These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9404#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1825 fasta sequence [TTTTGTTTTGTTTGGACCGTTCTCCATCTA-TTTGTATGTTCTCTCTATACAGTTTCCAACTTCACGCACACCAAAAG-ACCAAATTGTAATATTACAAGAGCATTTAACCAATCGTTTGCACTGCTTTTCAATAAAGTTCTAACTGCATAATGCAACCGCGGATCAAACATTTTGCCATCTTTCTGTTTATC-GGATATTTATGTACTATTTGCT-GGCCACATTTGTTTTTTTTTTAATGATAATTACTTATCAA-GAAAACTA-GGTTAATA-GACC-GATGTTTTGCTGAAGGAAACATGTTCAAGTGTAACGCGGTTCCGTCACCTTTTTCTATGCTGCCATTCACTCATGTTCGTGTTATGATCTCTCATCATTTGTAAAGCTCCAGCAAACATT-AAAAAAGACATCTATTTTGCCAAACTCTCGGAGCTGGGTTTCAATTGGCTGAGATATAATTGATACTTGAAT---AAGAAGAAAAAACAGGAAGGAAACGAAATAAACAAGGATCTGATCGATCGTACCCTACAACGAATGAATCATTGAGCTTGCCTCACGATCACTACGATGATGGAGATTTTAACGCAAAAGTCAAACAGCAACAAATGAAGAAAACATATTGAAATTACGTTCAATACCTTTCAACTGAGCGCTTTAACCGTACTATGACATCAAACTGTAAGCGTATGCCATCGGCCGAATGGAGGGATGTGGCGAATCTGCGTAGGTAGTGAACTTCGGCGTCAAATCATTCCCTTTCAGTGTGATGAATGCTCCCAGATTCTTCATTTGATCGCAATAATTAGGTGCCGAAAAGACGGTTATGCATTTGCCGTTATGGTCCACCTCGTAACCCTCCGCCTTGACCTCGTGGCTGCGAATGATGTAGTCCAGATTGTTGTACTTCAGGAATGCCTCCGTTACATCGGGGCCGAACTGTATGCCGACGCCGCGC-TTCGACGGTACGCGCCCGGG-CAGGGGATGCGGATCGGACCACAGCAGTTCGCACATCAGGCCCTCCTCCGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTCGAGAACAGCCCGCCGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAGTGGCAGCCAGTTGTACACGAGCGTAAACATGTCGGCCATGTTTTGCGAGTACTTCGAAACCACCTCGCCGGTAAAACCGTACAGCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGCGCGAGGAAGAAGTGGTTGGGGTATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGATGGCAAACCATTGATTTCGAATATATGTAGCAGGTCGTAGAACTGCCCATGGATATCGCCACACACTGTAAACTTTTGTTCGTCCGGCACTGGTATCTCCACCAGGGAGGGTTGCGTTTTCAGCAGCGTTTCCATATCGCAAAGAATCCTGTAGGCAAAGTTTTTATGCAGCTTGTTCTGCTTCTTGTACCACTCAAGTAGACTCTTCATGAACTCCAGCGTTACCTTACCGTTTTCCAGCTTCGGTCCAGTGTAGTCATCCTCGATAGTTGCGAATTCCATATCACGGCACATTTTTTCCACGCTCTTTTCCTGATGCTGCACCGAGATGGCCTTCTCGAACGCGATCTTGTTGACCATCTTTTTGCACTCGGTGTACTTGTCCTGGGCATCCTTCGCGCTTGCCCACCGTTTCGCGACAAACTACAGGTCGGCTAGCGCCTTCTTGAACCTGCCGAGC] [+] EMBL CNS099L8 [TTTTGTTTTGTTTGGACCGTTCTCCATCTA TTTGTATGTTCTCTCTATACAGTTTCCAACTTCACGCACACCAAAAG ACCAAATTGTAATATTACAAGAGCATTTGGGGGGGGGGGTGCACTGCTTTTCAATAAAGCTCTAACTGCATAATGCAACCGCGGATCAAACATTTTGCCATCTTTCTGTTTATC GGATATTTATGTACTATTTGCT GGCCACATTTGTTTTTTT ATGATAATTACTTATCAA GAAAACTA GGTTAATA GACC GATGTTTTGCTGAAGGAAACATGTTCAAGTGTAACGCGGTTCCGTCACCTTTTTCTATGCTGCCATTCACTCATGTTCGTGTTATGATCTCTCATCATTTGTAAAGCTCCAGCAAACATTAAAAAAAGACATCTATTTTGCCAAATTCTCGGAGCTGGGTTTCAATTGGCTCTGATATAATTGATACTTGAATAAGAAGAAGAAAAAACAGGAAGGAAACGAAATAAACAAGGATCCGATCGATCGTACCCTACAACGAATGAATCATTGAGCTTGCCTCACGATCACTGCGATGATGGAGATATAAACGCAAAAGTCAAACAGCAACAAATGAAGAAAACATATTTAAATTACGTTCAATACCTTTCAACTGAGCGCTTTAACCGTACTATGACATCAAACTGTAAGCGTATGCCATCGGCCGA ] [+] EMBL CNS08EXL [ TCTCCATCTA