These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9429#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1192 fasta sequence [CCGGTCGTTTTCGGTCGTAGCGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT-GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAA-AAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATTCACCCAGCGACACACATAGCCCCAGATATACTTACACNAACCTATCCTATCCTATACTATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGNTTTATTCCCGTCGTTGATTTAATTNCGATGAAATGATAACATATTTGCATCAGATGCCACTATTAAAAG] [+] EMBL BM656584 [CCGGTCGTTTTCGGTCGTAGCGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACG ] [+] EMBL BX623194 [ GCGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCT ] [+] EMBL BM599147 [ ccgGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACATGGGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACT ] [+] EMBL BX628041 [ CCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAA AAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCAC ANTTTACCATTTTTACCTATTCA CCAGCGACAC ] [+] EMBL BX627124 [ CCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAA AAAGAACACACACCAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACNAA ] [+] EMBL BM631941 [ ccgCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGACATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAAGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCCTGCTAGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTGCAGTCCGTCGTGTACTGGGTAAAAACACACAAACTAAGAACACACACAAAAAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCA ] [+] EMBL BX622305 [ TTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGATTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAA AAAGAACACACACAAAGAAACGATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATTCACCCAGCGACACACATAGCCCCAGATATACTTACACNAACCTATCCTATCCTATACTATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGNTTTATTCCCGTCGTTGATTTAATTNCGATGAAATGATAACATATTTGCATCAGATGCCACTATTAAAAG] [+] EMBL BM581422 [ ccGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCCTGCTAGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTGCAGTCCGTCGTGTACTGGGTAAAAACACACAAACTAAGAACACACACAAAAAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTACGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATACACCCAGCGACACACATAGCCCCAGATATACTTACACAAACCTATCCTATCCTATACAATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGTTTTATT CCGTCGTTGATTTAAT ] consensusID : consensus_9429#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence [CCGCCCACGCGTCCGGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAAAAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATTCACCCAGCGACACACATAGCCCCAGATATACTTACACAAACCTATCCTATCCTATACAATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGTTTTATTCCGTCGTTGATTTAATTCCGATGAAAATGATAACATATTTGCAGCAGATGCAACTATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT] [+] EMBL BM576740 [CCGCCCACGCGTCCGGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAAAAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATTCACCCAGCGACACACATAGCCCCAGATATACTTACACAAACCTATCCTATCCTATACAATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGTTTTATTCCGTCGTTGATTTAATTCCGATGAAAATGATAACATATTTGCAGCAGATGCAACTATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT] consensusID : consensus_9429#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 626 fasta sequence [CCCACGCGTCCGGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCTGTGTTTTGGCGAATTTGTGGCCCCGATTTGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCCCCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAGAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGACATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAAGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACATGGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGA] [+] EMBL BM620113 [CCCACGCGTCCGGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCTGTGTTTTGGCGAATTTGTGGCCCCGATTTGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCCCCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAGAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGACATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAAGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACATGGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGA] [+] EMBL BM595283 [ ccgATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCTGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCCCCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAGAAACTGGATCTCGACAATTCGGGCGCCCTCA ] consensusID : consensus_9429#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 624 fasta sequence [CCGCGGACGCGTGGGAAAATGATAACATATTTGCAGCAGATGCAACTATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAATGGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAATCTATCGTTCATCAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGAGAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGTCTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTTAGCATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGTATTATATAGACCAATGTAGTTAAGTAATAATATTAATAAAAAAGTGCGATCTGCCGAAGATGGATTAACTGGTGAATTAACTCTGGCAGAAAGTGGCAGCAGAAAAGGAATGAATGGGGAATGAATAAACACATTTAATCTCAAATCCACCGCCCATAGCCAATGGAAAATTGCAATTGTTTCGCCGTCTCCAACTGCATGTCCAGGATACCTTACCCTTTCCTTTGGTTCTATCGTCAATGGTATAGT] [+] EMBL