These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9445#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1038 fasta sequence [GGATGACAGTTCGCTCAGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA-CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC-GGCTGGTGCCGAACCGGCACG-ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG-G-G-C-CCGGG-AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT-GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG-----TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTGCTTAGTATTTAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CNS093ZD [GGATGACAGTTCGCTCAGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG G A CTCCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTGTACGATAATTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTG ] [+] EMBL CNS09FG4 [ CTCAGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA GTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTTAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG GCG C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTGTACGATAATTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGA ] [+] EMBL CNS09MUJ [ GGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG G G CGCCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGGAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGTGGGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTGTACGATAATTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAaaaaa ] [+] EMBL CNS093X2 [ ATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAG ] [+] EMBL CNS099K9 [ tCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG G GCC CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGGGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCAC ] [+] EMBL CNS097P3 [ TCTGGCGGAGGG AATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA GTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACGAACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG GAC C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGC ] [+] EMBL CNS098P6 [ CGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG G G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCAT ] [-] EMBL CNS093ZE [ AAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCCAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAAACGCTCAAAATGCGGGGCCAGGCGTTTTTCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAAAACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGG GCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCCACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTGTACGATAATTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTGCTTAGTATTTAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BX621803 [ AATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAAGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTGGAGTTTGCGACGGAACTGCAGAGCGGGGCG G C CCGGGAAAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAG ] [-] EMBL CNS097P4 [ ACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAAACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGTTCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTTAAGGGCACGTTCCAGGAGCGGCCAAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCT GTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGGACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCTACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCAT GTATTGTC GTTAGGg ] [-] EMBL CNS098P7 [ TTTTAGTGCAAAACTAGTGTAGTGTGCGCACAGCGAAAATGGACATCAGACCCAATTACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCCACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGTTCTCGAGCGCCACCAATGCGATGCGCACGATGCAA GGTTCCCCTTCTACGACAAGCCCATGCGCATCAAATACTCCAAAACCCACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCCAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGGACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCCACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGTACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCa ] [-] EMBL CNS099KA [ TCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGTTCTCGAGCGCCACCAATGCGATGCGCACGATGCAA GGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCCACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGGGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGTACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTGCT ] [-] EMBL CNS09FG5 [ ATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGCGGGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCCACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAc ] consensusID : consensus_9445#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 698 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAACTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAATGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCACGGAGGTGCGGCTGGTGCCGAACCGGCACGACATTGCGTTCGTGGAGTTTGCGAC] [+] EMBL BM592252 [CCGCCCACGCGTCCGCCCACGCGTCCGGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAACTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAATGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCACGGAGGTGCGGCTGGTGCCGAACCGGCACGACATTGCGTTCGTGGAGTTTGCGAC] consensusID : consensus_9445#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 629 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAAGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATG] [+] EMBL BM589291 [CCGCCCACGCGTCCGCCCACGCGTCCGCATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAAGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATG] consensusID : consensus_9445#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 555 fasta sequence [GGCAGAATCCGGCACNGAGGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGACAGGCGAAGGAAGCTGAAAGAATGCGGGCGAGGTGGGGTGCGACGNAACAAGTTCG] [+] EMBL BX468347 [GGCAGAATCCGGCACNGAGGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGACAGGCGAAGGAAGCTGAAAGAATGCGGGCGAGGTGGGGTGCGACGNAACAAGTTCG] [+] EMBL BX615123 [ AAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTATATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCca ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9445#1 CCGCCCACGCGTCCGCCCACG--CGTCCG-----------GTCCTTTCTGGCGGAGGGAA 47 consensus_9445#2 CCGCCCACGCGTCCGCCCACG--CGTCCGCATTGTTTAGCGTCCTTTCTGGCGGAGGGAA 