These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9412#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1314 fasta sequence [CCGCGGACGCGTCCGCGGACGCGTCGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACC-GGCACACCGATCGCCGGCTCGTACGCCGTTGTGATCGGGCGCAGCAAGATCGTCGGTACGCCGATGTCGGAGCTGCTCAAGTGGGCCGATGCCACCGTCACGGTGGCCCACTCGAAGACGAAGAACCTCAACTTGCTGATTAAGAAGGCGGACATTCTGGTGGTTGCCGTCGGGCGTCCGGAGATGGTACGGGGCGCCTGGATAAAGCCCGGTGCCGTCGTCATCGACTGTGGCATCAACTCCATCCCGGACCCGAACG-AGAAGAGTGGCCAGCGGTTGGTGGGAGACGTAAAGTACGAGGAGGCACTCCCCGTTGCGTCGCACGTTACGCCGGTACCTGGAGGCGTCGGGCCGATGACGGTGGCGATGCTGATGCAGAACACCGTTCAGTCTGCCCAGAGAGTTGCCCGGAGATTGATCGAGATGGAGTTCCGCTGGTGCCTGAAGCCGCTGCCACTGAAGCTTACCGAACCGGTTCCGAGTGACATCGAGATCGCTCGTGCCCAGGAGCCGAGGGATGTGGCGGTGCTGGCGCAGGAGATTGGGCTAATACCCGTCGGACGGTTTCGCTGTACGGCACCAAGAAGGCGAACGTATCGCTGAAGGTGCTGCAGCGGCT] [+] EMBL BM612763 [CCGCGGACGCGTGGGCGGACGCGTGGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGCAGTAGCAGCATCCTGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACGCGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGG ] [+] EMBL BM654384 [ CCGCCCACGCGTCCGCCC ACGCGTCCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACCGGGCACA ] [+] EMBL BM628700 [ CCGCGGACGCGTGGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACCGGGCACACCGATCGCCGGCTC ] [+] EMBL BM629317 [ cCGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGCAGTAGCAGCATCCTGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACGCGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACC GGCACACCGATCGCCGGCTCGTACGCCGTTGTGA ] [+] EMBL BM604003 [ ccGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGC ] [+] EMBL BM575412 [ ccGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTAC ] [+] EMBL BM626938 [ ccgGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACCGGGCACACCGATCGCCGGCTCGTACGCCGTTGTGA ] [+] EMBL BM632613 [ ccgCACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACC GGCACACCGATCGCCGGCTCGTACGCCGTTGTGATCGGGCGCAGC ] [+] EMBL BM607166 [ cCGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACC GGCACACCGATCGCCGGCTCGTACGCCGTTGTGATCGGGCGCAGCAAGATCGTCGGTACGCCGATGTCGGAGCTGCTCAAGTGGGCCGATGCCACCGTCACGGTGGCCCACTCGAAGACGAAGAACCTCAACTTGCTGATTAAGAAGGCGGACATTCTGGTGGTTGCCGTCGGGCGTCCGGAGATGGTACGGGGCGCCTGGATAAAGCCCGGTGCCGTCGTCATCGACTGTGGCATCAACTCCATCCCGGACCCGAACG ] [+] EMBL BM634113 [ ccgCGGTTGCATGGAGCTGATCAAGCGCACC GGCACACCGATCGCCGGCTCGTACGCCGTTGTGATCGGGCGCAGCAAGATCGTCGGTACGCCGATGTCGGAGCTGCTCAAGTGGGCCGATGCCACCGTCACGGTGGCCCACTCGAAGACGAAGAACCTCAACTTGCTGATTAAGAAGGCGGACATACTGGTGGTTGCCGTCGGGCGTCCGGAGATGGTACGGGGTGCATGGATAAAGCCCGGTGCCGTCGTCATCGACTGTGGCATTAACTCCATCCCGGACCCG