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Anopheles gambiae
cluster # 9387 cluster # 9387       Sequences # 16       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9387#0 length = 1026 sequences # 13  
consensus_9387#1 length = 827 sequences # 1  
consensus_9387#2 length = 708 sequences # 1  
consensus_9387#3 length = 565 sequences # 1  

consensusID : consensus_9387#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1026
fasta sequence
                              [GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA-ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC--GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC-AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA-GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTAAATACATTCGTACAGCCCCCGCAAACCAAAA]

[+] EMBL CNS094GT             [GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGC GTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTG                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX621060             [           AAACACAAAACCATCTGTGGTGGTTGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACNATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09JPE             [                  AAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGC GTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATT                                  ]
[+] EMBL BM599149             [               ccgAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGATTACGGTCCTGTGTTGTCTAATATATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAG                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08II8             [                     CCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTG    AGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGC GTGAAGGAAACGACAACCTTCCACATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCAAAAAAAGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTT                                                                         ]
[+] EMBL BM590933             [                        ccgGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGCAAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATG                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM654113             [                              ccGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCCGGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTG                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX617874             [                                                    CATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAATGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AA                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS08II9             [                                                                                                     GTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTG    AGGCAAAACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA TTCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGATTAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAAACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTA                               ]
[+] EMBL BM642708             [                                                                                                                                                                                                    ccgGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTT                                                                                                                                                                                                                            ]
[+] EMBL BM655278             [                                                                                                                                                                                                                                                                                                                                                                             cCGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC  GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTGCAGTTGCCATTAGCAAATAGCGGTGAAT                                                                                 ]
[-] EMBL CNS09JPF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAAAATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTTTGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTAAATACATTCGTACAGCCCCCGCAAACCAAAA]
[-] EMBL CNS094GU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTTACTCAGTTGGATGAAGTTTTGAGTCATGACCGATTAAATATCGATT                                                                                                                                                                                      ]


>consensus_9387#0 GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGC AGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAA TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACA CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG TGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGAT GCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTG TGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACG GTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACG CTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGT TCCTGGACTAGCAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATG TGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTG AAGTGAGAAGACGATGTAGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAA TCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATC GATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACC GATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAA GTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTAAATACATTCGTACAGCCCCCGCAAA CCAAAA



consensusID : consensus_9387#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 827
fasta sequence
                              [CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGCATTTACCTTGGCTCGACTTAAACGATNCCCAAACCCCCGGTTCCTGGACTAGCAAACGCATCGGTGGCCTGCACCGCATCTGTTGCGCATATGTATTTTCATGTTGCTCNCCGNATGAGTCATCNTACCGGTGACCTACCCTATGCTGAGCCATTTAGCGGGTGTTGAAGTGAGAAGCACCGCATGTCACGGGGGCGCCGACCGGAAACCACATACNGCNACCATTTGCANAGGCNATCCAAACCCGACTAATTAGTAACTCAAGGTTGGTGAAGCTCNTGAG]

[+] EMBL AL695012             [CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGCATTTACCTTGGCTCGACTTAAACGATNCCCAAACCCCCGGTTCCTGGACTAGCAAACGCATCGGTGGCCTGCACCGCATCTGTTGCGCATATGTATTTTCATGTTGCTCNCCGNATGAGTCATCNTACCGGTGACCTACCCTATGCTGAGCCATTTAGCGGGTGTTGAAGTGAGAAGCACCGCATGTCACGGGGGCGCCGACCGGAAACCACATACNGCNACCATTTGCANAGGCNATCCAAACCCGACTAATTAGTAACTCAAGGTTGGTGAAGCTCNTGAG]


