These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9424#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 967 fasta sequence [CCGGACCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATTATTCATCAACCACCGATGCGACGACAGTTTATGATTCAACAACAGAAGATTCCACAACAGAAGAGTTTACCACTGAAGTCGCAGCATCCGAGTCAACGACAGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCCACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAGTTAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGATAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAAGCCGCAACATCCGAGTCAACGACAG] [+] EMBL BM607715 [CCGGACCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCT ] [+] EMBL BM656018 [ CCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATG ] [+] EMBL BM651840 [ CCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATTATTCATCAA ] [+] EMBL BM614771 [ ccGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATTATTCATCAAC ] [+] EMBL BM590749 [ ccgGCTGAACCCAGTGTCAGAGCAGCAGTAGATTGGCTACTAAGCTTCAAGGAATAAGTGAATATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAACAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCGATGCCTCACAGCCAAACAGGCTACGTGACATGTGTTGGAAGGATCAAAATCGCAGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGTACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGTCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTAGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCAAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGCGACGACAACAGTGGATTATGCATCAACCACCGATGCGACGACAGTTTATGATTCAACAACAGAAGATTCCACAACAGA ] [+] EMBL BM651096 [ ccGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAAGGAATAAGTGAATATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGGGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCGATGCCTCACAGCCAAACGGGCTACGTGACATGTGTTGGAAGGATCAAAATCGCAGCCCACTGTCCCGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGTACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGTCCGCAAGTGTTCGATCCGCGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGC ] [+] EMBL BM637648 [ ccgGCTGAACCCAGTGTCAGAGCAGCAGTAGATTGGCTACTAAGCTTCAAGGAATAAGTGAATATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAACAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCGATGCCTCACAGCCAAACAGGCTACGTGACATGTGTTGGAAGGATCAAAATCGCAGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAA ] [+] EMBL BM595118 [ ccgCTAAGCTTCAAGGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAAAAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTCTTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCTTCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAAATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGACAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTGACCACATGTGCAACGGTTTGCCCGCAAGTGTTCGATCCGAGGAAGCTTGTGCTTGTGGAGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGTGCCCGAATGATTTGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTTTATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATT ] [+] EMBL BM589202 [ ccgGTGAAGGTGAAGATCCCGCGACGACAACAGTGGATTATGCATCAACCACCGATGCGACGACAGTTTATGATTCAACAACAAAAGATTCCACAACAGAAGAGTTTACCACTGAAGTCGCAGCATCCGAGTCAACGACAGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCCACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAGTTAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGATAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAAGCCGCAACATCCGAGTCAACGACAG] consensusID : consensus_9424#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGAGTCTACGACGGAGGATTCGATAACAGAGGAGTCCACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCGCTGAAGTCGCAACATCCGAGTCTACTACGGAGGATTCTACAACAGCAGAATCTACCACTGAGGTCGTAACATCCGTGTCAACGACGGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCAACGACAAAAGAATCCACTACAGAAGAATCTTCCACTGAAGTTTCAGTAACTGACTCAACTACAGAAGATTCAACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCTACGACGGAAGATTCTACTACAGAAGAGTCCACCACTGAAGTGACAGTATCCACTGCATCTTCAACATCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATCATTATCAACGATTGAAGTAACACCAGATGAAACGACTTCAAGTTCCTCCACAGAAACAACAACTGCTCTCCCAGTATCTTCAAGTACGGAGAGAACGCCAGTGTCGGGTGCCGAAATTGTTACCGGCATTTCAAAAGCGTTTGAAAAAGTGTCGAG] [+] EMBL BM587996 [CCGCCCACGCGTCCGCCCACGCGTCCGGGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGAGTCTACGACGGAGGATTCGATAACAGAGGAGTCCACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCGCTGAAGTCGCAACATCCGAGTCTACTACGGAGGATTCTACAACAGCAGAATCTACCACTGAGGTCGTAACATCCGTGTCAACGACGGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCAACGACAAAAGAATCCACTACAGAAGAATCTTCCACTGAAGTTTCAGTAACTGACTCAACTACAGAAGATTCAACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCTACGACGGAAGATTCTACTACAGAAGAGTCCACCACTGAAGTGACAGTATCCACTGCATCTTCAACATCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATCATTATCAACGATTGAAGTAACACCAGATGAAACGACTTCAAGTTCCTCCACAGAAACAACAACTGCTCTCCCAGTATCTTCAAGTACGGAGAGAACGCCAGTGTCGGGTGCCGAAATTGTTACCGGCATTTCAAAAGCGTTTGAAAAAGTGTCGAG] consensusID : consensus_9424#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 679 fasta sequence [CCGAAAAGATTCCACAACAGAAGAGTCTACCACTGAAGTCGCAACATCCGAGTCAACGACAGAAGATTCTACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGGCTACCACTGAGGTGATAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCTACGACGGAGGATTCGACAACAGAGGAGTCCACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCGACAACAGAAGAATCTACCACTCAAGTCGCAACATCCGAGTCTACGACGGAGGATTCTACAACAGCAGAATCTACCACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGATTCGACAACAGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGTAACATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCCACGACAGAAGATTCTACA] [+] EMBL BM653847 [CCGAAAAGATTCCACAACAGAAGAGTCTACCACTGAAGTCGCAACATCCGAGTCAACGACAGAAGATTCTACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGGCTACCACTGAGGTGATAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCTACGACGGAGGATTCGACAACAGAGGAGTCCACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCGACAACAGAAGAATCTACCACTCAAGTCGCAACATCCGAGTCTACGACGGAGGATTCTACAACAGCAGAATCTACCACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGATTCGACAACAGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGTAACATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCCACGACAGAAGATTCTACA] consensusID : consensus_9424#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence [CCGGGATTATACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTCGCAACATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGCATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTAT] [+] EMBL BM646441 [CCGGGATTATACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTCGCAACATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGCATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTAT] consensusID : consensus_9424#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 560 fasta sequence [GTCCGCCCACGCGTCCGCACTGAGGTCGCAACATCCGAGTCGACGACCGAAGAGTCCACTACAGAAGAAAAGTCTACCACTGAAGTTACAGTATCCGAGTCTACGACGGAGGATTCTACAACTGAAGAATCTACTACTGTTTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTCACAACAACCATCCGAGTCAACGACGGAGGATTCGACAACAGAAGAGTCTACCACTGAAGTTACAGTATCCGAGTCTACTACGACTGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGCCTACCACTGCAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCTACTACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAAAATCTACCACTGGAAGCCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAAGTTACA] [+] EMBL BM614696 [GTCCGCCCACGCGTCCGCACTGAGGTCGCAACATCCGAGTCGACGACCGAAGAGTCCACTACAGAAGAAAAGTCTACCACTGAAGTTACAGTATCCGAGTCTACGACGGAGGATTCTACAACTGAAGAATCTACTACTGTTTGAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTCACAACAACCATCCGAGTCAACGACGGAGGATTCGACAACAGAAGAGTCTACCACTGAAGTTACAGTATCCGAGTCTACTACGACTGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGCCTACCACTGCAGGTCGCAACATCCGAGTCAACGACAGAAGAGTCTACTACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAAAATCTACCACTGGAAGCCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAAGTTACA] consensusID : consensus_9424#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 552 fasta sequence [CCGGATTCGACGACAGAAGAATCTACCATCTGAAGTCGCATGCATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTAAGGTCGCAACATCCGCGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCTGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAATGCCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGATTCAACGACAGAGAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTATAACTGAAGAATCTACCACTGAAGCCGCAACATCCGAGTCTACGACGGAGGATTCGACCACAGAAGAGGCTACCACTGGAAG] [+] EMBL BM592764 [CCGGATTCGACGACAGAAGAATCTACCATCTGAAGTCGCATGCATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTAAGGTCGCAACATCCGCGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCTGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAATGCCGCAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGATTCAACGACAGAGAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTATAACTGAAGAATCTACCACTGAAGCCGCAACATCCGAGTCTACGACGGAGGATTCGACCACAGAAGAGGCTACCACTGGAAG] consensusID : consensus_9424#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence [CCGAACGACGGAGGATTCTACAACAGAAGAGTCTATCACTGAAGTTACAGTATCCGAGTCCACGACAGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTATCACTGAAGTTACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGAGTCGACGACCGAAGAGTCCACTACAGAAGAGTCTACCACTGAAGTTACAGTATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAG] [+] EMBL BM656467 [CCGAACGACGGAGGATTCTACAACAGAAGAGTCTATCACTGAAGTTACAGTATCCGAGTCCACGACAGAAGATTCTACAACAGAAGAGTCTACCACTGAGGTGACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAAGTCGCAACATCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACGACGGAGGATTCTACAACAGAAGAGTCTATCACTGAAGTTACAGTATCCGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACCACTGAGGTCGCAACATCCGAGTCGACGACCGAAGAGTCCACTACAGAAGAGTCTACCACTGAAGTTACAGTATCCGAGTCTACGACGGAGGATTCTACAACAGAAGAATCTACTACTGAGGTCGCAACATCCGAG] consensusID : consensus_9424#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 444 fasta sequence [ACTGAGGTCGCAACATCCGCTGCATCTTCAACATCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATCATTTATCCAACGGAATTGAAGTAACACCCAGATGAAACGACTTCCAAGTTCCTCCCAACAGGAANAACAAGCTAAACTTGTCTTCTTCNCAGAGTATACTTTCAAAGTTACGGCAGGAAGAAAACAGGCCCCAAGGTTGGTTCCGCGGTTGCCTGAGAATTTGTTTACCTCGGGCATTTTCAAATGAGGCGTTTTGGANACAGATAAGCGTGGTTCCGAAAGGCCAATATTCNTCTGGAAAAGAACAACTTTAGAGGCCCAAACAATTAATTTGCNAATTCTGGGGCCCACTTTTAAGAGGCTAAACTTTAGGAAAATGGTATTAGGGAGAACGATGGNTATCGCGTATTGAAACCTN] [+] EMBL