These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9392#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1784 fasta sequence [CCGCAATAGAACAAATATCGCATAATTCCTCGTAAAAGCAAATGTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTGGATTGGTTATTTCGGAAAGGACTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA-CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT-GGAGTCG-CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCGAGCATTATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAGCTACGCTTCAAGCACCAGAAGCTGGAGGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGTCATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTCCTACAAGGCAAAATTGTGTGTAAAAAAAAGCAACGCAAGAAGATATTCAGGGATAAGTGCAAAGTGCAAGTTGAACCGAGCGAAGGTTTCGCTTAGAGCGGCTCATGCAGAAGTTTATGTTTTGAAATTGTTGGGTTTTTTTTAAAGCTAATGCTTATTTTGAAACTGTTTACATCCTTTTAAAGCGAGAAAGTGCATCACGCAGACAGTGAAACTAACGCCTAAAGTAATGCTTATATGTTACCTTCAGTATGCATGTGTTAAGCTCGATTCGTATG--TTTTTTTTGGGCTGGCAGAGTTGTCCTATATAATTGCAATGAAAAGCGATCTCGCAAGAGCGAGAA] [+] EMBL BM586871 [CCGCAATAGAACAAATATCGCATAATTCCTCGTAAAAGCAAATGTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTTGA TGGTTATTTCGGAAAGGTATTTAAGCTTAAAAAACGATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACC ] [+] EMBL CNS08JNA [ GTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTGGATTGGTTATTTCGGAAGGGACTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAA GACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCT ] [+] EMBL CNS08GKN [ GTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTGGATTGGTTATTTCGGAAAGGACTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAA GACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGGTAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCCCCGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAA ] [+] EMBL AL930792 [ GTTATTTCGGAAAGGACTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTCGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCGCCAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCT ] [+] EMBL BX628193 [ CTTTAAGCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCATATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAG ] [+] EMBL BM642506 [ ccgAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTTTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCACCCAAGGCGTACAAGGTCAATCCGCGCATCAAGTTTGAGGTGGTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGATGGGAGTCG CAGCGGGACATACACTCACGGGCGACGGACGATCTGCTCGATGCCGGGCTG ] [+] EMBL BX620313 [ TGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAG ] [+] EMBL BX605072 [ AGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTC ] [+] EMBL BM655951 [ ccgGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATACACTCGCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCG ] [-] EMBL CNS08GKO [ CTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGAACTGACGAAGCTGAACCAAACCGTCA CCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCATCCACAAGGTGGACGGGGTGAGCGATGACTTTAAGAT GGAGTCG CAGCGGGATATAAACTCGCGGGCAACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTGCCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGAACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGAATGGGTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTCATTTAACCAGAGCTCGAGCATTATC ] [+] EMBL BX618505 [ ATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCGAGCATTATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCcg ] [+] EMBL BX609631 [ AGGGTGTCCATCTGAACTTTCACCTTACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAATTCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGAAAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGTGGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTGCATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCGAGCATTATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAGCTACGCTTCAAGCACCAGAAGCTGGAGGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGTCATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTCCTACAAGGCAA ] [-] EMBL CNS08JNB [ CTCCCGGGACAATCCGGATGTGCCGGCGTCCCACAACCAAAGCTCGAGCATTATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAG TACGCTTCAAGCACCAGAAGCTGGAGGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGTCATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTCCTACAAGGCAAAATTGTGTGTAAAAAAAAGCAACGCAAGAAGATATTCAGGGATAAGTGCAAAGTGCAAGTTGAACCGAGCGAAGGTTTCGCTTAGAGCGGCTCATGCAGAAGTTTATGTTTTGAAATTGTTGGGTTTTTTTTAAAGCTAATGCTTATTTTGAAACTGTTTACATCCTTTTAAAGCGAGAAAGTGCATCACGCAGACAGTGAAACTAACGCCTAAAGTAATGCTTATATGTTACCTTCAGTATGCATGTGTTAAGCTCGATTCGTATG TTTTTTTTGGGCTGGCAGAGTTGTCCTATATAATTGCAATGAAAAGCGATCTCGCAAGAGCGAGAA] [+] EMBL BM639012 [ ccgAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCTGGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCTGTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAGCTACGCTTCAAGCACCAGAAGCTGGAGGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGTCATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTCCTACAAGGCAAAATTGTGTGTAAAAAAAAGCAACGCAAGAAGATATTCAGGGATAAGTGCAAAGTGCAAGTTGAACCGAGCGAAGGTTTCGCTTAGAGCGGCTCATGCAGAAGTTTATGTTTTGAAATTGTTGGGTTTTTTTTAAAGCTAATGCTTATTTTGAAACTGTTTACATCCTTTTAAAGCGAGAAAGTGCATCACGCAGACAGTGAAACTAACGCCTAAAGTAATGCTTATATGTTACCTTCAGTATGCATGTGTTAAGCTCGATTCGTATGTTTTTTTTTTGGGCTGGAAGAGTTGT ] consensusID : consensus_9392#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 693 fasta sequence [CCGCCCACGCGTCCGCGTAAAAGCAAATGTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTTGATGGTTATTTCGGAAAGGTATTTAAGCTTAAAAAACGATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCACCAAGGCGTACAAGGTCAATCCGCGCATCAAGTTT] [+] EMBL BM645592 [CCGCCCACGCGTCCGCGTAAAAGCAAATGTTCTGTGAAGTAAATCGTTTGTGAATGCTTGTTAATTTTGTTTTTATTTGATGGTTATTTCGGAAAGGTATTTAAGCTTAAAAAACGATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGTTTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCATCCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAACAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTTTCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTGCGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCTGAACCAAACCGTCACCAAGGCGTACAAGGTCAATCCGCGCATCAAGTTT] [+] EMBL CNS08ZM0 [ GAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGACGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAGATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGGATCGTTTCCGAA GACTTTGGGTACGGGGAC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9392#0 CCGCAATAGAACAAATATCGCATAATTCCTCGTAAAAGCAAATGTTCTGTGAAGTAAATC 60 consensus_9392#1 ---------------CCGCCCACGCGTCCGCGTAAAAGCAAATGTTCTGTGAAGTAAATC 45 * ** *** ****************************** consensus_9392#0 GTTTGTGAATGCTTGTTAATTTTGTTTTTATTGGATTGGTTATTTCGGAAAGGACTTTAA 120 consensus_9392#1 GTTTGTGAATGCTTGTTAATTTTGTTTTTATTTGAT-GGTTATTTCGGAAAGGTATTTAA 104 ******************************** *** **************** ***** consensus_9392#0 GCCTAAAAAACTATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGA 180 consensus_9392#1 GCTTAAAAAACGATAGTGAAAAAGGACAAAACTCTTGGGGGCGATCGTACGGATTCGCGA 164 ** ******** ************************************************ consensus_9392#0 CGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAG 240 consensus_9392#1 CGTAATTGGTGTTGTGTTGGTTTAACTAATTGTGCCTGTTTGTTGTGTAGATAATATCAG 224 ************************************************************ consensus_9392#0 ATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGG 300 consensus_9392#1 ATTCCTTCTTACACTACTGTGTTAGAAAATGAGCTACCAGGATGAGGAAGAACAGGTGGG 284 ************************************************************ consensus_9392#0 ATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGT 360 consensus_9392#1 ATCGTTTCCGAAGGACTTTGGGTACGGGGACTTTGAGCATGAGAGTGACGGGAACCGGGT 344 ************************************************************ consensus_9392#0 TTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCAT 420 consensus_9392#1 TTCGGATGATAAGCCTCGAATACTGCTGATGGGGCTCCGGCGCTCCGGCAAGAGCTCCAT 404 ************************************************************ consensus_9392#0 CCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAA 480 consensus_9392#1 CCAGAAGGTGGTCTTCCACAAGATGTCCCCCAACGAAACGCTCTTCCTCGAGTCGACGAA 464 ************************************************************ consensus_9392#0 CAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTT 540 consensus_9392#1 CAAAATCGTCAAGGACGACATCAACAACAACAGCTTTGTGCAGTTCCAGATCTGGGACTT 524 ************************************************************ consensus_9392#0 TCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGTGGCTG 600 consensus_9392#1 TCCCGGGCAGATAGATTTCTTCGATCCGACGTTCGACTCGGACATGATTTTCGGCGGCTG 584 ****************************************************** ***** consensus_9392#0 CGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCT 660 consensus_9392#1 CGGGGCGCTCGTGTTCGTAATCGATGCGCAGGACGATTACGTCGAGGCACTGACGAAGCT 644 ************************************************************ consensus_9392#0 GAACCAAACCGTCACCAAGGCGTACAAGGTCAATCCGCGCATTAAGTTTGAGGTGTTCAT 720 consensus_9392#1 GAACCAAACCGTCACCAAGGCGTACAAGGTCAATCCGCGCATCAAGTTT----------- 693 ****************************************** ****** consensus_9392#0 CCACAAGGTGGACGGGGTGAGCGATGACTTTAAGATGGAGTCGCAGCGGGATATACACTC 780 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 GCGGGCGACTGACGATCTGCTCGATGCTGGGCTGGAGGGTGTCCATCTGAACTTTCACCT 840 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 TACCTCGATCTACGATCATTCGATCTTTGAGGCGTTCTCGAAGGTGGTGCAAAAGCTAAT 900 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 TCCTCAGCTGGCGGCACTCGAGAATCTGTTGAATCTGTTCATCCACAATTCGGGCATCGA 960 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 AAAGGCATTTCTGTTCGATGTGGTGTCGAAGATCTATATCGCAACCGATGCAACGCCGGT 1020 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 GGACATGCAAAGCTACGAGCTGTGCTGCGACATGATTGATGTGGTAATTGATCTTTCCTG 1080 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 CATCTATGGCTCCCGGGACAATCCGGATGTGCCGGCGTTCGACAACCAGAGCTCGAGCAT 1140 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 TATCAAAATGAACAACAGCACGGTGCTGTACCTGAGGGAGGTGAACAAATTCCTCGCCCT 1200 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 GGTGTGCATCATCCGGGAGGAAAGCTTCTCCCGGCAGGGTGTGATCGATTACAACTTCCT 1260 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 GTGCTTCCGGGAAGCGATCACGCAGGTGTTTGAGCTACGCTTCAAGCACCAGAAGCTGGA 1320 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 GGCCATCGAACAGGACTCGGACAATCTGGAGGACTTGCGAGATTTCGACCGAGAGGATGT 1380 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 CATATCCTCTATGAAGCGGTTCCAGGATTAAGGAGGAGCGACACATGGTGGTAAAGCTTC 1440 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 CTACAAGGCAAAATTGTGTGTAAAAAAAAGCAACGCAAGAAGATATTCAGGGATAAGTGC 1500 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 AAAGTGCAAGTTGAACCGAGCGAAGGTTTCGCTTAGAGCGGCTCATGCAGAAGTTTATGT 1560 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 TTTGAAATTGTTGGGTTTTTTTTAAAGCTAATGCTTATTTTGAAACTGTTTACATCCTTT 1620 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 TAAAGCGAGAAAGTGCATCACGCAGACAGTGAAACTAACGCCTAAAGTAATGCTTATATG 1680 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 TTACCTTCAGTATGCATGTGTTAAGCTCGATTCGTATGTTTTTTTTGGGCTGGCAGAGTT 1740 consensus_9392#1 ------------------------------------------------------------ consensus_9392#0 GTCCTATATAATTGCAATGAAAAGCGATCTCGCAAGAGCGAGAA 1784 consensus_9392#1 -------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||