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Anopheles gambiae
cluster # 9449 cluster # 9449       Sequences # 17       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9449#0 length = 1274 sequences # 15  
consensus_9449#1 length = 468 sequences # 2  

consensusID : consensus_9449#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1274
fasta sequence
                              [CCGTGAACGTACACGATCGCACACACCACGACATTTCACCGGAAAATTACAGAATTTGTGTGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCTACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGATACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGT-AAGGGTCGCGGTCGGCA-GGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCAT-GGTGCTGGACGTGCTGAAACCGCTCACGCACAAGAAGCTGCTCGAGCACGAGTTGGAAGGGTTCGGGCTGCGGCTGAACAAGCAGCCGCCGAACATTTCCTACCGCCGGAAGGACAAGGGTGGAGTGAACCTGAACGCCACCGTAGCACAGTCGGAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCAATCTCTGCCCATCACCACTGGAACTTTGACGATTTGCTCGATATGATGTGG-CAGTATCTGAAGCCGGTGCGAATCTATACCAAACCGAAGGGCCAGCTGCCGGACTACAGCTCACCGATTGTGCTGC-ACCACGAGCATACTACCGTGGAAAGTTTCTGTTACAAGCTTCACCGAACGATTGCGAAAGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTCGGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAAAAGGTTTAAGGCAGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCGTCGATCGGTTTGAAGAAAAAC-AAAAGAACGTGCGCAAATAATTATGAACGTTGATCGCTTTAATACGCTCTTTTACAAGGATTATCTTTTATACACCGAAATGAAGCGAAAAACACGAACAGGGATGTTAGTGA]

