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Anopheles gambiae
cluster # 9438 cluster # 9438       Sequences # 17       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9438#0 length = 842 sequences # 10  
consensus_9438#1 length = 521 sequences # 5  
consensus_9438#2 length = 475 sequences # 1  
consensus_9438#3 length = 106 sequences # 1  

consensusID : consensus_9438#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 842
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGGAATTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAACACATTA-CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG-AGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC-GGTTGTAAATAAACAGTGGCGACTGTAGCGTTAACTGGAACACGGGTGTTGCCGGAACGTATCTATTCCCGTGTTTGAAGGCGGTGGAGGCGTGTCTCCTGGACGGCGTCGCATATCCTGCCCCTGTGTCTGCTACAACGACCGGGTATGACTGAGAAAACTTACCATCTCGCTCGGTAATCGTCTTTTCTGCTTGGCCTGCTGGATTATACGCACATTTGCTACACTCTTCCGTTGAACCATAGAGGGACCGGTACCTCTATCTCTTTACACCAGACCTCTGAGAACGTCATCGTGCTGCCCAGTCATCATTATCGATACCTCGTTGCCATTTATTTTTATAATTTATACCGGTCAAAGTTGTGCCTTGGGGCAGATA]

[+] EMBL BM609227             [CCGCCCACGCGTCCGCCCACGCGTCCGGGAATTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAACACATTA CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG AGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC GG                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM594628             [            CCGCCCACGCGTCCG   ATTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCACACCGGCCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTGTGGCATCTCTTCCACGAGTACGAACACATTA CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG AGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC GGTTGTAAATAAACAGTGGCGACTGTAGCGTTAACTGG                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM643791             [                        CCGGGAATTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAACACATTA CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG AGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC GGTTGTAAATAAACAGTGGCGACTGTAGCGTTAACTGG                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM646697             [                        CCGGGAATTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCACACCGGCCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTGTGGCATCTCTTCCACGAGTACGAACACATTA CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG AGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC GGTTGTAAATAAACAGTGGCGACTGTAGCGTTAACTGG                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM584697             [                             ccgTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCACACCGGCCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTGTGGCATCTCTTCCACGAGTACGAACACATTA CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCGAAGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC GGTTGTAAATAAACAGTGGCGACTGTAGCGTTAACTG                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX619529             [                                 TCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGCCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTGTGGCATCTTTTCCACGAGTACGAACACATTA CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG AGTAGGAGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTCNGGTTGTAAATAAACAGTGGCGACTGTAGCGTAAACTGGAACACGGGTGTTGCGGGANCGTATCTATTCCGGTGTTTGAANGCGGTGGAGGCGTGTCTCCCGGGCGGCGTCGCATATCCTGCCCCTGTGTCTGCTACAACGACCGGGTATGA                                                                                                                                                                                                                                    ]
[+] EMBL BM642604             [                                                                                          TTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAACACATTA CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG AGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC GGTTGTAA                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09798             [                                                                                                           TCGGAAGATTGCTGCAACGCA CGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAACACATTA CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG AGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC GGTTGTAAATAAACAGTGGCGACTGTAGCGTTAACTGGAACACGGGTGTTGCCGGAACGTATCTATTCCCGTGTTTGAAGGCGGTGGAGGCGTGTCTCCTGGACGGCGTCGCATATCCTGCCCCTGTGTCTGCTACAACGACCGGGTATGACTGAGAAAACTTACCATCTCGCTCGGTAATCGTCTTTTCTGCTTGGCCTGCTGGATTATACGCACATTTGCTACACTCTTCCGTTGAACCATAGAGGGACCGGTACCTCTATCTCTTTACACCAGACCTCTGAGAACGTCATCGTGCTGCCCAGTCATCATTATCGATACCTCGTTGCCATTTATTTTTATAATTTATACCGGTCAAAGTTGTG              ]
[+] EMBL CNS08VKY             [                                                                                                           TCGGAAGATTGCTGCAACGCA CGCCGCT CCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAACACATTA CGGGTGAATTCGACTATTCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG AGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC GGTTGTAAATAAACAGTGGCGACTGTAGC                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS09799             [                                                                                                                                                                                                                                                           TCCCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAACACATTACCGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCG AGTAGGGGAGTTCCCTAACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTC GGTTGTAAATAAACAGTGGCGACTGTAGCGTTAACTGGAACACGGGTGTTGCCGGAACGTATCTATTCCCGTGTTTGAAGGCGGTGGAGGCGTGTCTCCTGGACGGCGTCGCATATCCTGCCCCTGTGTCTGCTACAACGACCGGGTATGACTGAGAAAACTTACCTTCTCGCTCGGTAATCGTCTTTTCTGCTTGGCCTGCTGGATTATACGCACATTTGCTACACTCTTCCGTTGAACCATAGAGGGACCGGTACCTCTATCTCTTTACACCAGACCTCTGAGAACGTCATCGTGCTGCCCAGTCATCATTATCGATACCTCGTTGCCATTTATTTTTATAATTTATACCGGTAAAAGTTGTGCCTTGGGGCAGATA]


