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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9416#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1083 fasta sequence
[GCTCGAGCAGATCCCGAGTTATTGATCGCAAACAGAAGGGTAAACAGCTTTTTTGGACCATTTCATCTTACGTGCAAAACAAAAACCATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCTGTGNAACGAAGCAAACACCAGTTGCCCCTCTTCTTGTATCAGCATCCACACCCGGCACAGCACAGTGCTGCATTGCAGTTTCTGCCAAGCTTTGCCCCATCGGAATTACATAAAAACTCGGGCAATCCAACGCAGCACAGCAAATGCCACCCGTAGCTTGCAACCACAAANCTATTCCAAACCCACGGTACAGCACATNACGTAGTGCCGCCGTGTNGTCAAATAGGGGNAAAGGCGCCTANGGTCCGCCACTAGGCTATCATTCCGGAACANAGGGCACNGAAAAAGATTCGGANCCCATCCTCCGGNNAGCCGGTNGAAGTTTTCACCAATAACCAGGACGGTATCCCAAAGGCNGGNCGGACTGNGGAGACAACAAGTATACAAAAACTGCGACAAAAAAAGCAACATAGACCGGCAAAAATTCAGCGTNGGGTGGGTGACGACAATTTCCCATTTAAAACCCNATGACAAAGGCCAGGCTNACCTGAGCTTCGTNCCGTTGGGACCCCACACTCGGNAGTAGGCCAGCCGGCCCCTNACCCTTTGGCCNCCACATGCNNTTCGAGGCCTACCTACNTTTNAACCCGCGNGGACTCCTTTGCGGACNNCTCAGGGGCCGGCCGACTGAACCGCACCANAGGGGCGGACCCGTTAACAGTACCNGGCAGCGAATACCACNCCCCGNTACGANACCGAAGTCGAACCGGAACATCAGCACGCACACAAAAGACGGGAACCAGGNCCGCNTACGCNAANGCGAACACGGCACNCGCAAACACNTTTCACCACCATAGGCCTCCACGGAACACACACCGNGGGAAGCGTGGNTNNGTACAAACGGCCGGAACANCTACACACCAGCGGCACGCCAACACAANAATGGCAGCACACCGCACAGAGCCNGCGCTAGGNGAACTACCACAG]
[+] EMBL AL695214 [GCTCGAGCAGATCCCGAGTTATTGATCGCAAACAGAAGGGTAAACAGCTTTTTTGGACCATTTCATCTTACGTGCAAAACAAAAACCATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCTGTGNAACGAAGCAAACACCAGTTGCCCCTCTTCTTGTATCAGCATCCACACCCGGCACAGCACAGTGCTGCATTGCAGTTTCTGCCAAGCTTTGCCCCATCGGAATTACATAAAAACTCGGGCAATCCAACGCAGCACAGCAAATGCCACCCGTAGCTTGCAACCACAAANCTATTCCAAACCCACGGTACAGCACATNACGTAGTGCCGCCGTGTNGTCAAATAGGGGNAAAGGCGCCTANGGTCCGCCACTAGGCTATCATTCCGGAACANAGGGCACNGAAAAAGATTCGGANCCCATCCTCCGGNNAGCCGGTNGAAGTTTTCACCAATAACCAGGACGGTATCCCAAAGGCNGGNCGGACTGNGGAGACAACAAGTATACAAAAACTGCGACAAAAAAAGCAACATAGACCGGCAAAAATTCAGCGTNGGGTGGGTGACGACAATTTCCCATTTAAAACCCNATGACAAAGGCCAGGCTNACCTGAGCTTCGTNCCGTTGGGACCCCACACTCGGNAGTAGGCCAGCCGGCCCCTNACCCTTTGGCCNCCACATGCNNTTCGAGGCCTACCTACNTTTNAACCCGCGNGGACTCCTTTGCGGACNNCTCAGGGGCCGGCCGACTGAACCGCACCANAGGGGCGGACCCGTTAACAGTACCNGGCAGCGAATACCACNCCCCGNTACGANACCGAAGTCGAACCGGAACATCAGCACGCACACAAAAGACGGGAACCAGGNCCGCNTACGCNAANGCGAACACGGCACNCGCAAACACNTTTCACCACCATAGGCCTCCACGGAACACACACCGNGGGAAGCGTGGNTNNGTACAAACGGCCGGAACANCTACACACCAGCGGCACGCCAACACAANAATGGCAGCACACCGCACAGAGCCNGCGCTAGGNGAACTACCACAG]
consensusID : consensus_9416#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 802 fasta sequence
[AAAGGCGGCGGAATTCCTCGAGAACTGTTGGCCCACTGGGTTGCTTTTGGGCTACAGATTGCATCGCAAACAGAAAGCTTAACAGTGAAGCCTTTTTTGGGCCTTTTCGACTTACAGTAAAGCATAATGTAAAATTGCAAAACAAAAACCCTAAGTCTTATCAATCTTGCTCGTGATCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCAGAACAAGCAAAACAGTTGCGCTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAGTACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTGGCTGCAAAAAAACTATCAACCACGTATGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACCAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAATCCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGT-GGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTCGACACGGAG-TGTGTAAGCGAGTACAGGGAAAAATTGCACCCCGAGCCGGTGGATCAGGCGCCGGAAGCAGAAGCAACGAAGCAACCGCCCACCCGGAGGGAGGTGTTGGCGGAAACGGATCCGGCCATGCTGCAAC]