TTTGTATGTTCTCTCTATACAGTTTCCAACTTCACGCACACCAAAAGCACCAAATTGTAATATTACAAGAGCATTTAACCAATCGTTTGCACTGCTTTTCAATAAAGTTCTAACTGCATAATGCAACCGCGGATCAAACATTTTGCCATCTTTCTGTTTATC GGATATTTATGTACTATTTGCT GGCCACATTTGTTTTTTTTTTAATGATAATTACTTATCAA GAAAACTA GGTTAATA GACC GATGTTTTGCTGAAGGAAACATGTTCAAGTGTAACGCGGTTCCGTCACTTTTTTCTATGCTGCCATTCACTCATGTTCGTGTTATGATCTCTCATCATTTGTAAAGCTCCAGCAAACATT AAAAAAGACATCTATTTTGCCAAACTCTCGGAGCTGGGTTTCAATTGGCTGAGATATAATTGATACTTGAAT AAGAAGAAAAAACAGGAAGGAAACGAAATAAACAAGGATCTGATCGATCGTACCCTACAACGAATGAATCATTGAGCTTGCCTCACGATCACTACGATGATGGAGATTTTAACGCAAAAGTCAAACAGCAACAAATGAAGAAAACATATTGAAATTACGTTCAATACCTTTCAACTGAGCGCTTTAACCGTACTATGACATCAAACTGTAAGCGTATGCCATCGGCCGAATGGAGGG ] [+] EMBL CNS09PW2 [ ATCTATTTTGTATGTTCTCTCTATACAGTTTCCAACTTCACGCACACCAAAAG ACCAAATTGTAATATTACAAGAGCATTTAACCAATCGTTTGCACTGCTTTTCAATAAAGTTCTAACTGCATAATGCAACCGCGGATCAAACATTTTGCCATCTTTCTGTTTATCGGGATATTTATGTACTATTTGCTGGGCCACATTTGTTTTTTTTTTAATGATAATTACTTATCAAGGAAAACTAGGGTTAATAGGACCGGATG ] [-] EMBL CNS08EXK [ TTTGCCAAACTCTCGGAGCTGGGTTTCAATTGGCTGAGATATAATTGATACTTGAAT AAGAAGAAAAAACAGGAAGGAAACGAAATAAACAAGGATCTGATCGATCGTACCCTACAACGAATGAATCATTGAGCTTGCCTCACGATCACTACGATGATGGAGATTTTAACGCAAAAGTCAAACAGCAACAAATGAAGAAAACATATTGAAATTACGTTCAATACCTTTCAACTGAGCGCTTTAACCGTACTATGACATCAAACTGTAAGCGTATGCCATCGGCCGAATGGAGGGATGTGGCGAATCTGCGTAGGTAGTGAACTTCGGCGTCAAATCATTCCCTTTCAGTGTGATGAATGCTCCCAGATTCTTCATTTGATCGCAATAATTAGGTGCCGAAAAGACGGTTATGCATTTGCCGTTATGGTCCACCTCGTAACCCTCCGCCTTGACCTCGTGGCTGCGAATGATGTAGTCCAGATTGTTGTACTTCAGGAATGCCTCCGTTACATCGGGGCCGAACTGTATGCCGACGCCGCGC TTCGACGGTACGCGCCCGGG CAGGGGATGCGGATCGGACCACAGCAGTTCGCACATCAGGCCCTCCTCCGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTCGAGAACAGCCCGCCGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAGTGGCAGCCAGTTGTACA ] [-] EMBL BM633411 [ GCCGTTATGGTCCACCTCGTAACCCTCCGCCTTGACCTCGTGGCTGCGAATGATGTAGTCCAGATTGTTGTACTTCAGGAATGCCTCCGTTACATCGGGGCCGAACTGTATGCCGACGCCGCGC TTCGACGGTACGCGCCCGGG CAGGGGATGCGGATCGGACCACAGCAGTTCGCACATCAGGCCCTCCTCCGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTCGAGAACAGCCCGCCGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAGTGGCAGCCAGTTGTACACGAGCGTAAACATGTCGGCCATGTTTTGCGAGTACTTCGAAACCACCTCGCCGGTAAAACCGTACAGCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGCGCGAGGAAGAAGTGGTTGGGGTATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGATGGCAAACCATTGATTTCGAATATATGTAGCAGGTCGTAGAACTGCCCATGGATATCGCCACACACTGTAAACTTTTGTTCGTCCGGCACTGGTATCTCCACCAGGGAGGGTTGCGTTTTCAGCAGCGTTTCCATATCGCAAAGAATCCcgg ] [-] EMBL BX623936 [ GAATGATGTAGTCCAGATTGTTGTACTTTAGGAATGCCTCCGTTACATCGGGGCCGAACTGTATGCCGACGCCGCGC TTCGACGGTACGCGCCCGGG CAGGGGATGCGGATCCGACCACAGCAGTTCGCACATCAGGCCCTCCTCCGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTCGAGAACAGCCCGCCGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAGTGGCAGCCAGTTGTACACGAGCGTAAACATGTCGGCCATGTTTTGCGAGTACTTCGAAACCACCTCGCCGGTAAAACCGTACAGCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGTGCGAGGAAGAAGTGGTTGGGGTATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGATGGCAAACCATTGATTTCGAATATATGTAGCAGGTCGTAGAACTGCCCATGGATATCGCCACACACTGTAAACTTTTGTTCG ] [-] EMBL BM607981 [ TACATCGGGGCCGAACTGTATGCCGACGCCGCGCTTTCGACGGTACGCGCCCGGG CAGGGGATGCGGATCGGACCACAGCAGTTCGCACATCAGGCCCTCCTCCGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTCGAGAACAGCCCGCCGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAGTGGCAGCCAGTTGTACACGAGCGTAAACATGTCGGCCATGTTTTGCGAGTACTTCGAAACCACCTCGCCGGTAAAACCGTACAGCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGCGCGAGGAAGAAGTGGTTGGGGTATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGATGGCAAACCATTGATTTCGAATATATGTAGCAGGTCGTAGAACTGCCCATGGATATCGCCACACACTGTAAACTTTTGTTCGTCCGGCACTGGTATCTCCACCAGGGAGGGTTGCGTTTTCAGCAGCGTTTCCATATCGCAAAGAATCCTGTAGGCAAAGTTTTTATGCAGCTTGTTCTGCTTCTTGTACCACTCAAGTAGACTCTTCATGAACTCCAGCGTTACgg ] [-] EMBL BM580059 [ GGTACGCGCCCGGGCCAGGGGATGCGGATCCGACCACAGCAGTTCGCACATCAGGCCCTCCTCCGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTCGAGAACAGCCCGCCGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAGTGGCAGCCAGTTGTACACGAGCGTAAACATGTCGGCCATGTTTTGCGAGTACTTCGAAACCACCTCGCCGGTAAAACCGTACAGCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGTGCGAGGAAGAAGTGGTTGGGGTATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGATGGCAAACCATTGATTTCGAATATATGTAGCAGGTCGTAGAACTGCCCATGGATATCGCCACACACTGTAAACTTTTGTTCGTCCGGCACTGGTATCTCCACCAGGGAGGGTTGCGTTTTCAGCAGCGTTTCCATATCGCAAAGAATCCTGTAGGCAAAGTTTTTATGCAGCTTGTTCTGCTTCTTGTACCACTCAAGcgg ] [-] EMBL CNS099L7 [ TTTGCGAGTACTTCGAAACCACCTCGCCGGTAAAACCGTACAGCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGCGCGAGGAAGAAGTGGTTGGGATATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGATGGCAAACCATTGATTTCGAATATATGTAGCAGGTCGTAGAACTGCCCATGGATATCGCCACACACTGTAAACTTTTGTTCGTCCGGCACTGGTATCTCCACCAGGGAGGGTTGCGTTTTCAGCAGCGTTTCCATATCGCAAAGAATCCTGTAGGCAAAGTTTTTATGCAGCTTGTTCTGCTTCTTGTACCACTCAAGTAGACTCTTCATGAACTCCAGCGTTACCTTACCGTTTTCCAGCTTCGGTCCAGTGTAGTCATCCTCGATAGTTGCGAATTCCATATCACGGCACATTTTTTCCACGCTCTTTTCCTGATGCTGCACCGAGATGGCCTTCTCGAACGCGATCTTGTTGACCATCTTTTTGCACTCGGTGTACTTGTCCTGGGCATCCTTCGCGCTTGCCC ] [-] EMBL AGA281148 [ GCGTTTCCATATGGCAAAGAATCCTGTAGGCAAAGTTTTTATGCAGCTTGTTTTGCTTCTTGTACCACTCAAGTAGACTCTTCATGAACTCCAGCGTTACCTTACCGTTTTCCAGCTTCGGTCCAGTGTAGTCATCCTCGATAGTTGCGAATTCCATATCACGGCACATTTTTTCCACGCTCTTTTCCTGATGGTGCACCGAGATGGCCTTCTCGAACGCGATCTTGTTGACCATCTTTTTGCACTCGGTGTACTTGTCCTGGGCATCCTTCGCGCTTGGGCACCGTTTCGCGACAAACTACAGGTCGGCTAGCGCCTTCTTGAACCTGCCGAGC] consensusID : consensus_9404#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 754 fasta sequence [TTTTTTTTGCTTTTGTTAACTGAACCGAACGCACGTGTATTTACTTTGCTCCGCATATCACATTTTCCTTTCGCTCTGCTTTTATTTCGGCGGGCAGAATCTCCGCCAGACAGTTGGTGACGGTGTAGAAGCAGTCCGGGATGCAGTCCCACATCTCGGAGAAGCAGGACAGGGACAGCGACATGGCCTGGTACATGCTGGCCGTCGTTTGGACGGCCGAGACGAGCATGTGCACCACCGGGCCAAGGATCGGGTAGATCAGATGGAGGATGGCTTCGAGCCACGGGGGTCGCTTCTGGTTCCACACCTGCCGCCGGTCCAGACAGGAGGCCCAATCGTTCATTTTGCTCTTCTCCAGGGCGGAGATGAGCGTCTTGTTGATGTCGGACGTCTTGCCCGCCATGATGACGATGTACGTGAGCCCCATCAGGACCTGGTAGTTGGACTGGCCGATCGGATCTAATGGAATAAGGGGAAAGTATTATAAAAAAAATCAATAATTTGTGTCATTTTGATATTAATCTCCTTCTCTCTTTTACCATTCTGTTCCAGTGCCCACTGCACGATGTCGKTGCACTCCAGCCCGCACAGGAACCCTTCGCACTTCTTCGACAGACAGTCCCGATTGACGGACGGTTGCCTTGCACTGGGGATGAAATTATCGCACGACGGCAGGTTGCGTATCAGATGGTGAAAGATCAGCGACGACAGGTGCGCCTCCCGCATTAGCAACACCTTCAGCAGCAGCCACCAG] [+] EMBL AGA281384 [TTTTTTTTGCTTTTGTTAACTGAACCGAACGCACGTGTATTTACTTTGCTCCGCATATCACATTTTCCTTTCGCTCTGCTTTTATTTCGGCGGGCAGAATCTCCGCCAGACAGTTGGTGACGGTGTAGAAGCAGTCCGGGATGCAGTCCCACATCTCGGAGAAGCAGGACAGGGACAGCGACATGGCCTGGTACATGCTGGCCGTCGTTTGGACGGCCGAGACGAGCATGTGCACCACCGGGCCAAGGATCGGGTAGATCAGATGGAGGATGGCTTCGAGCCACGGGGGTCGCTTCTGGTTCCACACCTGCCGCCGGTCCAGACAGGAGGCCCAATCGTTCATTTTGCTCTTCTCCAGGGCGGAGATGAGCGTCTTGTTGATGTCGGACGTCTTGCCCGCCATGATGACGATGTACGTGAGCCCCATCAGGACCTGGTAGTTGGACTGGCCGATCGGATCTAATGGAATAAGGGGAAAGTATTATAAAAAAAATCAATAATTTGTGTCATTTTGATATTAATCTCCTTCTCTCTTTTACCATTCTGTTCCAGTGCCCACTGCACGATGTCGKTGCACTCCAGCCCGCACAGGAACCCTTCGCACTTCTTCGACAGACAGTCCCGATTGACGGACGGTTGCCTTGCACTGGGGATGAAATTATCGCACGACGGCAGGTTGCGTATCAGATGGTGAAAGATCAGCGACGACAGGTGCGCCTCCCGCATTAGCAACACCTTCAGCAGCAGCCACCAG] consensusID : consensus_9404#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 664 fasta sequence [GCGTAGGTAGTGAACTTCGGCGTCAAATCATTCCCTTTCAGTGTGATGAATGCTCCCAGATTCTTCATTTGATCGCAATAATTAGGTGCCGAAAAGACGGTTATGCATTTGCCGTTATGGTCCACCTCGTAACCCTCCGCCTTGACCTCGTGGCTGCGAATGATGTAGTCCAGATTGTTGTACTTCAGGAATGCCTCCGTTACATCGGGGCCGAACTGTATGCCGACGCCGCGCTTCGACGGTACGCGCCCGGGCAGGGGATGCGGATCGGACCACAGCAGTTCGCACATCAGGCCCTCCTCCGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTCGAGAACAGCCCGCCGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAGTGGCAGCCAGTTGTACACGAGCGTAAACATGTCGGCCATGTTTTGCGAGTACTTTGAAACCACCTCGCCGGTAAAACCGTACAGCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGCGCGAGGAAGAAGTGGTTGGGGTATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGCCCACGCGTCCGCGG] [-] EMBL BM575285 [GCGTAGGTAGTGAACTTCGGCGTCAAATCATTCCCTTTCAGTGTGATGAATGCTCCCAGATTCTTCATTTGATCGCAATAATTAGGTGCCGAAAAGACGGTTATGCATTTGCCGTTATGGTCCACCTCGTAACCCTCCGCCTTGACCTCGTGGCTGCGAATGATGTAGTCCAGATTGTTGTACTTCAGGAATGCCTCCGTTACATCGGGGCCGAACTGTATGCCGACGCCGCGCTTCGACGGTACGCGCCCGGGCAGGGGATGCGGATCGGACCACAGCAGTTCGCACATCAGGCCCTCCTCCGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTCGAGAACAGCCCGCCGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAGTGGCAGCCAGTTGTACACGAGCGTAAACATGTCGGCCATGTTTTGCGAGTACTTTGAAACCACCTCGCCGGTAAAACCGTACAGCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGCGCGAGGAAGAAGTGGTTGGGGTATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGCCCACGCGTCCGCGG] [-] EMBL BX604060 [ TGCATTTGCCGTTATGGTCCACCTCGTAACCCTCCGCCTTGACCTCGTGGCTGCGAATGATGTAGTCCAGATTGTTGTACTTCAGGAATGCCTCCGTTACATCGGGGCCGAACTGTATGCCGACGCCGCGCTTCGACGGTACGCGCCCGGGCAGGGGATGCGGATCGGACCACAGCAGTTCGCACATCAGGCCCTCCTCCGGCGGCTGACAGTTGCGATCGATC ] consensusID : consensus_9404#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence [CATCTTTCTGTTTATCGGATATTTATGTACTATTTGCTGGCCACATTTGTTTTTGTATGATAATTACTTATCAAGAAAACTAGGTTAATAGACCGATGTTTTGCTGAAGGAAACATGTTCAAGTGTAACGCGTTCCGTCACCTTTGTTCTAGTGCTGCCATTCACTCATGTTCGTGTTATGATCTCTCATCATTTGTAAAGCTCCAGCAAACATTAAAAAAAGACATCTATTTTGCCAAATTCTCGGAGCTGGGTTTCAATTGGCTCTGATATAATTGATACTTGAATAAGAAGAAGAAAAAACAGGAAGGAAACGAAATAAACAAGGATCCGATCGATCGTACCCTACAACGAATGAATCATTGAGCTTGCCTCACGATCACTGCGATGATGGAGATATAAACGCAAAAGTCAAACAGCAACAAATGAAGAAAACATATTGAAATTACGTCAATACCTTTCAACTGAGCGCTTTAACCGTACTATGACATCAAACTGTAAGCGTATGCCATCGGCCGAATGGAGGGATGTGGCGAATCTGCGTAGGTAGTGAACTTCGGCGTCAAATCATTCCCTTTCAGTGTGATGATGCTCCCAGATTCTTCATTGATCCCTCGGGGAT] [-] EMBL AL933789 [CATCTTTCTGTTTATCGGATATTTATGTACTATTTGCTGGCCACATTTGTTTTTGTATGATAATTACTTATCAAGAAAACTAGGTTAATAGACCGATGTTTTGCTGAAGGAAACATGTTCAAGTGTAACGCGTTCCGTCACCTTTGTTCTAGTGCTGCCATTCACTCATGTTCGTGTTATGATCTCTCATCATTTGTAAAGCTCCAGCAAACATTAAAAAAAGACATCTATTTTGCCAAATTCTCGGAGCTGGGTTTCAATTGGCTCTGATATAATTGATACTTGAATAAGAAGAAGAAAAAACAGGAAGGAAACGAAATAAACAAGGATCCGATCGATCGTACCCTACAACGAATGAATCATTGAGCTTGCCTCACGATCACTGCGATGATGGAGATATAAACGCAAAAGTCAAACAGCAACAAATGAAGAAAACATATTGAAATTACGTCAATACCTTTCAACTGAGCGCTTTAACCGTACTATGACATCAAACTGTAAGCGTATGCCATCGGCCGAATGGAGGGATGTGGCGAATCTGCGTAGGTAGTGAACTTCGGCGTCAAATCATTCCCTTTCAGTGTGATGATGCTCCCAGATTCTTCATTGATCCCTCGGGGAT] consensusID : consensus_9404#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 377 fasta sequence [CGTGTATTTACTTTGCTCCGCATATCACATTTTCCTTTCGCTCTGCTTTTAATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGATGGCAAACCATTGATTTCGAATATATGTAGCAGGTCGTAGAACTGCCCATGGATATCGCCACACACTGTAAACTTTTGTTCGTCCGGCACTGGTATCTCCACCAGGGAGGGTTGCGTTTTCAGCAGCGTTTCCATATCGCAAAGAATCCTGTAGGCAAAGTTTTTATGCAGCTTGTTCTGCTTCTTGTACCACTCAAGTAGACTCTTCATGAACTCCAGCGTTACCTTA] [+] EMBL AGA282775 [CGTGTATTTACTTTGCTCCGCATATCACATTTTCCTTTCGCTCTGCTTTTAATAGCAACTTAAAACCGAACAGGGTGAAGATGCATTCCACCGAGAATGAGCCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGCGATGGCAAACCATTGATTTCGAATATATGTAGCAGGTCGTAGAACTGCCCATGGATATCGCCACACACTGTAAACTTTTGTTCGTCCGGCACTGGTATCTCCACCAGGGAGGGTTGCGTTTTCAGCAGCGTTTCCATATCGCAAAGAATCCTGTAGGCAAAGTTTTTATGCAGCTTGTTCTGCTTCTTGTACCACTCAAGTAGACTCTTCATGAACTCCAGCGTTACCTTA] consensusID : consensus_9404#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 105 fasta sequence [AAAAAACAAATGCGCCCAGCAAATAATACATAAATATCCAATAAACAGAAAGACGGCAAAATGTTTGATCCGCGGTCGCACCATGCACTTAGAGCTTTATTGAAA] [+] EMBL BX609100 [AAAAAACAAATGCGCCCAGCAAATAATACATAAATATCCAATAAACAGAAAGACGGCAAAATGTTTGATCCGCGGTCGCACCATGCACTTAGAGCTTTATTGAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9404#0 TTTTGTTTTGTTTGGACCGTTCTCCATCTATTTGTATGTTCTCTCTATACAGTTTCCAAC 