>consensus_9438#0 CCGCCCACGCGTCCGCCCACGCGTCCGGGAATTTCGAGAAACCGTGTTTGCGTGAAATTT TCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCT GCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCG CCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGT CGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGA GTACGAACACATTACGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGA GCTGGGCATCCCGGCGGACGATGTCGAGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCG TGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTCGGTTGTAAATAAACAGT GGCGACTGTAGCGTTAACTGGAACACGGGTGTTGCCGGAACGTATCTATTCCCGTGTTTG AAGGCGGTGGAGGCGTGTCTCCTGGACGGCGTCGCATATCCTGCCCCTGTGTCTGCTACA ACGACCGGGTATGACTGAGAAAACTTACCATCTCGCTCGGTAATCGTCTTTTCTGCTTGG CCTGCTGGATTATACGCACATTTGCTACACTCTTCCGTTGAACCATAGAGGGACCGGTAC CTCTATCTCTTTACACCAGACCTCTGAGAACGTCATCGTGCTGCCCAGTCATCATTATCG ATACCTCGTTGCCATTTATTTTTATAATTTATACCGGTCAAAGTTGTGCCTTGGGGCAGA TA



consensusID : consensus_9438#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 521
fasta sequence
                              [CCGCTGGCTGTCACTTGTTTGTTGTTTTTGTGAGGAGAGGAATTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCAC-GGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGCCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGA-GATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGA-TTC-ATGTGGTGGTGGGTGCTGTGGCATCTTTTCCACG-AGT-ACG-AAC-ACATT-A-CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGG-ACGATGTCGAGTAGGAGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAA-GATTCGGTTGTAAAT-AAACAGTGGCGACTGTAGCGTAAACTGGAANCACGGG]

[+] EMBL BM603080             [CCGCTGGCTGTCACTTGTTTGTTGTTTTTGTGAGGAGAGGAATTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCAC GGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGCCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGA GATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGA TTC ATGTGGTGGTGGGTGCTGTGGCATCTTTTCCACG AGT ACG AAC ACATT A CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGG ACGATGTCGAGTAGGAGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAA GATTCGGTTGTAAAT AAACAGTGGCGACTGTAGCGTAAACTGG         ]
[+] EMBL BM654192             [                                      ccgATTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCAC GGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCACACCGGCCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGA GATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGA TTC ATGTGGTGGTGGGTGCTGTGGCATCTCTTCCACG AGT ACG AAC ACATT A CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGG ACGATGTCGAGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAA GATTCGGTTGTAAAT AAACAGTGGCGACTGTAGC                  ]
[+] EMBL BX619536             [                                         tTTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCAC GGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGCCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGA GATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGA TTC ATGTGGTGGTGGGTGCTGTGGCATCTTTTCCACG AGT ACG AAC ACATT A CGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGNACGATG                                                                                                                                 ]
[+] EMBL BX619543             [                                          TTTCGAGAAACCGTGTTTGCGTGAAATTTTCGGGAGCTGCACGGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGCCTGCGCAACCAGNTCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGANGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGANTTCNATGTGGTGGTGGGTGCTGTGGCATCTTTTCCNCGAAATAACGAAACAACATTAA CGGGTG                                                                                                                                                                                                 ]
[+] EMBL BX619544             [                                                     CGTNNTTGCGTGAAATTTTCGGGAGCTGCAC GGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGCCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGA GATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGA TTC ATGTGGTGGTGGGTGCTGTGGCATCTTTTCCACG AGT ACG AAC ACATT AGCGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGG ACGATGTCGAGTAGGAGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAANGATTCGGTTGTAAATAAAACAGTGGCGACTGTAGCGTAAACTGGAANCACGGG]


