These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9394#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1254 fasta sequence [ATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCAAGGAAATCAAGCTCCGTTTTGCGGTACGTGGGGAGGAATTGCCCAAGGGAAAGAAGATTACCGACCACATCATCATCGGCACGCCGGGCAAGCTGATGGACTGGGGCATCAAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTGCTGGACGAGGCGGACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGTCGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTGCCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCGATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTTCCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAACCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGGCTGGAAAAAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAGGTTACGATTGTGGTCAACTTTGATCTACCGATGGACCAGAGCGGTCGGGCTGATTGTGAAACCTATCTGCACCGAATCGGTCGCACNGGACGCTTCNGCAAGAACGGTATCGCCATCAATCTTGTCGACAGTGATCACAGCATGGAAATCTGTAGGACGATTGAGG-CCATTTCCAGAAAAANATTCAACTGCTGGATGCGGAAAATTCGGACGAAATTGAAAAGATTGGCTCCTAGACAAGCGGTGTAAGGGGGGTGGACTATGACCATGATTTCATAAGCGACGAAATTTTCAAAAAAAAAACTAGCTTGGCTCTAGATTTATTACTACTATTACGAGGAACTAAGCAGGAGTGCAAGGTTAGCATTATTACGCGCCGAGAAGCAAAACACTTCGAAGATGGAAAATAACAAACAATTGAAATTAATAAGGAATATTGCCGCTGCTACAGGTGGCTATTATTTTTTGTTGTTCGGAGAGGCATTTTACTTCCT] [+] EMBL BX606155 [ATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCAAGGAAATCAAGCTCCGTTTTGCGGTACGTGGGGAGGAATTGCCCAAGGGAAAGAAGATTACCGACCACATCATCATCGGCACGCCGGGCAAGCTGATGGACTGGGGCATCAAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTGCTGGACGAGGCGGACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGTCGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTGCCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCGATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTTCCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAACCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGGCTGGAAAAAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAG ] [+] EMBL BX622686 [ CCGGGCAAGCTGATGGACTGGGGCATCAAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTGCTGGACGAGGCGGACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGTCGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTGCCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCGATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTTCCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAACCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGGCTGGAAAAAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAGGTTACGATTGTGGTCAACTTTGATCTACCGATGGACCAGAGCGGTCGGGCTGATTGTGAAACCTATCTGCACCGAATCGGTCGCACNGGACGCTTCNGCAAGAACGGTATCGCCATCAATCTTGTCGACAGTGATCACAGCATGGAAATCTGTAGGACGATTGAGG CCATTTCCAGAAAAANATTCAACTGCTG ] [+] EMBL BX606777 [ AAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTGCTGGACGAGGCGGACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGTCGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTGCCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCGATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTTCCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAACCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCG ] [+] EMBL BX615250 [ ATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCGGCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGTCTGGAAAAAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAGGTTACGATTGTGGTGAACTTTGATCTACCGATGGACCAGAGCGGTCGGGCTGATTGTGAAACCTATCTGCACCGAATCGGTCGCACGGGACGCTTCGGCAAGAACGGTATCGCCATCAATCTTGTCGACAGTGATCACAGCATGAAAATCTGTAGGACGATTGAGGCCCATTTCCAGAAAAAGATTCAACTGCTGGATGCGGAAAATTCGGACGAAATTGAAAAGATTGGCTCCTAGACAAGCGGTGTAAGGGGGGTGGACTATGACCATGATTTCATAAGCGACGAAATTTTCAAAAAAAAAACTAGCTTGGCTCTAGATTTATTACTACTATTACGAGGAACTAAGCAGGAGTGCAAGGTTAGCATTATTACGCGCCGAGAAGCAAAACACTTCGAAGATGGAAAATAACAAACAATTGAAATTAATAAGGAATATTGCCGCTGCTACAGGTGGCTATTATTTTTTGTTGTTCGGAGAGGCATTTTACTTCCT] consensusID : consensus_9394#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 713 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTCGGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT-CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCT-TAAGCCGGAGCTGCTGCAGGGTGTG] [+] EMBL BM608748 [CCGCGGACGCGTGGGCGGACGCGTGGGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTCCTGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTAC GTGTGTGTATGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCTATAGGCAAAGACAAAGGAAGCGGGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGTTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTC ] [+] EMBL BM648494 [ cCGGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCT TAAGCCGGAGCTGCTGCAGGGTGTG] [+] EMBL BM593486 [ ccGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCT T ] [+] EMBL BM625169 [ ccgGGATGACGCTCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATTGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCT TAAGCCGGAGCTtg ] [+] EMBL BM633130 [ ccgTGACGCTCGCTCCTCGGCCTTTGGCTTCCTGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACTCCCCGGCTCACCGTTCGTAGTGAAACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACC TGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCTATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCTCCG ] [+] EMBL BM621686 [ ccgCGCTCCTACGCCTTTGGCTTCCGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAG ] [+] EMBL BM580575 [ ccgCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACTCCCCGGCTCACCGTTCGTAGTGAAACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACC TGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCTATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGTGAAGCAGCGGAACCAGCCGCTCCGGCCGTAAATGGTTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCT CGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTCAAAGCCGGAGCTGCTGC ] consensusID : consensus_9394#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 700 fasta sequence [CCGCGGACGCGTGGGCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGG] [+] EMBL BM621474 [CCGCGGACGCGTGGGCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGG] consensusID : consensus_9394#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 672 fasta sequence [CCGCGGACGCGTGGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCAAAGCCAGTCGGGCACGGGTAAGACGGCCGCCTTCGTGCTGGCCATGTTGAGTCGCGTCGATCCGCGCAAACCCTACCCGCAGGTGATCTGCC-TCTCGCCGACGTACGAGCTGGCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCA] [+] EMBL BM591347 [CCGCGGACGCGTGGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCAAAGCCAGTCGGGCACGGGTAAGACGGCCGCCTTCGTGCTGGCCATGTTGAGTCGCGTCGATCCGCGCAAACCCTACCCGCAGGTGATCTGCC TCTCGCCGACGTACGAGCTGGCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCA] [+] EMBL BM586506 [CCGCCCACGCGT CCG CACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAAATCGTTCGAGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGTCCTTCCGACACTGCTGGCCGATCCGCCACAGAACATGATCGCCCAAAGCCAGTCGGGCACGGGTAAGACGGCCGCCTTCGTGCTGGCCATGTTGAGTCGCGTCGATCCGCGCAAACCCTACCCGCAGGTGATCTGCCTTCTCGCCGACGTAC ] consensusID : consensus_9394#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 564 fasta sequence [CCGCGGACGCGTGGGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAA] [+] EMBL BM585827 [CCGCGGACGCGTGGGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACGAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCGGAAGCGTCGGGGGAAGCAGCGGAACCAGCCGCACCGGCCGTAAATGGGTCAGCAGGTTCGCCACCCTCAGTTGCCGGGTCCGAGGAGATCGAAACTGTCAACCCGGCCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGGTTTGGTCGAATCGAAGCTCGATCTCGAGGTGCAGCGTAAAGATCCATCCTCGCCGCTGCATTCGGTCAA] consensusID : consensus_9394#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 396 fasta sequence [CCGCCCACGCGTCCGGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACTAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCTGAAGCGTCGGGGGAAGCAGCG] [+] EMBL BM622688 [CCGCCCACGCGTCCGGTTTTTTCTTCGTGCATTTCTAGTGCAAATTCACGAAAGAAAACACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCGGACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATCACCGGGTAATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACACAACGATGGCGGACACGGCCACAGAGAGCACCAATGCAAGCGCTGCCACTGCTGCGGCTGCCGCTACTAACTGGGTGCAGAAGACGGAAGATCAGGAAATATCGAATCTGGTGGACAGTCTCGCCATAGGCAAAGACAAAGGAAGCGCGGAGAGCAATCCTGAAGCGTCGGGGGAAGCAGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9394#1 CCGCGGACGCGTGGGCGGACGCGTCGGCCGGATGACGCTCGCTCCTACGCCTTTGGCTTC 60 consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 --------------------------------------------------------CCGC 4 consensus_9394#3 ------------------------------------------------------------ consensus_9394#0 --------ATGGGATTCAACGCACCGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGC 52 consensus_9394#1 CGGGACCTTTTCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAG-T 119 consensus_9394#5 ----------------CCGCCCACGCGTCCGG----TTTTTTCTTCGTGCATTTCTAG-T 39 consensus_9394#4 --------------------------------------------CCGCGGACGCGTGGGT 16 consensus_9394#2 GGACGCGTGGGCCGCTTTTGCTTTGTGGCCAGAACGTTTTTTCTTCGTGCATTTCTAG-T 63 consensus_9394#3 ------------------------------------------------------------ consensus_9394#0 TGGCCGATCCGCCACAGAACATGATCGCCCATTCAGACCGGCGAAGTCGCGGCCAAGATG 112 consensus_9394#1 GCAAATTCACGAAAGAAAAC---ACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCG 176 consensus_9394#5 GCAAATTCACGAAAGAAAAC---ACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCG 96 consensus_9394#4 GCAAATTCACGAAAGAAAAC---ACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCG 73 consensus_9394#2 GCAAATTCACGAAAGAAAAC---ACCCCGGCTCACCGTTCCTAGTGACACGGCACTTGCG 120 consensus_9394#3 ------------------------------------------------------------ consensus_9394#0 GCCAAGTTCTGCAAGGAAATCAAGCTCCGTTTTGCGGTACGTGGGGAGGAATTGCCCAAG 172 consensus_9394#1 GACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATC-ACCGGGTA 235 consensus_9394#5 GACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATC-ACCGGGTA 155 consensus_9394#4 GACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATC-ACCGGGTA 132 consensus_9394#2 GACACAGCGTTGCGCAAAAACCACGTTTGCAGTACAGTGTGCAATTCCATC-ACCGGGTA 179 consensus_9394#3 ------------------------------------------------------------ consensus_9394#0 GGAAAGAAGATTACCGACCACATCATCATCGGCACGCCGGGCAAGCTGATGGACTGGGGC 232 consensus_9394#1 ATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACAC 295 consensus_9394#5 ATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACAC 215 consensus_9394#4 ATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACAC 192 consensus_9394#2 ATTGTGTGCGTACCTGTGTGTGTGTGTGTGCATCTCAAGCCTAGCATCCTAGCACAACAC 239 consensus_9394#3 ------------------------------------------------------CCGCGG 6 consensus_9394#0 ATCAAGTTCCGGGCGTTCGATCTGCGCAAGATCTCCGTGTTCGTG--CTGGACGAGGCGG 290 * consensus_9394#1 