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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9437#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 877 fasta sequence
[GCAGATCCCCCGAGGTTAGTCTGGATAAACTGTTTTGCCTAAAATTTCGTTCGCATCATTGAGCGTGGAATGCTTTAAATTTCGTGTAAAAGAGCTCGCTAAAACTCGTGCGATTAGTGCTCTTTATTTTGTAAAGGTTAGGAAGTGTTCTGCTG-GGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACG-TTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAA-GTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCACATGCGGCACCTCGACTTGGACGAGCCAAAGAGCTCGAAGGACTACCGGGAGATAGTAGTGCCGGGGTAATGTTTTAAAGCAATTGAATAGCATTATTAACCCAACCCTGTTGAGTGAGTATGCGTACGTGCTGCGTCCAGGAGGCAAAATTTATACTGTAACCGACGTGCGAGAGCTGCACGAATGGATGTGTAAGCATATCGAAGAGCATCCATGCTTC]
[+] EMBL AL932990 [GCAGATCCCCCGAGGTTAGTCTGGATAAACTGTTTTGCCTAAAATTTCGTTCGCATCATTGAGCGTGGAATGCTTTAAATTTCGTGTAAAAGAGCTCGCTAAAACTCGTGCGATTAGTGCTCTTTATTTTGTAAAGGTTAGGAAGTGTTCTGCTG GGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACGCTTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAACGTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCAC ]
[+] EMBL BX624169 [ GGATAAACTGTTTTGCCTAAAATTTCGTTCGCATCATTGAGCGTGGAATGCTTTAAATTTCGTGTAAAAGAGCTCGCTAAAACTCGTGCGATTAGTGCTCTTTATTTTGTAAAGGTTAGGAAGTGTTCTGCTG GGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACG TTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAA GTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCACATGCGGCACCTCGACTTGGACGAGCCAAAGAGCTCGAAGGACTACCGGGA ]
[+] EMBL BX609179 [ TAAAACTCGTGCGATTAGTGCTCTTTATTTTGTAAA GAA CAGCTGAGGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACG TTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAA GTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCACATGCGGCACCTCGACTTGGACGAGCCAAAGAGCTCGAAGGACTACGGGGAGATAGTAGTGCCGGGGTAATGTTTTAAAGCAATTGAATAGCATTATTAACCCAACCCTGTTGAGTGAGTATGCGTACGTGCTGCGTCCAGGAGGCAAAATTTATACTGTAACCGACGTGCGAGAGCTGCACGAATGGATGTGTAAGCATATCGAAGAGCATCCATGCTTC]
consensusID : consensus_9437#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 795 fasta sequence
[CCG-GCCAGGAACACGCGATACCGGCATTGCATACACATTGCGAAAGTTTCAATTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCA-AATAATTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGAGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAAGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAACTACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCTGTATCCGGATCCGCACTTCAAAAAGGCGAAACACAAGTGGCGCATTATTAACCCAACCCTGTTGAGTGAGTATGCGTACGTGCTGCGTCCAGGAGGCAAAATTTATACTGTAACCGACGTGCGAGAGCTGCACGAATGGATGTGTAAGCATATCGAAGAGCATCCATGCTTCAAGCGTTTGCCAGACACTGAAGCTCAGGAGGACATTCTCGCCCCAAAGCTGCTGGATAGCAGCGAAGAA]
[+] EMBL BM633924 [CCG GCCAGGAACACGCGATACCGGCATTGCATACACATTGCGAAAGTTTCAATTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCA AATAATTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGAGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAAGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAACTACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCTGTATCCGGATCCGCACTTCAAAAAGGCGAAACACAAGTGGCGCATTATTAACCCAACCCTGTTGAGTGAGTATGCGTACGTGCTGCGTCCAGGAGGCAAAATTTATACTGTAACCGACGTGCGAGAGCTGCACGAATGGA ]
