These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9415#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1487 fasta sequence [CGCCCGAGGTTTAATACATGCTACGATTGAGTCATATAGACACACCACCAGTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA-TTGGAGAGGCACAGTTTTCG-TTGAGCAAG-TATAACACATTCCACCGGAAGGTGAAA-CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG-AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACAGCTATAACAGAACTTACCCCGTCTGTGTGGGTGTGTAACAGATGGTCTGATAATTGTTTGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGCAAAATATATCGATTCAAGATATACCAATTAAAGTGATTTTATTTTGGCCATTGGTTCTCACTGATTTGTGACCCAACAACTCTTTGTTTTTGGTCCAATGTGAGCTCGCATAGAGCTTTCTCACATCCAAATATTTGTGAACGATATAAGCAAAATATTATTTTGATATCTTTCTGGATCAACTTCACTTAACGGTTGTTTTTCATTAATTTGTGGATTTTTTATGTTTTCGTCGGTATCTTCTAGTAGTACTATCTATGCGATAGGCCGAACAATAATCAGCCCACCTGTTAGTTCAATCCATCGATAAATGTCGAAGGACATTGCACTGCCCAGACGGAAGTAAACAATGAGCGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCACTACCCAGTACTACGTGCATGACGAATTAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAGATCAAAAAAAAAAAAAAAA] [+] EMBL AL930596 [CGCCCGAGGTTTAATACATGCTACGATTGAGTCATATAGACACACCACCATTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGACTTGGAGAGGCACAGTTTTCGCTTGAGCAAGCTATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGCAGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCG CACAATCGG ACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACATATGATATGCCCCAGTTGCCATGCAGAAGTGAAT ] [+] EMBL BX603612 [ GATTGAGTCATATAGACACACCACCAGTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGGCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGTAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATTGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTTTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTACGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACAGCTATAACAGAACTTACCCCGTCTGTGTGGG ] [+] EMBL CNS09DSC [ TATAGACACACCACCAGTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGTAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TGGAGCAAG TATAACAAATTCCACCGGAAGG GAAACCGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAA CCGTA GAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACA CTATAACAGAACTTACCCCGTCTGTGTGGGTGTGT ACAGATGGTCTGATAATTGTTTGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGCAAAATATATCGATTCAAGATATACCAATTAAAGTGATTTTATTTTGGCCATTGGTTCTCACTGATTTGTGACCCAACAACTCTTTGTTTTTGGTCCAATGTGAGCTCGCATAGAGCTTTCTCACAT ] [+] EMBL BM615868 [ CCGGTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGTCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCATGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGT ] [+] EMBL BM654362 [ ccgATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCTACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACATATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTATTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGG ] [+] EMBL BX602503 [ GAAAAGAGTGCGTGCGACGGCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGTAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CTGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATTGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTACGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACAGCTA ] [+] EMBL BM595017 [ ccgGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCATTTGCCATGCAGAAGTGAATACTAAGACGACTACATCGCCAGGAATGATTGCCTATGTGTCCGGGTATCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGG ] [+] EMBL BM578151 [ ccgGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTG ] [+] EMBL BX607823 [ AGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TGGAGCAAG TATAACAAATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACAGCTATAACAGAACTTACCCCGTCTGTGTGGGTGTGTAACAGATGGTCTGATAATTGTTTGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGC ] [+] EMBL AGA281933 [ CATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATTGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAACCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGA ] [-] EMBL CNS09DSD [ CCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGAACAGGCGATAAACCTGCGCGACAGCTATAACAGAACTTACCCCGTCTGTGTGGGTGTGTAACAGATGGTCTGATAATTGTTTGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGCAAAATATATCGATTCAAGATATACCAATTAAAGTGATTTTATTTTGGCCATTGGTTCTCACTGATTTGTGACCCAACAACTCTTTGTTTTTGGTCCAATGTGGGCTCGCATAGAGCTTTCTCACATCCAAATATTTGTGAACGATATAAGCAAAATATTATTTTGATATCTTTCTGGATCAACTTCACTTAACGGTTGTTTTTCATTAATTTGTGGATTTTTTATGTTTTCGTCGGTATCTTCTAGTAGTACTATCTATGCGATAGGCCGAACAATAATCAGCCCACCTGTTAGTTCAATCCATCGATAAATGTCGAAGGACATTGCACTGCCCAGACGGAAGTAAACAATGAGCGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCACTACCCAGTACTACGTGCATGACGAATTAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAGATCAAAAAAAAAAAAAAAA] [-] EMBL AGA280237 [ TTCTCACTGATTTGTGACCCAACAACTCTTTGTTTTTGGTCCAATGTGAGCTCGCATAGAACTTTCTCATATCCAAATATTTGTGAACGATATAAGCAAAATATTATTGTGATATCTTTCTGGATCAACTTCACTTAACGGTTGTTTTTCATTAATTTGTGGATTTTTTATGTTTTCGTCGGTATCTTCTAGTAGTACTATCTATGTGATA CCGAcgaaa ] consensusID : consensus_9415#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 800 fasta sequence [TTGCACTGCCCAGACGGAAGTAAACAATGAACGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCATTACCCAGTACTACGTGCATGACGAAATAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAAATCAAAATTTTATCGATGCACTTCGAATTCTCACATTAATAATATGTGTGTGTGTAACGAAAAGCTTAGAATGTGGTTAACATTAGCATTGTATGCATACTAAATTCTTCGTTATTATTCATAATTATTACTACCGTTATCATTAATTATTATGCACGACTTAACTTTACTGTAGTTCTCCACTTTTTGTTAATGCTTCCGTTAGATTCAAACGACAAAAAAGCGTTACAAATCGTGTAAGTGGTTTGGTAAATGGTTATATTGTTTACAGTTATCTTTCTGCTTTGTACCGGGGAGTAATTGATCGTGTTGCGTGCATCTATTTTCTATATTAACACACAATGTTCGGAAACAAGAGTTGGTTTATGCTCTCGCCAAGGGTATGTGCCATGAGCGTTGGCCATCGTTTTGATTGCGAGGATGATATTTTACGAAGGATTGCTTTAATGGTGATCTGAGTTGAANCCTCCCGTATACATTTTATAAAACGCTAGGTCAAATTCATCTAATAAATAAACCGAAAT] [+] EMBL BX623777 [TTGCACTGCCCAGACGGAAGTAAACAATGAACGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCATTACCCAGTACTACGTGCATGACGAAATAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAAATCAAAATTTTATCGATGCACTTCGAATTCTCACATTAATAATATGTGTGTGTGTAACGAAAAGCTTAGAATGTGGTTAACATTAGCATTGTATGCATACTAAATTCTTCGTTATTATTCATAATTATTACTACCGTTATCATTAATTATTATGCACGACTTAACTTTACTGTAGTTCTCCACTTTTTGTTAATGCTTCCGTTAGATTCAAACGACAAAAAAGCGTTACAAATCGTGTAAGTGGTTTGGTAAATGGTTATATTGTTTACAGTTATCTTTCTGCTTTGTACCGGGGAGTAATTGATCGTGTTGCGTGCATCTATTTTCTATATTAACACACAATGTTCGGAAACAAGAGTTGGTTTATGCTCTCGCCAAGGGTATGTGCCATGAGCGTTGGCCATCGTTTTGATTGCGAGGATGATATTTTACGAAGGATTGCTTTAATGGTGATCTGAGTTGAANCCTCCCGTATACATTTTATAAAACGCTAGGTCAAATTCATCTAATAAATAAACCGAAAT] [+] EMBL BX616471 [ GAAGTAAACAATGAACGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCACTACCCAGTACTACGTGCATGACGAATTAG ACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAAATCAAAATTTTATCGATGCACTTCGAATTCTCACATTAATAATATGTGTGTGTGTAACGAAAAGCTTAGAATGTGGTTAACATTAGCATTGTATGCATA ] consensusID : consensus_9415#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence [CCGCCCACGCGTCCGGAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTCCACCGGAAGGTGAAACGGCCAACGTCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGAGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCATGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGC] [+] EMBL BM587260 [CCGCCCACGCGTCCGGAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTCCACCGGAAGGTGAAACGGCCAACGTCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGAGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCATGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGC] consensusID : consensus_9415#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 516 fasta sequence [ATGGCTCAGGCAGAATCGCCNGCAGGGTTAACATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTCCACCGGAAGGTGAAACGGCAACGCCAAAGGCAACGAATTTGCACAACTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGAGTAACGCAGCTGCACTTGTGAGGATTTTAATCACACAAAGCATGACTAAAGATGGACCACACGTACGGGTTCGTGCCGCACAATCGGCGACACCGAGCTATGCGCAAGCCGTAAGGANGGTGTTCCTCCGTCGAGCCCCGTTCAACCGCAGAAACCGGTACTGACCGGGAGCACAGNATCGTTAACACAGGTACGTGCCCGATCGGGCCCCCAAGTCGAC] [+] EMBL AL697252 [ATGGCTCAGGCAGAATCGCCNGCAGGGTTAACATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTCCACCGGAAGGTGAAACGGCAACGCCAAAGGCAACGAATTTGCACAACTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGAGTAACGCAGCTGCACTTGTGAGGATTTTAATCACACAAAGCATGACTAAAGATGGACCACACGTACGGGTTCGTGCCGCACAATCGGCGACACCGAGCTATGCGCAAGCCGTAAGGANGGTGTTCCTCCGTCGAGCCCCGTTCAACCGCAGAAACCGGTACTGACCGGGAGCACAGNATCGTTAACACAGGTACGTGCCCGATCGGGCCCCCAAGTCGAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 -------------------------------------------------------ATGGC 5 consensus_9415#0 -----------------------------CGCCCGAGGTTTAATACATGCTACGATTGAG 31 consensus_9415#1 TTGCACTGCCCAGACGGAAGTAAACAATGAACGAACGAAGAGAAATTGTATCGTATGTGT 60 consensus_9415#2 -------------CCGCCCACGCG------TCCGGAA-AGAGTGCGTGCGACGTCTGTG- 39 consensus_9415#3 TCAGGCAGA---ATCGCCNGCAGGGTTAACATCGAAA-AGAGTGCGTGCGACGTCTGTG- 60 consensus_9415#0 TCATATAGACACACCACCAGTGAAGGAAGCATCGAAA-AGAGTGCGTGCGACGTCTGTG- 89 consensus_9415#1 GTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTC 120 * * * *** * * ** * *** consensus_9415#2 -TGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTT 98 consensus_9415#3 -TGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTT 119 consensus_9415#0 -TGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTT 148 consensus_9415#1 TTGAAACTTGAGCTACTCTA--TCATCATTACCCAGTACTACGTGCATGACG-AAATAGC 177 ** * * *** ** * * * **** * * * * * * * **** consensus_9415#2 GCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTC--- 155 consensus_9415#3 GCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTC--- 176 consensus_9415#0 GCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTC--- 205 consensus_9415#1 ACCGATCTTCAGT-GTTAGGGCAAATGTAGGGCTAATTGGG-GCGTCGAATTGATTTTAG 235 * ***** * ** * * ** * ** * *** * ** ** *** consensus_9415#2 CACCGGAAGGTGAAACGGCC--AACGT--CAAAGGCAACGAATT-------------TGC 198 consensus_9415#3 CACCGGAAGGTGAAACGGC---AACGC--CAAAGGCAACGAATT-------------TGC 218 consensus_9415#0 CACCGGAAGGTGAAACGGCC--AACGC--CAAAGGCAACGAATT-------------TGC 248 consensus_9415#1 CAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAAATCAAAATTTTATCGATGC 295 ** *** ******* * **** **** * * *** *** consensus_9415#2 AC---AACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCC 255 consensus_9415#3 AC---AAC-TCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCC 274 consensus_9415#0 AC---AACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCC 305 consensus_9415#1 ACTTCGAATTCTCACATTAATAATATGTGTGTGTGTAACGAAAAGCTTAGAATGTGGTTA 355 ** * ** *** *** * * *** * *** * * ** * * consensus_9415#2 AAGCTGCCACCGAACGCAGA--GAGTAACGCAGCTGCACTTGTGAGGATTT-AATCA--- 309 consensus_9415#3 AAGCTGCCACCGAACGCAGA--GAGTAACGCAGCTGCACTTGTGAGGATTTTAATCA--- 329 consensus_9415#0 AAGCTGCCACCGAACGCAGA--GAGTAACGCAGCTGCACTTGTGAGGATTT-AATCA--- 359 consensus_9415#1 ACATTAGCATTGTATGCATACTAAATTCTTCGTTATTATTCATAATTATTACTACCGTTA 415 * * ** * * *** * * * * * * * * *** * * consensus_9415#2 -CACAAAG-ATGACTAAAGATGGACCACCACCGTA-----CGGGTTCATGCCGCCACAAT 362 consensus_9415#3 -CACAAAGCATGACTAAAGATGGACCACA--CGTA-----CGGGTTCGTGCCGC-ACAAT 380 consensus_9415#0 -CACAAAG-ATGACTAAAGATGGACCACCACCGTA-----CGGGTTCGTGCCGCCACAAT 412 consensus_9415#1 TCATTAATTATTATGCACGACTTAACTTTACTGTAGTTCTCCACTTTTTGTTAATGCTTC 475 ** ** ** * * ** * * *** * ** ** * consensus_9415#2 