AL932811 [ACTGAGGTCGCAACATCCGCTGCATCTTCAACATCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATCATTTATCCAACGGAATTGAAGTAACACCCAGATGAAACGACTTCCAAGTTCCTCCCAACAGGAANAACAAGCTAAACTTGTCTTCTTCNCAGAGTATACTTTCAAAGTTACGGCAGGAAGAAAACAGGCCCCAAGGTTGGTTCCGCGGTTGCCTGAGAATTTGTTTACCTCGGGCATTTTCAAATGAGGCGTTTTGGANACAGATAAGCGTGGTTCCGAAAGGCCAATATTCNTCTGGAAAAGAACAACTTTAGAGGCCCAAACAATTAATTTGCNAATTCTGGGGCCCACTTTTAAGAGGCTAAACTTTAGGAAAATGGTATTAGGGAGAACGATGGNTATCGCGTATTGAAACCTN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9424#2 ------------------------------------------------------------ consensus_9424#3 ------------------------------------------------------------ consensus_9424#5 ------------------------------------------------------------ consensus_9424#4 ------------------------------------------------------------ consensus_9424#6 ------------------------------------------------------------ consensus_9424#0 CCGGACCGGGCAAGCTGAACCTAGTGTCAGAGCAGCAGTAGATTGGCAACTAAGCTTCAA 60 consensus_9424#1 ------------------------------------------------------------ consensus_9424#7 ------------------------------------------------------------ consensus_9424#2 ------------------------------------------------------------ consensus_9424#3 ------------------------------------------------------------ consensus_9424#5 ------------------------------------------------------------ consensus_9424#4 ------------------------------------------------------------ consensus_9424#6 ------------------------------------------------------------ consensus_9424#0 GGAATAAGTGATTATTGTGTTTGGTTTATATCAGAAATTGTGCTGTAAAAAGTGTGTCAA 120 consensus_9424#1 ------------------------------------------------------------ consensus_9424#7 ------------------------------------------------------------ consensus_9424#2 ------------------------------------------------------------ consensus_9424#3 ------------------------------------------------------------ consensus_9424#5 ------------------------------------------------------------ consensus_9424#4 ------------------------------------------------------------ consensus_9424#6 ------------------------------------------------------------ consensus_9424#0 AAAGTGAAAATGGAGTTTAAACGGACACTTCTGCTTACGATGCTGACAACATCATCTTTC 180 consensus_9424#1 ------------------------------------------------------------ consensus_9424#7 ------------------------------------------------------------ consensus_9424#2 ------------------------------------------------------------ consensus_9424#3 ------------------------------------------------------------ consensus_9424#5 ------------------------------------------------------------ consensus_9424#4 ------------------------------------------------------------ consensus_9424#6 ------------------------------------------------------------ consensus_9424#0 TTCCTGCATGTGTCGGCAAGCTTCATTTGCCCAAAGTATGACACTTCACGACAGTTATCT 240 consensus_9424#1 ------------------------------------------------------------ consensus_9424#7 ------------------------------------------------------------ consensus_9424#2 ------------------------------------------------------------ consensus_9424#3 ------------------------------------------------------------ consensus_9424#5 ------------------------------------------------------------ consensus_9424#4 ------------------------------------------------------------ consensus_9424#6 ------------------------------------------------------------ consensus_9424#0 TCTCTATACGCAATGCCTCACAGCCAAACGGGCTATGTGACATGTGTTGGAAGGATCAAA 300 consensus_9424#1 ------------------------------------------------------------ consensus_9424#7 ------------------------------------------------------------ consensus_9424#2 ------------------------------------------------------------ consensus_9424#3 ------------------------------------------------------------ consensus_9424#5 ------------------------------------------------------------ consensus_9424#4 ------------------------------------------------------------ consensus_9424#6 ------------------------------------------------------------ consensus_9424#0 ATCGCTGCCCACTGTCCGGAGGGATCGGTGTGGAGTGATGCAGTGAAAACATGCGTTCGA 360 consensus_9424#1 ------------------------------------------------------------ consensus_9424#7 ------------------------------------------------------------ consensus_9424#2 --CCGAAAAGATTCCACAACAGAAGAGTCTACCACTGAAGTCGCAACATCCGAGTCAACG 58 consensus_9424#3 -----CCGGGATTATACAACTGAAGAGTCTACCACTGAGGTCGTAACATCCGAGTCAACG 55 consensus_9424#5 ------------------------------------------------------------ consensus_9424#4 ------------------------------------------------------------ consensus_9424#6 ------------------------------------------------------------ consensus_9424#0 CAATACTCCTCCTCGGGAGTTCAGGAGCGAACGAGACGAGATACCGCAATAGAAACAGTG 420 consensus_9424#1 -------------------------------------CCGCCCACGCGTCCGCCCACGCG 23 consensus_9424#7 ------------------------------------------------------------ consensus_9424#2 ACAGAAGATTCTACAACAGAAGAATCTACTA-CTGAGGTCGCA-ACATCCGAGTCAACGA 116 consensus_9424#3 ACGGAGGATTCTACAACAGAAGAGGCTACCA-CTGAAGTCGCA-ACATCCGAGTCTACTA 113 consensus_9424#5 ---CCGGATTCGACGACAGAAGAATCTACCATCTGAAGTCGCATGCATCCGAGTCTACGA 57 consensus_9424#4 -----------GTCCGCCCACGCGTCCGCA--CTGAGGTCGCA-ACATCCGAGTCGACGA 46 consensus_9424#6 ------------------------------------------------CCGA----ACGA 8 consensus_9424#0 ACCACATGTGCAACGGTTTGCCCGCAAGTG--TTCGATCCGAGGAAGCTTGTGCTTGTGG 478 consensus_9424#1 TCCG-GGATTCTACAACTGAAGAATCTACCA-CTGAGGTCGCA-ACATCCGAGTCTACGA 80 consensus_9424#7 ------------------------------------------------------------ consensus_9424#2 CAGAAGAGTCCACTACAGAAGA------GGCTACCACTGAGGTGATAGTATCCGAGTCCA 170 consensus_9424#3 CGGAGGATTCTACAACTGAAGA------ATCTACCACTGAAGTCGCAACATCCGAGTCAA 167 consensus_9424#5 CGGAGGATTCTACAACAGAAGA------GGCTACCACTGAAGTTACAGTATCCGAGTCTA 111 consensus_9424#4 CCGAAGAGTCCACTACAGAAGAAAA---GTCTACCACTGAAGTTACAGTATCCGAGTCTA 103 consensus_9424#6 CGGAGGATTCTACAACAGAAGA------GTCTATCACTGAAGTTACAGTATCCGAGTCCA 62 consensus_9424#0 AGCATAGTTCTTGTACGAAATATAATCTGTGCGTTCTTGGGCTGATGCTGACTGTATCGT 538 consensus_9424#1 CGGAGGATTCGATAACAGAGGA------GTCCACCACTGAGGTGACAGTATCCGAGTCCA 134 consensus_9424#7 -----------------------------------ACTGAGGTCGCAACATCCGCTGCAT 25 ** * * * * consensus_9424#2 CGACAGAAGATTCTACAACTGAAGAATCTACCAC-TG----AAGTCGCAACATCCGAGTC 225 consensus_9424#3 CGACGGAGGATTCTACAACAGAAGAGGCTACCAC-TG----AGGTCGTAACATCCGAGTC 222 consensus_9424#5 CTACGGAGGATTCTACAACTGAAGAATCTACCAC-TA----AGGTCGCAACATCCGCGTC 166 consensus_9424#4 CGACGGAGGATTCTACAACTGAAGAATCTACTAC-TGTTTGAGGTCGCAACATCCGAGTC 162 consensus_9424#6 CGACAGAAGATTCTACAACAGAAGAGTCTACCAC-TG----AGGTGACAGTATCCGAGTC 117 consensus_9424#0 