[+] EMBL BM598201 [CCGAGCCAGGAACACGCGATACCGGCATTGCATACACATTGCGAAAGTTTCAATTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCA AATAATTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGAGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAAGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAACTACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCTGTATCCGGATCCGCACTTCAAAAAGGCGAAACACAAGTGGCGCATTATTAACCCAACCCTGTTGAGTGAGTATGCGTACGTGC ]
[+] EMBL BM587536 [CCG GCCAGGAACACGCGATACCGGCATTGCATACACATTGCGAAAGTTTCAATTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCA AATAATTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGAGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAAGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAACTACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCTGTATCCGGATCCGCACTTCAAAAAGGCGAAACACAAGTGGCGCATTATT ]
[+] EMBL CNS09ED5 [ CCACGCACACGCGATACCGGCATTGCATACACATTGCGAAAGTTTCAATTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCAGATTAACTCAAAATAGCAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTCAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGAGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAAGTATGAGAACATCGCTTGCATTCGCACG ]
[+] EMBL BX620095 [ GCA GATANCTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCCAAAAACGGTTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGATAAGCTGGCTATCGGTATGGAGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAAGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAACTACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCTGTATCCGGATCCGCACTTCAAAAAGGCGAAACACAAGTGGCGCATTATTAACCCAACCCTGTTGAGTGAGTATGCGTACGTGCTGCGTCCAGGAGGCAAAATTTATACTGTAACCGACGTGCGAGAGCTGCACGAATGGATGTGTAAGCATATCGAAGAGCATCCATGCTTCAAGCGTTTGCCAGACACTGAAGCTCAGGAGGACATTCTCGCCCCAAAGCTGCTGGATAGCAGCGAAGAA]
consensusID : consensus_9437#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 772 fasta sequence
[TCAATTTCGCGGAATCTTTGTCTGGATAAACTGTTTTGCCTTAAATTTCGTT--CGCATCATTGAGCGTGGAATGCTTTAAATTTCGTGTAAAAGAGCTCGCTAAAACTCGTGCGATTAGTGCTCTTTATTTTGTAAAGGTTAGGAAGTGTTCT------GCTGGGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACGTTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCACATGCGGCACCTCGACTTGGACGAGCCAAAGAGCTCGAAGGACTACGGGGAGATGGTGTGCGGTGGGTGCATGGAAGGCGAATCCGTTTTTGCAGAATTATGTGGGCAAAATTGA]
[+] EMBL BX604194 [TCAATTTCGCGGAATCTTTGTCTGGATAAACTGTTTTGCCTTAAATTTCGTT CGCATCATCGAGCGTGGAATGCGTTAAATTTCGTGTAAAACAACTCGCGTAAACTCGTGCGATTAGTGCTATCTATTTTGTAAAGGTTAGGAAGTTTTCTGGAACAGCTGGGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTGCAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACGTTGGCCGGCAAGCACTGTACGCCTGTTTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGTTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTG CACCGGCCGTACCCGGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTA CACATGCGGCACCTCGACTTGGACGAGCCAAAGAGCTCGAAAGACTACGGGGAGATGGTGTGTGG ]