[-] EMBL CNS0996G [AAAGGCGGCGGAATTCCTCGAGAACTGTTGGCCCACTGGGTTGCTTTTGGGCTACAGATTGCATCGCAAACAGAAAGCTTAACAGTGAAGCCTTTTTTGGGCCTTTTCGACTTACAGTAAAGCATAATGTAAAATTGCAAAACAAAAACCCTAAGTCTTATCAATCTTGCTCGTGATCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCAGAACAAGCAAAACAGTTGCGCTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAGTACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTGGCTGCAAAAAAACTATAAACCACGTATGAAACTGTGCGCGGTGAACTGGAAGCGCTTGTCGAACTGCTTATCGACAGCACCAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAATCCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGTTCTGGAGT GGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTCGACACGGAG TGTGTAAGCGAGTACAGGGAAAAATTGCACCCCGAGCCGGTGGTTCAGGCGCCGGAAGCAGAAGCAACGAAGCAACCGCCCACCCGGAGGGAGGTGTTGGCGGAAACGGATCCGGCCATGCTGCAAC]
[+] EMBL CNS0996F [ TGAAGCCTTTTTTGGGCCTTTTCGACTTACAGTAAAGCATAATGTAAAATTGCAAAACAAAAACCCTAAGTCTTATCAATCTTGCTCGTGATCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCAGAACAAGCAAAACAGTTGCGCTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAGTACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTATGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACCAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAATCCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGT GGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTCGACACGGAG TGTGTTAGCGAGTACAGGGAAAAATTGCACCCCGAGCCGGTGGATCAGGCGCCGGAAGCAGAAGCAACGAAGCAACCGCCCACCCGGAGGAGGGTGTTGGCGGAAACGGATCCGGCCATGCTGCAA ]
[+] EMBL BX618208 [ gGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCGCTTTTTGTTAGAACAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAGTACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTTGCCGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACCAAGCTCGCCCTCTCGGAGCGTGAGTTCCACACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGT GGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTCGACACGGAG TGTGTAAGCGAGTACAGGGAAAAATTGCACCCCGAGCCGGTGGATCAGGCGCCGGAAGCAGAAGCAACGAAGCAACCGCCCACCCGGAGGGAGGTGTTGGCGGAA ]
[+] EMBL CNS08HD9 [ TGATCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCAGAACAAGCAAAACAGTTGCGCTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAGTACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTATGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACCAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAATCCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGT GGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTCGACACGGAGTTGT TAAGCGAGTACAGGGAAAAATTGCACCCCGAGCCGGTGGATCAGGCGCCGGAAGCAGAAGCAACGAAGCAACCGCCCACCCGGAGGAAGGTGTTGGCGGAAACGGATCCGGCCATGCTGCAA ]
[+] EMBL AGA285355 [ GCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGTGCTTTTTGTTAGAACAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAGTACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTTGCCGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACCAAGCTCGCCCTCTCGGAGCGTGAGTTCCACACCGTCGTTCAA ]