ACGAAGAAGAGTGGCCAGCGGTTGGTGGGAGACGTAAAGTACGAGGAGGCACTCCCCGTTGCGTCGCACGTTACGCCGGTACCTGGAGGCGTCGGGCCGATGACGGTGGCGATGCTGATGCAGAACACCGTTCAGTCTGCCCAGAGAGTTGCCCGGAGATTGATCGAGATGGAGTTCCGCTGGTGCCTGAAGCCGCTGCCACTGAAGCTTACCGAACCGGTTCCGAGTGACATCGAGATCGCTCGTGCCCAGGAGCCGAGGGATGTGGCGGTGCTGGCGCAGGAGATTGGGCTAATACCCGTCGGACGGTTTCGCTGTACGGCACCAAGAAGGCGAACGTATCGCTGAAGGTGCTGCAGCGGCT] consensusID : consensus_9412#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1060 fasta sequence [GCCTACTGGNGATTTTANTTTCCGACCCCGTGAAGGTTGCTCCAATTGCACCAGGACGTACAGGGAAGATTCCCGTAAAACAACACATTCACTTATTGCCACTGGAAGAAGGCAGACCAGCTGAAACAAACATTCGGCTGAGGGTGTAAAACTGCAAGACAAAATGAAGGGACTGCTTCTGCTAGCAGCCTTGTTGTCGGTAGCCATATCGGCCACCGTTGCTGATCGGGCAGAGACGCTCAATCTCTTCAACCAGTTAAAGCGCGTGAAGAAGGGTCGCATGCTTGGTGCTGATGAGGACTTTGTATCGCTCGTCCAGTCACAGCTATTGCTGGCCGAAGAAGAGTACGTCCGCTCGTCCATAAATGGGGAGTCGTCGATTCTGCAGGAGCTGTCCACCGCGGAAGCACAGGCAAGTGGCCCGAACTGTGTAGACTTTATCCGCCAGAAGACGGCACTGATGCTGAATCTAGCTGGTGTATCGTATGCGTCCTGCCTGAGCCGTGTCGATGATGCGTTGTTTGAAAAGCTGTACGATGCAACGAATGGTGTGGTATCGCGCGAACAGTACGATCAGGCCAACATGCTTAACGCTTTCCGGGGTGAGAACATCTTTGTGGACATGGACCGTATTCGGGGCAAGCTGCAGGAGCGAATGCGTGCCACGTTCAAGCTGCCGACGTTGACTGCGGAATCGTTGCAGGAAATTCGCAGTGAGCTGGGTGAGGTGAAAGAACAGTTTGCAGAGTGCATGAAGGTGGCACGGGCCACACTGGATACTTCGCTCGAAAGCACTTCGAAGCAGTACAAGTCCATCGAGCTTCCCGAACGGGAGGATATGCATTCATGCATCTACATCCAGGTGTGTACGTTCCGATCTGCCATAGCAATTGGTGATACAGCTTTTTCCATCTCTAAAAAGAGGACAAATCAATAGAACATCGCTGGTGTGTCCATCTACAGGTTAATGAGGAAGAGAAGGGCAACATAACCGCTTCTTGCAGGATACCTACCCATGAGTGTGTTTGTTCTAATTGGCTACAGCAACAAAACGATACGC] [+] EMBL CNS091SR [GCCTACTGGNGATTTTANTTTCCGACCCCGTGAAGGTTGCTCCAATTGCACCAGGACGTACAGGGAAGATTCCCGTAAAACAACACATTCACTTATTGCCACTGGAAGAAGGCAGACCAGCTGAAACAAACATTCGGCTGAGGGTGTAAAACTGCAAGACAAAATGAAGGGACTGCTTCTGCTAGCAGCCTTGTTGTCGGTAGCCATATCGGCCACCGTTGCTGATCGGGCAGAGACGCTCAATCTCTTCAACCAGTTAAAGCGCGTGAAGAAGGGTCGCATGCTTGGTGCTGATGAGGACTTTGTATCGCTCGTCCAGTCACAGCTATTGCTGGCCGAAGAAGAGTACGTCCGCTCGTCCATAAATGGGGAGTCGTCGATTCTGCAGGAGCTGTCCACCGCGGAAGCACAGGCAAGTGGCCCGAACTGTGTAGACTTTATCCGCCAGAAGACGGCACTGATGCTGAATCTAGCTGGTGTATCGTATGCGTCCTGCCTGAGCCGTGTCGATGATGCGTTGTTTGAAAAGCTGTACGATGCAACGAATGGTGTGGTATCGCGCGAACAGTACGATCAGGCCAACATGCTTAACGCTTTCCGGGGTGAGAACATCTTTGTGGACATGGACCGTATTCGGGGCAAGCTGCAGGAGCGAATGCGTGCCACGTTCAAGCTGCCGACGTTGACTGCGGAA ] [+] EMBL BX608151 [ GATTCTGCAGGAGCTGTCCACCGCGGAAGCACAGGCAAGTGGCCCGAACTGTGTAGACTTTATCCGCCAGAAGACGGCACTGATGCTGAATCTAGCTGGTGTATCGTATGCGTCCTGCCTGAGCCGTGTCGATGATGCGTTGTTTGAAAAGCTGTACGATGCAACGAATGGTGTGGTATCGCGCGAACAGTACGATCAGGCCAACATGCTTAACGCTTTCCGGGGTGAGAACATCTTTGTGGACATGGACCGTATTCGGGGCAAGCTGCAGGAGCGAATGCGTGCCACGTTCAAGCTGCCGACGTTGACTGCGGAATCGTTGCAGGAAATTCGCAGTGAGCTGGGTGAGGTGAAAGAACAGTTTGCAGAGTGCATGAAGGTGGCACGGGCCACACTGGATACTTCGCTCGAAAGCACTTCGAAGCAGTACAAGTCCATCGAGCTTCCCGAACGGGAGGATATGCATTCATGCATCTACATCCAGGTGTGTACGTTCCGATCTGCCATAGCAATTGGTGATACAGCTTTTTCCATCTCTAAAAAGAGGACAAATCAATAGAACATCGCTGGTGTGTCCATCTACAGGTTAATGAGGAAGAGAAGGGCAACATAACCGCTTCTTGCAGGATACCTACCCATGAGTGTGTTTGTTCTAATTGGCTACAGCAACAAAACGATACGC] consensusID : consensus_9412#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 852 fasta sequence [TCTTCACTCGCGCTTTTTTATTGTTGGGGATTCCATTATAAATGTACACACGATTTACTGCGCTTAAATACGCGACGGGTAAAGCATGATTCTGATGCGATGGCCCATGGCGTGTCCGGGCAGGTTGGTGCGGAATCGTGCGCGAACGCTGCCACTGTTACCGTGCGAACGGGTAATCTTGCCCCAGATGGCGCGGATGGTGGACTTCTTGTTGCTTCCCGGGTGGTTCTGCTTGGACTTACCGCGGTACACGTACACGCACCGCTTGCCGATGTAGAACAGGACGTTCTTGCGGTTGCGGCAACCTTCAATCTTCAGCAGAGCGTGCTTCTCGTGCTGGTTGCGGACCCACGCTTGTAGCCGGTGAACACAGCCTTGGCCCACAGACGGCCGAAGCTCTTCTTCGGGCGCGGCAGGTTCGGTTTCGGGGTGCGCACTCCTTCGCACGCTTGACACGGGCACGGATCGCTTCCGGAGTTTGACGCGATTTGCGCGTCTCCCTTCGGGGCAGCCTTCGCGGCGTCACCTTGGCACCAGCCAATGTTCGACACGTCCACCTTGTCGTTCTGCATCTTGAAGTACACGCCGCAGCACGATCAGCGCACGCGCCCATGATGAAGCTGCTCTGCACAGCCAGTATCCGGCGGCCCGCCTTGTCGATCAGCACGGAGGAGGCGAGCGTCATTACGACCTGCACGACACCGACCACAATCGAGCAGACGGCCGGGTCCATGGTGCTGCCGGCCGACTGGAAGATTGGCGCCGTGTAGAAGATGACCGCATTGATGCCCGAGAACTGCTGGAAGAACATCAGCAGCAGCGAGATGAAGAGTGCCGCCCGGTTGGTTGGGT] [+] EMBL CNS097CD [TCTTCACTCGCGCTTTTTTATTGTTGGGGATTCCATTATAAATGTACACACGATTTACTGCGCTTAAATACGCGACGGGTAAAGCATGATTCTGATGCGATGGCCCATGGCGTGTCCGGGCAGGTTGGTGCGGAATCGTGCGCGAACGCTGCCACTGTTACCGTGCGAACGGGTAATCTTGCCCCAGATGGCGCGGATGGTGGACTTCTTGTTGCTTCCCGGGTGGTTCTGCTTGGACTTACCGCGGTACACGTACACGCACCGCTTGCCGATGTAGAACAGGACGTTCTTGCGGTTGCGGCAACCTTCAATCTTCAGCAGAGCGTGCTTCTCGTGCTGGTTGCGGACCCACGCTTGTAGCCGGTGAACACAGCCTTGGCCCACAGACGGCCGAAGCTCTTCTTCGGGCGCGGCAGGTTCGGTTTCGGGGTGCGCACTCCTTCGCACGCTTGACACGGGCACGGATCGCTTCCGGAGTTTGACGCGATTTGCGCGTCTCCCTTCGGGGCAGCCTTCGCGGCGTCACCTTGGCACCAGCCAATGTTCGACACGTCCACCTTGTCGTTCTGCATCTTGAAGTACACGCCGCAGCACGATCAGCGCACGCGCCCATGATGAAGCTGCTCTGCACAGCCAGTATCCGGCGGCCCGCCTTGTCGATCAGCACGGAGGAGGCGAGCGTCATTACGACCTGCACGACACCGACCACAATCGAGCAGACGGCCGGGTCCATGGTGCTGCCGGCCGACTGGAAGATTGGCGCCGTGTAGAAGATGACCGCATTGATGCCCGAGAACTGCTGGAAGAACATCAGCAGCAGCGAGATGAAGAGTGCCGCCCGGTTGGTTGGGT] consensusID : consensus_9412#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 838 fasta sequence [CCGCCCACGCGTCCGCATCAAGTGCTTCACCAAGATCCTGAACGGTGAGCTCGACCATCTGCCGGAGGTGGCCTTCTACATGGTCGGCCCGATCGAGGAGGTCGTCGAGAAGGCGGAGCGTCTGGCCAAGGAGGCTGCCTAAGGTGGCTGAGCCCTCTTCACAGCAAACGCCTGCTGCCATTATCGAATTTCGAACGGTGCGCAGCTA-ACCAACACCACCACCACCACCACCACCAACAACCTGTACTGCTGCCATTCGTCAAAGCAAAAAAGCGGTTCCAAAACTGGCCGTTAGATTTTACTTAGAGAAGAGAATGCGTTTTGACCAGCGAAGAGAAAACCATCAGAAATCGTGGAGCACGAAAGTCGGTTTAAAGCAACTCAATCCCGTCACCACCAACACACACCACCACCATCTCTTACGAAACAACTCGAGCTGCGATTCTAACGTGCGCGCGTAACGACTGCCTTTCAAGACAAATCAGTGTGTGTGTGTGTGGAATGAGCTGACCAGCGTGAAATCCGGCAATGCACCTCCTCCCAAACACTACCATCCATCGCAGCGGATTTTGCAGCGGGTCACCACATTCGGTCATAATCGTTGTTAGAAAAAAAGCAGCCAATCGAATCGAAGAACATCCTAATCTATGAACGACGAACGAAAGAGAGAGAGAGCAAAGAACACGACTCTTAAGGTTCGGTTTTTTGTCGGTGCAAGAGTGTGGGGTAAATGTAGTGTGTATTTGTTGCTTTAAATTCGTTCGAAAATACACGTAATCGATAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAGGTCCCCGGGGGG] [+] EMBL BM652517 [CCGCCCACGCGTCCGCATCAAGTGCTTCACCAAGATCCTGAACGGTGAGCTCGACCATCTGCCGGAGGTGGCCTTCTACATGGTCGGCCCGATCGAGGAGGTCGTCGAGAAGGCGGAGCGTCTGGCCAAGGAGGCTGCCTAAGGTGGCTGAGCCCTCTTCACAGCAAACGCCTGCTGCCATTATCGAATTTCGAACGGTGCGCAGCTA ACCAACACCACCACCACCACCACCACCAACAACCTGTACTGCTGCCATTCGTCAAAGCAAAAAAGCGGTTCCAAAACTGGCCGTTAGATTTTACTTAGAGAAGAGAATGCGTTTTGACCAGCGAAGAGAAAACCATCAGAAATCGTGGAGCACGAAAGTCGGTTTAAAGCAACTCAATCCCGTCACCACCAACACACACCACCACCATCTCTTACGAAACAACTCGAGCTGCGATTCTAACGTGCGCGCGTAACGACTGCCTTTCAAGACAAATCAGTGTGTGTGTGTGTGGAATGAGCTGACCAGCGTGAAATCCGGCAATGCACCTCCTCCCAAACACTACCATCCATCGCAGCGGATTTTGCAGCGGGTCACCACATTCGGTCATAATCGTTGTTAGAAAAAAAGCAGCCAATCGAATCGAAGAACATCCTAATCTATGAACGACGAACGAAAGAGAGAG ] [+] EMBL CNS08P85 [ ctggCGAATTTAAAACGGTGCGCA TAGACCAACACCACCACCACCACCAC CAACCTGTACTGCTGCCATTCGTCAAAGCAAAAAAGCGGTTCCAAAACTGGCCGTTAGATTTTACTTAGAGAAGAGAATGCGTTTTGACCAGCGAAGAGAAAACCATCAGAAATCGTGGAGCACGAAAGTCGATTTAAAACAACTCAATCCCGTCACCACCAACACACACCACCACCATCTCTTACGAAACAACTCGAGCTGCGATTCTAACGTGCGCGCGTAACGACTGCCTTTCAAGACAAATCA GTGTGTGTGTGTGGAATGAGCTGACCAGCGTGAAATCCGGCAATGCACCTCCTCCCAAACACTACCATCCATCGCAGCGGATTTTGCAGCGGGTCACCACATTCGGTCATAATCGTTGTTAGAAAAAAAGCAGCCAATCGAATCGAAGAACATCCTAATCTATGAACGACGAACGAAAGAAAGAGAGAGCAAAGAACACGACTCTTAAGGTTCGGTTTTTTGTCGGTGCAAGAGTGTGGGGTAAATGTAGTGTGTATTTGTTGCTTTAAATTCGTTCGAAAATACACGTAATCGATAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAGGTCCCCGGGGGG] consensusID : consensus_9412#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence [CCGGCCCGATAAGTGTGCGTGTTTTCGTCGACGCCGGTTTTCCACTTGAACACTACAGCCACCAAACTTACCTCAAGCATCATGACCACCTACTTCAACTACCCACCAAAGGAGATTCAGGAGGAGCTGGCCCGCATCGCCAAGCAGATTGTTGCCCCCGGTAAGGGTATTTTGGCCGCCGTGCCCGGCGTCACCTTCCTGTCGGGCGGCCAGTCCGAGGAGGAGGCGTCCGTGAACCTGAGCGCCATCAACCAGGTGCCGCTGCTGAGACCGTGGGCCCTGACCTTCTCGTACGGTCGCGCCCTGCAGGCCTCGGTGCTGCGCGCCTGGGGCGGCAAGAAGGAGAACGTGAAGGCCGCCCAGGAGGAGCTGATCAAGCGCGCAAAGGCCAACAGCGATGCCGCCCTCGGCAAGTACGGCGGTGGTGTGGAGGGTGCCGCCGGTGCTGGCAGCCTGTTCGTCGCCAACCACGCTTACTAAGGCGTTCGTTCGCTCCGCTCTGCATCTACATGAACTTGCATCCCACTAGAACACAACCCTTTAGTACCACCCCACCACCCCCTGTCCCTCGTCCCGCCACATGCACACACACTCGCACAGTGGCAAACAACACTCCCGGAGCGGCAATCTTCGCATTCGGTTACTATGCTGAGTGTAAGTGAAG] [+] EMBL