[+] EMBL BX622922 [ CCTAAAATTTCGTT CGCATCATTGAGCGTGGAATGCTTTAAATTTCGTGTAAAAGAGCTCGCTAAAACTCGTGCGATTAGTGCTCTTTATTTTGTAAAGGTTAGGAAGTGTTCT GCTGGGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACGTTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCACATGCGGCACCTCGACTTGGACGAGCCAAAGAGCTCGAAGGACTACGGGGAGATGGTGTGCGGTGGGTGCATGGAAGGCGAATCCGTTTTTGCAGAATTATGTGGGCAAAATTGA]
[+] EMBL AL931172 [ gctaaTCGTTCCCGCATCATTG GCGTGGAATGCTT AA TTCGTGTAAAAGAGCTCGCTAAAACTCGTGCGATTAGTGCTCTTTA TTTGTAAAGGTTAGGAAGTGTTCTGAACA GCTGGGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAA ]
[+] EMBL BX623256 [ GCTTTAAATTTCGTGTAAAAGAGCTCGCTAAAACTCGTGCGATTAGTGCTCTTTATTTTGTAAAGGTTAGGAAGTGTTCT GCTGGGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACG AAAGAATTGCACCTACACGAAGGGATACGTTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCACATGCGGCACCTCGACTTGGACGAGCCAAAGAGCTCGAAGGACTACCGGGAGATGGTGTGCGGTGGGTGCATGGAA GCGAATNCGTTTTTGCAGAATTAT ]
[+] EMBL BX622244 [ GCTCTTTATTTTGTAAAGGTTAGGAAGTGTTCT GCTGGGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACGTTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCACATGCGGCACC ]
consensusID : consensus_9437#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 731 fasta sequence
[CCGCGGACGCGTGGGTTCAATTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCAAATAATTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGAGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAAGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAACTACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCTGTATCCGGATCCGCACTTCAAAAGGCGAAACACCAGTGGCGCATTATTAACCCCACCCCTGATGAGTGAGTATGCGTACGTGCTGCGTCCAGGAGGCAAAATTATACTGGAACCGACGTGCGAAAGCTGCCCGAATGGATGTGTAAGCATATCGAAGAGCTTCCTGGTTCAAGCGTTTGCCAAAACTGAAGCTCAGGAGGAATTCTCGC]
[+] EMBL BM657746 [CCGCGGACGCGTGGGTTCAATTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCAAATAATTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGAGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAAGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAACTACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCTGTATCCGGATCCGCACTTCAAAAGGCGAAACACCAGTGGCGCATTATTAACCCCACCCCTGATGAGTGAGTATGCGTACGTGCTGCGTCCAGGAGGCAAAATTATACTGGAACCGACGTGCGAAAGCTGCCCGAATGGATGTGTAAGCATATCGAAGAGCTTCCTGGTTCAAGCGTTTGCCAAAACTGAAGCTCAGGAGGAATTCTCGC]
[+] EMBL BM615366 [ ccgAAGCAAATAGACTGCTATGCAAATAATTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGAGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAAGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAACTACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCT ]
consensusID : consensus_9437#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 585 fasta sequence
[GATCNCCCGAGTGTGTAAAGAGCTCGCTAAACTCGTGCGATTAGTGCTCTTTATTTGTAAAGGTTAGGAAGTGTTCTGCTGGGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACGTTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCACAT]
[+] EMBL AL931875 [GATCNCCCGAGTGTGTAAAGAGCTCGCTAAACTCGTGCGATTAGTGCTCTTTATTTGTAAAGGTTAGGAAGTGTTCTGCTGGGCTAACTACAAGATGGAACAAAAGGCGGAACAAGACCAGGATACGTCCTACGTGACGATGCCGGACATTTTACAGGAGCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTGTTGGGTGGGTCGGACGAAAAGAATTGCACCTACACGAAGGGATACGTTGGCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTCCCGGAAGCGCGGGGTATCGAGTCGAAGCGCAGCGGCATCTGTTTGGCCTGCTCGCTGCAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGATTGCGGTGGGCCGCGCATGCCGGAGGTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCGAACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCGTACCCCGATCCGGACGATGACGTGCAGGACGAAATGGTCCAGTGCGTGGTGTGCGAGGATTGGTACCACAT]
