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Anopheles gambiae
cluster # 9420 cluster # 9420       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9420#0 length = 1435 sequences # 15  
consensus_9420#1 length = 563 sequences # 1  

consensusID : consensus_9420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1435
fasta sequence
                              [GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTCGCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTT-TTCGTTCGTTCGTTCGAAAAG-ATTTTGTTTTTCATTAG-TGTTGTAACCGCTTTGCGTACGATATCAGT-TTTCTT-TGCTCAGCTCAAGCTTCA-TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA-TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT-ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG-AAATCGGTTTGTC-GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGG-TGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAAT----AGTAAAAAAAA]

[+] EMBL BX469125             [GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTCGCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTTGTTCGTTCGTTCGTTCGAAAAGCATTTTGTTTTTCATTAGCTGTTGTAACCGCTTTGCGTACGAT CGAGTGTTTCTTATGCTCAGCTCAAGCTTCAGTTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAAGTCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX603137             [                                                                                    ACACGATATCGGCCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG A  TTGTTTTTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACAT CTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08OSQ             [                                                                                               cCCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTTTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCAAAGTTCTCCGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG A                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08RUP             [                                                                                                tCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTTTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGTGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCAAAAAAAGGAGGACCACGTATTCGATACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM593869             [                                                                                               ccgACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTCTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGAAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX612885             [                                                                                                           TGCACGTCTTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTTTCATTAT TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAGTCAAGCGCGATCAGCTGGTGCGCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM649332             [                                                                                                                                                                        ccgcccacGCGTCCG TATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGAAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM626760             [                                                                                                                                                                                cCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTCCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM643147             [                                                                                                                                                                                        ccgCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGAAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM619956             [                                                                                                                                                                                                           ccGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATACCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCTAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCATCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08OSR             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGGGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGGACTGGCCATGCACGCCGGCTAAACATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCAATTTATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGG TGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAATGGGGAGTAAAAAAAA]
[+] EMBL BX622553             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGCACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACGCGTTGATTGAGCAAGATAANGAAATGGTATAATGTGATTAGCGGAAAATCGGTTTGTCNGGTTGAGATTTtc                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM640560             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGCACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACGCGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTTCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGGCTGCGCGAATG                                                                                                                                                                        ]
[+] EMBL BM653089             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGCACAACGTTACGCGAAATGGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGATCTAAAAATAAGGCTGCGCGAATGCA                                                                                                                                                                      ]
[-] EMBL CNS08RUQ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGGAGCTGCTGATGATGCACGGCGAGTGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGAATTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGG TGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAAT    AGAAAAAA   ]


>consensus_9420#0 GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTC GCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAGATTTTGTTTTTCATTAGTGTTGTAACCGCTTTGCGTACG ATATCAGTTTTCTTTGCTCAGCTCAAGCTTCATTAACCAATCTTAGCGTAATGCGATTGA TAGAGAAGGTGTTTAATCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATG GTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATA TGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGA TGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGG AAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGC TGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCAC TGGCCATGCACGCCGGCTACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGT CATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGC ACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGG GACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATC GTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGA AGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGG TCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTT GAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTG TACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTCGGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGT ACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAG GTGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTC GTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTC GGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAATAGTAAAAAAAA



consensusID : consensus_9420#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 563
fasta sequence
                              [ACATCGGCACGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGAATGGACTGCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTNGTGCGCGAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCGCGGTTTCTCGATATGGCGGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTGTGTTTTGCCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTTTNTTATTNATATNTGGAANANNCAGNTATAAAACAAAGAACAGTTTATTCACACGTTATTACAAAAAATTCTTATTCGCTAGCTTAAAGCT]

[+] EMBL BX469260             [ACATCGGCACGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGAATGGACTGCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTNGTGCGCGAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCGCGGTTTCTCGATATGGCGGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTGTGTTTTGCCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTTTNTTATTNATATNTGGAANANNCAGNTATAAAACAAAGAACAGTTTATTCACACGTTATTACAAAAAATTCTTATTCGCTAGCTTAAAGCT]


>consensus_9420#1 ACATCGGCACGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGA ATGGACTGCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGC TNGTGCGCGAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCGCGGTTTCTCG ATATGGCGGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTG TGTTTTGCCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGT GTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTG GTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGT CAGTTCGTACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTTTNTTATTN ATATNTGGAANANNCAGNTATAAAACAAAGAACAGTTTATTCACACGTTATTACAAAAAA TTCTTATTCGCTAGCTTAAAGCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9420#0      GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTC 60
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      GCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTT 120
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      TTCGTTCGTTCGTTCGAAAAGATTTTGTTTTTCATTAGTGTTGTAACCGCTTTGCGTACG 180
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      ATATCAGTTTTCTTTGCTCAGCTCAAGCTTCATTAACCAATCTTAGCGTAATGCGATTGA 240
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      TAGAGAAGGTGTTTAATCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATG 300
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      GTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATA 360
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      TGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGA 420
consensus_9420#1      ---------------------------------------------------ACATCGGCA 9
                                                                         *** *   *

consensus_9420#0      TGGGGGGCG-AAAACTCGAACGTGTGGTTCAACC-GGAAGCGCATT--GAGATGGACTGC 476
consensus_9420#1      CGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGAATGGACTGC 69
                       * ** *   ************************ ***********     *********

consensus_9420#0      CCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGC 536
consensus_9420#1      C-GGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTNGTGCGC 128
                      * *************************************************** ******

consensus_9420#0      GAGCTGGCTGCCGGCGTGCCGCT--GAACCGGATCGTCGTCGGCGGTTTCTCGATG-GGC 593
consensus_9420#1      GAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCG-CGGTTTCTCGATATGGC 187
                      ***********************   * ************** ************  ***

consensus_9420#0      GGCGCACTGGCCATGCACGCCGGCTACCATCTGAATC-GCGATTTGGGCGGTGTGTTT-G 651
consensus_9420#1      GGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTGTGTTTTG 247
                      *********************** ******** **** ******************** *

consensus_9420#0      CCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGC 711
consensus_9420#1      CCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGTGTTGCGC 307
                      ********************* **************************** *********

consensus_9420#0      AGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGC 771
consensus_9420#1      AGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGC 367
                      ************************************************************

consensus_9420#0      CGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCG 831
consensus_9420#1      CGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCG 427
                      ************************************************************

consensus_9420#0      TACCGCATC-GTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGAC 890
consensus_9420#1      TACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTT-----TNTTATTNA- 481
                      ********* **********************************        ****  * 

consensus_9420#0      TTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGAC 950
consensus_9420#1      TATNTGGAANANNCAGNTATAAAAC-AAAGAACAGTTTATTC-ACACGTTATTACAAAAA 539
                      * * ** *  *      *    ***   ** ***   ***** * **      **   * 

consensus_9420#0      ACAACGAAG-GTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGAT 1009
consensus_9420#1      ATTCTTATTCGCTAGCTTAAAGCT------------------------------------ 563
                      *     *   *  ***  ****                                      

consensus_9420#0      AAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAA 1069
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      TTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAAT 1129
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      GTGATTAGCGGAAATCGGTTTGTCGGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGA 1189
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      GCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGT 1249
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      CTAAAAATAAGGTGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTC 1309
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      TTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTA 1369
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      AGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAATAGTAA 1429
consensus_9420#1      ------------------------------------------------------------
                                                                                  

consensus_9420#0      AAAAAA 1435
consensus_9420#1      ------
                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)