GCCCGAATGATT-TGCGGTTCAATAAGGAGCGGTGTGAATGTGATTTCAAGGAAAAGGTT 597 consensus_9424#1 CGACAGAAGATTCTACAACTGAAGAATCTACCGC-TG----AAGTCGCAACATCCGAGTC 189 consensus_9424#7 C---------TTCAACATCTGAAGTGCCTACATC-CG----AATCAACAACGGAAGCGTC 71 ** * ** * * ** consensus_9424#2 TACGACG-----GAGGATTCG------ACAACAGAGGA------GTCCACCACTGAGGTG 268 consensus_9424#3 AACGACG-----GAGGATTCT------ACAACAGAAGA------GGCTACCACTGAAGTT 265 consensus_9424#5 AACGACA-----GAAGAGTCC------ACTACAGAAGA------GTCTACCACTGAGGTG 209 consensus_9424#4 AACGACA-----GAAGAGTCC------ACTACAGAAGA------GTCTACCACTGAGGTC 205 consensus_9424#6 CACGACA-----GAAGATTCT------ACAACTGAAGA------ATCTACCACTGAAGTC 160 consensus_9424#0 TATTGTGAAGGTGAAGATCCCGTGACGACAACAGTGGATTATTCATCAACCACCGATGCG 657 consensus_9424#1 TACTACG-----GAGGATTCT------ACAACAGCAGA------ATCTACCACTGAGGTC 232 consensus_9424#7 AACTCAA------TCGATATCATTTATCCAACGGAATTG-----AAGTAACACCCAGATG 120 * ** * ** * * *** * consensus_9424#2 ACAGTA----TCCGAGTCCACGACAGAAGATTCGACAACAGAAGAATCTACCACTCAA-G 323 consensus_9424#3 ACAGTA----TCCGAGTCTACTACGGAGGATTCTACAACTGAAGAATCTACCACTGAA-G 320 consensus_9424#5 ACAGTA----TCTGAGTCCACGACAGAAGATTCTACAACTGAAGAATCTACTACTGAATG 265 consensus_9424#4 ACAACAACCATCCGAGTCAACGACGGAGGATTCGACAACAGAAGAGTCTACCACTGAA-G 264 consensus_9424#6 GCAACA----TCCGAGTCAACGACGGAGGATTCTACAACTGAAGAGTCTACCACTGAG-G 215 consensus_9424#0 ACGACAGTT-TATGATTCAACAACAGAAGATTCCACAACAGAAGAGTTTACCACTGAA-G 715 consensus_9424#1 GTAACA----TCCGTGTCAACGACGGAAGATTCTACAACAGAAGAGTCTACCACTGAG-G 287 consensus_9424#7 AAACGACT--TCCAAGTTCCTCCCAACAGGAANAACAAGCTAAACTTGTCTTCTTCNCAG 178 * * * * * **** ** * * * * consensus_9424#2 TCGCAACATCCGAGTCTACGACG----GAGGATTCTACAACAGCAGAATC-TACCACTGA 378 consensus_9424#3 TCGCAACATCCGAGTCAACGACG----GAGGATTCTACAACTGAAGAGTC-TACCACTGA 375 consensus_9424#5 CCGCAACATCCGAGTCAACGACG----GAGGATTCTACAACAGAAGAGGC-TACCACTGA 320 consensus_9424#4 TTACAGTATCCGAGTCTACTACGACTGGAGGATTCTACAACTGAAGAGTC-TACCACTGA 323 consensus_9424#6 TCGTAACATCCGAGTCAACGACG----GAGGATTCTACAACAGAAGAGTC-TATCACTGA 270 consensus_9424#0 TCGCAGCATCCGAGTCAACGACA----GAAGATTCTACAACAGAAGAGTC-TACCACTGA 770 consensus_9424#1 TCGCAACATCCGAGTCAACGACA----AAAGAATCCACTACAGAAGAATC-TTCCACTGA 342 consensus_9424#7 AGTATACTTTCAAAGTTACGGCA---GGAAGAAAACAGGCCCCAAGGTTGGTTCCGCGGT 235 * * * ** * * ** * * ** * * * * consensus_9424#2 GGTCGCAACATCCGAGTCAACGACAGAAGAGTCCACTACAGAAGAGTCTACCACTGAGGT 438 consensus_9424#3 GGTCGTAACATCCGAGTCAACGACGGAGCA------------------------------ 405 consensus_9424#5 AGTTACAGTATCCGAGTCTACTACGGAGGA------------------------------ 350 consensus_9424#4 GGTCGTAACATCCGAGTCAACGACGGAGGA------------------------------ 353 consensus_9424#6 AGTTACAGTATCCGAGTCCACGACAGAAGA------------------------------ 300 consensus_9424#0 GGTGACAGTATCCGAGTCCACGACAGAAGA------------------------------ 800 consensus_9424#1 AGTTTCAGTAACTGACTCAACTACAGAAGA------------------------------ 372 consensus_9424#7 TGCCTGAGAATTTG--TTTACCTCGGGCATTTTCA---------------------AATG 272 * * * * * ** * * consensus_9424#2 GACAGATTCGACAACAGAAGAATCTACCACTG-AAGTCGCAACATCCGAGTCTACGACGG 497 consensus_9424#3 ------TTCTACAACAGAAGAGTCTACCACTG-AGGTCGCAACATCCGAGTCAACGACAG 458 consensus_9424#5 ------TTCTACAACTGAAGAATCTACCACTG-AGGTCGCAACATCCGATTCAACGACAG 403 consensus_9424#4 ------TTCTACAACAGAAGAGCCTACCACTGCAGGTCGCAACATCCGAGTCAACGACAG 407 consensus_9424#6 ------TTCTACAACTGAAGAATCTACCACTG-AGGTCGCAACATCCGAGTCGACGACCG 353 