60 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 TTCACGCACACCAAAAGACCAAATTGTAATATTACAAGAGCATTTAACCAATCGTTTGCA 120 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 CTGCTTTTCAATAAAGTTCTAACTGCATAATGCAACCGCGGATCAAACATTTTGCCATCT 180 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 TTCTGTTTATCGGATATTTATGTACTATTTGCTGGCCACATTTGTTTTTTTTTTAATGAT 240 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 AATTACTTATCAAGAAAACTAGGTTAATAGACCGATGTTTTGCTGAAGGAAACATGTTCA 300 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 AGTGTAACGCGGTTCCGTCACCTTTTTCTATGCTGCCATTCACTCATGTTCGTGTTATGA 360 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 TCTCTCATCATTTGTAAAGCTCCAGCAAACATTAAAAAAGACATCTATTTTGCCAAACTC 420 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 TCGGAGCTGGGTTTCAATTGGCTGAGATATAATTGATACTTGAATAAGAAGAAAAAACAG 480 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 GAAGGAAACGAAATAAACAAGGATCTGATCGATCGTACCCTACAACGAATGAATCATTGA 540 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 GCTTGCCTCACGATCACTACGATGATGGAGATTTTAACGCAAAAGTCAAACAGCAACAAA 600 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 TGAAGAAAACATATTGAAATTACGTTCAATACCTTTCAACTGAGCGCTTTAACCGTACTA 660 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 TGACATCAAACTGTAAGCGTATGCCATCGGCCGAATGGAGGGATGTGGCGAATCTGCGTA 720 consensus_9404#2 -------------------------------------------------------GCGTA 5 consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 -----------------TTTTTTTTGCTTTTGTTAACTGAACCGAACGCACGTGTATTTA 43 consensus_9404#0 GGTAGTGAACTTCGGCGTCAAATCATTCCCTTTCAGTGTGATGAATGCTCCCAGATTCTT 780 consensus_9404#2 GGTAGTGAACTTCGGCGTCAAATCATTCCCTTTCAGTGTGATGAATGCTCCCAGATTCTT 65 consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 --------------------------CATCTTTCTGTTTATCGGATATTTATGTACTATT 34 consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 CTTTGCTCCGCATATCACATTTTCCTTTCGCTCTGCTTTTATTTCGGCGGGCAGAATCTC 103 consensus_9404#0 CATTTGATCGCAA-TAATTAGGTGCCGAAAAGACGGTTATGCATTTGCCGTTATGGTCCA 839 consensus_9404#2 CATTTGATCGCAA-TAATTAGGTGCCGAAAAGACGGTTATGCATTTGCCGTTATGGTCCA 124 consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 TGCTGGCCACATT-TGTTTTTGTATGATAATTACTTATCAAGAAAACTAGGTTAATAGAC 93 consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 CGCCAGACAGTTGGTGACGGTGTAGAAGCAGTCCGGGATGCAGTCCCACATCTCGGAGAA 163 consensus_9404#0 CCTCGTAACCCTCCGCCTTGACCTCGTGGCTGCGAATGATGTAGTCCAGATTGTTGTACT 899 consensus_9404#2 CCTCGTAACCCTCCGCCTTGACCTCGTGGCTGCGAATGATGTAGTCCAGATTGTTGTACT 184 consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 CGATGTTTTGCTGAAGGAAACATGTTCAAGTGTAACGCGTTCCGTCACCTTTGTTCTAGT 153 consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 GCAGGACAGGGACAGCGACATGGCCTGGTACATGCTGGCCGTCGTTTGGACGGCCGAGAC 223 consensus_9404#0 TCAGGAATGCCTCCGTTACATCGGGGCCGAACTGTATGCCGACGCCGCGCTTCGACGGTA 