>consensus_9387#1 CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGCAGCTTCCACCCATTC GACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGG ATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAG CAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGA ATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTG CAGCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGAACATGAT CAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAA GAAGACAGCTGTGCCGCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCA ACTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGG TCGCATTTACCTTGGCTCGACTTAAACGATNCCCAAACCCCCGGTTCCTGGACTAGCAAA CGCATCGGTGGCCTGCACCGCATCTGTTGCGCATATGTATTTTCATGTTGCTCNCCGNAT GAGTCATCNTACCGGTGACCTACCCTATGCTGAGCCATTTAGCGGGTGTTGAAGTGAGAA GCACCGCATGTCACGGGGGCGCCGACCGGAAACCACATACNGCNACCATTTGCANAGGCN ATCCAAACCCGACTAATTAGTAACTCAAGGTTGGTGAAGCTCNTGAG



consensusID : consensus_9387#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 708
fasta sequence
                              [CCGCCCACGCGTCCGTATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGGTTGGA]

[+] EMBL BM587215             [CCGCCCACGCGTCCGTATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGGTTGGA]


>consensus_9387#2 CCGCCCACGCGTCCGTATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACG TACCACTTGAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACG ACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGC CCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACC CCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCG ACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACG ACCCGGTGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCT GCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAA CATCCCCAAACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGCTGCACCGCATCTGTG CGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTG AGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGCGACCGGAAACCACATAC AGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGGTTGGA



consensusID : consensus_9387#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 565
fasta sequence
                              [ATGCAGAATCGCCCGAGGTAAAANGCTGGCAAACAAAACACAAAACATCTGTGGTGGTTGTTTTCTATTCGTGGCCATTCTGCAGCTTCCACCCATNTCGACTAGCTGTCCTTCGACTACGTGTCCTGTGTTGTCTAATATATAAATCCAAAGTGACTGCGGATTGCTTGCATCGATCTGCAAACTGTACCACTTGAGTAAGTGAGTATTCGGTGTAATTCTCCAGCAGCCCACACCTGCCTCATGCTCGTAACACTCATTCTCAAGNGGCAAGCACAACCGGAACAGAGAGCAACGACCGCNCGCGCGGTGAAGTGAAACTGACGAACTNTCCAATCTCACACCCGGAAGGAAAGAATGGTGTTGCGTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAATGTTCGGTGCCAGCGATCCTGGCTACAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGACGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGGGTGTGCCGGGTGGGGCAGGCAAGAA]

[+] EMBL AL933209             [ATGCAGAATCGCCCGAGGTAAAANGCTGGCAAACAAAACACAAAACATCTGTGGTGGTTGTTTTCTATTCGTGGCCATTCTGCAGCTTCCACCCATNTCGACTAGCTGTCCTTCGACTACGTGTCCTGTGTTGTCTAATATATAAATCCAAAGTGACTGCGGATTGCTTGCATCGATCTGCAAACTGTACCACTTGAGTAAGTGAGTATTCGGTGTAATTCTCCAGCAGCCCACACCTGCCTCATGCTCGTAACACTCATTCTCAAGNGGCAAGCACAACCGGAACAGAGAGCAACGACCGCNCGCGCGGTGAAGTGAAACTGACGAACTNTCCAATCTCACACCCGGAAGGAAAGAATGGTGTTGCGTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAATGTTCGGTGCCAGCGATCCTGGCTACAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGACGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGGGTGTGCCGGGTGGGGCAGGCAAGAA]


>consensus_9387#3 ATGCAGAATCGCCCGAGGTAAAANGCTGGCAAACAAAACACAAAACATCTGTGGTGGTTG TTTTCTATTCGTGGCCATTCTGCAGCTTCCACCCATNTCGACTAGCTGTCCTTCGACTAC GTGTCCTGTGTTGTCTAATATATAAATCCAAAGTGACTGCGGATTGCTTGCATCGATCTG CAAACTGTACCACTTGAGTAAGTGAGTATTCGGTGTAATTCTCCAGCAGCCCACACCTGC CTCATGCTCGTAACACTCATTCTCAAGNGGCAAGCACAACCGGAACAGAGAGCAACGACC GCNCGCGCGGTGAAGTGAAACTGACGAACTNTCCAATCTCACACCCGGAAGGAAAGAATG GTGTTGCGTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAATGTTC GGTGCCAGCGATCCTGGCTACAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGA CGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGG GTGTGCCGGGTGGGGCAGGCAAGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9387#0      GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGC 60
consensus_9387#2      ------------------------------------------------------------
consensus_9387#1      ---------------CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGC 45
consensus_9387#3      ------------------------------------------------------------
                                                                                  