>consensus_9438#1 CCGCTGGCTGTCACTTGTTTGTTGTTTTTGTGAGGAGAGGAATTTCGAGAAACCGTGTTT GCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTC GGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGCCTGCGCAAC CAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATG CTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTGTGGCAT CTTTTCCACGAGTACGAACACATTACGGGTGAATTCGACTATCCGGATCCGTCCTCGTGG ACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCGAGTAGGAGAGTTCCCTCACTGCC TGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTCGGTTGT AAATAAACAGTGGCGACTGTAGCGTAAACTGGAANCACGGG



consensusID : consensus_9438#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 475
fasta sequence
                              [CAGGCAGAATCGGCACGNTGGATAATTTCGAGAAACGTGTCTGCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAACACATTACGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCGAGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTCGGGTTGTAAATAAACAGTG]

[+] EMBL BX468869             [CAGGCAGAATCGGCACGNTGGATAATTTCGAGAAACGTGTCTGCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAACACATTACGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCGAGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTCGGGTTGTAAATAAACAGTG]


>consensus_9438#2 CAGGCAGAATCGGCACGNTGGATAATTTCGAGAAACGTGTCTGCGTGAAATTTTCGGGAG CTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTCGGAAGATTGCTGCAACGC AGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAACCAGATCGTGCGCCATGGC CACGACTGGTCGTATCGAGTGAACGGCCCGAAGCCGGAGATGCTGGCCCGCGTCGGTGCA CAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTGGCATCTCTTCCACGAGTACGAA CACATTACGGGTGAATTCGACTATCCGGATCCGTCCTCGTGGACCAACGCCGAGCTGGGC ATCCCGGCGGACGATGTCGAGTAGGGGAGTTCCCTCACTGCCTGCAAACTCCGTGCTTCA ATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTCGGGTTGTAAATAAACAGTG



consensusID : consensus_9438#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 106
fasta sequence
                              [CAACCNCGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAATGCCGGANGATGCTGGCCCGCTGTCAGGTCGCACNGAGTCGGACCGCGCGG]

[+] EMBL BX619537             [CAACCNCGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAATGCCGGANGATGCTGGCCCGCTGTCAGGTCGCACNGAGTCGGACCGCGCGG]


>consensus_9438#3 CAACCNCGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAATGCCG GANGATGCTGGCCCGCTGTCAGGTCGCACNGAGTCGGACCGCGCGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9438#0      ----------CCGCCCACGCGTCC-GCCCACGCGTCCGGGAATTTCGAGAAACCGTGTTT 49
consensus_9438#2      ---------------CAGGCAGA--ATCGGCACGNTGGATAATTTCGAGAAAC-GTGTCT 42
consensus_9438#1      CCGCTGGCTGTCACTTGTTTGTTGTTTTTGTGAGGAGAGGAATTTCGAGAAACCGTGTTT 60
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      GCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTC 109
consensus_9438#2      GCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTC 102
consensus_9438#1      GCGTGAAATTTTCGGGAGCTGCACGGTGCAAAAATGCTGGCTTCCCGGGCACTGCTGGTC 120
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      GGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAAC 169
consensus_9438#2      GGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGTCTGCGCAAC 162
consensus_9438#1      GGAAGATTGCTGCAACGCAGCGCCGCTGCCGCGAAGGTCAACCCCACCGGCCTGCGCAAC 180
consensus_9438#3      --------------------------------------------------------CAAC 4
                                                                              ****