consensusID : consensus_9437#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 527 fasta sequence
[GCTCGAGGCAGAATCGCCCCGAGGTGAAATTGCATACACATTGCGAAAGTTTCAATTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCAGATAACTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGACGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAACGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAATACTTCC]
[+] EMBL AL696806 [GCTCGAGGCAGAATCGCCCCGAGGTGAAATTGCATACACATTGCGAAAGTTTCAATTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCAGATAACTCAAAATAGTAGCTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTATTGACGATCATGTGAAACTGCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCGCTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATCCCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCCGGGTTTCTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGACGATTCGTGTAAAAGTGTCCGACTATGTGATGGACCGTATTAAAGCACTACGCCAGCGGCACAAGGGAAACGTATGAGAACATCGCTTGCATTCGCACGAACGCCATGAAATACTTACCCAATACTTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9437#1 -------CCGGCCAGGAACACGCGATACCGGCATTGCATAC-ACATTGCGAAAGTTTCAA 52
consensus_9437#5 ----GCTCGAGGCAGAATCGCCCCGAGGTGAAATTGCATAC-ACATTGCGAAAGTTTCAA 55
consensus_9437#3 ---------------------------------CCGCGGAC-GCGT------GGGTTCAA 20
consensus_9437#2 TCAATTTCGCGGAATCTTTGTCTGGATAAACTGTTTTGCCTTAAATTTCGTTCGCATCAT 60
consensus_9437#4 ------------------------------------------------------------
consensus_9437#0 -GCAGATCCCCCGAGGTTAGTCTGGATAAACTGTTTTGCCTAAAATTTCGTTCGCATCAT 59
consensus_9437#1 TTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCAAATAATTCAAAATA 112
consensus_9437#5 TTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCAGATAACTCAAAATA 115
consensus_9437#3 TTCCAATATATTGTTGACCATCAACAAGCAAATAGACTGCTATGCAAATAATTCAAAATA 80
consensus_9437#2 TGAGCGTGGAATGCTTTAAATTTCGTGTAAAAGAGCTCGCTA---AAACTCGTGCGATTA 117
consensus_9437#4 ---------GATCNCCCGAGT---GTGTAAA-GAGCTCGCTA---AA-CTCGTGCGATTA 43
consensus_9437#0 TGAGCGTGGAATGCTTTAAATTTCGTGTAAAAGAGCTCGCTA---AAACTCGTGCGATTA 116
* * ** ** **** * * * **
consensus_9437#1 GTAG-CTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTA-----TTGACG 166
consensus_9437#5 GTAG-CTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTA-----TTGACG 169
consensus_9437#3 GTAG-CTTCATTTATTAACCGTACAGAACGCGTACCATGGAAGAGGCTA-----TTGACG 134
consensus_9437#2 GTGCTCTTTATTTTGTAAAGGT-TAGGAAGTGTTCTGCTGGGCTAACTACAAGATGGAAC 176
consensus_9437#4 GTGCTCTTTATTT-GTAAAGGT-TAGGAAGTGTTCTGCTGGGCTAACTACAAGATGGAAC 101
consensus_9437#0 GTGCTCTTTATTTTGTAAAGGT-TAGGAAGTGTTCTGCTGGGCTAACTACAAGATGGAAC 175
** *** **** *** ** ** * * ** * * *** * **
consensus_9437#1 ATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCG 226
consensus_9437#5 ATCATGTGAAACTGCCC-AAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCG 228