[+] EMBL BM576495             [CCGTGAACGTACACGATCGCACACACCACGACATTTCACCGGAAAATTACAGAATTTGTGTGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCAACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCTCTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGATACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGT AAGGGTCGCGGTCGGCA GGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCATGGGTGCTGGACGTGCTGAAACCGCTCACGCACAAGAAGCTGCTCGAGCACGAGTTGGAAGGGTTCGGGCTGCGGCTGAACAAGCAGCCGCCGAACATTTCCTACCGCCGGAAGGACAAGGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM609654             [       ccgACACGATCGCACACACCACGACATTTCACCGGAAAATTACAGAATTTGTGTGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCAACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCTCTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGATACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGTAAAGGGTCGCGGTCGGCAGGGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCATGGGTGCTGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09EW2             [                   CACACA CACGACATTTCACCGGAAAATTACAGAATTTGTGTGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCAACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCTCTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGATACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGT AAGGGTCGCGGTCGGCA GGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCAT GGTGCTGGACGTGCTGAAACCGCTCACGCACAAGAAGCTGCTCGAGCACGAGTTGTAAGGGTTCGGGCTGCGGCTGAACAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM583645             [                             ccgATTTCGCCGGAAAATTACAGAATTTGTGTGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCAACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTTGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGATACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGT AAGGGTCGCGGTCGGCA GGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCAT GGTGCTGGACGTGCTGAAACCGCTCACGCACAAGAAGCTGCTCGAGCACGAGTTGGAAGGGTTCGGGCTGCGGCTGAACAAGCAGCCGCCGAACATTTCCTACCGCCGGAAGGACAAGGGCGGAGTGAACCTGAACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AGA280784            [                                tTTTCACCGGAAAATTACAGAATTTGTGTGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCTACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTAGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTTCACCACGCTGACGAACGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGATACAGCTGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX604408             [                                       CGGAAAATTACAGAATTTGTGTGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCTACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGATACATCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGT AAGGGTCGCGGTCGGCA GGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCAT GGTGCTGGACGTGCTGAAACCGCTCACGCACAAGAAGCTGCTCGAGCACGAGTTGGAAGGGTTCGGGCTGCGGCTGAAC AGCAGCCGCCCGACATTTCCTACCGCCGGAAGGACAAGGGTGGAGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM586297             [                                        ccgAAATTACAGAATTTGTGTGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCAACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM636328             [                                              ccgCAGAATTTGTGTGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCTACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTAGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGATACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGT AAGGGTCGCGGTCGGCA GGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCAT GGTGTTGGACGTGCTGAAACCGCTCACGCACAAGAAGCTGCTCGAGCACGAGTTGGAAGGGTTCGGGCTGCGGCTGAACAAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08ESQ             [                                                            ccgTGCTG GTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCTACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGATACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGT AAGGGTCGCGGTCGGCA GGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCAT GGTGCTGGACGTGCTGAAACCGCTCACGCACAAGAAGCTGCTCGAGCACGAGTTGTTAGGGTTCGGGCTGCGGCTGAACAAGCAGCCGCCGAACATTTCCTACCGCCGGAAGGACAAGGGTGGAGTGAACCTGAACGCCACCGTAGCACAGTCGGAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCAATCTCTGCCCATCACCACTGGAACTTTGACGATTTGCTCGATATGATGTGG CAGTATCTGAAGCCGGTGCGAATCTATACCAAACCGAAGGCCCAGCTGCCGGACTACAGCTCACCGATTGTGCTGC ACCACGAGCATACTACCGTGGAAAGTTTCTGTAACAAGCTTCACCGAACGATTGCGAAAGAATTTAAATATGCACTT                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08UO7             [                                                                         CACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCTACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGCATACGAGTCCACCACGCTGACGACCGTGCCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX604132             [                                                                                        TTTATCTCGTTCGTTCAATTATTTGACCTACTCCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGAGTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAAGGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATCGGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCCCTCGGTa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08ESR             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           aCGTGCCGGGCTGTATAAAGTAAAAGGGCGCCAAGATACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGT ACGGGTCGCGGTCGGCA GGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCAT GGTGCTGGACGTGCTGAAACCG TCACGCACAAGAAGCTGCTCGAGCACGAGTTGGAAGGGTTCGGGCTGCGGCTGAACAAGCAGCCGCCGAACATTTCCTACCACCGGAAGGACAAGGGTGGAGTGAACCTGAACGCCACCGTAGCACAGTCGGAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCAATCTCTGCCCATCACCACTGGAACTTTGACGATTTGCTCGATATGATGTGG CAGTATCTGAAGCCGGTGCGAATCTATACCAAACCGAAGGGCCAGCTGCCGGACTACAGCTCACCGATTGTGCTGC ACCACGAGCATACTACCGTGGAAAGTTTCTGTAACAAGCTTCACCGAACGATTGCGAAAGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTCGGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAAAAGGTTTAAGGCAGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCGTCGATCGGTTTGAAGAAAAAC AAAAGAACGTGCGCAAATAATTATGAACGTTGATCGCTTTAATACGCTCTTTTACAAGGATTATCTTTTATACACCGAAATGAAGCGAAAAACACGAACAGGGATGTTAGTGA]
[-] EMBL CNS09EW3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGGTGGCACGTACCTGCAATCTGATATTCAT GGTGCTGGACGTGCTGAAACCG TAACGCAAAAAAAGCTGCTCGAGCACGAGTTGGAAGGGTTCGGGCTGCGGCTGAACAAGCAGCCGCCGAACATTTCCTACCCCCGGAAGGACAAGGGTGGAGTGAACCTGAACGCCACCGTAGGACAGTCGGAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCAATTTCTGCCCATCACCACTGGAACTTTGACGATTTGCTCGATATGATGTGG CAGTATCTGAAGCTGGTGCGAATCTATACCAAACCGAAGGGCCAGCTGCCGGACTACAGCTCACCGATTGTGCTGC ACCACGAGCATACTACCGTGGAAAGTTTCTGTTACAAGCTTCACCGAACGATTGCGAAAGAATTTAAATATGGACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTCGGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAAAAGGTTTAAGGCAGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCGTCGATCGGTTTGAAGAAAAACTAAAAGAAg                                                                                                         ]
[-] EMBL CNS09GAV             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCTCTGCCCATCACCACTGGAACTTTGACGATTTGCTCGATATGATGTGGTCAGTATCTGAAGCTGGTGCGAATCTATACCAAACCGAAGGGCCGGCTGCCGGACTACAGCTCACCGATTGTGCTGCAACCACGAGCATACTACCGTGGAAAGTTTCTGTTACAAGCTTCACCGAACGATTGCGAAAGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTCGGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAAAAGGTTTAAGGCAGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCGTCGATCGGTTTGAAGAAAAAC AAAAGAACGTGCGCAAATAATTATGAA                                                                                      ]
[-] EMBL CNS08UO8             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGATTGTGCTGC ACCACGAGCATACTACCGTGGAAAGTTTCTGTTACAAGCTTCACCGAACGATTGCGAAAGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTCGGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAAAAGGTTTAAGGCAGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCGTCGATCGGTTTGAAGAAAAAC AAAAGAACGTGCGCAAATAATTATGAACGTTGATCGCTTTAATACGC CTTTTACAAGGATTATCTTTTATACACCGAAATGAAGCGAAA                       ]


