These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9458#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1885 fasta sequence [ACCCACGCGTCCGCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACTTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAGACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGATTTGCAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAGTACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCA-CCTGAGCGTGGATCTGCTGAACGCTCAGCACGCGATGGAGAAATACGCACAACAGTACCCGGCATTCCAGGACTCGCGAGAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTCACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATCCTGTTGCGAATCAAGAAGCAGGCCAACGACAATCCGGATCTGCGATAAGCAGCTCGCCACCAAGAATATCTATCACAATCCGCTCGTTTTGGTCTATTTGTGCGCGCCTCCTCCCCTTCCAGGCGGCATTATAATCACACGTACATACACACGGACATACACAAACCAAGACCTGTTTGTTTAAGTTTTTAAACTGTTGTGTTTTACGGTTCGAAACTATTGTTTTTTCGCGGGCGAGTTGTGTCCGCGCACCGAACCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGTTACCC-TATATGGCCGAAACCGATGGTGTTACGGGCGAATATCATACCTTTTAAAACTCATCTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGAAGCTCTAGAATGTTGATAACAAAAGGAAACACCCACAAAAACTATTCGCTACCACACAGTAAACTGTAAAAAAAGTGTCGCTATTAAAAAAAAGCCA-CCCT-CCCTTTTCGTAGTGTAATAACCATGCCACCACCCCCTACCCCTGCTCCTCTTTGGCAGGGCGCATCGAGATCTCTTGATCCCTGTTAACCTCGAACCACGCGGCAACCTCCATTTGGAATTGCGTTTGCGCATGTACGTACGTTGAGTCTTACAACACTTATATAGCAATGCTTATTATACATTG-----TTTTTTGTTAATAAATTAAACAGCATTAGATAAATAAGTGGTTAAGGCATGGAGCTGTTCCACACCGAAGCAAACGGACCAGGCGTACATACACACATACACAACACTCACACAACAGACCACCGTGGTGGTACCGGCCCGGTGGTCCAGGCAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAAGTAACCGAGAAC] [+] EMBL BM599942 [ACCCACGCGTCCGCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTGGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAGACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAA ] [+] EMBL BM624650 [ cCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACTTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGATTTGCAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAAGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCG ] [+] EMBL BM581114 [ ccGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACTTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAACAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCAGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGATTTGCAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAGTACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCATCTTGAGCGTGGATCTGCTGAACGCTCAGCA ] [+] EMBL BM577146 [ ccgGTGGACGCATCGAACTGCTACAAGAAGACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAATGAAGCAAACGATTTGCAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAGTACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCA CCTGAGCGTGGATCTGCTGAACGCTCAGCACGCGATGGAGAAATACGCACAACAGTACCCGGCATTCCAGGACTCGCGAGAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTCACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATCCTGTTGCGAATCAAGAAGCAGGCCAACGACAATCCGGATCTGCGATAAGCAGCTCGCCACCAAGAATATCTAT ] [+] EMBL BM626546 [ ccgGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAGTACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCA TCTGAGCGTGGATCTGCTGAACGCTCAGCACGCGATGGAGAAATACGCACAACAGTACCCGGCATTCCAGGACTCGCGAGAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTCACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATCCTGTTGCGAATCAAGAAGCAGGCCAACG ] [+] EMBL BM617806 [ ccgCGCACAACAGTACCCGGCATTCCAGGACTCGCGAGAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTCACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATCCTGTTGCGAATCAAGAAGCAGGCCAACGACAATCCGGATCTGCGATAAGCAGCTCGCCACCAAGAATATCTATCACAATCCGCTCGTTTTGGTCTATTTGTGCGCGCCTCCTCCCCTTCCAGGCGGCATTATAATCACACGTACATACACACGGACATACACAAACCAAGACCTGTTTGTTTAAGTTTTTAAACTGTTGTGTTTTACGGTTCGAAACTATTGTTTTTTCGCGGGCGAGTTGTGTCCGCGCACCGAACCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGTTACCC TATATGGCCGAAACCGATGGTGTTACGGGCGAATATCATACCTTTTAAAACTCATCTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGAAGCTCTAGAATGTTGATAACAAAAGGAAACACCCACAAAAACTATTCGCTACCACACAGTAAACTGTAAAAAAAGTGTCGCTATTAAAAAAAAGCCACCCCTCCCCTTTTCGTAGGGTAATAACCATGGCACCACCCCCTACCCCTGCTCCTCTTTGGGAGGGCGCATCGAGATCTCTTGATCCCTGGTAACCTCGAACCAC ] [+] EMBL BX617757 [ GAACCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGTTACCCAAATACAGCCGAAACCGATGGTGGTACGGGCGTATATCATACCTTTTAAAACTCATCTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGACGCTCTAGAATATTGATAACAAAAGGAAACACCCACACAAACTATTCGCTACAACACAGTAAACTGT AAAAAAGTGTCGCTATTTAAAAAAA ACA CCCT CCCTTTTCGTAGTGTAATAACCATGCCACCACCCCCTACCCCTGCTCCTCTTTGGCAGGGTGCATCGAGATCTGTTGATCCCTGTTAACCTCGAACCACGCGGCAACCTCCATTTGGAATTGCGTTTGCGCATGTACGTACGTTGAGTCTTACAACACTTATATAGCAATGCTTATTATACATTGTTTTTTTTTTTGTTAATAAATTAAACAGCATTAGATAAATAAGTGGTTAAGGCATGGAGCTGTTCCACACCGAAGCAAACGGACCAGGCGTACATACACACATACACAACACTCACACAACAGAC ] [+] EMBL BM618271 [ CCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGTTACCC TATATGGCCGAAACCGATGGTGTTACGGGCGAATATCATACCTTTTAAAACTCATCTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGAAGCTCTAGAATGTTGATAACAAAAGGAAACACCCACAAAAACTATTCGCTACCACACAGTAAACTGTAAAAAAAGTGTCGCTATTAAAAAAAAGCCA CCCT CCCTTTTCGTAGTGTAATAACCATGCCACCACCCCCTACCCCTGCTCCTCTTTGGCAGGGCGCATCGAGATCTCTTGATCCCTGTTAACCTCGAACCACGCGGCAACCTCCATTTGGAATTGCGTTTGCGCATGTACGTACGTTGAGTCTTACAACACTTATATAGCAATGCTTATTATACATTG TTTTTTGTTAATAAATTAAACAGCATTAGATAATTAAGTGGTTAAGGCATGGAGCTGTCCCACACCGAAGCAAACGGACCAGGCGTACATACACACATACACAACACTCACACAACAGACCACCGTGGTGGTACCGGCCCGGTGGTCCAGGCAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAAGTAACCGAGAAC] consensusID : consensus_9458#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 879 fasta sequence [CCGGCACAATTCAGCTACAATAGTGGTATTTTTACACAACTTATTTGCCTTTTTATCGTAAACGGCATGCTCTACTGCAAGCAGTAACGTCAATAATTTGAACTAAAACAATGACGAGCCCGATTTGACGTTTCTTCCCTCTCGCGCAATCTTCCTCTTTGTTGCATTCGCTCAACGTCGCAGTCGAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAATGAAGCAAACGATTTGC-AAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGA] [+] EMBL BM657290 [CCGGCACAATTCAGCTACAATAGTGGTATTTTTACACAACTTATTTGCCTTTTTATCGTAAACGGCATGCTCTACTGCAAGCAGTAACGTCAATAATTTGAACTAAAACAATGACGAGCCCGATTTGACGTTTCTTCCCTCTCGCGCAATCTTCCTCTTTGTTGCATTCGCTCAACGTCGCAGTCTAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTGGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAA ] [+] EMBL BX603165 [ TCCTCTTTGTTGCATTCGCTCAACGTCGCAGTCGAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAATGAAGCATACGATTTGCAAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAA CCA ] [+] EMBL BM607150 [ ccgTTCGCTCAACGTCGCAGTCGAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAACAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACTTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGATTTGC AAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAG ] [+] EMBL AL930247 [ ccCGAGG TGAAAAATC ATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAA ] [+] EMBL BM623817 [ ccgGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAATGAAGCAAACGATTTGC AAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGA] consensusID : consensus_9458#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 866 fasta sequence [GTGTGCGGGGCAGACGGGGCAGGTGGACGAATGGGTCACGCGTGCCAGAAGTCTGTGCCGCTTAGTACGAAAGATGCATTAACAACGTAAAGAATAGTAATGATTCGCGCTACAATTCGACATAATACCGCAAAAGATATAGAATTCTAGTAAACAAAAAAAGAGTAACCAAACACTCAAGCCAGTATGTATCTTACGTCCCACTCCTCCACCATTCTCCCGCTCCACCAGCAGAAGGGACAGCAGTCACAGACAGAGTGCTTGCTGCAGGTGCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCCATGCATTTGTGGCGTACGCAGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCGTAGTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCGATGCGGATAGGATGTTGGTATATGAGCAGAGCGAGAGAGAAATCGGCCCGAAAGAGAGTAAGATACACACGATCGAGTACGATCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGCCTGGCAATGAAGGGGGCTGGTATTATCACTTTCTTGCT-AAACAAAACTCACAACAACAACAACAAAAACATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGAATAGTACAGCATTACTATATATACATATATTCTCGAGCAAATTGCGACAACAGACAGCGAAAACGGACAAGCAGCAGGGAAGCAGATGGGACAGCGATAGATGAGAGTGGGAGTGGGGTGAAAAAAAAACAACAAAACTATACTAACGATTACATGTTTCCAATTGAATTGCAATAACAAAACTACCGTGAATGAAGTCAATAAAGTAAAAT] [+] EMBL BX627871 [GTGTGCGGGGCAGACGGGGCAGGTGGACGAATGGGTCACGCGTGCCAGAAGTCTGTGCCGCTTAGTACGAAAGATGCATTAACAACGTAAAGAATAGTAATGATTCGCGCTACAATTCGACATAATACCGCAAAAGATATAGAATTCTAGTAAACAAAAAAAGAGTAACCAAACACTCAAGCCAGTATGTATCTTACGTCCCACTCCTCCACCATTCTCCCGCTCCACCAGCAGAAGGGACAGCAGTCCCATACAGAG TGCTGAAGGTTCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCCATGCATTCGTGGCGTACGCAGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCATAGTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCTATGCGGATAAGATATTGGTATATGAGCGGAGCGAGAGAGAACTCGGCCCAAAGGAGAGTAAGATACACACGATCGAGTACGATCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGTCTGGCAATGAAGGGGGCTGGTATTATCACTTTCTTGCTAAAACAAAACTCACCACAACAACAACAAAAACATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGAATAGTACAGCATTACTATATATACATATATTCTCGAGCAAATTGCGACAACAGAC ] [+] EMBL BX611180 [ GCCAGAAGTCTGTACCGCTTAGTACGAAAGATGCATTAACAACGTAAAGAATAGTAATGATTCGCGCTACAATTCGACATAATACCGCAAAAGGTATAGAATTCTAGTAAAC AAAAAGAGTAACCAAACACTCAAGCCAGTACGTATCTTACGTCCCACTCCTCCACC TCCTCCCCCTCCACCAGCAGAAGGGACAGCAGTCACAGACAGAGTGCTTGCTGCAGGTGCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCCATGCATTTGTGGCGTACGCAGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCGTAGTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCGATGCGGATAGGATGTTGGTATATGAGCAGAGCGAGAGAGAAATCGGCCCGAAAGAGAGTAAGATACACACGATCGAGTACGATCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGCCTGGCAATTAAGGGGGCTGGTATTATCACTTTCTTGCT AAACAAAACTCACAACAACAACAACAAAAACATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGGATAGTACAGCATTACTATATATACATATATTCTCGAGCAAATTGCGACAACAGACAGCGAAAAC ] [+] EMBL BX618994 [ TCCACCAGCAGAAGGGACAGCAGTCACAGACAGAGTGCTTGCTGCAGGTGCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCCATGCATTTGTGGCGTACGCAGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCGTAGTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCGATGCGGATAGGATGTTGGTATATGAGCAGAGCGAGAGAGAAATCGGCCCGAAAGAGAGTAAGATACACACGATCGAGTACGATCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGCCTGGCAATGAAGGGGGCTGGTATTATCACTTTCTTGCT