58 consensus_9445#0 -GGATGACA-GTTCGCTCAGGG-CATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAA 57 consensus_9445#3 -GGCAGAATCCGGCACNGAGGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAA 59 * * * * * * * * ******************** consensus_9445#1 ATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGT 107 consensus_9445#2 ATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGT 118 consensus_9445#0 ATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGT 117 consensus_9445#3 ATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGT 119 ************************************************************ consensus_9445#1 GCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTA 167 consensus_9445#2 GCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTA 178 consensus_9445#0 GCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTA 177 consensus_9445#3 GCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTA 179 ********************** ***************** ******************* consensus_9445#1 CATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCAT 227 consensus_9445#2 CATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCAT 238 consensus_9445#0 CATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCAT 237 consensus_9445#3 CATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCAT 239 ************************************************ *********** consensus_9445#1 CTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGG 287 consensus_9445#2 CTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGG 298 consensus_9445#0 CTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGG 297 consensus_9445#3 CTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGG 299 ************************************************************ consensus_9445#1 CCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCA 347 consensus_9445#2 CCAAGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCA 358 consensus_9445#0 CCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCA 357 consensus_9445#3 CCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCA 359 *** ******************************************************** consensus_9445#1 AGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACAT 407 consensus_9445#2 AGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACAT 418 consensus_9445#0 AGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACAT 417 consensus_9445#3 AGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACAT 419 ************************************************************ consensus_9445#1 GATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACC 467 consensus_9445#2 GATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACC 478 consensus_9445#0 GATAGCGAA-CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACC 476 consensus_9445#3 GATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACC 479 ********* ************************************************** consensus_9445#1 CATCCAGACGGAGGATAAGA-AGGCGAAG-AAACTGAA-GAATGCGGGCGAGGTGGG-TG 523 consensus_9445#2 CATCCAGACGGAGGATAAGA-AGGCGAAG-AAGCTGAA-GAATGCGGGCGAGGTGGG-TG 534 consensus_9445#0 CATCCAGACGGAGGATAAGA-AGGCGAAG-AAGCTGAA-GAATGCGGGCGAGGTGGG-TG 532 consensus_9445#3 CATCCAGACGGAGGATAAGACAGGCGAAGGAAGCTGAAAGAATGCGGGCGAGGTGGGGTG 539 ******************** ******** ** ***** ****************** ** consensus_9445#1 CGAC-AAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAAC 582 consensus_9445#2 CGAC-AAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAAC 593 consensus_9445#0 CGAC-AAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAAC 591 consensus_9445#3 CGACGNAACAAGTTCG-------------------------------------------- 555 **** ***** * * consensus_9445#1 CTGCCGGAGGAAACGAATGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTC 642 consensus_9445#2 CTGCCGGAGGAAACGAACGAGATGATGCTGTCGATG------------------------ 629 consensus_9445#0 CTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTC 651 consensus_9445#3 ------------------------------------------------------------ consensus_9445#1 ACGGAGGTGCGGCTGGTGCCGAACCGGCACGACATTGCGTTCGTGGAGTTTGCGAC---- 698 consensus_9445#2 ------------------------------------------------------------ consensus_9445#0 AAGGAGGTGCGGCTGGTGCCGAACCGGCACGACATTGCGTTCGTAGAGTTTGCGACGGAA 711 consensus_9445#3 ------------------------------------------------------------ consensus_9445#1 ------------------------------------------------------------ consensus_9445#2 ------------------------------------------------------------ consensus_9445#0 CTGCAGAGCGGAGGGCCCGGGAAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGA 771 consensus_9445#3 ------------------------------------------------------------ consensus_9445#1 ------------------------------------------------------------ consensus_9445#2 ------------------------------------------------------------ consensus_9445#0 TGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAG 831 consensus_9445#3 ------------------------------------------------------------ consensus_9445#1 ------------------------------------------------------------ consensus_9445#2 ------------------------------------------------------------ consensus_9445#0 GATATGCTGCCGCTTTTACACTGGACGGAGATCGAGTGGAGTCATTCGGTTGTCGAGGCA 891 consensus_9445#3 ------------------------------------------------------------ consensus_9445#1 ------------------------------------------------------------ consensus_9445#2 ------------------------------------------------------------ consensus_9445#0 GCCACAGGTAAATTTTGAAGCTGTAACTTTGAACTCAATTGAACTGAAACCAATAAACCA 951 consensus_9445#3 ------------------------------------------------------------ consensus_9445#1 ------------------------------------------------------------ consensus_9445#2 ------------------------------------------------------------ consensus_9445#0 TGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTGCTTAGTATT 1011 consensus_9445#3 ------------------------------------------------------------ consensus_9445#1 --------------------------- consensus_9445#2 --------------------------- consensus_9445#0 TAAAAAAAAAAAAAAAAAAAAAAAAAA 1038 consensus_9445#3 --------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||