These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9385#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1417 fasta sequence [CCGCGGACGCGTGGGCGCGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAAACGCGAAAAGAAAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCAGAATGACCCAATTGAAGCAAAAAAACAGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTTGCGGTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAG-AGAGTATACACACACAAAAAGGGAATGTAATTGAATGCAAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACTACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAGCTACGGACGCTA---TG---GA-GAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCA-AAC-AACTAATCACCAATCACAGCAACA-TAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGAGGACATGAAATCCAATTCTCTCCTATCGCTGCACCAGTTAGTGCCGCTTATAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCGAGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAATCCCGTATATACTACTCAGCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAAC----AAAAAAAAAAACACTGCAAGAGATTTAATAATATATTTTAGGTTAA-CAAAAACCAAAAAAANTNNCAACAAAAANGCAGCATGTG] [+] EMBL BM613579 [CCGCGGACGCGTGGGCGCGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAAACGCGAAAAGAAAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCAGAATGACCCAATTGAAGCAAAAAAACAGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTTGCGGTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAG AGAGTATACACACACAAAAAGGGAATGTAATTGAATGCAAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACTACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAGCTACGGACGCTA TG GA GAGGAAGAACCTGGAACCGGCCGGAT ] [+] EMBL BX616369 [ GTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAGTATA CACACACACACCAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCGCCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAGCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCA AAC AACTAATCACCAATCACAGCAACA TAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGAGGACATGAAA ] [+] EMBL BM594719 [ ccgGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCA AAC AACTAATCACCAATCACAGCAACA TAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGAGGACATGAAATCCAATTCTCTCCTATCGCTGCACCAGTTAGTGCCGCTTATAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCGAGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAATCCCGTATATACTACTCAGCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAAC AAAAAAAAAAACACTGCAAGAGATTTAATAATATATTTTA ] [-] EMBL BX466728 [ CCAGCTCGTCGTGGTAGGATGATTGATTGATAATCCNAAGC AGAGAGAGAGAGCANAACGAACTAATCACCAATCACAGCAACAGTAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAAAGAGAGGACCT TTCTCTTCTATCGCCGCACCAGTTAGTGCCGCTT CAGACTGTTCCGACAAGACCGAGCTGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCGAGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAGTCCCGTATGTACTACTCAGCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAACAACAAAAAAAAAAAACACTGCAAGAGATTTAATAATATATTTTAGGTTAACCAAAAACCAAAAAAANTNNCAACAAAAANGCAGCATGTG] [+] EMBL BM647859 [ ccgTAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGAGGACATGAAATCCAATTCTCTCCTATCGCTGCACCAGTTAGTGCCGCTTATAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCGAGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAATCCCGTATATACTACTCAGCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAAC AAAAAAAAAAACACTGCAAGAGATTTAATAATATATTTTAGGTTAA CAAAAACAAAAAcctcg ] consensusID : consensus_9385#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1337 fasta sequence [CTGGGGGTGAAGCATAAAAATCAAGTAAACAATAATTGTAATTTATTCCATCTCGAAAGGAGCTAATTGGCACGAATTCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCAGCCG-CCCCCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG---CA--AAAAAAAAA-CA-GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAG-TATA-CACACACACACAAAAAGGGAATGTAATTGAATGC-AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGA-TTTCGTCCAAACGCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGTTTTATTTCTTACCTAAATATCAAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGC--AGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCG-TTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGTTAGTGCCGCTTCAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACATGAAAC] [+] EMBL CNS095VE [CTGGGGGTGAAGCATAAAAATCAAGTAAACAATAATTGTAATTTATTCCATCTCGAAAGGAGCTAATTGGCACGAATTCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCAGCCG CCCCCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGTGCAGAAGCGTTGACACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG C AAAAAAAA CA GGGTAAATTGT ] [+] EMBL CNS097XU [ acGCATAAAAATCAAGTAAACAATAATTGTAATTTATTCCATCTCGAAAGGAGCTAATTGGCACGAATTCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCAGCCG CCCCCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG CA AAAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAG TATA CACACACACACAAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACAGTGAGTTAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTTTTTCTTCTTGCAAACTAGA TTTCGTCCAAACGCTT ] [-] EMBL CNS097XV [ TGCAATATAAAATAATACGGCAGCCGCCCCCCCCCCCGGCGCGTCCTTCCCACGGGAAATCGTGTGCGTAGTGAAAGAAATCATAAAGCAAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGAACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAAAACATAAAAACAAAAACCAACTTGCTCTAAAAAACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGGAGAAGCG TAACACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG CA AAAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAG TATA AAAAAACACACAAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACAGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGA TTTCGTCCAAACGCTTTTCCTTTCGACAGTTGAGAGTTTTCGTTTGCTTTTCTTTGTTTTATTTCTTACCTAAATATCAAATAAAAGC ] [+] EMBL BM610022 [ ccgGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACG TTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAGCAACA AAAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAGAGAGAGTATACACACACAAAAAGGGAATGTAATTGAATGCAAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGG C GAGTGAGAAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCTTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGT ] [-] EMBL CNS095VF [ GCAATATTTTTGAAGGTAGAACCCGGGGGCAGAAGCGTTGAAACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG C AAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTAAAGATAACTAGCAACAAAAAAGGGAAGAGAGAG TATA CACACACACACAAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGA TTTCGTCCAAACGCTTTTCCTTTCGACAGTTGAGAGTTTTCGTTTGCTTTTCTTTGTTTTATTTCTTACCTAAATATCAAATAAAAGCAGATTTTAGCACCACACAA ] [+] EMBL BX627495 [ GCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACG TTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAGCAACA AAAAAAAAACCAGGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTTGCGGTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAG TATA CACACACACACCAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCGCCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCA GCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCCAAAGC AGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACAT AAGACNATGAGCAAATACATGTTCTTTGTAAAGGNGGAGCGCCATGCAAGAACCG ] [+] EMBL BX612122 [ GCAGAAGCGTTGACACGTTCCGTTTACCCCTTCTGGCTTGAGACGTTTAAAAGGGAGAAAAGTCCCCCCAGAATGACCCAATTGAAG CAACAAAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTC ] [+] EMBL BX627906 [ AGAG TATA CACACACACACCAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCGCCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCA GCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGC AGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATAT ] [+] EMBL BX615071 [ GAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCGCCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCA GCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGC AGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCG TTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAG ] [+] EMBL CNS08GCW [ gATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGA TTTCGTCCAAACGCTTTTCCTTTCGACAGTTGAGAGTTTTCGTTTGCTTTTCTTTGTTTTATTTCTTACCTAAATATCAAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAAGTGGAGCACCATGCAAGAACCGATAAGCCCTAAAAAACCTAGAAATCCACGGCTTCTGATATCTTTCCGCGTTTGGAAACCGCACTAAATACCAATATTTAAAATTTGGGCCCACTCCCCTCTGAAAGGGGCTGAAAGAGTTAGTGCCGCTTCAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACATGAAAC] consensusID : consensus_9385#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 433 fasta sequence [GATCCCCGAGGTTAATCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCTGCCGCCTCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAGCAACAAAAAAAAA] [+] EMBL AL695043 [GATCCCCGAGGTTAATCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCTGCCGCCTCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAGCAACAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9385#1 CTGGGGGTGAAGCATAAAAATCAAGTAAACAATAATTGTAATTTATTCCATCTCGAAAGG 60 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 ------------------------------------------------------------ consensus_9385#1 AGCTAATTGGCACGAATTCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCA 120 consensus_9385#2 -GATCCCCGAGGTTAAT-CTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCA 58 consensus_9385#0 ------------------------------------------------------------ consensus_9385#1 ATATAAAATAATACGGCAGCCGCCCCCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGT 180 consensus_9385#2 ATATAAAATAATACGGCTGCCGCCTCCCC-ACGGCGCGTCCTTCCCACGGGCAATCGTGT 117 consensus_9385#0 ---------------------------CCGCGGACGCGTGG---GCGCGGGCAATCGTGT 30 ** * ***** * ************* consensus_9385#1 GCGTAGTGAAAGCAATCATAAAGCAAAAA-CGCGAAAAGAAAGAAGGGAGGCTGATAAGC 239 consensus_9385#2 GCGTAGTGAAAGCAATCATAAAGCAAAA--CGCGAAAAGAAAGAAGGGAGGCTGATAAGC 175 consensus_9385#0 GCGTAGTGAAAGCAATCATAAAGCAAAAAACGCGAAAAGAAA--AGGGAGGCTGATAAGC 88 **************************** ************ **************** consensus_9385#1 GATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATAC 299 consensus_9385#2 GATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATAC 235 consensus_9385#0 GATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATAC 148 ************************************************************ consensus_9385#1 AGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACA 359 consensus_9385#2 AGAAACTGAGTCAATGTTTAAAAACACATAAAA-CACACACCCACTTGCTCTAAAACACA 294 consensus_9385#0 AGAAACTGAGTCAATGTTTAAAAACACATAAAA-CACACACCCACTTGCTCTAAAACACA 207 ********************************* ************************** consensus_9385#1 CGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTT 419 consensus_9385#2 CGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTT- 353 consensus_9385#0 CGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTT- 266 *********************************************************** consensus_9385#1 CTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCA 479 consensus_9385#2 CGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCA 413 consensus_9385#0 CGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCC-AGAATGACCCA 325 * ********************************************** *********** consensus_9385#1 ATTGAAGCAAAAAAAAAACAGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTG 539 consensus_9385#2 ATTGAAGCAACAAAAAAAAA---------------------------------------- 433 consensus_9385#0 ATTGAAGCAAAAAAACAGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATT 385 ********** **** * consensus_9385#1 ATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCAT 599 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 CGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTTG 445 consensus_9385#1 TCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAGTATACACACACACACAAA 659 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 CGGTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAGAGAGTATACACACACAAAAAG 505 consensus_9385#1 AAGGGAATGTAATTGAATGCAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGG 719 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 GGAATGTAATTGAATGCAAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAG 565 consensus_9385#1 AGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGG 779 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 GGCAAACGTATACAAGAGCACGTTGGCGTCTCACTACACCACCAACACAGAGCGATGGAA 625 consensus_9385#1 AAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACGGTGAGTGAGGA 839 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 AAAGTTAAACTTTTCATTTTCCTTTAGTCAGCTACGGACGCTATGGAGAGGAAGAACCTG 685 consensus_9385#1 GGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTA 899 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 GAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCC 745 consensus_9385#1 GATTTCGTCCAAACGCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGTT 959 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 AAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTA 805 consensus_9385#1 TTATTTCTTACCTAAATATCAAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCA 1019 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 CCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTG 865 consensus_9385#1 GCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCAAACAAC 1079 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 GTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCAAACAACTAATCACCAA 925 consensus_9385#1 TAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGG 1139 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 TCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGC 985 consensus_9385#1 AGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCT 1199 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 AAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTT 1045 consensus_9385#1 TTCCGCGTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGA 1259 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 GGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTG 1105 consensus_9385#1 AAAGGACTGAACGAGTTAGTGCCGCTTCAGACTGTTCCGACAAGACCGAGCGGACGTTAA 1319 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 AACGAGAGGACATGAAATCCAATTCTCTCCTATCGCTGCACCAGTTAGTGCCGCTTATAG 1165 consensus_9385#1 GTTAAGAAAACATGAAAC------------------------------------------ 1337 consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 ACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCG 1225 consensus_9385#1 ------------------------------------------------------------ consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 AGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAATCCCGTATATACTACTCA 1285 consensus_9385#1 ------------------------------------------------------------ consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 GCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAACAAAAAAAAAAACA 1345 consensus_9385#1 ------------------------------------------------------------ consensus_9385#2 ------------------------------------------------------------ consensus_9385#0 CTGCAAGAGATTTAATAATATATTTTAGGTTAACAAAAACCAAAAAAANTNNCAACAAAA 1405 consensus_9385#1 ------------ consensus_9385#2 ------------ consensus_9385#0 ANGCAGCATGTG 1417 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||