AAACAAAACTCACAACAACAACAACAAAAACATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGAATAGTACAGCATTACTATATATACATATATTCTCGAGCAAATTGCGACAACAGACAGCGAAAACGGACAAGCAGCAGGGAAGCAGATGGGACAGCGATAGATGAGAGTGGGAGTGGGGTGAAAAAAAAACAACAAAACTATACTAACGATTACATGTTTCCAATTGAATTGCAATAACAAAACTACCGTGAATGAAGTCAATAAAGTAAAAT] consensusID : consensus_9458#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 603 fasta sequence [CCAGAATCNCCACGAGNNNTGACGTACATACACACATACACANCACTCACACTAACAGACCACCGTGGTGGTAACGGGCCGGTGGTCCAGGAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAGGAAACCGAGAACTGAGCAAGCAAGTAGCTTTTTCCCGCCTCTCTGTACACGCCACATACACACACGCCCTCCCACCGGGTCACGTGGATTTGTTTGCGCTCATTGTTGTTTTGCTGCAAAAAAACACACAACACATACACACACGTATAAATATATATAGATTATGCCTGCCAGAAGAATAGCGAAACAAAAACAAAAAATCGTTCAATAGGCTAGTGAATGCGATCCTTTCGGTGTGCGGGGCAGACGGGGCACGGTGGACGAATGGGCCACGCGTGCCAGAAGTCTGTACCGCTTAGTACGAAAGATGCATTAAGCGAACGTAAAGAATAGTAATGATTCGCAGCTAACAATTCGACATAATACCGCGCAACAAGATATAGGAACTTCTAGTAAACAAGAAAACGAGACANAAAGAACGAGACNAGCAGGGCAATTGTTTAGCAGGGCCGGAAGGCATTAATTN] [+] EMBL BX467315 [CCAGAATCNCCACGAGNNNTGACGTACATACACACATACACANCACTCACACTAACAGACCACCGTGGTGGTAACGGGCCGGTGGTCCAGGAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAGGAAACCGAGAACTGAGCAAGCAAGTAGCTTTTTCCCGCCTCTCTGTACACGCCACATACACACACGCCCTCCCACCGGGTCACGTGGATTTGTTTGCGCTCATTGTTGTTTTGCTGCAAAAAAACACACAACACATACACACACGTATAAATATATATAGATTATGCCTGCCAGAAGAATAGCGAAACAAAAACAAAAAATCGTTCAATAGGCTAGTGAATGCGATCCTTTCGGTGTGCGGGGCAGACGGGGCACGGTGGACGAATGGGCCACGCGTGCCAGAAGTCTGTACCGCTTAGTACGAAAGATGCATTAAGCGAACGTAAAGAATAGTAATGATTCGCAGCTAACAATTCGACATAATACCGCGCAACAAGATATAGGAACTTCTAGTAAACAAGAAAACGAGACANAAAGAACGAGACNAGCAGGGCAATTGTTTAGCAGGGCCGGAAGGCATTAATTN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9458#0 ------------------------------------------------------------ consensus_9458#1 CCGGCACAATTCAGCTACAATAGTGGTATTTTTACACAACTTATTTGCCTTTTTATCGTA 60 consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 ------------------------------------------------------------ consensus_9458#1 AACGGCATGCTCTACTGCAAGCAGTAACGTCAATAATTTGAACTAAAACAATGACGAGCC 120 consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 ------------------------------------------------------------ consensus_9458#1 CGATTTGACGTTTCTTCCCTCTCGCGCAATCTTCCTCTTTGTTGCATTCGCTCAACGTCG 180 consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 ------------------------ACCCACGCGTCCGCTCTCGTTCAAAGTCGAGATCGC 36 consensus_9458#1 CAGTCGAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGC 240 consensus_9458#3 --------------------------------------------------CCAGAATCNC 10 consensus_9458#2 -----------------------------------------GTGTGCGGGGCAGACGGGG 19 * consensus_9458#0 CAGGGGAACAAATCAG-CAGAAAGAA-AGCGCTGTGTTGTGTGTGAGATATTGTGC-AGC 93 consensus_9458#1 CAGGGGAACAAATCAG-CAGAAAGAA-AGCGCTGTGTTGTGTGTGAGATATTGTGC-AGC 297 consensus_9458#3 CACGAGNNNTGACGTA-CATACACAC-A----TACACANCACTCACACTAACAGAC-CAC 63 consensus_9458#2 CAGGTGGACGAATGGGTCACGCGTGCCAGAAGTCTGTGCCGCTTAGTACGAAAGATGCAT 79 ** * * * ** * * consensus_9458#0 ATTGTTAGCATTAACT--TAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGAC 151 consensus_9458#1 ATTGTTAGCATTAACG--TAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGAC 355 consensus_9458#3 CGTGGTGGTAACGGGC--CGGTGGTCCAGG-----AACGGATTGCAAT----TGAGTGA- 