consensus_9437#3 ATCATGTGAAACTGCCCCAAAAACGATTCTATCGTCAACGGGCCCACTCGAATCCGATCG 194
consensus_9437#2 AAAAGGCGGAACAAGACCAGGATACGTCCTA-CGT-GACGATGCCGGACATTTTACAGGA 234
consensus_9437#4 AAAAGGCGGAACAAGACCAGGATACGTCCTA-CGT-GACGATGCCGGACATTTTACAGGA 159
consensus_9437#0 AAAAGGCGGAACAAGACCAGGATACGTCCTA-CGT-GACGATGCCGGACATTTTACAGGA 233
* * * * *** * * * * *** *** *** ** * * *
consensus_9437#1 CTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATC 286
consensus_9437#5 CTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATC 288
consensus_9437#3 CTGATCATAGCTTCGATTACCCTTTGTTACCGGAATTGAGCAACTGGAATGAACTCTATC 254
consensus_9437#2 GCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTG-TTGGGTGGGTCGGACGAAAAGAATT 293
consensus_9437#4 GCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTG-TTGGGTGGGTCGGACGAAAAGAATT 218
consensus_9437#0 GCAGGAAGAGCTGGAAGAAACATCGCGTGCCGTG-TTGGGTGGGTCGGACGAAAAGAATT 292
* **** * * * * * *** *** * * * * *** **
consensus_9437#1 CCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGC-GGGTTT 345
consensus_9437#5 CCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGCCGGGTTT 348
consensus_9437#3 CCAACATTGGCAATCGTCAGGTTGTATTTGCCGACATTGGTTGCGGATATGGC-GGGTTT 313
consensus_9437#2 GCACCTACACGAAGGGATACGTTG-GCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTC 352
consensus_9437#4 GCACCTACACGAAGGGATACGTTG-GCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTC 277
consensus_9437#0 GCACCTACACGAAGGGATACGTTG-GCCGGCAAGCACTGTACGCCTGTCTGACCTGCGTC 351
** * ** * * **** ** ** ** ** * ** * * *
consensus_9437#1 CTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGA-GATTCGTGT 404
consensus_9437#5 CTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGACGATTCGTGT 408
consensus_9437#3 CTGGTAACACTGGGCGAAACATTCCCGGACAAGCTGGCTATCGGTATGGA-GATTCGTGT 372
consensus_9437#2 CCGGAAGCGCGGGGT--ATCGAGTCGAAGCGCAGCGGC-ATCTGTTTGGCCTGCTCGCTG 409
consensus_9437#4 CCGGAAGCGCGGGGT--ATCGAGTCGAAGCGCAGCGGC-ATCTGTTTGGCCTGCTCGCTG 334
consensus_9437#0 CCGGAAGCGCGGGGT--ATCGAGTCGAAGCGCAGCGGC-ATCTGTTTGGCCTGCTCGCTG 408
* ** * * * *** * * * * *** *** ** *** ***
consensus_9437#1 AAAAGTGTC--CGACTATG---TGATGGA-CCGTAT-TAAAGCACTACGCCAGCGGCAC- 456
consensus_9437#5 AAAAGTGTC--CGACTATG---TGATGGA-CCGTAT-TAAAGCACTACGCCAGCGGCAC- 460
consensus_9437#3 AAAAGTGTC--CGACTATG---TGATGGA-CCGTAT-TAAAGCACTACGCCAGCGGCAC- 424
consensus_9437#2 CAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGAT 469
consensus_9437#4 CAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGAT 394
consensus_9437#0 CAGTGCCACGACAATCACGAGCTGCTGGAGCTGTACACGAAGCGTCACTTTCGGTGCGAT 468
* * * * * * * ** **** * *** **** ** * **
consensus_9437#1 ----AAGGGAAA-GTATGA-GAACATCGCTTGCATTC-GCACGAACGCCATGAAATACTT 509
consensus_9437#5 ----AAGGGAAACGTATGA-GAACATCGCTTGCATTC-GCACGAACGCCATGAAATACTT 514
consensus_9437#3 ----AAGGGAAA-GTATGA-GAACATCGCTTGCATTC-GCACGAACGCCATGAAATACTT 477
consensus_9437#2 TGCGGTGGGCCGCGCATGCCGGAGGTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCG 529
consensus_9437#4 TGCGGTGGGCCGCGCATGCCGGAGGTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCG 454
