These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9390#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1041 fasta sequence [TATTTGAGCTAGCTTTATGTCTTACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGAGTAGATAGGCCC-AGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCA-TCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC-GGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCG-A-AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGAGATTTTTCGTAGATGCGGACGCGTGGGCGG] [+] EMBL CNS08VN9 [TATTTGAGCTAGCTTTATGTCTTACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGAGTAGATAGGCCC AGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCA TCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTTTGTAGGCCACGAGCAGCTTGCGGGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTGGGCAGGATGTTAAACCGTAAGTTGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTTTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTACTTGGCCTTGTTGCCTGCCCCGTCGCCCGTAACCACGATACGCACCTTGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTTTTTTTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTCCGTTTAGGTATACCGAACCGGTCATCAGTTTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATCAATCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGC ] [-] EMBL BX621983 [ CATCGGTCACCCCTGAGTAGATAGGCCC AGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCA TCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCTGTGTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTCGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAAATATTCCGAACCGGTCATCAGTCTGTACACCGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCG ] [-] EMBL CNS08VN8 [ CCCCTGAGTAGATAGGCCC AGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCA TCCCGTCACCTTTTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTTCATTTTTTCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCG AGAGCG TGCGCAATGTCCTCCTACTTGGCCTTGTTGCCTGCCCCGTCGCCCAAAAACACGATACGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATCCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAG ] [+] EMBL CNS08V7X [ GCCCAAGAAAGCG ACTTGGCGAACAGTACCACGGCAACGCACTCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTGGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTCACCACGATATGCACCTCGTACGATTTGCTGAGCCACTCCAGCACGTTCTGGATCTTTGAGGCGAGACCGTGC ] [-] EMBL BX620912 [ GTACTTGGCGAACAGTACCACGGCAACGCA TCCNGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCTGTGTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTCGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAAATATTCCGAACCGGTCATCAGTCTGTACACCGGACGTTGCGTTTTCGTGT AAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCTTCATCTAAATTCACAATCGAGANGGATTCGTCCGCAGCGAT ] [-] EMBL CNS08SEF [ CGAACAGTACCACGGCAACGCA TCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTAAATTCAACCCGTTCGTTTTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGAACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCGAA AGCG TGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATATGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGA ] [+] EMBL CNS08SEG [ TTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTTTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATATGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGAACGTTCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTTTTTACACTGGACGTTGCGTTTTCGTGTAAAGGTCAGTTATCTTTACCAGCTTCAAATTGCGTTGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGAAGGATTCGTCCGCAGCGATTTGCGTAACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGT ] [-] EMBL CNS08V7W [ ATCTTGCCCGTGTCCTTTATGCTCGCCTCG A AGCG TGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATATGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCACCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGAGATTTTTCGTAGAT ] [-] EMBL BX618714 [ g AGCGCTGCGCCATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCCCGGTACGCCCCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGTTCTTCGAGGCGAGTTCGTGCTCGGCGATGCGGGCACTGTTCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTACTCGCGGCGCTTTAGGTCTTCGTTTACATATTCCGAACCGGTCATCAGTCTGTACCCCGGACGTTGCGTTTTCGTGT ] [-] EMBL BM612963 [ CAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACTTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTCGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACCGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAATTCACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGCTCCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGAGATTTTTCGAAAGTGCGGACGCGTGGGCGG] consensusID : consensus_9390#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 855 fasta sequence [CGGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGCGGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCGAAGCG-TGCGCAATGTCCTCCTGTTTGGCCTTGTTGCCTGCCCCGTCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTATAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATG-TTTTTGCC-TTTTTGTTG-TGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCA-TTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGTTTGTTTT] [-] EMBL CNS08OEC [CGGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGCGGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCGAAGCG TGCGCAATGTCCTCCTGTTTGGCCTTGTTGCCTGCCCCGTCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTATAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATG TTTTTGCC TTTTTGTTG TGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCA TTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGTTTGTTTT] [+] EMBL CNS08OED [ TCCTTTCGCTGTTATTTTCACGCCGCCGAGCGGGCCTGAGTTTTTAGGCCACGAGCAGCTTGCGGTTCATTCAACCCGTTCGATGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTCCCGCCGGCAGTGGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTTTCCTTTATGCTCGCCTCGAAGCGCTGCGCAATGTCCTCCTGTTTGGCCTTGTTGCCTGCCCCGTCGTCAGCAGCTTGTCGCCCTTAACCGAGGGGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTTTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTA AGTTTACAATCGAGAGGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATG TTTTTGCC TTTTTGTTG TGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTT ] [-] EMBL CNS09MHB [ TGATGTTTTTTGCCTTTTTTGTTGTTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGC ] consensusID : consensus_9390#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 760 fasta sequence [TCTAACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGATTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTTTTTAGGCCAC-GAGCAGCTTGCGGTT-CATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGA] [+] EMBL CNS09MHC [TCTAACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGATTAGATAGGCCCAAAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTTATTTTCACGCCGCCGAGCGGGCCTGAATTTTTAGGCCACAGAGCAGCTTGCGGTTCCATTCAACCCGTTCGTTGTCT ] [-] EMBL CNS09E3X [ CTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCAC GAGCAGCTTGCGGTT CATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGA] [+] EMBL CNS09E3Y [ AGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTTTTTAGGCCAC GAGCAGCTTGCGGTT CATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTGGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGAGGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAAAAAAATGGC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9390#0 TATTTGAGCTAGCTTTATGTCTTACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCC 60 consensus_9390#2 -------------------TCTAACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCC 41 consensus_9390#1 -----------------------------------------------------------C 1 * consensus_9390#0 GGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCAC 120 consensus_9390#2 GGGTCATCGGTCACCCCTGATTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCAC 101 consensus_9390#1 GGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCAC 61 ******************** *************************************** consensus_9390#0 GGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCG 180 consensus_9390#2 GGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCG 161 consensus_9390#1 GGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCG 121 ************************************************************ consensus_9390#0 CTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGCGGTTC 240 consensus_9390#2 CTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTTTTTAGGCCACGAGCAGCTTGCGGTTC 221 consensus_9390#1 CTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGCGGTTC 181 ********************************* * ************************ consensus_9390#0 ATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACT 300 consensus_9390#2 ATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACT 281 consensus_9390#1 ATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACT 241 ************************************************************ consensus_9390#0 ACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCAC 360 consensus_9390#2 ACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCAC 341 consensus_9390#1 ACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCAC 301 ************************************************************ consensus_9390#0 AATCTTGCCCGTGTCCTTTATGCTCGCCTCGAAGCGCTGCGCAATGTCCTCCTGCTTGGC 420 consensus_9390#2 AATCTTGCCCGTGTCCTTTATGCTCG---------------------------------- 367 consensus_9390#1 AATCTTGCCCGTGTCCTTTATGCTCGCCTCGAAGCGTGCGCAATGTCCTCCTGTTTGGCC 361 ************************** consensus_9390#0 CTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACCTCGTACGATTTGCTGAGCCA 480 consensus_9390#2 ------------------------------------------------------------ consensus_9390#1 ------------------------------------------------------------ consensus_9390#0 CTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGT 540 consensus_9390#2 ----------------------------------------GCGATGCGGGCACTGATCGT 387 consensus_9390#1 ----------------------------------------TTGTTGCCTGCCCCG-TCGT 380 * *** ** * * **** consensus_9390#0 CAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCG 600 consensus_9390#2 CAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCG 447 consensus_9390#1 CAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCG 440 ************************************************************ consensus_9390#0 CTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGT 660 consensus_9390#2 CTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGT 507 consensus_9390#1 CTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGT 500 ************************************************************ consensus_9390#0 TTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCC 720 consensus_9390#2 TTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCC 567 consensus_9390#1 TTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCC 560 ************************************************************ consensus_9390#0 GGCCTCATCTA-AGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTG 779 consensus_9390#2 GGCCTCATCTA-AGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTG 626 consensus_9390#1 GGCCTCATCTATAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTG 620 *********** ************************************************ consensus_9390#0 GTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTT 839 consensus_9390#2 GTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTT 686 consensus_9390#1 GTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTT 680 ************************************************************ consensus_9390#0 TCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCC 899 consensus_9390#2 TCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCC 746 consensus_9390#1 TCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCC 740 ************************************************************ consensus_9390#0 AGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGA 959 consensus_9390#2 AGCTAGCAGGTGGA---------------------------------------------- 760 consensus_9390#1 AGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGA 800 ************** consensus_9390#0 TGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGAGATTTTTC 1019 consensus_9390#2 ------------------------------------------------------------ consensus_9390#1 TGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGTTTGTTTT----- 855 consensus_9390#0 GTAGATGCGGACGCGTGGGCGG 1041 consensus_9390#2 ---------------------- consensus_9390#1 ---------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||