111 consensus_9458#2 TAACAACGTAAAGAATAGTAATGATTCGCGCTA-CAATTCGACATAATACCGCAAAAGAT 138 * * * * * * ** * ** consensus_9458#0 AACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCC--- 208 consensus_9458#1 AACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCC--- 412 consensus_9458#3 AATTAGCTGGAAG-ATCGTGGCCA---GAGGAAACCGAGAACTGAGCAAGCAAGT----- 162 consensus_9458#2 ATAGAATTCTAGTAAACAAAAAAA---GAGTAACCAAACACTCAAGCCAGTATGTATCTT 195 * * * * * ** * * * * * ** consensus_9458#0 AAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAA 268 consensus_9458#1 AAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAA 472 consensus_9458#3 -AGCTTTTTCCCGCCTCTCTGTACACGCCACATACACACACGCCCTCCCACCGGGTCACG 221 consensus_9458#2 ACGTCCCACTCCTCCACCATTCTCCCGCTCCACCAGCAGAAGGGACAGCAGTCACAGACA 255 * * * * * * * * * consensus_9458#0 TGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGAT-C 327 consensus_9458#1 TGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGAT-C 531 consensus_9458#3 TGG-ATTTGTTTGCGCTCATTGTTGTTTTGCTG-CAAAAAAACACA--CAACACATA--C 275 consensus_9458#2 GAGTGCTTGCT-GCAGGTGCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCC 314 * ** * * * * * * ** * * consensus_9458#0 GGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCAC 387 consensus_9458#1 GGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCAC 591 consensus_9458#3 ACACACGTATAAAT------ATATATAGATTATGCCTGCCAGAAGA-ATAGCGAAAC--- 325 consensus_9458#2 ATGCATTTGTGGCGTACGC-AGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCGTA 373 * * * * ** * * consensus_9458#0 CAACTACGTGGACGCATCGAACTGCTACAAGAAGACCGACCCAAATGAAGCGGTCAACTG 447 consensus_9458#1 CAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTG 651 consensus_9458#3 -AAAAACAAAAAATCGTTCAATAGGC-TAGTGAATGCGATCCTTTCGGTGTGCGGGGCAG 383 consensus_9458#2 GTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCGATGCGGATAGGATGTTGGTATA 433 ** * * *** * * consensus_9458#0 TCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCA 507 consensus_9458#1 TCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCA 711 consensus_9458#3 ---ACGGGGCACGGTGGACGAATGGGCC-ACGCGTGCCAGAAGTCTGTA-CCGCTTAGTA 438 consensus_9458#2 TGAGCAGAGCGAGAGAGAAATCGGCCCGAAAGAGAGTAAGATACACACGATCGAGTACGA 493 * * ** * * * * * * * * consensus_9458#0 TCATC--AGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGAT-----TTGCAAAGGG 560 consensus_9458#1 TCATC--AGAGCATTGCGGAAATGTACGAAAATGAAGCAAACGAT-----TTGCAAAGGG 764 consensus_9458#3 CGAAA--GATGCATT----AAGCGAACGTAAAGAATAGTAATGAT-----TCGCAGCTAA 487 consensus_9458#2 TCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGCCTGGCAATGAA 553 * * ** ** * * ** * *** consensus_9458#0 CGGTGC-AGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAA--TCCACCAGCT 617 consensus_9458#1 CGGTGC-AGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAA--TCCACCAGCT 821 consensus_9458#3 CAATTC-GACATAAT-ACCGCGCAACAAGATATAGGAACTTCTAGTAA--ACAAGAAAAC 543 consensus_9458#2 GGGGGCTGGTATTATCACTTTCTTGCTAAACA---AAACTCACAACAACAACAACAAAAA 610 * * * * * * ** * ** * * * consensus_9458#0 CGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGG-AGGACTACGAG 676 consensus_9458#1 CGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGG-AGGACTACGA- 879 consensus_9458#3 GAGACANAAAGAACGAGACNAGCAGGGCA-ATTGTTTAGCAGGGCCGG-AAGGCATTAAT 601 consensus_9458#2 CATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGAATAGTACAGCATTACT 670 ** ** * * * * * * * consensus_9458#0 AAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAG 736 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 TN---------------------------------------------------------- 603 consensus_9458#2 ATATATACATATATTCTCGAGCAAATTGCGACAACAGACAGCGAAAACGGACAAGCAGCA 730 consensus_9458#0 TACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCACCTGAGCGTGGATCTGCTG 796 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 GGGAA-GCAGATGGGACAGCGATAGATGAGAGTGGGAGTGGGGTGAAAAAAAAACAACAA 789 consensus_9458#0 AACGCTCAGCACGCGATGGAGAAATACGCACAACAGTACCCGGCATTCCAGGACTCGCGA 856 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 AACTATACTAACGATTACATGTTTCCAATTGAATTGCAATAACAAAACTACCGTGAATGA 849 consensus_9458#0 GAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTC 916 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 AGTCAATAAAGTAAAAT------------------------------------------- 866 consensus_9458#0 ACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATC 976 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 CTGTTGCGAATCAAGAAGCAGGCCAACGACAATCCGGATCTGCGATAAGCAGCTCGCCAC 1036 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 CAAGAATATCTATCACAATCCGCTCGTTTTGGTCTATTTGTGCGCGCCTCCTCCCCTTCC 1096 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 AGGCGGCATTATAATCACACGTACATACACACGGACATACACAAACCAAGACCTGTTTGT 1156 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 TTAAGTTTTTAAACTGTTGTGTTTTACGGTTCGAAACTATTGTTTTTTCGCGGGCGAGTT 1216 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 GTGTCCGCGCACCGAACCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGT 1276 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 TACCCTATATGGCCGAAACCGATGGTGTTACGGGCGAATATCATACCTTTTAAAACTCAT 1336 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 CTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGAAGCTCTA 1396 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 GAATGTTGATAACAAAAGGAAACACCCACAAAAACTATTCGCTACCACACAGTAAACTGT 1456 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 AAAAAAAGTGTCGCTATTAAAAAAAAGCCACCCTCCCTTTTCGTAGTGTAATAACCATGC 1516 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 CACCACCCCCTACCCCTGCTCCTCTTTGGCAGGGCGCATCGAGATCTCTTGATCCCTGTT 1576 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 AACCTCGAACCACGCGGCAACCTCCATTTGGAATTGCGTTTGCGCATGTACGTACGTTGA 1636 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 GTCTTACAACACTTATATAGCAATGCTTATTATACATTGTTTTTTGTTAATAAATTAAAC 1696 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 AGCATTAGATAAATAAGTGGTTAAGGCATGGAGCTGTTCCACACCGAAGCAAACGGACCA 1756 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 GGCGTACATACACACATACACAACACTCACACAACAGACCACCGTGGTGGTACCGGCCCG 1816 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 GTGGTCCAGGCAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAAGTA 1876 consensus_9458#1 ------------------------------------------------------------ consensus_9458#3 ------------------------------------------------------------ consensus_9458#2 ------------------------------------------------------------ consensus_9458#0 ACCGAGAAC 1885 consensus_9458#1 --------- consensus_9458#3 --------- consensus_9458#2 --------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||