>consensus_9449#0 CCGTGAACGTACACGATCGCACACACCACGACATTTCACCGGAAAATTACAGAATTTGTG TGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCTACT CCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGA GTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAA GGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATC GGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCC CTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGC ATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGAT ACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGTAAGGGTCGCGGTCG GCAGGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCATGGTGCTGGACGTGCTGAA ACCGCTCACGCACAAGAAGCTGCTCGAGCACGAGTTGGAAGGGTTCGGGCTGCGGCTGAA CAAGCAGCCGCCGAACATTTCCTACCGCCGGAAGGACAAGGGTGGAGTGAACCTGAACGC CACCGTAGCACAGTCGGAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCAATCTC TGCCCATCACCACTGGAACTTTGACGATTTGCTCGATATGATGTGGCAGTATCTGAAGCC GGTGCGAATCTATACCAAACCGAAGGGCCAGCTGCCGGACTACAGCTCACCGATTGTGCT GCACCACGAGCATACTACCGTGGAAAGTTTCTGTTACAAGCTTCACCGAACGATTGCGAA AGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTCGG TATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAAAAGGTTTAAGGCAG CTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCG TCGATCGGTTTGAAGAAAAACAAAAGAACGTGCGCAAATAATTATGAACGTTGATCGCTT TAATACGCTCTTTTACAAGGATTATCTTTTATACACCGAAATGAAGCGAAAAACACGAAC AGGGATGTTAGTGA



consensusID : consensus_9449#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 468
fasta sequence
                              [GATTTCGATCGAGGAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCGATCTCTGCCCATCATCACTGGAACTTTGACGATTTGCTCGATATGATGTGGCAGTATCTGAAGCTGGTACGAATCTATACCAAACCGAAGGGCCAGCTGCCGGACTACAGCTCACCGATTGTGCTGCACCACGAGCATACTACCGTGGAAAGTTTCTGTAACAAGCTTCACCGAACGATTGCGAAAGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTCGGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAGAAGGTTTAAGGCAGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCGTCGATTGGTTTGAAGAAAAACAAAAGAACGTGCGCAAATAATTATGAACGT]

[+] EMBL BX611397             [GATTTCGATCGAGGAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCGATCTCTGCCCATCATCACTGGAACTTTGACGATTTGCTCGATATGATGTGGCAGTATCTGAAGCTGGTACGAATCTATACCAAACCGAAGGGCCAGCTGCCGGACTACAGCTCACCGATTGTGCTGCACCACGAGCATACTACCGTGGAAAGTTTCTGTAACAAGCTTCACCGAACGATTGCGAAAGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTCGGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAGAAGGTTTAAGGCAGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCGTCGATTGGTTTGAAGAAAAACAAAAGAACGTGCGCAAATAATTATGAACGT]
[-] EMBL AGA283178            [                                                                                                                                                    CTGCCGGACTACAGCTCKCCGATTGTGCTGCACCACGAGCATACTACCGTGGAAAGTTTCTGTAACAAGCTTCACCGAACGATTGCGAAAGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATNAACCGCAAAAGGTCGGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAGAAGGTTTAAGGCAGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCG                                                   ]


