These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9387#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1026 fasta sequence [GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA-ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC--GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC-AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA-GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTAAATACATTCGTACAGCCCCCGCAAACCAAAA] [+] EMBL CNS094GT [GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGC GTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTG ] [+] EMBL BX621060 [ AAACACAAAACCATCTGTGGTGGTTGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACNATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACT ] [+] EMBL CNS09JPE [ AAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGC GTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATT ] [+] EMBL BM599149 [ ccgAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGATTACGGTCCTGTGTTGTCTAATATATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAG ] [+] EMBL CNS08II8 [ CCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTG AGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGC GTGAAGGAAACGACAACCTTCCACATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCAAAAAAAGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTT ] [+] EMBL BM590933 [ ccgGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGCAAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATG ] [+] EMBL BM654113 [ ccGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCCGGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTG ] [+] EMBL BX617874 [ CATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAATGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AA ] [-] EMBL CNS08II9 [ GTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTG AGGCAAAACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA TTCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGATTAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAAACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTA ] [+] EMBL BM642708 [ ccgGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTT ] [+] EMBL BM655278 [ cCGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTGCAGTTGCCATTAGCAAATAGCGGTGAAT ] [-] EMBL CNS09JPF [ aCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAAAATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTTTGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTAAATACATTCGTACAGCCCCCGCAAACCAAAA] [-] EMBL CNS094GU [ GGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTTACTCAGTTGGATGAAGTTTTGAGTCATGACCGATTAAATATCGATT ] consensusID : consensus_9387#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 827 fasta sequence [CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGCATTTACCTTGGCTCGACTTAAACGATNCCCAAACCCCCGGTTCCTGGACTAGCAAACGCATCGGTGGCCTGCACCGCATCTGTTGCGCATATGTATTTTCATGTTGCTCNCCGNATGAGTCATCNTACCGGTGACCTACCCTATGCTGAGCCATTTAGCGGGTGTTGAAGTGAGAAGCACCGCATGTCACGGGGGCGCCGACCGGAAACCACATACNGCNACCATTTGCANAGGCNATCCAAACCCGACTAATTAGTAACTCAAGGTTGGTGAAGCTCNTGAG] [+] EMBL AL695012 [CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGCATTTACCTTGGCTCGACTTAAACGATNCCCAAACCCCCGGTTCCTGGACTAGCAAACGCATCGGTGGCCTGCACCGCATCTGTTGCGCATATGTATTTTCATGTTGCTCNCCGNATGAGTCATCNTACCGGTGACCTACCCTATGCTGAGCCATTTAGCGGGTGTTGAAGTGAGAAGCACCGCATGTCACGGGGGCGCCGACCGGAAACCACATACNGCNACCATTTGCANAGGCNATCCAAACCCGACTAATTAGTAACTCAAGGTTGGTGAAGCTCNTGAG] consensusID : consensus_9387#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 708 fasta sequence [CCGCCCACGCGTCCGTATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGGTTGGA] [+] EMBL BM587215 [CCGCCCACGCGTCCGTATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGGTTGGA] consensusID : consensus_9387#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence [ATGCAGAATCGCCCGAGGTAAAANGCTGGCAAACAAAACACAAAACATCTGTGGTGGTTGTTTTCTATTCGTGGCCATTCTGCAGCTTCCACCCATNTCGACTAGCTGTCCTTCGACTACGTGTCCTGTGTTGTCTAATATATAAATCCAAAGTGACTGCGGATTGCTTGCATCGATCTGCAAACTGTACCACTTGAGTAAGTGAGTATTCGGTGTAATTCTCCAGCAGCCCACACCTGCCTCATGCTCGTAACACTCATTCTCAAGNGGCAAGCACAACCGGAACAGAGAGCAACGACCGCNCGCGCGGTGAAGTGAAACTGACGAACTNTCCAATCTCACACCCGGAAGGAAAGAATGGTGTTGCGTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAATGTTCGGTGCCAGCGATCCTGGCTACAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGACGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGGGTGTGCCGGGTGGGGCAGGCAAGAA] [+] EMBL AL933209 [ATGCAGAATCGCCCGAGGTAAAANGCTGGCAAACAAAACACAAAACATCTGTGGTGGTTGTTTTCTATTCGTGGCCATTCTGCAGCTTCCACCCATNTCGACTAGCTGTCCTTCGACTACGTGTCCTGTGTTGTCTAATATATAAATCCAAAGTGACTGCGGATTGCTTGCATCGATCTGCAAACTGTACCACTTGAGTAAGTGAGTATTCGGTGTAATTCTCCAGCAGCCCACACCTGCCTCATGCTCGTAACACTCATTCTCAAGNGGCAAGCACAACCGGAACAGAGAGCAACGACCGCNCGCGCGGTGAAGTGAAACTGACGAACTNTCCAATCTCACACCCGGAAGGAAAGAATGGTGTTGCGTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAATGTTCGGTGCCAGCGATCCTGGCTACAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGACGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGGGTGTGCCGGGTGGGGCAGGCAAGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9387#0 GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGC 60 consensus_9387#2 ------------------------------------------------------------ consensus_9387#1 ---------------CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGC 45 consensus_9387#3 ------------------------------------------------------------ consensus_9387#0 AGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAA 120 consensus_9387#2 ---------------------------------------CCGCCCACGCGTCCGTATCAA 21 consensus_9387#1 AGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAA 105 consensus_9387#3 ------------------------------------------------------------ consensus_9387#0 TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACA 180 consensus_9387#2 TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTG----AGACAACA 77 consensus_9387#1 TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACA 165 consensus_9387#3 ------------------------------ATGCAGAATCGCCCGAGGTAAAANGCTGGC 30 **** * ** * * * consensus_9387#0 CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA 240 consensus_9387#2 CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA 137 consensus_9387#1 CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA 225 consensus_9387#3 AAACAAAACACAAAACATCTGTGGTGGTTGTTTTCTATTCGTGGCCATTCTGCAGCTTC- 89 *** * * * * ** * * * * * * * * ** ** consensus_9387#0 CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG 300 consensus_9387#2 CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG 197 consensus_9387#1 CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG 285 consensus_9387#3 CACCCATNTCGACTAGCTGTCCTTCGACTACGTGTC-CTGTGTTGTCTAATATATAAATC 148 ***** * * ** * * ** **** * ** * consensus_9387#0 TGGCACAAGTTCGTGCAGCCGATCCTGCTCAA-GTACTGGAACCCCTGGGAGAAGAAGGA 359 consensus_9387#2 TGGCACAAGTTCGTGCAGCCGATCCTGCTCAA-GTACTGGAACCCCTGGGAGAAGAAGGA 256 consensus_9387#1 TGGCACAAGTTCGTGCAGC-GATCCTGCTCAA-GTACTGGAACCCCTGGGAGAAGAAGGA 343 consensus_9387#3 CAAAGTGACTGCGGATTGCTTGCATCGATCTGCAAACTGTACCACTTGAGTAAGTGAGTA 208 * * ** ** * ** **** * * * ** * * ** * consensus_9387#0 TGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGAC---TGTGCCGGGGG 416 consensus_9387#2 TGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGAC---TGTGCCGGGGG 313 consensus_9387#1 TGCGGACGG-AACATGATCAAGACGGAGCCGAAAAATCCGTTCGAC---TGTGCCGGGGG 399 consensus_9387#3 TTCGGTGTAATTCTCCAGCAGCCCACACCTGCCTCATGCTCGTAACACTCATTCTCAAGN 268 * *** * * ** * * * * ** * ** * * * consensus_9387#0 GGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGG-CC 475 consensus_9387#2 GGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGGCC 373 consensus_9387#1 GGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCC-GGTCACGACCCGGTGGG-CC 457 consensus_9387#3 GGCAAGC--ACAACCGGAACAGAGAGCAACGA--CCGCNCG--CGCGGTGAAGTGAA-AC 321 ** ** * * *** ** * **** * * ** *** * consensus_9387#0 CGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGA 535 consensus_9387#2 CGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGA 433 consensus_9387#1 CGACGGTTGCCGCCGATACCGCAAC-TCCGACGCTGTCGACGATGCTGCCAGCAGCAAGA 516 consensus_9387#3 TGACGAACTNT-CCAATCTCACACC--CGGAAGGAAAGAATGGTGTTGC----------- 367 **** ** ** * ** * * ** * * * ** *** consensus_9387#0 AGACGCTATAGATAGACTCGATGGTCG-ATTTACTT--GCTCGACTTAAAC-ATCCCCAA 591 consensus_9387#2 AGACGCTATAGATAGACTCGATGGTCG-ATTTACTT--GCTCGACTTAAAC-ATCCCCAA 489 consensus_9387#1 AGACGCTATAGATAGACTCGATGGTCGCATTTACCTTGGCTCGACTTAAACGATNCCCAA 576 consensus_9387#3 --GTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAAT---GTTCGG 422 ** * * * * * *** ** ** * * *** * consensus_9387#0 ACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGC----TGCACCGCATCTGT-GCGCA 646 consensus_9387#2 ACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGC----TGCACCGCATCTGT-GCGCA 544 consensus_9387#1 ACCCCCGGTTCCTGGACTAGCAAACGCATCGGTGGCC---TGCACCGCATCTGTTGCGCA 633 consensus_9387#3 TGCCAGCGATCCTGG-CTA-CAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGA 480 ** * ****** *** *** * * ** * * * * * *** * consensus_9387#0 TATGTATTTTCATGT-GCTCACCGCATGAGTCATCT-ACCGCGTGCCTACC-TATGCTGA 703 consensus_9387#2 TATGTATTTTCATGT-GCTCACCGCATGAGTCATCT-ACCGCGTGCCTACC-TATGCTGA 601 consensus_9387#1 TATGTATTTTCATGTTGCTCNCCGNATGAGTCATCNTACCGGTGACCTACCCTATGCTGA 693 consensus_9387#3 CGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGG 540 * * * ** * * * ** * * ** * consensus_9387#0 GCA--TTAGCGGGTGTTTGAAGTGAGAAG------ACGATGTAGGGGGGC-GACCGGAAA 754 consensus_9387#2 GCA--TTAGCGGGTGTTTGAAGTGAGAAG------ACGATGTAGGGGGGC-GACCGGAAA 652 consensus_9387#1 GCCATTTAGCGGGTGTT-GAAGTGAGAAGCACCGCATGTCACGGGGGCGCCGACCGGAAA 752 consensus_9387#3 GTG---TGCCGGGTGGGGCAGGCAAGAA-------------------------------- 565 * * ****** * * **** consensus_9387#0 CCACATACAGCAAC-ATTTG--AAAGCAATCAAA--CCGACTA-TTAGTAACTCA-G-TT 806 consensus_9387#2 CCACATACAGCAAC-ATTTG--AAAGCAATCAAA--CCGACTA-TTAGTAACTCA-GGTT 705 consensus_9387#1 CCACATACNGCNACCATTTGCANAGGCNATCCAAACCCGACTAATTAGTAACTCAAGGTT 812 consensus_9387#3 ------------------------------------------------------------ consensus_9387#0 GGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGC 866 consensus_9387#2 GGA--------------------------------------------------------- 708 consensus_9387#1 GGTGAAGCTCNTGAG--------------------------------------------- 827 consensus_9387#3 ------------------------------------------------------------ consensus_9387#0 AAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCA 926 consensus_9387#2 ------------------------------------------------------------ consensus_9387#1 ------------------------------------------------------------ consensus_9387#3 ------------------------------------------------------------ consensus_9387#0 TTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTT 986 consensus_9387#2 ------------------------------------------------------------ consensus_9387#1 ------------------------------------------------------------ consensus_9387#3 ------------------------------------------------------------ consensus_9387#0 TAAATTTTAAATACATTCGTACAGCCCCCGCAAACCAAAA 1026 consensus_9387#2 ---------------------------------------- consensus_9387#1 ---------------------------------------- consensus_9387#3 ---------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||