BM656779 [CCGGCCCGATAAGTGTGCGTGTTTTCGTCGACGCCGGTTTTCCACTTGAACACTACAGCCACCAAACTTACCTCAAGCATCATGACCACCTACTTCAACTACCCACCAAAGGAGATTCAGGAGGAGCTGGCCCGCATCGCCAAGCAGATTGTTGCCCCCGGTAAGGGTATTTTGGCCGCCGTGCCCGGCGTCACCTTCCTGTCGGGCGGCCAGTCCGAGGAGGAGGCGTCCGTGAACCTGAGCGCCATCAACCAGGTGCCGCTGCTGAGACCGTGGGCCCTGACCTTCTCGTACGGTCGCGCCCTGCAGGCCTCGGTGCTGCGCGCCTGGGGCGGCAAGAAGGAGAACGTGAAGGCCGCCCAGGAGGAGCTGATCAAGCGCGCAAAGGCCAACAGCGATGCCGCCCTCGGCAAGTACGGCGGTGGTGTGGAGGGTGCCGCCGGTGCTGGCAGCCTGTTCGTCGCCAACCACGCTTACTAAGGCGTTCGTTCGCTCCGCTCTGCATCTACATGAACTTGCATCCCACTAGAACACAACCCTTTAGTACCACCCCACCACCCCCTGTCCCTCGTCCCGCCACATGCACACACACTCGCACAGTGGCAAACAACACTCCCGGAGCGGCAATCTTCGCATTCGGTTACTATGCTGAGTGTAAGTGAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9412#0 CCGCGGACGCGTCCGCGGACGCGTCGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAG 60 consensus_9412#3 ------------------------------------------------------------ consensus_9412#4 ------------------------------------------------------------ consensus_9412#1 ------------------------------------------------------------ consensus_9412#2 ------------------------------------------------------------ consensus_9412#0 CAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACA 120 consensus_9412#3 ------------------------------------------------------------ consensus_9412#4 ------------------------------------------------------------ consensus_9412#1 ------------------------------------------------------------ consensus_9412#2 ------------------------------------------------------------ consensus_9412#0 CGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTG 180 consensus_9412#3 ------------------------------------------------------------ consensus_9412#4 ------------------------------------------------------------ consensus_9412#1 ------------------------------------------------------------ consensus_9412#2 ------------------------------------------------------------ consensus_9412#0 CACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCC 240 consensus_9412#3 ------------------------------------------------------------ consensus_9412#4 ------------------------------------------------------------ consensus_9412#1 ------------------------------------------------GCCTACTGGNGA 12 consensus_9412#2 ------------------------------------------------------------ consensus_9412#0 TTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAA 300 consensus_9412#3 ------------------------------------------------------------ consensus_9412#4 ------------------------------------------------------------ consensus_9412#1 TTTTANTTTCCGACCCCGTGAAGGTTGCTC-CAATTGCACCAGGACGTACAGGGAAGATT 71 consensus_9412#2 ------------------------------------------------------------ consensus_9412#0 TCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCG 360 consensus_9412#3 ------------------------------------------------------------ consensus_9412#4 ------------------------------------------------------------ consensus_9412#1 CCCGTAAAACAACACATTCACTTATTGCCA---CTGGAAGAAGGCAGACCAGCTGAAACA 128 consensus_9412#2 ------------------------------------------------------------ consensus_9412#0 AAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAG---AGATCGGCATGT 417 consensus_9412#3 -CCGCCCACGCGTCCGCATCAAGTGCTTCACCAAGATCCTGAACGGTGAGCTCGAC-CAT 58 consensus_9412#4 ------------------------------------------------------------ consensus_9412#1 AACATTCGGCTGAGGGTGTAAAACTGCAAGACAAAATGAAGGGACT--GCTTCTGCTAGC 186 consensus_9412#2 -----------------------------------------------TCTTCACTCGCGC 13 consensus_9412#0 ACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCA 477 consensus_9412#3 CTGCCGGAGGTGGCCTTCTACATGGT--CGGCCCGATCGAGGAGGTCGTCGAGAAGGCGG 116 consensus_9412#4 ------------------------------------------------------------ consensus_9412#1 AGCCTTGTTGTCGGTAGCCATATCG----GCCACCGTTGCTGATCGGGCAGAGACGCTCA 242 consensus_9412#2 TTTTTTATTGTTGGGGATTCCATTATAAATGTACACACGATTTACTGCGCTTAAATACGC 73 consensus_9412#0 AACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGG 537 consensus_9412#3 AGCGTCTGGCCAAGGAGGCTGCCTAAGGTGGCT----------GAGCCCTCTTCACA-GC 165 consensus_9412#4 ----------------------------------------------CCGGCCCGATAAGT 14 consensus_9412#1 ATCTCTTCAACCAGTTAAAGCGCGTGAAGAAGG-------GTCGCATGCTTGGTGCTGAT 295 consensus_9412#2 GACGGGTAAAGCATGATTCTGATGCGATGGCCCAT--------GGCGTGTCCGGGCAGGT 125 consensus_9412#0 AAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATG 597 consensus_9412#3 AAACGCCTGCTGCCAT-TATCGAATTTCGAACGGTG---CGCAGCTAACCAACACCACCA 221 consensus_9412#4 GTGCGTGTTTTCGTCGACGCCGGTTTTCCACTTGAACACTACAGCCACCAAAC-TTACCT 73 consensus_9412#1 GAGGACTTTGTATCGCTCGTCCAGTCACAGCTATTGC-TGGCCGAAGAAGAGT-ACGTCC 353 consensus_9412#2 TGGTGCGGAATCGTGCGCGA-ACGCTGCCACTGTTACCGTGCGAACGGGTAATCTTGCCC 184 * * consensus_9412#0 GCCTGAACACGATCAACGAGGGAC--GCGTCGCAACGGGCGAC-ATG-TCCGGCTTTTTG 653 consensus_9412#3 CCACCACCACCACCAACAACCTGT--ACTGC-TGCCATTCGTC-AAA-GCAAAAAAGCGG 