BM648523 [CCGCGGACGCGTGGGAAAATGATAACATATTTGCAGCAGATGCAACTATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAATGGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAATCTATCGTTCATCAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGAGAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGTCTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTTAGCATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGTATTATATAGACCAATGTAGTTAAGTAATAATATTAATAAAAAAGTGCGATCTGCCGAAGATGGATTAACTGGTGAATTAACTCTGGCAGAAAGTGGCAGCAGAAAAGGAATGAATGGGGAATGAATAAACACATTTAATCTCAAATCCACCGCCCATAGCCAATGGAAAATTGCAATTGTTTCGCCGTCTCCAACTGCATGTCCAGGATACCTTACCCTTTCCTTTGGTTCTATCGTCAATGGTATAGT] consensusID : consensus_9429#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 560 fasta sequence [GCAGAATCGGCACGATGGAGCAGATGCAACTATTAAAAACGAAAGGTAAATAGTAACGGTGCGCGTGCAATAATGGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAATCTATCGTTCATCAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGAGAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGTCTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTTAGCATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGTATTATATAGACCAATGTAGTTAGTAATAATATTAATAAAAAAGTGCGATCTGCCGAAGATGGATTAACTGGTGAATTAACTCTGGCAGACAAGTGGCCAGCAGAAAAGGAATGAATGGGGAATGAATAAACACATTTAATCTCAAATCCACCGGGCCATAGNCAATGGAAANATGCAATTGTTTACGCCGTCTCCCAACT] [+] EMBL BX469839 [GCAGAATCGGCACGATGGAGCAGATGCAACTATTAAAAACGAAAGGTAAATAGTAACGGTGCGCGTGCAATAATGGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAATCTATCGTTCATCAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGAGAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGTCTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTTAGCATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGTATTATATAGACCAATGTAGTTAGTAATAATATTAATAAAAAAGTGCGATCTGCCGAAGATGGATTAACTGGTGAATTAACTCTGGCAGACAAGTGGCCAGCAGAAAAGGAATGAATGGGGAATGAATAAACACATTTAATCTCAAATCCACCGGGCCATAGNCAATGGAAANATGCAATTGTTTACGCCGTCTCCCAACT] consensusID : consensus_9429#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 486 fasta sequence [TTTTTTTTAAANTCATCTTCGGCAGATCGCACTTTTTTTTATTAATATTATTACTTAACTACATTGGTCTATATAATACGTAAGTGTAATCGATTGAAACAAAACAAACTCATATAACGTATAATGCTAAGCATAATTAATCGTCTCTTGCTGTTTTAAAAACGTTGATAACGAAGTTTCACAGACTAACCGCACAAGGAGACAATTGTAACAATATGTAAATAGGTAAAACATGAATTGCCTCTCTCTTAAACATTTACGACACACACAATATTGTTTTTAAGGACATATTGATGAACGATAGATTAATTGAAATTGAAAGATAAACACTGGATAGTACCATCACAAACCATTATTGCACGCGCACCGTTACTATTTACCTTTCTTTTTAATAGTTGCATCTGATGCAAATATGTTATCATTTTCATCGGAATTAAATCAACGACGGAATAAAACAGATGATGCGAGAGCGTTTTAACTCGTGGG] [+] EMBL AGA280177 [TTTTTTTTAAANTCATCTTCGGCAGATCGCACTTTTTTTTATTAATATTATTACTTAACTACATTGGTCTATATAATACGTAAGTGTAATCGATTGAAACAAAACAAACTCATATAACGTATAATGCTAAGCATAATTAATCGTCTCTTGCTGTTTTAAAAACGTTGATAACGAAGTTTCACAGACTAACCGCACAAGGAGACAATTGTAACAATATGTAAATAGGTAAAACATGAATTGCCTCTCTC ] [-] EMBL AL692182 [ TATTACTTAACTACATTGGTCTATATAATACGTAAGTGTAATCGATTGAAAC AAAC AACTCATATAACGTATAATGCTAAGCATAATTAATCGTCTCTTGCTGTTTTAAAAACGTTGATAACGAAGTTTCACAGACTAACCACACAAGGAGACAATTGTAACAATATGTAAATAGGTAAAACATGAATTGCCTCTCTCTTAAACATTTACGACACACACAATATTGTTTTTAAGGACATATTGATGAACGATAGATTAATTGAAATTGAAAGATAAACACTGGATAGTACCATCACAAACCATTATTGCACGCGCACCGTTACTATTTACCTTTCTTTTTAATAGTTGCATCTGATGCAAATATGTTATCATTTTCATCGGAATTAAATCAACGACGGAATAAAACAGATGATGCGAGAGCGTTTTAACTCGTGGG] consensusID : consensus_9429#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 187 fasta sequence [GNAATCGCGCTCGCTCATGATATTCTGCAGAGCTGGCAAACCCGCTGGTGCAGCCGTGTGATCCGACATTTTCGACGCGGACGGCAATGGGGAGGTCCGATTTCAAGGAGTTTATCCAGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTTCCGAATATATGA] [+] EMBL AL932427 [GNAATCGCGCTCGCTCATGATATTCTGCAGAGCTGGCAAACCCGCTGGTGCAGCCGTGTGATCCGACATTTTCGACGCGGACGGCAATGGGGAGGTCCGATTTCAAGGAGTTTATCCAGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTTCCGAATATATGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9429#0 CCGGTCGTTTTCGGTCGTAGCGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAAT 60 consensus_9429#1 ------------------------------------------------------------ consensus_9429#2 ------------------------------------------------------------ consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------------------------------------ consensus_9429#4 ------------------------------------------------------------ consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 TACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCT 120 consensus_9429#1 ------------------------------------------------------------ consensus_9429#2 ------------------------------------------------------------ consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------------------------------------ consensus_9429#4 ------------------------------------------------------------ consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 GTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCA 180 consensus_9429#1 ------------------------------------------------------------ consensus_9429#2 ------------------------------------------------------------ consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------------------------------------ consensus_9429#4 ------------------------------------------------------------ consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 ACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGA 240 consensus_9429#1 ------------------------------------------------------------ consensus_9429#2 ------------------------------------------------------------ consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------------------------------------ consensus_9429#4 ------------------------------------------------------------ consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 AACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGG 300 consensus_9429#1 ------------------------------------------------------------ consensus_9429#2 ------------------------------------------------------------ consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------------------------------------ consensus_9429#4 ------------------------------------------------------------ consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 CAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTAT 360 consensus_9429#1 ------------------------------------------------------------ consensus_9429#2 ------------------------------------------------------------ consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------------------------------------ consensus_9429#4 ------------------------------------------------------------ consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 GTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGC 420 consensus_9429#1 ------------------------------------------------------------ consensus_9429#2 ------------------------------------------------------------ consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------------------------------------ consensus_9429#4 ------------------------------------------------------------ consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 GGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGT 480 consensus_9429#1 ------------------------------------------------------------ consensus_9429#2 ------------------------------------------------------------ consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------------------------------------ consensus_9429#4 ------------------------------------------------------------ consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 AAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACATGGATAACGA 540 consensus_9429#1 ------------------------------------------------------------ consensus_9429#2 ------------------------------------------------------------ consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------------------------------------ consensus_9429#4 ------------------------------------------------------------ consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 TGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGG--TCGGTAACAAT 598 consensus_9429#1 ------------------------------CCGCCCACGCGTCCGGG--TCGGTAACAAT 28 consensus_9429#2 ---------------------------------CCCACGCGTCCGGAATCTTCTTCTAAG 27 consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 ------------------------------CCGCGGACGCGTGGGAAAATGATAACATAT 30 consensus_9429#4 -------------------------------------------GCAGAATCGGCACGA-- 15 consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 CTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGAC 658 consensus_9429#1 CTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGAC 88 consensus_9429#2 CTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCTGTGTTTTGGCGAA 87 consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 TTGCAGCAGATGCAACTATTAAAAA-GAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT 89 consensus_9429#4 -TGGAGCAGATGCAACTATTAAAAACGAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT 74 consensus_9429#5 ------------------------------------------------------------ consensus_9429#0 GAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCAT 718 consensus_9429#1 GAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCAT 148 consensus_9429#2 TTTGTGGCCCCGATTTGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCAT 147 consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 GGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAA-TCTATCGTTCAT 148 consensus_9429#4 GGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAA-TCTATCGTTCAT 133 consensus_9429#5 ------------------TTTTTTTTAAANTCATCTTCGGCAGATCGCACTTTTTTTTAT 42 consensus_9429#0 AAAAAGATGGTC--GTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGC 776 consensus_9429#1 