These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9406#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1471 fasta sequence [TTGCTGCGTGAGGAGGTTGCGCTCCGCCTGCTTCCCCACCTGTGCTTGCGTTATCTTTTGTTCGAGACAGTTCATTTGCCTACACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC--CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTT-GGTAGAGAACTACGTGCCCGGGAA-GCTGGACTCGCTA-GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT-GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC-TCACA-CCGGAAGGAACTG-ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT-AAACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAATGATCATTGTTGAGTAAGGAAAA] [+] EMBL CNS08OQG [TTGCTGCGTGAGGAGGTTGCGCTCCGCCTGCTTCCCCACCTGTGCTTGCGTTATCTTTTGTTCGAGACAGTTCATTTGCCTACACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAAC ] [+] EMBL CNS090UP [ ggagTCATTTGCGTACACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCATCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGGGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAATTTTAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTTGGGTAGAGAACTACGTGCCCGGGAAGGCTGGACTCGCTAGGGGCTGGGgct ] [+] EMBL CNS08X0V [ CACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCATCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAAATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCGAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCTGGGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCC ] [+] EMBL CNS09IVM [ CGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGAAATCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACATAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAACTGAAAAAAGATCCTTTCGGACA ] [+] EMBL CNS09APV [ cgAAACCCCTTACTGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGCCGCGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGGCGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACATAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCAC ] [+] EMBL BX622730 [ GTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCANGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGANGCGAAAC ] [-] EMBL CNS08OQH [ CGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTTTGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT AAACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAATGATCATTGTTGAGTAAGGAAAA] [+] EMBL BX624926 [ A GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGACGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATC ] [-] EMBL CNS09IVN [ TGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATG ACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGAAATAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT AAACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAA ] [-] EMBL CNS09APW [ ACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACATAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT AAACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACACTCAGGCTGGGTT ] [-] EMBL CNS08X0W [ GTTCCATAACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATG ACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCGAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGTACGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT AAACAGCATGAAAGAAGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAATGAa ] [-] EMBL CNS090UQ [ cagcagcaGTCATCACACCCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATAAAAAAGCATGAAAGAAGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAATGATCATTGTTGAAAAAG ] consensusID : consensus_9406#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 901 fasta sequence [TTGCGTGAACTTGAAGACGGGTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGCCCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCTGGGGAACGGCACACGAAAGCATTGTTCCGTATGATGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGACGCGCGTTTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATAAACAGCATGAAAGATGTTTTTGAGGATCACCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGGATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAA] [+] EMBL CNS093YM [TTGCGTGAACTTGAAGACGGGTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGCCCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCTGGGGAACGGCACACGAAAGCATTGTTCCGTATGATGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGACGCGCGTTTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATAAACAGCATGAAAGATGTTTTTGAGGATCACCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGGATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAA] [-] EMBL CNS093YN [ CCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGACGCGCCTCTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATAAACAGCATGAAAGAGGTTTTTGAGGATCACCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGGATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGA ] consensusID : consensus_9406#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence [AGAATCTGCCCCGCAGGTATTATCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGCCCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTTGTTCTATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGTACACATTACCGGAAGCGAGGACGGACCACGGCAAGGTTTGGCATAGCGATCACGGACATTTGCCACGGGACTGTATTGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAAGGAGGCGAA] [+] EMBL AL693605 [AGAATCTGCCCCGCAGGTATTATCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGCCCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTTGTTCTATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGTACACATTACCGGAAGCGAGGACGGACCACGGCAAGGTTTGGCATAGCGATCACGGACATTTGCCACGGGACTGTATTGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAAGGAGGCGAA] consensusID : consensus_9406#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 158 fasta sequence [CAAGANTCCGACGAGTGNATCGGCGTGCACACATTGCCACTGATACTGGGGGGGACAACAATTTCCTCTGGAAGGAGTCCCGCATNACTTGAATCTAACGCGCTCTGTTNTACCGGGCCGTATTGTACCCATGGTTGACTCGGGAGATCTCCGTGCGG] [+] EMBL BX469143 [CAAGANTCCGACGAGTGNATCGGCGTGCACACATTGCCACTGATACTGGGGGGGACAACAATTTCCTCTGGAAGGAGTCCCGCATNACTTGAATCTAACGCGCTCTGTTNTACCGGGCCGTATTGTACCCATGGTTGACTCGGGAGATCTCCGTGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9406#1 ------------------------------------------------------------ consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 TTGCTGCGTGAGGAGGTTGCGCTCCGCCTGCTTCCCCACCTGTGCTTGCGTTATCTTTTG 60 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 ------------------------------------------------------------ consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 TTCGAGACAGTTCATTTGCCTACACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTAC 120 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 ------------------------------------------------------------ consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 TGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGG 180 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 ------------------------------------------------------------ consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 GGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGCCG 240 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 ------------------------------------------------------------ consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 GGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGAC 300 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 ------------------------------------------------------------ consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 CGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATT 360 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 ----------------------------------------TTGCGTGAACTTGAAGACGG 20 consensus_9406#2 --------------AGAATCTGCCCCGCAGGTATTATCGTTTGCGTGAACTTGAAGACGG 46 consensus_9406#0 CCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGG 420 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 GTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGC 80 consensus_9406#2 GTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGC 106 consensus_9406#0 GTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGC 480 consensus_9406#3 -----CAAGANTCCGACGAGTGNATC--GGCGTGC-ACACATTGCCACTGA--TAC-TGG 49 * * ***** * * **** ** *** * ** *** ** consensus_9406#1 CCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCAT-CG 139 consensus_9406#2 CCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCAT-CG 165 consensus_9406#0 CCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCAT-CG 539 consensus_9406#3 GGGGGACAACAATTTCCTCTGGAAGGAGTCCCGCATNACTTGAATCTAACGCGCTCTGTT 109 **** ** ** * * ** * ** **** * *** * * consensus_9406#1 CTAGTGTACT-GTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGG 198 consensus_9406#2 CTAGTGTACTTGTTCTATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGG 225 consensus_9406#0 CTAGTGTACT-GTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGG 598 consensus_9406#3 NTACCGGGCC-GTATTGTACCCATGGTTGACTCGGGAGATCTCCGTGCGG---------- 158 ** * * ** * * * * **** * * ** consensus_9406#1 CTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGG 258 consensus_9406#2 CTACGACGTTATCGCCGCATCCATGGGTGGGCTG-TACACATTACCGGAAGCGAGGACGG 284 consensus_9406#0 CTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGG 658 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 ACCACCGGCCAAGGTTGGCATAGCGATCACGGACATT-GCCACGGGACTGTTGCATGTTT 317 consensus_9406#2 ACCAC-GGCAAGGTTTGGCATAGCGATCACGGACATTTGCCACGGGACTGTATTGCACAC 343 consensus_9406#0 ACCACCGGCCAAGGTTGGCATAGCGATCACGGACATT-GCCACGGGACTGTA-TGCACAC 716 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 GATA-AACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCTGGGGAACGG 376 consensus_9406#2 GGTGCAATACTAGCCGCG-CTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTG- 401 consensus_9406#0 GGTGCAATACTAGCCGCG-CTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTG- 774 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 CACACGAAAGCATTGTTC-CGTATGATGCGTTCGAGACGAAAACGGGTTACATTACGCTT 435 consensus_9406#2 -ACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTC 460 consensus_9406#0 -ACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTC 833 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 GGCTGTGG---------------------------------------------------- 443 consensus_9406#2 AACGCCGGC--------------------------------------------------- 469 consensus_9406#0 AACGCCGGCAAGGAGGCGAAACGCTGGGGAACGGCACACGAAAGCATTGTTCCGTATGAG 893 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 -----------------------------------------AAGTGATGCGCAGTTTGTG 462 consensus_9406#2 -----------------------------------------AAAGGAGGCGAA------- 481 consensus_9406#0 GCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTG 953 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 TCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAAC 522 consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 TCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAAC 1013 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 CGGACGCGCGTTTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGC 582 consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 CGGATGCGCGTCTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGC 1073 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 AAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATA 642 consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 AAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATA 1133 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 AACAGCATGAAAGATGTTTTTGAGGATCACCATTTGCAGGCCATTGGAATGGTTAAGACA 702 consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 AACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACA 1193 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 CTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAA 762 consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 CTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAA 1253 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 GCGAAGGATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTG 822 consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 GCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTG 1313 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 CGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATA 882 consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 CGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATA 1373 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 CAATAAGCATCGGTTCGAA----------------------------------------- 901 consensus_9406#2 ------------------------------------------------------------ consensus_9406#0 CAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTA 1433 consensus_9406#3 ------------------------------------------------------------ consensus_9406#1 -------------------------------------- consensus_9406#2 -------------------------------------- consensus_9406#0 AATCCTTGTAATAAATGATCATTGTTGAGTAAGGAAAA 1471 consensus_9406#3 -------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||