[-] EMBL CNS08HDA [ GCTCGCCTAATTCGACCAGAACAAGCAAAACAGTTGCGCTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGATTGCCATCGAGTACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTGGCTGCAAAAAAACTATTAACCACGTATGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGTACTGCTTATCGACAGCACCAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAATCCGAAATACTGTGGCAATTCATAACCAGAAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGTTCTGGAGTCGGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTCGACACGGAG TGTGTAAGCGAGTACAGGGAAAAATTGCACCCCGAGCCGGTGGTTCAGGCGCCGGAAGCAGAAGCAACGAAGCAACCGCCCACCCGGAGGGAGGTGTTGGCGGAAACGGATCCGGCCATGCTGCAAC]
[+] EMBL BX618424 [ ATCGACAGCACCAAGCTCGCCCTCTCGGAGCGTGAGTTCCACACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGT GGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTCGACACGGAG TGTGTAAGCGAGTACAGGGAAAAATTGCACCCCGAGCCGGTGGATCAGGCGCCGGAAGCAGAAGCAACGAAGCAACCGCCCACCCGGAGGGAGGTGTTGGCGGAAACGGATCCGGCCATGCTGCAA ]
[-] EMBL AGA284059 [ GTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATATCCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGT GGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTCGACACGGAG TGTGTAAGCGAGTACAGGGAAAAATTGCACCCCGAGCCGGTGGATCAGGCGCCGGAAGCAGAAGCAACGAAGCAACCGCCCACCCGGAGGGAGGTGTTGGCGGAAACGGATCCGGCCATGCTGCAAC]
consensusID : consensus_9416#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 758 fasta sequence
[CGNCCGAGGTCAGATTTGTTGTTGCTTTGGGCTAAAGATTGCATCGCAAACAGAAGGGTAAACAGCCTTTTTTGGACCATTTCATCTTACGTGCAAAACAAAAACCATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCACTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAATACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACGAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGTGGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTAGACACGGAGTGTGTAAGCGAATACAGGGACAAATTGCA-CCCCGAGCCGGTGGATCATGCGCCGGAAACAGAGACAACGAAGCAACCGCCCACCC-GGANGGANGTGTTGGCGGAAACGGATCCGGCCATGCTGCAAC]
[+] EMBL AL693440 [CGNCCGAGGTCAGATTTGTTGTTGCTTTGGGCTAAAGATTGCATCGCAAACAGAAGGGTAAACAGCCTTTTTTGGACCATTTCATCTTACGTGCAAAACAAAAACCATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCAC TTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAATACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACGAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCA ]
[+] EMBL BX623578 [ CTTTTTTGGACCATTTCATCTTACATGCAAAACAAAAACCATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCACTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAGTACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTTGCCGCAAAAAAACTCTCAACCACGTACGAAACTGTGCGCGGTGCGCTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACCAAGCTCGCCCTCTCGGAGCGTGAGTTCCACACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGTGGCGCATCGAGGGGCGTATCGCTTCGCGCACGATACGATCACAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTAGATACGGAGTGTGTCAGCGAGTACAGGGACAAATTGCA CCCCGAGCCGGTGGACCATGCGCCGGAAACAGAAGCAACGAAGCAACCGCCCACCC GGANGGANGTGTTGGCGGAAACGGATCCGGCCATGCTGCAAC]
[+] EMBL BX628408 [ TTTTTTGGACCATTTCATCTTACGTGCAAAACAAAAACCATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCACTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAATACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACGAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGTGGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTAGACACGGAGTGTGTAAGCGAATACAGGGACAAATTGCA CCCCGAGCCGGTGGATCATGCGCCG ]