consensus_9387#0      AGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAA 120
consensus_9387#2      ---------------------------------------CCGCCCACGCGTCCGTATCAA 21
consensus_9387#1      AGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAA 105
consensus_9387#3      ------------------------------------------------------------
                                                                                  

consensus_9387#0      TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACA 180
consensus_9387#2      TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTG----AGACAACA 77
consensus_9387#1      TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACA 165
consensus_9387#3      ------------------------------ATGCAGAATCGCCCGAGGTAAAANGCTGGC 30
                                                     **** *    **    *    *  *    

consensus_9387#0      CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA 240
consensus_9387#2      CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA 137
consensus_9387#1      CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA 225
consensus_9387#3      AAACAAAACACAAAACATCTGTGGTGGTTGTTTTCTATTCGTGGCCATTCTGCAGCTTC- 89
                       ***   * * * * ** *    *  *     *         * * *   * **   ** 

consensus_9387#0      CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG 300
consensus_9387#2      CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG 197
consensus_9387#1      CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG 285
consensus_9387#3      CACCCATNTCGACTAGCTGTCCTTCGACTACGTGTC-CTGTGTTGTCTAATATATAAATC 148
                      *****      *  *   **       *   *  **  ****          * **  * 

consensus_9387#0      TGGCACAAGTTCGTGCAGCCGATCCTGCTCAA-GTACTGGAACCCCTGGGAGAAGAAGGA 359
consensus_9387#2      TGGCACAAGTTCGTGCAGCCGATCCTGCTCAA-GTACTGGAACCCCTGGGAGAAGAAGGA 256
consensus_9387#1      TGGCACAAGTTCGTGCAGC-GATCCTGCTCAA-GTACTGGAACCCCTGGGAGAAGAAGGA 343
consensus_9387#3      CAAAGTGACTGCGGATTGCTTGCATCGATCTGCAAACTGTACCACTTGAGTAAGTGAGTA 208
                             * * **    **       * **     **** * * * ** *  *   ** *

consensus_9387#0      TGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGAC---TGTGCCGGGGG 416
consensus_9387#2      TGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGAC---TGTGCCGGGGG 313
consensus_9387#1      TGCGGACGG-AACATGATCAAGACGGAGCCGAAAAATCCGTTCGAC---TGTGCCGGGGG 399
consensus_9387#3      TTCGGTGTAATTCTCCAGCAGCCCACACCTGCCTCATGCTCGTAACACTCATTCTCAAGN 268
                      * ***       *   * **   *  * * *    ** *     **     * *    * 

consensus_9387#0      GGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGG-CC 475
consensus_9387#2      GGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGGCC 373
consensus_9387#1      GGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCC-GGTCACGACCCGGTGGG-CC 457
consensus_9387#3      GGCAAGC--ACAACCGGAACAGAGAGCAACGA--CCGCNCG--CGCGGTGAAGTGAA-AC 321
                      **   **       * *   ***   ** *    ****  *  * **     ***    *

consensus_9387#0      CGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGA 535
consensus_9387#2      CGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGA 433
consensus_9387#1      CGACGGTTGCCGCCGATACCGCAAC-TCCGACGCTGTCGACGATGCTGCCAGCAGCAAGA 516
consensus_9387#3      TGACGAACTNT-CCAATCTCACACC--CGGAAGGAAAGAATGGTGTTGC----------- 367
                       ****       ** **  * ** *  * ** *      * * ** ***           