959 consensus_9404#2 TCAGGAATGCCTCCGTTACATCGGGGCCGAACTGTATGCCGACGCCGCGCTTCGACGGTA 244 consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 GCTGCCATTCACTCATG--TTCGTGTTATGATCTCTCATCATTTGTAAAGCTCCAGCAAA 211 consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 GAGCATGTGCACCACCGGGCCAAGGATCGGGTAGATCAGATGGAGGATGGCTTCGAGCCA 283 consensus_9404#0 CGCGCCCGGGCAGGGGATGCGGATCGG--ACCACAGCAGTTCGCACATCAGGCCCTCCTC 1017 consensus_9404#2 CGCGCCCGGGCAGGGGATGCGGATCGG--ACCACAGCAGTTCGCACATCAGGCCCTCCTC 302 consensus_9404#4 -----------------CGTGTATT------TACTTTGCTCCGCATATCACATTTTCCTT 37 consensus_9404#3 CATTAAAAAAAGACATCTATTTTGCCA--AATTCTCGGAGCTGGGTTTCAATTGGCTCTG 269 consensus_9404#5 ------------------------------------------AAAAAACAAATGCGCCCA 18 consensus_9404#1 CGGGGGTCGCTTCTGGTTCCACACCTGCCGCCGGTCCAGACAGGAGGCCCAATCGTTCAT 343 * * consensus_9404#0 CGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTC-- 1075 consensus_9404#2 CGGCGGCTGACAGTTGCGATCGATCGAGCGCAAATCGTCCAGCGACACGTTATCCTTC-- 360 consensus_9404#4 TCGCT-CTGCTTTTAATAGCAACTTAAAACCGAACAGGGTGAAGATGCATT--CCACC-- 92 consensus_9404#3 ATATAATTGATACTTGAATAAGAAGAAGAAAAAACAGGAAGGAAACGAAATAAACAAG-- 327 consensus_9404#5 GCAAA--TAATACATAAATATCCA-----ATAAACAGAAAGACGGCAAAATGTTT----- 66 consensus_9404#1 TTTGCTCTTCTCCAGGGCGGAGATGAGCGTCTTGTTGATGTCGGACGTCTTGCCCGCCAT 403 * * * consensus_9404#0 GAGAACAGCCCGC-CGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAG---TGG 1131 consensus_9404#2 GAGAACAGCCCGC-CGTGCATTACCAGCACCTTTTTGTTGATCAAATGGCACAG---TGG 416 consensus_9404#4 GAGAATGAGCCCC-TGT------CGACGAAATCGCCATTGAATAGGTAGGG-AT---TGG 141 consensus_9404#3 GATC-CGATCGAT-CGTACCCTACAACGAATGAATCATTGAGCTTGCCTCACGA---TCA 382 consensus_9404#5 GATC-CG--CGGT-CGCACCATGCACTTAGAGCTTTATTGAAA----------------- 105 consensus_9404#1 GATGACGATGTACGTGAGCCCCATCAGGACCTGGTAGTTGGACTGGCCGATCGGATCTAA 463 ** * * *** consensus_9404#0 CAGC-CAGTTGTACACGAGCGTAAAC-ATGTCGGCCATGTTTTGCGAGTACTTCGAAACC 1189 consensus_9404#2 CAGC-CAGTTGTACACGAGCGTAAAC-ATGTCGGCCATGTTTTGCGAGTACTTTGAAACC 474 consensus_9404#4 TGGG-CGATGGCAAACCATTG------ATTTCGAATATATGTAGCAGGT--CGTAGAACT 192 consensus_9404#3 CTGC-GATGATGGAGATATAA------ACGCAAAAGTCAAACAGCAACAAATGAAGAAAA 435 consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 TGGAATAAGGGGAAAGTATTATAAAAAAAATCAATAATTTGTGTCATTTTGATATTAATC 523 consensus_9404#0 ACCTCGCCGGTAAAACCGTACA--GCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGCG 1247 consensus_9404#2 ACCTCGCCGGTAAAACCGTACA--GCTGGTTCATGTTGAAGCTTTCGTGATTTCCTCGCG 532 consensus_9404#4 GCC-CATGGATATCGCCACACACTGTAAACTTTTGTTCGTCCGGCACTGGTATCTCCACC 251 consensus_9404#3 CATATTGAAATTACGTCAATACCTTTCAACTGAGCGCTTTAACCGTACTATGACATCAAA 495 consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 TCCTTCTCTCTTTTACCATTCTGTTCCAGTGCCCACTGCACGATGTCGKTGCACTCCAGC 583 consensus_9404#0 