consensus_9438#0      CA-GATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAA-GCCGGAG- 226
consensus_9438#2      CA-GATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAA-GCCGGAG- 219
consensus_9438#1      CA-GATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAA-GCCGGAG- 237
consensus_9438#3      CNCGATCGTGCGCCATGGCCACGACTGGTCGTATCGAGTGAACGGCCCGAATGCCGGANG 64
                      *  ************************************************ ******  

consensus_9438#0      ATGCTGGCCCGC-GTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTG 285
consensus_9438#2      ATGCTGGCCCGC-GTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTTTG 278
consensus_9438#1      ATGCTGGCCCGC-GTCGGTGCACAGGTCGCCGGCGGATTCATGTGGTGGTGGGTGCTGTG 296
consensus_9438#3      ATGCTGGCCCGCTGTCAGGTCGCACNGAGTCGGA----CCGCGCGG-------------- 106
                      ************ *** *  * **    * ***      *  * **              

consensus_9438#0      GCATCTCTTCCACGAGTACGAACACATTACGGGTGAATTCGACTATCCGGATCCGTCCTC 345
consensus_9438#2      GCATCTCTTCCACGAGTACGAACACATTACGGGTGAATTCGACTATCCGGATCCGTCCTC 338
consensus_9438#1      GCATCTTTTCCACGAGTACGAACACATTACGGGTGAATTCGACTATCCGGATCCGTCCTC 356
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      GTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCGAGTAGGGGAGTTCCCTCAC 405
consensus_9438#2      GTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCGAGTAGGGGAGTTCCCTCAC 398
consensus_9438#1      GTGGACCAACGCCGAGCTGGGCATCCCGGCGGACGATGTCGAGTAGGAGAGTTCCCTCAC 416
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      TGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTCGG 465
consensus_9438#2      TGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTCGG 458
consensus_9438#1      TGCCTGCAAACTCCGTGCTTCAATTCTGTGCTTTTTAGAACAACATCCAGCAAGATTCGG 476
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      -TTGTAAATAAACAGTGGCGACTGTAGCGTTAACTGGAACACGGGTGTTGCCGGAACGTA 524
consensus_9438#2      GTTGTAAATAAACAGTG------------------------------------------- 475
consensus_9438#1      -TTGTAAATAAACAGTGGCGACTGTAGCGTAAACTGGAANCACGGG-------------- 521
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      TCTATTCCCGTGTTTGAAGGCGGTGGAGGCGTGTCTCCTGGACGGCGTCGCATATCCTGC 584
consensus_9438#2      ------------------------------------------------------------
consensus_9438#1      ------------------------------------------------------------
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      CCCTGTGTCTGCTACAACGACCGGGTATGACTGAGAAAACTTACCATCTCGCTCGGTAAT 644
consensus_9438#2      ------------------------------------------------------------
consensus_9438#1      ------------------------------------------------------------
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      CGTCTTTTCTGCTTGGCCTGCTGGATTATACGCACATTTGCTACACTCTTCCGTTGAACC 704
consensus_9438#2      ------------------------------------------------------------
consensus_9438#1      ------------------------------------------------------------
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      ATAGAGGGACCGGTACCTCTATCTCTTTACACCAGACCTCTGAGAACGTCATCGTGCTGC 764
consensus_9438#2      ------------------------------------------------------------
consensus_9438#1      ------------------------------------------------------------
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      CCAGTCATCATTATCGATACCTCGTTGCCATTTATTTTTATAATTTATACCGGTCAAAGT 824
consensus_9438#2      ------------------------------------------------------------
consensus_9438#1      ------------------------------------------------------------
consensus_9438#3      ------------------------------------------------------------
                                                                                  

consensus_9438#0      TGTGCCTTGGGGCAGATA 842
consensus_9438#2      ------------------
consensus_9438#1      ------------------
consensus_9438#3      ------------------
                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)