[+] EMBL BX620099 [ GACCATTTCATCTTNCNTGCAAAACAAAAACCATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCACTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAATACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACGAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCNCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGTGGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTAGACACGGAGTGTGTAAGCGAATACAGGGACAAATTGCACCCCCGAGCCGGTGGATCATGCGCCGGAAACAGAGACAACGAAGCAACCGCCCACC ]
[+] EMBL BX623287 [ CATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCACTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAATACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACGAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGTGGCGCATCGAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGNTATTAAGATG ]
[+] EMBL BX611177 [ TCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCACTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAATACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACGAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCTTCCTGCCAGGATGAGCTCTACTTCCGCGATCTGGAGTGGCGCATCGATGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAAGATGAAGTTCCATCTAGACACGGAGTGTGTAAGCGAATACAGGGACAAATTGCA CCCCGAGCCGGTGGATCATGCGCCGGAAACAGAGACAACGAAGCAACCGCCCACCCGGGAGGGAGGTATTGG ]
consensusID : consensus_9416#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 599 fasta sequence
[GATCCCGAGGTTAAACAAAACATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCACTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAATACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACGAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGCATGAGCTCTACTTCCGCGATCTGGAGTGGCGCATCGCAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAACGATGAAGTTCCATCTAGACAACGGAGTGTGTAAGCGAATACAGGGACAAATTGCACCCCGAGCCGGTGGATCATG]
[+] EMBL AL933689 [GATCCCGAGGTTAAACAAAACATAGGTCTTATCAATCTTGCTCGTAGTCGAGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCGGAACAAGCAAAACAGTTGCACTTTTTGTTAGATCAACCGGAAGAAGTGCTGATTGAGTTTTGCAAGCTTGCCATCGAATACATAAACTCGGGAATCAACGAGAAGAAATGCACCGTAGCTGCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGGTGCACTGGAAGCGCTTGTCGCACTGCTTATCGACAGCACGAAGCTCGCCCTCTCGGAGCGTGAGTTCCATACCGTCGTTCAAGCGGCGCTGGAAACGATCAACGAAAAGCAAACCGAAATACTGTGGCAATTCATAACCAGCAAGCGCACGCTGGTGGACAATGTGTTGCGCGCCTCCTGCCAGGCATGAGCTCTACTTCCGCGATCTGGAGTGGCGCATCGCAGGGGCGTATCGCTTCCCGCACGATACGATCGCAAGCGACGCCGGTTATTAACGATGAAGTTCCATCTAGACAACGGAGTGTGTAAGCGAATACAGGGACAAATTGCACCCCGAGCCGGTGGATCATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9416#1 AAAGGCGGCGGAATTCCTCGAGAACTGTTGGCCCACTGGGT-TGCTTTTGGGCTACAGAT 59
consensus_9416#3 ------------------------------------------------------------
consensus_9416#2 ---------------------CGNCCGAGGTCAGATTTGTTGTTGCTTTGGGCTAAAGAT 39
consensus_9416#0 ----------------------------------GCTCGAGCAGATCCCGAGTTATTGAT 26
consensus_9416#1 TGCATCGCAAACAGAAAGCTTAACAGTGAAGCCTTTTTTGGGCCTTTTCGACTTACAGTA 119
consensus_9416#3 ------------------------------------------------------------
consensus_9416#2 TGCATCGCAAACAGAAGGGTAAACAG-----CCTTTTTTGGACCATTTC----------- 83
consensus_9416#0 -----CGCAAACAGAAGGGTAAACAG------CTTTTTTGGACCATTTC----------- 64