>consensus_9449#1 GATTTCGATCGAGGAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCGATCTCTGC CCATCATCACTGGAACTTTGACGATTTGCTCGATATGATGTGGCAGTATCTGAAGCTGGT ACGAATCTATACCAAACCGAAGGGCCAGCTGCCGGACTACAGCTCACCGATTGTGCTGCA CCACGAGCATACTACCGTGGAAAGTTTCTGTAACAAGCTTCACCGAACGATTGCGAAAGA ATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTCGGTAT CGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAGAAGGTTTAAGGCAGCTG ATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTCCGTCG ATTGGTTTGAAGAAAAACAAAAGAACGTGCGCAAATAATTATGAACGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9449#0      CCGTGAACGTACACGATCGCACACACCACGACATTTCACCGGAAAATTACAGAATTTGTG 60
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      TGCTGCTGCGTGCCACTTCTATCTATGATTTATCTCGTTCGTTCAATTATTTGACCTACT 120
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      CCGAGCTGCTGCAAGAGCGTGCAAGATGAGTACGATTCTGGAAAAGATTGCTCAAATCGA 180
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      GTCGGAGATGGCTCGTACCCAACGTAACAAGGCTACGGCGGGACATTTGGGCTTGCTGAA 240
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      GGCACGGTTGGCCAAGCTGCGGCGCGAGCTCATCACTCCCAAGGGTGGCGGCGGTGCATC 300
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      GGAACAGGGTTTCGAAGTTTCCAAAACCGGTGACGCCCGGGTCGGCTTTGTTGGGTTTCC 360
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      CTCGGTGGGCAAATCGACCCTGCTGTCCAATCTGGCCGGTGTCTACTCGGAGGTGGCTGC 420
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      ATACGAGTTCACCACGCTGACGACCGTGCCGGGCTGTATCAAGTACAAGGGCGCCAAGAT 480
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      ACAGCTGCTGGATTTGCCCGGAATCATCGAAGGTGCGAAGGATGGTAAGGGTCGCGGTCG 540
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      GCAGGTAATTGCGGTGGCACGTACCTGCAATCTGATTTTCATGGTGCTGGACGTGCTGAA 600
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      ACCGCTCACGCACAAGAAGCTGCTCGAGCACGAGTTGGAAGGGTTCGGGCTGCGGCTGAA 660
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      CAAGCAGCCGCCGAACATTTCCTACCGCCGGAAGGACAAGGGTGGAGTGAACCTGAACGC 720
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      CACCGTAGCACAGTCG--GAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCAATC 778
consensus_9449#1      -----GATTTCGATCGAGGAGCTGGACGTCATCTATAAAATCCCGCACTGCGTACCGATC 55
                            *   *  ***  ************************************** ***

consensus_9449#0      TCTGCCCATCACCACTGGAACTTTGACGATTTGCTCGATATGATGTGGCAGTATCTGAAG 838
consensus_9449#1      TCTGCCCATCATCACTGGAACTTTGACGATTTGCTCGATATGATGTGGCAGTATCTGAAG 115
                      *********** ************************************************

consensus_9449#0      CCGGTGCGAATCTATACCAAACCGAAGGGCCAGCTGCCGGACTACAGCTCACCGATTGTG 898
consensus_9449#1      CTGGTACGAATCTATACCAAACCGAAGGGCCAGCTGCCGGACTACAGCTCACCGATTGTG 175
                      * *** ******************************************************

consensus_9449#0      CTGCACCACGAGCATACTACCGTGGAAAGTTTCTGTTACAAGCTTCACCGAACGATTGCG 958
consensus_9449#1      CTGCACCACGAGCATACTACCGTGGAAAGTTTCTGTAACAAGCTTCACCGAACGATTGCG 235
                      ************************************ ***********************

consensus_9449#0      AAAGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTC 1018
consensus_9449#1      AAAGAATTTAAATATGCACTTGTGTGGGGTTCGTCCGTCAAGCATCAACCGCAAAAGGTC 295
                      ************************************************************

consensus_9449#0      GGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAAAAGGTTTAAGGC 1078
consensus_9449#1      GGTATCGATCACGTGCTGAACGATGAGGATGTGGTGCAGATTGTAAAGAAGGTTTAAGGC 355
                      *********************************************** ************

consensus_9449#0      AGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTC 1138
consensus_9449#1      AGCTGATATATCGTGTTGAAAATGGGGCAATCAGCAGACGACACACCATCCCCGACTGTC 415
                      ************************************************************

consensus_9449#0      CGTCGATCGGTTTGAAGAAAAACAAAAGAACGTGCGCAAATAATTATGAACGTTGATCGC 1198
consensus_9449#1      CGTCGATTGGTTTGAAGAAAAACAAAAGAACGTGCGCAAATAATTATGAACGT------- 468
                      ******* *********************************************       

consensus_9449#0      TTTAATACGCTCTTTTACAAGGATTATCTTTTATACACCGAAATGAAGCGAAAAACACGA 1258
consensus_9449#1      ------------------------------------------------------------
                                                                                  

consensus_9449#0      ACAGGGATGTTAGTGA 1274
consensus_9449#1      ----------------
                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)