCTGCTGTTGCTGCTGCGGCTGCAGC 140 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 CGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGC 1080 consensus_9378#1 CGGACCGAATAAAAGTTAAAGTATGTTATTTCACTAAAGCCGAGAGCATAATTGACGAGC 200 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 AACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGAT 1140 consensus_9378#1 AACTAGTAGCAAGCTATCCGTGTTATAATCGAATCCATTGTGTATAAGCTGCACCATGAT 260 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 GCATGTGCGAGCCAGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAG 1200 consensus_9378#1 GCATGTGCGAGCCAGCGCGCGCCCGCTCGTCCATGTGTGTGTGTTTGTTAGGTTCCGTAG 320 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 ACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCAT 1260 consensus_9378#1 ACGATCCTATCGTAAACAAAAGTATAATATTTAGTATAGAAAAAGCATACTAAAGGGCAT 380 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 ACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCG-TGCTTGTATTCGGAAGCCGC 1319 consensus_9378#1 ACCCATTACGTTAATCCTGCTAGCGCTTTAAGGCGGCCGGTGCTTGCATTCGGAAGCCGC 440 consensus_9378#2 ----------------------------------AAACAATACTGATATTCAATTATCGA 26 * * ** **** ** consensus_9378#0 GAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAAC 1379 consensus_9378#1 GAAAGCGTGGCAATCCAACACGTACGGTCTCGGTCTTTTCGCCTGCGAGTGACGCTGAAC 500 consensus_9378#2 AGTTACTGGAGAAACACAAAAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAAC 86 * * ** * * * * *** * *** * * * *** consensus_9378#0 AAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTG 1439 consensus_9378#1 AAAACGCTAACGCCAAACATTGCATCTGTTTGCCGGACGAATCTCTTTGACCGTTTTGTG 560 consensus_9378#2 GAAATGCAAAAGC---ACATACCTACAGACAATCAAACACATACACAAGCATATGCTATA 143 *** ** ** ** **** * * * * ** ** * * * * consensus_9378#0 --CGCTCGGGAGTGTAGCGGAGAG--ACCTCTAGTAGACGTAGTACGGACAAATTTCCGA 1495 consensus_9378#1 --CGCTCGGGAGTGTAGCGGAGAG--ACCTCTAGTAGACGTAGTACGGACAAATTTCCGA 616 consensus_9378#2 AATATATATAAATATAGTGAAAGGTGAACACAACATCATGAAAAACACACAAAAT---GA 200 * * *** * * * * * * * * * * ** ***** * ** consensus_9378#0 CTCCGGCACTAAAAA-GCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAG 1554 consensus_9378#1 CTCCGGCACTAAAAA-GCATCTTTATTGCAAAAATGCCATCAGTAATCGTTGAGTAACAG 675 consensus_9378#2 CACCGTTGATAAGAATATAATAATATGACATGAATAATAATATTA-TTATTGCGTAA-AC 258 * *** *** ** * *** ** *** * * ** * *** **** * consensus_9378#0 GAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGA-GTTAGA 1613 consensus_9378#1 GAGCAAACTGACGACCGAACTCCCGGCTAGAACGCGAACACTGCAAAGCTTGA-GTTAGA 734 consensus_9378#2 TATTAAGATGATAAACTTAGTT---GTTGAAAACAGAAGAAAGTAAAAGTCGATGAAAGT 315 * ** *** * * * * * * ** *** * * *** * ** * ** consensus_9378#0 GAAGAAAGGGTGGG-----------------------------------AGTGCGTGTAC 1638 consensus_9378#1 GAAGAAGGGTGGAGCTAAAGGATTAGTTAGAAGTGGCATTGCGTGCTGTAGTGCGTGTAC 794 consensus_9378#2 GAAAAAAAACGAAAAAAAA----------------------------------------- 334 *** ** consensus_9378#0 AACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCA 1698 consensus_9378#1 AACTGATGGCAAAACTGGCAAACCATTCAGCAAGCGAACAACAACAACAACGGCGGGGCA 854 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 CATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGGAAATATATGTATGTTCCCCT 1758 consensus_9378#1 CATCTACCAACTGGAGCTGTGCCGAATTTATTGCTTCTGTA--TATATGTATGTTCCCCT 912 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 ATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGC 1818 consensus_9378#1 ATTCCTTCCCTCCCTACCCCTCTGTCTCATACTAAATCGTATCGCCATCCATTCCAATGC 972 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAAC 1878 consensus_9378#1 TACTTAGAGGTTCGAGATGTAGAGAACATACTCTCTGTTGTAGCTGGCGAAATTCCGAAC 1032 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 ATTTCACTACTGTATGCTGAATTGTATTGAGTGATTTCTTTGTTCTTTTATTGTTGGCTG 1938 consensus_9378#1 ATTTCACTACTGTATGCTGAATT------------------------------------- 1055 consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 CATCTGGCTACTATTATTACACAGAGTATTAGAGGTACGGAAAATTTCAAAATGCAAATG 1998 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 CGGAGCAAAATTTAAAGAAAAAGGGCCAGGCATTTCTGTTGAACGGAGTGTTATAAACGT 2058 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 ATGGTTTAGGACGCGATAACTATAGGTTCTTTTTTTTTGAGCGGTACAGAAACATGTAAA 2118 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 CACGATTCAAAACTGTATGCGATAAATTATTGAAATCAAAGTGAAAATTAAAAAGTCCTA 2178 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 AAAATGATTATTTTGTGTTTTGTTTGCAGCATTGCATATAAAAATTAAAATAAAAAAGCC 2238 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TCCTCAAGAACAACACATTAATTATTTGGCCAATGAACTACTAGTATCATTTCGCCAATG 2298 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 TTTAAAAAAATTATACTACAATCACCCCATTTGCAAACTTTACATAACTGCGTATGGAAA 2358 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 CCAGCAAAGAACACAAAACAATACTGATATTCAACTATCGAAGCTAATGGAGAAAAACTA 2418 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 AAAAGAAGAAGCGGCGAAGAAACAAGCGTGCAAACTTTAACGAAATGCAAAAGCACATAC 2478 consensus_9378#1 ------------------------------------------------------------ consensus_9378#2 ------------------------------------------------------------ consensus_9378#0 ACCTACACAAACCTACAGACAAACAAACACATACACCAGCATATGC 2524 consensus_9378#1 ---------------------------------------------- consensus_9378#2 ---------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||