CGAGGAAGAAGTGGTTGGGGTATAGCAACTTAAAACCGAACAGGGT---GAAGATGCATT 1304 consensus_9404#2 CGAGGAAGAAGTGGTTGGGGTATAGCAACTTAAAACCGAACAGGGT---GAAGATGCATT 589 consensus_9404#4 AGGGAGGGTTGCGTTTTCAGCA--GCGTTTCCATATCGCAAAGAATCCTGTAGGCAAAGT 309 consensus_9404#3 CTGTAAGCGTATGCCATCGGCCGAATGGAGGGATGTGGCGAATCTGC--GTAGGTAGTGA 553 consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 CCGCACAGGAACCCTTCGCACTTCTTCGACAGACAGTCCCGATTGACGGACGGTTGCCTT 643 consensus_9404#0 CCACCGAGAATGAG-CCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGC 1363 consensus_9404#2 CCACCGAGAATGAG-CCCCTGTCGACGAAATCGCCATTGAATAGGTAGGGATTGGTGGGC 648 consensus_9404#4 TTTTATGCAGCTTG-TTC-TGCTTCTTGTACCAC--TCAAGTAGACT---CTTCATGAAC 362 consensus_9404#3 ACTTCGGCGTCAAA-TCATTCCCTTTCAGTGTGATGATGCTCCCAGATTCTTCATTGATC 612 consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 GCACTGGGGATGAAATTATCGCACGACGGCAGGTTGCGTATCAGATGGTGAAAGATCAGC 703 consensus_9404#0 GATGGCAAACCATTGATTTCGAATATATGTAGCAGGTCGTAGAACTGCCCATGGATATCG 1423 consensus_9404#2 GCCCACGCGTCCGCGG-------------------------------------------- 664 consensus_9404#4 TCCAGCGTTACCTTA--------------------------------------------- 377 consensus_9404#3 CCTCGGGGAT-------------------------------------------------- 622 consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 GACGACAGGTGCGCCTCCCGCATTAGCAACACCTTCAGCAGCAGCCACCAG--------- 754 consensus_9404#0 CCACACACTGTAAACTTTTGTTCGTCCGGCACTGGTATCTCCACCAGGGAGGGTTGCGTT 1483 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 TTCAGCAGCGTTTCCATATCGCAAAGAATCCTGTAGGCAAAGTTTTTATGCAGCTTGTTC 1543 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 TGCTTCTTGTACCACTCAAGTAGACTCTTCATGAACTCCAGCGTTACCTTACCGTTTTCC 1603 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 AGCTTCGGTCCAGTGTAGTCATCCTCGATAGTTGCGAATTCCATATCACGGCACATTTTT 1663 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 TCCACGCTCTTTTCCTGATGCTGCACCGAGATGGCCTTCTCGAACGCGATCTTGTTGACC 1723 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 ATCTTTTTGCACTCGGTGTACTTGTCCTGGGCATCCTTCGCGCTTGCCCACCGTTTCGCG 1783 consensus_9404#2 ------------------------------------------------------------ consensus_9404#4 ------------------------------------------------------------ consensus_9404#3 ------------------------------------------------------------ consensus_9404#5 ------------------------------------------------------------ consensus_9404#1 ------------------------------------------------------------ consensus_9404#0 ACAAACTACAGGTCGGCTAGCGCCTTCTTGAACCTGCCGAGC 1825 consensus_9404#2 ------------------------------------------ consensus_9404#4 ------------------------------------------ consensus_9404#3 ------------------------------------------ consensus_9404#5 ------------------------------------------ consensus_9404#1 ------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||