consensus_9424#0 ------TTCCACAACAGAAGAATCTACTACTG-AGGTCGCAACATCCGAGTTAACGACAG 853 consensus_9424#1 ------TTCAACAACAGAAGAGTCTACCACTG-AGGTCGCAACATCCGAGTCTACGACGG 425 consensus_9424#7 AGGCGTTTTGGANACAGATAAGCGTGGTTCCGAAAGGC-CAATATTCN--TCTGGAAAAG 329 ** ** ** * * * * * * * *** ** * * * * consensus_9424#2 AG-GATTCTACAACAGAAGAGGCTACCACTGAAGTTACAGTATCC---GAGTCTACTACG 553 consensus_9424#3 AA-GAGTCCACTACAGAAGAATCTACCACTGAAGTCGCAACATCC---GAGTCAACGACG 514 consensus_9424#5 AGAGAGTCCACTACAGAAGAGTCTACCACTGAGGTGACAGTATCC---GAGTCCACGACA 460 consensus_9424#4 AA-GAGTCTACTACAGAAGAGTCTACCACTGAGGTGACAGTATCC---GAGTCCACGACA 463 consensus_9424#6 AA-GAGTCCACTACAGAAGAGTCTACCACTGAAGTTACAGTATCC---GAGTCTACGACG 409 consensus_9424#0 AA-GAGTCCACTACAGAAGAGTCTACCACTGAGGTGATAGTATCC---GAGTCCACGACA 909 consensus_9424#1 AA-GATTCTACTACAGAAGAGTCCACCACTGAAGTGACAGTATCCACTGCATCTTCAACA 484 consensus_9424#7 AA-----CAACTTTAGAGGCCCAAACAATTAATTTGCNAATTCTG---GGGCCCACTTTT 381 * * ** *** * ** * * * * * * * * consensus_9424#2 ---GAGGATTCTACAACTGAAGAATCTACCACTG----AGGTCG--TAACATC-CGAGTC 603 consensus_9424#3 ---GAGGATTCTACAACTGAAGAATCTACCACTG----AGGTCG--TAACATC-CGAGTC 564 consensus_9424#5 ---GAAGATTCTATAACTGAAGAATCTACCACTG----AAGCCG--CAACATC-CGAGTC 510 consensus_9424#4 ---GAAGATTCTACAACTGAAAAATCTACCACTGG---AAGCCG--CAACATC-CGAGTC 514 consensus_9424#6 ---GAGGATTCTACAACAGAAGAATCTACTACTG----AGGTCG--CAACATC-CGAG-- 457 consensus_9424#0 ---GAAGATTCTACAACTGAAGAATCTACTACTG----AAGCCG--CAACATC-CGAGTC 959 consensus_9424#1 TCTGAAGTGCCTACATCCGAATCAACAACGGAAGCGTCAACTCAATCGATATC-ATTATC 543 consensus_9424#7 ----AAGAGGCTAAACTTTAGGAAAATGGTATTAGGG-AGAACGATGGNTATCGCGTATT 436 * * *** * * * * * *** consensus_9424#2 TACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAGGTCGCAACATCCGAGTCCAC 663 consensus_9424#3 AACGACGGAGGATTCTACAACAGAAGAGTCTAT--------------------------- 597 consensus_9424#5 TACGACGGAGGATTCGACCACAGAAGAGGCTACCACTGGAAG------------------ 552 consensus_9424#4 AACGACGGAGGATTCTACAACAGAAGAGTCTACCACTGAAGTTACA-------------- 560 consensus_9424#6 ------------------------------------------------------------ consensus_9424#0 AACGACAG---------------------------------------------------- 967 consensus_9424#1 AACGATTGAAGTAACACCAGATGAAACGACTTCAAGTTCCTCCACAGAAACAACAACTGC 603 consensus_9424#7 GAAACCTN---------------------------------------------------- 444 consensus_9424#2 GACAGAAGATTCTACA-------------------------------------------- 679 consensus_9424#3 ------------------------------------------------------------ consensus_9424#5 ------------------------------------------------------------ consensus_9424#4 ------------------------------------------------------------ consensus_9424#6 ------------------------------------------------------------ consensus_9424#0 ------------------------------------------------------------ consensus_9424#1 TCTCCCAGTATCTTCAAGTACGGAGAGAACGCCAGTGTCGGGTGCCGAAATTGTTACCGG 663 consensus_9424#7 ------------------------------------------------------------ consensus_9424#2 ------------------------------ consensus_9424#3 ------------------------------ consensus_9424#5 ------------------------------ consensus_9424#4 ------------------------------ consensus_9424#6 ------------------------------ consensus_9424#0 ------------------------------ consensus_9424#1 CATTTCAAAAGCGTTTGAAAAAGTGTCGAG 693 consensus_9424#7 ------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||