consensus_9416#1 AAGCATAATGTAAAATTGCAAAACAAAAACCCTAAGTCTTATCAATCTTGCTCGTGATCG 179
consensus_9416#3 ------GATCCCGAG--GTTAAACAAAA--CATAGGTCTTATCAATCTTGCTCGTAGTCG 50
consensus_9416#2 -------ATCTTACGT-GCAAAACAAAAACCATAGGTCTTATCAATCTTGCTCGTAGTCG 135
consensus_9416#0 -------ATCTTACGT-GCAAAACAAAAACCATAGGTCTTATCAATCTTGCTCGTAGTCG 116
** * ******** * ** ******************** ***
consensus_9416#1 AGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACC---AGAAC-AAGCAAAA--CA 233
consensus_9416#3 AGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACC---GGAAC-AAGCAAAA--CA 104
consensus_9416#2 AGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACC---GGAAC-AAGCAAAA--CA 189
consensus_9416#0 AGCTGTGTAGCTCCCACAAATGGCTCGCCTAATTCGACCTGTGNAACGAAGCAAACACCA 176
*************************************** *** ******* **
consensus_9416#1 GTTGCGCTTTTTGTTAGATCAAC---------CGGAAGA----AGTGCTG-ATTG-AGTT 278
consensus_9416#3 GTTGCACTTTTTGTTAGATCAAC---------CGGAAGA----AGTGCTG-ATTG-AGTT 149
consensus_9416#2 GTTGCACTTTTTGTTAGATCAAC---------CGGAAGA----AGTGCTG-ATTG-AGTT 234
consensus_9416#0 GTTGCCCCTCTTCTTGTATCAGCATCCACACCCGGCACAGCACAGTGCTGCATTGCAGTT 236
***** * * ** ** **** * *** * * ******* **** ****
consensus_9416#1 TTG--CAAGCTTG---CCATCGAG--TACATAAA--CTCGGGAA--TCAACG----AGAA 323
consensus_9416#3 TTG--CAAGCTTG---CCATCGAA--TACATAAA--CTCGGGAA--TCAACG----AGAA 194
consensus_9416#2 TTG--CAAGCTTG---CCATCGAA--TACATAAA--CTCGGGAA--TCAACG----AGAA 279
consensus_9416#0 TCTGCCAAGCTTTGCCCCATCGGAATTACATAAAAACTCGGGCAATCCAACGCAGCACAG 296
* ******* ****** ******** ****** * ***** * *
consensus_9416#1 GAAATGCA--CCGTGGCT----GCAAAAAAACTATCAACCACGTATGAAACTGTGCGCGG 377
consensus_9416#3 GAAATGCA--CCGTAGCT----GCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGG 248
consensus_9416#2 GAAATGCA--CCGTAGCT----GCAAAAAAACTATCAACCACGTACGAAACTGTGCGCGG 333
consensus_9416#0 CAAATGCCACCCGTAGCTTGCAACCACAAANCTATTCCAAACCCACGGTACAGCACATNA 356
****** **** *** * * *** **** ** * * ** * *
consensus_9416#1 TGCACTGGAAGCGC-TTGTCGCAC-----------TGCTTATCGACAGCACCAAGCTCGC 425
consensus_9416#3 TGCACTGGAAGCGC-TTGTCGCAC-----------TGCTTATCGACAGCACGAAGCTCGC 296
consensus_9416#2 TGCACTGGAAGCGC-TTGTCGCAC-----------TGCTTATCGACAGCACGAAGCTCGC 381
consensus_9416#0 CGTAGTGCCGCCGTGTNGTCAAATAGGGGNAAAGGCGCCTANGGTCCGCCACTAGGCTAT 416
* * ** ** * *** * ** ** * * ** **
consensus_9416#1 CCTCTCGGAGCGTGAGTTCCATA--------------CCGTCGTTCAAGCGGC-GCTGGA 470
consensus_9416#3 CCTCTCGGAGCGTGAGTTCCATA--------------CCGTCGTTCAAGCGGC-GCTGGA 341
consensus_9416#2 CCTCTCGGAGCGTGAGTTCCATA--------------CCGTCGTTCAAGCGGC-GCTGGA 426
consensus_9416#0 CATTCCGGAACANAGGGCACNGAAAAAGATTCGGANCCCATCCTCCGGNNAGCCGGTNGA 476
* * **** * * * * ** ** * * ** * * **
consensus_9416#1 AACGATCAACGAAAAGCA-------ATCCGAAATACTGTGGCAATT-CATAACCAGCAAG 522
consensus_9416#3 AACGATCAACGAAAAGCA-------AACCGAAATACTGTGGCAATT-CATAACCAGCAAG 393
consensus_9416#2 AACGATCAACGAAAAGCA-------AACCGAAATACTGTGGCAATT-CATAACCAGCAAG 478
consensus_9416#0 AGTTTTCACCAATAACCAGGACGGTATCCCAAAGGCNGGNCGGACTGNGGAGACAACAAG 536
* *** * * ** ** * ** *** * * * * * ** ****
consensus_9416#1 CGCACGC------TGGTGGACAATGTGTTGCGCGCC--------TCCTGCCAGG-ATGAG 567