consensus_9387#0      AGACGCTATAGATAGACTCGATGGTCG-ATTTACTT--GCTCGACTTAAAC-ATCCCCAA 591
consensus_9387#2      AGACGCTATAGATAGACTCGATGGTCG-ATTTACTT--GCTCGACTTAAAC-ATCCCCAA 489
consensus_9387#1      AGACGCTATAGATAGACTCGATGGTCGCATTTACCTTGGCTCGACTTAAACGATNCCCAA 576
consensus_9387#3      --GTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAAT---GTTCGG 422
                          **    * *  * * * *** **   **          * *  ***       *  

consensus_9387#0      ACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGC----TGCACCGCATCTGT-GCGCA 646
consensus_9387#2      ACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGC----TGCACCGCATCTGT-GCGCA 544
consensus_9387#1      ACCCCCGGTTCCTGGACTAGCAAACGCATCGGTGGCC---TGCACCGCATCTGTTGCGCA 633
consensus_9387#3      TGCCAGCGATCCTGG-CTA-CAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGA 480
                        **   * ****** *** ***   * * **   *     *    * *    * *** *

consensus_9387#0      TATGTATTTTCATGT-GCTCACCGCATGAGTCATCT-ACCGCGTGCCTACC-TATGCTGA 703
consensus_9387#2      TATGTATTTTCATGT-GCTCACCGCATGAGTCATCT-ACCGCGTGCCTACC-TATGCTGA 601
consensus_9387#1      TATGTATTTTCATGTTGCTCNCCGNATGAGTCATCNTACCGGTGACCTACCCTATGCTGA 693
consensus_9387#3      CGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGG 540
                         * *   * **   *      *    *  **            *    *    ** * 

consensus_9387#0      GCA--TTAGCGGGTGTTTGAAGTGAGAAG------ACGATGTAGGGGGGC-GACCGGAAA 754
consensus_9387#2      GCA--TTAGCGGGTGTTTGAAGTGAGAAG------ACGATGTAGGGGGGC-GACCGGAAA 652
consensus_9387#1      GCCATTTAGCGGGTGTT-GAAGTGAGAAGCACCGCATGTCACGGGGGCGCCGACCGGAAA 752
consensus_9387#3      GTG---TGCCGGGTGGGGCAGGCAAGAA-------------------------------- 565
                      *     *  ******    * *  ****                                

consensus_9387#0      CCACATACAGCAAC-ATTTG--AAAGCAATCAAA--CCGACTA-TTAGTAACTCA-G-TT 806
consensus_9387#2      CCACATACAGCAAC-ATTTG--AAAGCAATCAAA--CCGACTA-TTAGTAACTCA-GGTT 705
consensus_9387#1      CCACATACNGCNACCATTTGCANAGGCNATCCAAACCCGACTAATTAGTAACTCAAGGTT 812
consensus_9387#3      ------------------------------------------------------------
                                                                                  

consensus_9387#0      GGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGC 866
consensus_9387#2      GGA--------------------------------------------------------- 708
consensus_9387#1      GGTGAAGCTCNTGAG--------------------------------------------- 827
consensus_9387#3      ------------------------------------------------------------
                                                                                  

consensus_9387#0      AAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCA 926
consensus_9387#2      ------------------------------------------------------------
consensus_9387#1      ------------------------------------------------------------
consensus_9387#3      ------------------------------------------------------------
                                                                                  

consensus_9387#0      TTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTT 986
consensus_9387#2      ------------------------------------------------------------
consensus_9387#1      ------------------------------------------------------------
consensus_9387#3      ------------------------------------------------------------
                                                                                  

consensus_9387#0      TAAATTTTAAATACATTCGTACAGCCCCCGCAAACCAAAA 1026
consensus_9387#2      ----------------------------------------
consensus_9387#1      ----------------------------------------
consensus_9387#3      ----------------------------------------
                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)