AAAAAGATGGTC--GTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGC 206 consensus_9429#2 AGTTAGGAGCCCCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGC 207 consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 CAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGA 208 consensus_9429#4 CAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGA 193 consensus_9429#5 TAATATTATTACTTAACTACATTGGTCTATATAAT-ACGTAAGTGTAATCGATTGAAACA 101 consensus_9429#0 CAAG-GGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGG 835 consensus_9429#1 CAAG-GGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGG 265 consensus_9429#2 AACA-GATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTG 266 consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 GAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGT 268 consensus_9429#4 GAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGT 253 consensus_9429#5 AAACAAACTCATATAACGTATAATGCTAAGCATAATTAATCGTCTCTTGCTGTTTTAAAA 161 consensus_9429#0 TAAAAACACACAAAAAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTT-CAT 894 consensus_9429#1 TAAAAACACACAAAAAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTT-CAT 324 consensus_9429#2 -----ACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAGAAACTGGATCTCGACAA 321 consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 CTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTT-AGC 327 consensus_9429#4 CTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTT-AGC 312 consensus_9429#5 ACGT-TGATAACGAAGTTTCACAGACTAACCGCACAAGGAGACAATTGTAACAATATGTA 220 consensus_9429#0 TTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACG 954 consensus_9429#1 TTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACG 384 consensus_9429#2 TTCGGGCGCCCTCAGCATCGAT--GAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCG 379 consensus_9429#6 -------GNAATCGCGCTCGCT--CATGATAT---TCTGC-AGAGCTG--GCAAA-CCCG 44 consensus_9429#3 ATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGT--ATTATATAGA 385 consensus_9429#4 ATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGT--ATTATATAGA 370 consensus_9429#5 AATAGGTAAAACATGAATTGCCTCTCTCTTAAACATTTACGACACACACAATATTGTTTT 280 * * * consensus_9429#0 ATGGTGAAAACAGTGTGG---GATGATT-ACGA-ATGGGTAGTTTTGTCACAATTTT-AC 1008 consensus_9429#1 ATGGTGAAAACAGTGTGG---GATGATT-ACGA-ATGGGTAGTTTTGTCACAATTTT-AC 438 consensus_9429#2 CTGGTGCAG-C-GTGTGATC-GACATTT-TCGACGCGGACGGCAATGGGGAGGTC----- 430 consensus_9429#6 CTGGTGCAG-CCGTGTGATCCGACATTT-TCGACGCGGACGGCAATGGGGAGGTCC---- 98 consensus_9429#3 CCAATGTAG-TTAAGTAAT--AATATTA-ATAAAAAAGTGCGATCTGCCGAAGATGG-AT 440 consensus_9429#4 CCAATGTAG-TTA-GTAAT--AATATTA-ATAAAAAAGTGCGATCTGCCGAAGATGG-AT 424 consensus_9429#5 TAAGGACATATTGATGAACGATAGATTAATTGAAATTGAAAGATAAACACTGGATAGTAC 340 * * * * * * consensus_9429#0 CATTTTTACCTATT--CACCCAGCGACACACATAGCCCCAGATATACTTACACNAACCTA 1066 consensus_9429#1 CATTTTTACCTATT--CACCCAGCGACACACATAGCCCCAGATATACTTACACAAACCTA 496 consensus_9429#2 GATTTCAAGGAGTT--TATCCAGGGCGTGTCGCAGTTTAGCGTAAAAGGCGACAAAC-TG 487 consensus_9429#6 GATTTCAAGGAGTT--TATCCAGG-CGTGTCGCAGTTTAGCGTAAAGGGCGACAAAC-TG 154 consensus_9429#3 TAACT-GGTGAATT--AACTCTGGCAGA-AAGTGGC--AGCAGAAAAGGAATGAATGGGG 494 consensus_9429#4 TAACT-GGTGAATT--AACTCTGGCAGACAAGTGGCC-AGCAGAAAAGGAATGAATGGGG 480 consensus_9429#5 CATCACAAACCATTATTGCACGCGCACCGTTACTATTTACCTTTCTTTTTAATAGTTGCA 400 * ** * consensus_9429#0 TCCTA-TCCTATACTATCGCTTACGTGT-CATATTTGGAAACGCTCTCGCATCATCTGNT 1124 consensus_9429#1 TCCTA-TCCTATACAATCGCTTACGTGT-CATATTTGGAAACGCTCTCGCATCATCTGTT 554 consensus_9429#2 TCCAA-GCTGAAATTTGCCTT-CCGAATATATGACATGGATAACGATGGATACATCTCGA 545 consensus_9429#6 TCCAA-GCTGAAATTTGCCTTTCCGAATATATGA-------------------------- 187 consensus_9429#3 AATGA-ATAAACACATTTAATCTCAAATCCACCGC-CCATAGCCAATGGAAAATTGCA-A 551 consensus_9429#4 AATGA-ATAAACACATTTAATCTCAAATCCACCGGGCCATAGNCAATGGAAANATGCA-A 538 consensus_9429#5 TCTGATGCAAATATGTTATCATTTTCAT-CGGAATTAAATCAACGACGGAATAAAACAGA 459 * * * * consensus_9429#0 TTATTCCCGTCGTTGATTTAATTNCGATGAAA-TGATAACATATTTGCATCAGATGCCAC 1183 consensus_9429#1 TTATTCC-GTCGTTGATTTAATTCCGATGAAAATGATAACATATTTGCAGCAGATGCAAC 613 consensus_9429#2 ATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAAC 605 consensus_9429#6 ------------------------------------------------------------ consensus_9429#3 TTGTTT-CGCCGTCTCC-AACTGCATGTCCAGGATACCTTACCCTTTCCTTTGGTTCTAT 609 consensus_9429#4 TTGTTTACGCCGTCTCCCAACT-------------------------------------- 560 consensus_9429#5 TGATGCGAGAGCGTTTTAACTCGTGGG--------------------------------- 486 consensus_9429#0 TATTAAAAG---------------------------------- 1192 consensus_9429#1 TATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT 656 consensus_9429#2 TGCAGCAGATCGTAGACAAGA---------------------- 626 consensus_9429#6 ------------------------------------------- consensus_9429#3 CGTCAATGGTATAGT---------------------------- 624 consensus_9429#4 ------------------------------------------- consensus_9429#5 ------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||