consensus_9437#0 TGCGGTGGGCCGCGCATGCCGGAGGTGAAGTGCAAGCTGGAACCGCGCAAGGAGGAAGCG 528
*** * *** * * * **** * * * *** * ** *
consensus_9437#1 ACCCAAC--TACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCTGTATCCGGATCCG 567
consensus_9437#5 ACCCAA---TACTTCC-------------------------------------------- 527
consensus_9437#3 ACCCAAC--TACTTCCGAAAACATCAGCTGGAAAAGTTGTTCTTCCTGTATCCGGATCCG 535
consensus_9437#2 AACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCG 589
consensus_9437#4 AACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCG 514
consensus_9437#0 AACGACCGGAACCGGTACAATCAAAACTTCTCCGGCCTGTACTGCGTCTGCCACCGGCCG 588
* * * **
consensus_9437#1 CACTTCAAAAAGGCGAAACACAAGTGGCGCATTATTAACCCAACCC-TGTTGAGTGAGTA 626
consensus_9437#5 ------------------------------------------------------------
consensus_9437#3 CACTTCAAAA-GGCGAAACACCAGTGGCGCATTATTAACCCCACCCCTGATGAGTGAGTA 594
consensus_9437#2 TACCCCGATCCGGACGATGACGTGCAGGACGAAAT-GGTCCAGTGCGTGGTGTGCGAGGA 648
consensus_9437#4 TACCCCGATCCGGACGATGACGTGCAGGACGAAAT-GGTCCAGTGCGTGGTGTGCGAGGA 573
consensus_9437#0 TACCCCGATCCGGACGATGACGTGCAGGACGAAAT-GGTCCAGTGCGTGGTGTGCGAGGA 647
consensus_9437#1 TGCGTACGTGCTGCGTCCAGGAGGCAAAATTTATACTGTAACCGACGTGCGAGAGCTGCA 686
consensus_9437#5 ------------------------------------------------------------
consensus_9437#3 TGCGTACGTGCTGCGTCCAGGAGGCAAAATT-ATACTGGAACCGACGTGCGAAAGCTGCC 653
consensus_9437#2 TTGGTACCACATGCGGCACCTCGACTTGGAC-GAGCCAAAGAGCTCGAAGGACTACGGGG 707
consensus_9437#4 TTGGTACCACAT------------------------------------------------ 585
consensus_9437#0 TTGGTACCACATGCGGCACCTCGACTTGGAC-GAGCCAAAGAGCTCGAAGGACTACCGGG 706
consensus_9437#1 CGAATGGATGTGTAAGCATATCGAAGAGCATCCATGCTTCAAGCGTTTGCCAGACACTGA 746
consensus_9437#5 ------------------------------------------------------------
consensus_9437#3 CGAATGGATGTGTAAGCATATCGAAGAGCTTCC-TGGTTCAAGCGTTTGCCAAA-ACTGA 711
consensus_9437#2 AGATGGTGTGCGGTGGGTGCATGGAAGGCGAATCCGTTTTTGCAGAATTATGTGGGCAAA 767
consensus_9437#4 ------------------------------------------------------------
consensus_9437#0 AGATAGTA-GTGCCGGGGTAATGTTTTAAAGCAATTGAATAGCATTATTAACCCAACCCT 765
consensus_9437#1 AGCTCAGGAGGACATTCTCGCCCCAAAGCTGCTGGATAGCAGCGAAGAA----------- 795
consensus_9437#5 ------------------------------------------------------------
consensus_9437#3 AGCTCAGGAGGA-ATTCTCGC--------------------------------------- 731
consensus_9437#2 ATTGA------------------------------------------------------- 772
consensus_9437#4 ------------------------------------------------------------
consensus_9437#0 GTTGAGTGAGTATGCGTACGTGCTGCGTCCAGGAGGCAAAATTTATACTGTAACCGACGT 825
consensus_9437#1 ----------------------------------------------------
consensus_9437#5 ----------------------------------------------------
consensus_9437#3 ----------------------------------------------------
consensus_9437#2 ----------------------------------------------------
consensus_9437#4 ----------------------------------------------------
consensus_9437#0 GCGAGAGCTGCACGAATGGATGTGTAAGCATATCGAAGAGCATCCATGCTTC 877
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||