276 consensus_9412#4 CAAGCATCATGACCACCTACTTCA--ACTACCCACCAAAGGAG-ATT-CAGGAGGAGCTG 129 consensus_9412#1 GCTCGTCCATAAATGGGGAGTCGTCGATTCTGCAGGAGCTGTCCACC-GCGGAAGCACAG 412 consensus_9412#2 CAGATGGCGCGGATGGTGGACTTCTTGTTGCTTCCCGGGTGGTTCTGCTTGGACTTACCG 244 * * * consensus_9412#0 CCCTGCA-CGCCGAACG-GTTGCATGGAGCTGATCAAGCGCACCGGCACACCGATCGCCG 711 consensus_9412#3 TTCCA-A-AACTGGCCG-TTAGATTTTACTTAGAGAAGAGAAT--GCGTTTTGACCAGCG 331 consensus_9412#4 GCCCGCATCGCCAAGCA-GATTGTTGCCCCCGGT-AAGGGTATTTTGGCCGCCGTGCCCG 187 consensus_9412#1 GCAAGTGGCCCGAACTGTGTAGACTTTATCCGCCAGAAGACGGCACTGATGCTGAATCTA 472 consensus_9412#2 CGGTACACGTACACGCACCGCTTGCCGATGTAGAACAGGACGTTCTTGCGGTTGCGGCAA 304 * consensus_9412#0 GCTCGTACGCCGT-TGTGATCGGGCGCAGCAAGATCGTCGGTACGCCGATGTCGGAGCTG 770 consensus_9412#3 AAGAGAAAACCAT-CA-GAAATCGTGGAGCACGAAAGTCGGT---------TTAAAGCAA 380 consensus_9412#4 GCGTCACCTTCCT-GTCGGGCGGCCAGTCCGAGGAGGA-GGCGTCCGTGAACCTGAGCGC 245 consensus_9412#1 GCTGGTGTATCGTATGCGTCCTGCCTGAGCCGTGTCGATGATGCGTTGTTTGAAAAGCTG 532 consensus_9412#2 CCTTCAATCTTCAGCA-GAGCGTGCTTCTCGTGCTGGTTGCGGACCCACGCTTGTAGCCG 363 * * * * *** consensus_9412#0 CTCAAGTGGGCCGATGCC-ACCGTCACGGTGG-CCCACTCGAAGACGAAGAACCTCAACT 828 consensus_9412#3 CTCAATCCCGTCACCACC-AACA-CACACCAC-CACCATCTCTTACGAAACAACTCGAGC 437 consensus_9412#4 CATCAACCAGGTGCCGCT-GCTGAGACCGTGGGCCCTGACCTTCTCGTACGGTCGCGCCC 304 consensus_9412#1 TACGATGCAACGAATGGT-GTGG-TATCGCGCGAACAGTACGAT-CAGGCCAACATGCTT 589 consensus_9412#2 GTGAACACAGCCTTGGCCCACAGACGGCCGAAGCTCTTCTTCGGGCGCGGCAGGTTCGGT 423 * * * consensus_9412#0 TGCTGATTAAGAAG----GCGGACATTCT-GGTGGTTGCCGTCGGGCGTCCGGAGATGGT 883 consensus_9412#3 TGCGATTCTAACGT----GCGCGCGT----AACGACTGCC--------TTTCAAGACAAA 481 consensus_9412#4 TGCAGGCCTCGGTG----CTGCGCGCC---TGGGGCGGCAA-------GAAGGAGAACGT 350 consensus_9412#1 AACGCTTTCCGGGGT---GAGAACATCTT-TGTGGACATGGACCG-TATTCGGGGCAAGC 644 consensus_9412#2 TTCGGGGTGCGCACTCCTTCGCACGCTTGACACGGGCACGGATCGCTTCCGGAGTTTGAC 483 * * * * consensus_9412#0 ACGGGGCGCCTGGATAAAGCCCGGTGCCGTCGTCATCG----ACTGTGGCATCA-ACTCC 938 consensus_9412#3 TCAGTGTGTGTGTGTGTGGAATGAGCTGACCAGCGTGA----AATCCGGCAATGCACCTC 537 consensus_9412#4 GAAGGCCGCCCAGGAGGAGC-TGATCAAGC--GCGCAA----AGGCCAACAGCG-ATGCC 402 consensus_9412#1 TGCAGGAGCGAATGCGTGCCACGTTCAAGC---TGCCG----ACGTTGACTGCGGAATCG 697 consensus_9412#2 GCGATTTGCGCGTCTCCCTT-CGGGGCAGCCTTCGCGGCGTCACCTTGGCACCA--GCCA 540 * * * * consensus_9412#0 ATCCCGGACCCGAACGAGAAGAGTGGCCAGCGGTTGG-TGGGAGACGTAAAGTACGAGGA 997 consensus_9412#3 CTCCCAAACACTA-------------CCATCCATCG--CAGCGGATTT----TGCAGCGG 578 consensus_9412#4 GCCCTCGGCAAGTA-------------CGGCGGTGGTGTGGAGGGTGC----CGCCGGTG 