CGGCACCACCGAGCTATGCGCAAGCCGTAGG--AGGTGT---TCCTCCGTCGAGC--CCG 415 consensus_9415#3 CGGCGACACCGAGCTATGCGCAAGCCGTAAGGANGGTGT---TCCTCCGTCGAGC--CCC 435 consensus_9415#0 CGGCACCACCGAGCTATGCGCAAGCCGTAGG--AGGTGT---TCCTCCGTCGAGC--CCG 465 consensus_9415#1 CGTTAGATTCAAACGACAAAAAAGCGTTACAAATCGTGTAAGTGGTTTGGTAAATGGTTA 535 ** * * * * **** ** **** * * * * consensus_9415#2 TTCACACCGCAGCAACCGGTACTGACCGG-AGCACAGA-TCGTTACCACGGTCGTG---C 470 consensus_9415#3 GTTCAACCGCAGAAACCGGTACTGACCGGGAGCACAGNATCGTTAACACAGGTACGTGCC 495 consensus_9415#0 TTCACACCGCAGCAACCGGTACTGACCGG-AGCACAGA-TCGTTACCACGGTCGTG---C 520 consensus_9415#1 TATTGTTTACAGTTATCT-TTCTGCTTTGTACCGGGGAGTAATTGATCGTGTTGCG---T 591 *** * * * *** * * * * * ** * * consensus_9415#2 CGATCGGGCCCC--AGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATAC 528 consensus_9415#3 CGATCGGGCCCCCAAGTCGAC--------------------------------------- 516 consensus_9415#0 CGATCGGGCCCC--AGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATAC 578 consensus_9415#1 GCATCTATTTTCTATATTAACACACAATGT-----TCGGAAACAAGAGTTGGTTTATGCT 646 *** * * ** consensus_9415#2 TAAGACGACAACATCGCCAGGAAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGT 588 consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 TAAGACGACAACATCGCCAGGAA-TGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGT 637 consensus_9415#1 CTCGCCAAGGGTATGTGCCATGAGCGTTGGCCATCGTTTTGATTGCGAGGATGATATTTT 706 consensus_9415#2 TCGGATGCTGGTTAGGATGC---------------------------------------- 608 consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 TCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTAC 697 consensus_9415#1 ACGAAGGATTGCTTTAATGGTGATCTGAGTTGAANCCTCCCGTATACATTTTATAAAACG 766 consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 ATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGA 757 consensus_9415#1 CTAGGTCAAATTCATCTAATAAATAAACCGAAAT-------------------------- 800 consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 CAGCTATAACAGAACTTACCCCGTCTGTGTGGGTGTGTAACAGATGGTCTGATAATTGTT 817 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 TGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGCAAAATATA 877 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 TCGATTCAAGATATACCAATTAAAGTGATTTTATTTTGGCCATTGGTTCTCACTGATTTG 937 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 TGACCCAACAACTCTTTGTTTTTGGTCCAATGTGAGCTCGCATAGAGCTTTCTCACATCC 997 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 AAATATTTGTGAACGATATAAGCAAAATATTATTTTGATATCTTTCTGGATCAACTTCAC 1057 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 TTAACGGTTGTTTTTCATTAATTTGTGGATTTTTTATGTTTTCGTCGGTATCTTCTAGTA 1117 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 GTACTATCTATGCGATAGGCCGAACAATAATCAGCCCACCTGTTAGTTCAATCCATCGAT 1177 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 AAATGTCGAAGGACATTGCACTGCCCAGACGGAAGTAAACAATGAGCGAACGAAGAGAAA 1237 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 TTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTAT 1297 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 CGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCACTACCCAGTACTACGTGCA 1357 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 TGACGAATTAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAA 1417 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ------------------------------------------------------------ consensus_9415#3 ------------------------------------------------------------ consensus_9415#0 TTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAGATCAAAAAA 1477 consensus_9415#1 ------------------------------------------------------------ consensus_9415#2 ---------- consensus_9415#3 ---------- consensus_9415#0 AAAAAAAAAA 1487 consensus_9415#1 ---------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||