A-ACGATGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 349 consensus_9394#5 A-ACGATGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 269 consensus_9394#4 A-ACGATGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 246 consensus_9394#2 A-ACGATGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 293 consensus_9394#3 ACGCGTGGGCGGACAC----GGCCACAGAGAGCACCA-ATGCAAGCGCTGCCACTGCTGC 61 consensus_9394#0 ACGTGATGATTGCCACCCAGGGCCACCAGGATCAGTGCATCCGGATTCACAAGCAGCTGT 350 * * * * *** ****** ** ** ** * * * **** consensus_9394#1 GGCTGCCGCTACGAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 404 consensus_9394#5 GGCTGCCGCTACTAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 324 consensus_9394#4 GGCTGCCGCTACGAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 301 consensus_9394#2 GGCTGCCGCTACGAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 348 consensus_9394#3 GGCTGCCGCTACGAACTGGGTGCAG----AAGACGGAAGATCAGGAAAT-ATCGAATCTG 116 consensus_9394#0 CGTCGTCCTGCCAGATGATGTTCTTTTCCGCGACGTACGAAAAGGAGGTGATGGAGTTTG 410 * * * * * ** * **** * ** **** * ** ** * ** consensus_9394#1 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CG 455 consensus_9394#5 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CT 375 consensus_9394#4 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CG 352 consensus_9394#2 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CG 399 consensus_9394#3 GTGGACA-GTCTCGCCATAGGCAA-----AGACAAAGGAAGCGCGGAGAGCAATC---CG 167 consensus_9394#0 CCGAGTACATTGTGCCGAATCCCATCATTATACGGCTGGCCCGCGAGCAGGAATCGCTCG 470 * * * *** * * * * ** * **** ** **** * consensus_9394#1 GAAGCGTCGGGGGAAGCAGCG-GAACCAGCCGCACCGGCCGTAAATGGGTCAG--CAGGT 512 consensus_9394#5 GAAGCGTCGGGGGAAGCAGCG--------------------------------------- 396 consensus_9394#4 GAAGCGTCGGGGGAAGCAGCG-GAACCAGCCGCACCGGCCGTAAATGGGTCAG--CAGGT 409 consensus_9394#2 GAAGCGTCGGGGGAAGCAGCG-GAACCAGCCGCACCGGCCGTAAATGGGTCAG--CAGGT 456 consensus_9394#3 GAAGCGTCGGGGGAAGCAGCG-GAACCAGCCGCACCGGCCGTAAATGGGTCAG--CAGGT 224 consensus_9394#0 ATAACATCAAGCAGTACTATGTGAAGTGCAAAAATCAGGACGAAAAGTATCAGGCCATTT 530 * * ** * * * consensus_9394#1 TCGCCACCCTCAGT----TGCCGGGTC-CGAGGAGATCGAAA-CTGTCA-ACCCGG---- 561 consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 TCGCCACCCTCAGT----TGCCGGGTC-CGAGGAGATCGAAA-CTGTCA-ACCCGG---- 458 consensus_9394#2 TCGCCACCCTCAGT----TGCCGGGTC-CGAGGAGATCGAAA-CTGTCA-ACCCGG---- 505 consensus_9394#3 TCGCCACCCTCAGT----TGCCGGGTC-CGAGGAGATCGAAA-CTGTCA-ACCCGG---- 273 consensus_9394#0 CCAACATCTATGGTGTGATAACGGTTGGCCAAGCGATCATTTTCTGTCATACACGAAAAA 590 consensus_9394#1 CCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGG---TTTGGTCGAATCGAAGCTCG 618 consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 CCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGG---TTTGGTCGAATCGAAGCTCG 515 consensus_9394#2 CCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGG---TTTGGTCGAATCGAAGCTCG 562 consensus_9394#3 CCGATGCCAGTTTGCTGATGAAAATCATTCGCAAGGG---TTTGGTCGAATCGAAGCTCG 330 consensus_9394#0 CCGCTGGCTGGTTGTCGGGTAAAATGACTCAGGATGGACATTCGGTGGCCGTGCTGTCCG 650 consensus_9394#1 ATCT-CGAGGTGCAGCGTAAAGATCCATCCTCGCCGCT-GCATTCG-GTCAAATCGTTCG 675 consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ATCT-CGAGGTGCAGCGTAAAGATCCATCCTCGCCGCT-GCATTCG-GTCAA-------- 564 consensus_9394#2 ATCT-CGAGGTGCAGCGTAAAGATCCATCCTCGCCGCT-GCATTCG-GTCAAATCGTTCG 619 consensus_9394#3 ATCT-CGAGGTGCAGCGTAAAGATCCATCCTCGCCGCT-GCATTCG-GTCAAATCGTTCG 387 consensus_9394#0 GCGAACTGACCGTCGAGCAACGACTGGCCGTGTTAGATCGCTTCCGTGCTGGGCTGGAAA 710 consensus_9394#1 AGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTG---------------------- 713 consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 AGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCAC 679 consensus_9394#3 AGGCGCTGCACCTTAAGCCGGAGCTGCTGCAGGGTGTGTACGCGATGGGATTCAACGCAC 447 consensus_9394#0 AAGTACTCATTACCACGAACGTGCTGTCTAGAGGAATCGACGTCGAGCAGGTTACGATTG 770 consensus_9394#1 ------------------------------------------------------------ consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 CGTCCAAGATCCAGGAGACGG--------------------------------------- 700 consensus_9394#3 CGTCCAAGATCCAGGAGACGGCCCTTCCGACACTGCTGGCCGATC-CGCCACAGAACATG 506 consensus_9394#0 TGGTCAACTTTGATCTACCGATGGACCAGAGCGGTCGGGCTGATTGTGAAACCTATCTGC 830 consensus_9394#1 ------------------------------------------------------------ consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 ------------------------------------------------------------ consensus_9394#3 ATCGCCCAAAGCCAGTCGGGCACGGGTAAGACGGCCGCCTTCGTGCTGGCCATGTTGAGT 566 consensus_9394#0 ACCGAATCGGTCGCACNGGACGCTTCNGCAAGAACGGTATCGCCATCAATCTTGTCGACA 890 consensus_9394#1 ------------------------------------------------------------ consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 ------------------------------------------------------------ consensus_9394#3 CGCGTCGATCCGCGCAAACCCTACCCGCAGGTGAT-CTGCCTCTCGCCGACGTACGAGCT 625 consensus_9394#0 GTGATCACAGCATGGAAATCTGTAGGACGATTGAGGCCATTTCCAGAAAAANATTCAACT 950 consensus_9394#1 ------------------------------------------------------------ consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 ------------------------------------------------------------ consensus_9394#3 GGCCATTCAGACCGGCGAAGTCGCGGCCAAGATGGCCAAGTTCTGCA------------- 672 consensus_9394#0 GCTGGATGCGGAAAATTCGGACGAAATTGAAAAGATTGGCTCCTAGACAAGCGGTGTAAG 1010 consensus_9394#1 ------------------------------------------------------------ consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 ------------------------------------------------------------ consensus_9394#3 ------------------------------------------------------------ consensus_9394#0 GGGGGTGGACTATGACCATGATTTCATAAGCGACGAAATTTTCAAAAAAAAAACTAGCTT 1070 consensus_9394#1 ------------------------------------------------------------ consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 ------------------------------------------------------------ consensus_9394#3 ------------------------------------------------------------ consensus_9394#0 GGCTCTAGATTTATTACTACTATTACGAGGAACTAAGCAGGAGTGCAAGGTTAGCATTAT 1130 consensus_9394#1 ------------------------------------------------------------ consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 ------------------------------------------------------------ consensus_9394#3 ------------------------------------------------------------ consensus_9394#0 TACGCGCCGAGAAGCAAAACACTTCGAAGATGGAAAATAACAAACAATTGAAATTAATAA 1190 consensus_9394#1 ------------------------------------------------------------ consensus_9394#5 ------------------------------------------------------------ consensus_9394#4 ------------------------------------------------------------ consensus_9394#2 ------------------------------------------------------------ consensus_9394#3 ------------------------------------------------------------ consensus_9394#0 GGAATATTGCCGCTGCTACAGGTGGCTATTATTTTTTGTTGTTCGGAGAGGCATTTTACT 1250 consensus_9394#1 ---- consensus_9394#5 ---- consensus_9394#4 ---- consensus_9394#2 ---- consensus_9394#3 ---- consensus_9394#0 TCCT 1254 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||