445 consensus_9412#1 TTGCAGGAAATTCGCAGTGAGCTGGGTGAGGTGAAAG-AACAGTTTGCAGAGTGCATGAA 756 consensus_9412#2 ATGTTCGACACGTCC----ACCTTGTCGTTCTGCATCTTGAAGTACACGCCGCAGCACGA 596 consensus_9412#0 GGCACTCCCCGTTGCGTCGCACGTTACGCCGGTACCTGGAGGCGTCGGGCCGATGACGGT 1057 consensus_9412#3 GTCAC--CACATTCGGTCATAATCGTTGTTAGAA--AAAAAGCAGCCAATCGA-ATCGAA 633 consensus_9412#4 CTGGCAGCCTGTT-CGTCGCCAACCACGCTTACT----AAGGCGTTCGTTCGC-TCCGCT 499 consensus_9412#1 GGTGGCACGGGCCACACTGGATACTTCGCTCG------AAAGCACTTCGAAGCAGTACAA 810 consensus_9412#2 TCAGC-GCACGCGCCCATGATGAAGCTGCTCTGCACAGCCAGTATCCGGCGGCCCGCCTT 655 * * * * consensus_9412#0 GGCGATGCTGATGCA-GAAC--ACCGTTCAGTCTGCCCAGAGAGTTGCCCGGAGATTGAT 1114 consensus_9412#3 GAACATCCTAATCTATGAAC--GACGAACGAAAGAGAGAGAGAGCAAAGAACACGACTCT 691 consensus_9412#4 CTGCATCTACATG---AACT--TGCATCCCACTAGAACACAACCCTTTAGTACCACCCCA 554 consensus_9412#1 GTCCATCGAGCTTCCCGAAC--GGGAGGATATGCATTCATGCATCTACATCCAGGTGTGT 868 consensus_9412#2 GTCGATCAGCACGGAGGAGGCGAGCGTCATTACGACCTGCACGACACCGACCACAATCGA 715 ** * consensus_9412#0 CGAGAT----GGAGTTCCGCTGGTGCCTGAAGCCGCTGCCACTG-AAGCTTACCGAACCG 1169 consensus_9412#3 TAAGGT--TCGGTTTTTTGTCGGTGCAAGAGTGTGGGGTAAATG-TAGTGTGTATTTGTT 748 consensus_9412#4 CCACCC--CCTGTCCCTCGTCC-CGCCACATGCACACACACTCG-CACAGTGGCAAACAA 610 consensus_9412#1 --ACGT--TCCGATCTGCCATAGCAATTGGTGATACAGCTTTTT-CCATCTCTAAAAAGA 923 consensus_9412#2 GCAGACGGCCGGGTCCATGGTGCTGCCGGCCGACTGGAAGATTGGCGCCGTGTAGAAGAT 775 * * * consensus_9412#0 GTTCCGAGTGA-CATCGAGATCGCT--CGTGCCCAGGAGCCGAGGGATGTGGCGGTGCTG 1226 consensus_9412#3 GCTTTAAATTC-GTTCGAAAATACA--CGTAATCGATAACAGAAAAAAAAAAAAAAAAAA 805 consensus_9412#4 CACTC---CCG-GAGCGGCAATCTT--CGCATTCGGTTACTATGCTGAGTGTAAGTGAAG 664 consensus_9412#1 GGA-CAAATCA-ATAGAACATCGCTGGTGTGTCCATCTACAGGTTAATGAGGAAGAGAAG 981 consensus_9412#2 GACCGCATTGATGCCCGAGAACTGCTGGAAGAACATCAGCAGCAGCGAGATGAAGAGTGC 835 * * * consensus_9412#0 GCGCAGGAGATTGGGCT------AATACCCGTCGGACGGTTTCGCTGTACGGCACCAAGA 1280 consensus_9412#3 AAAAAAAAAAAAAGGCC------AAAGGTCCCCGGGGGG--------------------- 838 consensus_9412#4 ------------------------------------------------------------ consensus_9412#1 GGCAACATAACCGCTTCTTGCAGGATACCTACCCATGAGTGTGTTTGTTCTAATTGGCTA 1041 consensus_9412#2 CGCCCGGTTGGTTGGGT------------------------------------------- 852 consensus_9412#0 AGGCGAACGTATCGCTGAAGGTGCTGCAGCGGCT 1314 consensus_9412#3 ---------------------------------- consensus_9412#4 ---------------------------------- consensus_9412#1 CAGCAACAAAACGATACGC--------------- 1060 consensus_9412#2 ---------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||