consensus_9416#3 CGCACGC------TGGTGGACAATGTGTTGCGCGCC--------TCCTGCCAGGCATGAG 439
consensus_9416#2 CGCACGC------TGGTGGACAATGTGTTGCGCGCC--------TCCTGCCAGG-ATGAG 523
consensus_9416#0 TATACAAAAACTGCGACAAAAAAAGCAACATAGACCGGCAAAAATTCAGCGTNGGGTGGG 596
** * * ** * ** * * ** * ** *
consensus_9416#1 CTCTACT--TCCGCGATCTGGAGTGGCGCATCG-AGG---GGCGTATC---GCTTCCCGC 618
consensus_9416#3 CTCTACT--TCCGCGATCTGGAGTGGCGCATCGCAGG---GGCGTATC---GCTTCCCGC 491
consensus_9416#2 CTCTACT--TCCGCGATCTGGAGTGGCGCATCG-AGG---GGCGTATC---GCTTCCCGC 574
consensus_9416#0 TGACGACAATTTCCCATTTAAAACCCNATGACAAAGGCCAGGCTNACCTGAGCTTCGTNC 656
* * ** * * * *** *** * * ***** *
consensus_9416#1 -------ACGATACGATCGCAAGCGAC---GCCGGTTATTAA-GATGAAGTTCCATCTCG 667
consensus_9416#3 -------ACGATACGATCGCAAGCGAC---GCCGGTTATTAACGATGAAGTTCCATCTAG 541
consensus_9416#2 -------ACGATACGATCGCAAGCGAC---GCCGGTTATTAA-GATGAAGTTCCATCTAG 623
consensus_9416#0 CGTTGGGACCCCACACTCGGNAGTAGGCCAGCCGGCCCCTNACCCTTTGGCCNCCACATG 716
** ** *** ** ***** * * * * * * *
consensus_9416#1 ACA-CGGAGTGTGTAAGCGAGTACAGGGAAAAATTGCACCCCGAGCCGGTGGATCAGGCG 726
consensus_9416#3 ACAACGGAGTGTGTAAGCGAATACAGGGACAAATTGCACCCCGAGCCGGTGGATCATG-- 599
consensus_9416#2 ACA-CGGAGTGTGTAAGCGAATACAGGGACAAATTGCACCCCGAGCCGGTGGATCATGCG 682
consensus_9416#0 CNNTTCGAG-GCCTACCTACNTTTNAACCCGCGNGGACTCCTTTGCGGACNNCTCAGGGG 775
*** * ** * * ** ** * *** *
consensus_9416#1 CCGGAAGCAGAAGCAACGAAGCAACCGCCCACCCGGAGGGAGGTGTTGGCGGAAACGGAT 786
consensus_9416#3 ------------------------------------------------------------
consensus_9416#2 CCGGAAACAGAGACAACGAAGCAACCGCCCACCCGGANGGANGTGTTGGCGGAAACGGAT 742
consensus_9416#0 CCGGCCGACTGAACCGCACCANAGGGGCGGACCCGTTAACAGTACCNGGCAGCGA-ATAC 834
consensus_9416#1 CCGGCCATGCTGCAAC-------------------------------------------- 802
consensus_9416#3 ------------------------------------------------------------
consensus_9416#2 CCGGCCATGCTGCAAC-------------------------------------------- 758
consensus_9416#0 CACNCCCCGNTACGANACCGAAGTCGAACCGGAACATCAGCACGCACACAAAAGACGGGA 894
consensus_9416#1 ------------------------------------------------------------
consensus_9416#3 ------------------------------------------------------------
consensus_9416#2 ------------------------------------------------------------
consensus_9416#0 ACCAGGNCCGCNTACGCNAANGCGAACACGGCACNCGCAAACACNTTTCACCACCATAGG 954
consensus_9416#1 ------------------------------------------------------------
consensus_9416#3 ------------------------------------------------------------
consensus_9416#2 ------------------------------------------------------------
consensus_9416#0 CCTCCACGGAACACACACCGNGGGAAGCGTGGNTNNGTACAAACGGCCGGAACANCTACA 1014
consensus_9416#1 ------------------------------------------------------------
consensus_9416#3 ------------------------------------------------------------
consensus_9416#2 ------------------------------------------------------------
consensus_9416#0 CACCAGCGGCACGCCAACACAANAATGGCAGCACACCGCACAGAGCCNGCGCTAGGNGAA 1074
consensus_9416#1 ---------
consensus_9416#3 ---------
consensus_9416#2 ---------
consensus_9416#0 CTACCACAG 1083
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||