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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9458#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1885 fasta sequence
[ACCCACGCGTCCGCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACTTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAGACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGATTTGCAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAGTACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCA-CCTGAGCGTGGATCTGCTGAACGCTCAGCACGCGATGGAGAAATACGCACAACAGTACCCGGCATTCCAGGACTCGCGAGAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTCACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATCCTGTTGCGAATCAAGAAGCAGGCCAACGACAATCCGGATCTGCGATAAGCAGCTCGCCACCAAGAATATCTATCACAATCCGCTCGTTTTGGTCTATTTGTGCGCGCCTCCTCCCCTTCCAGGCGGCATTATAATCACACGTACATACACACGGACATACACAAACCAAGACCTGTTTGTTTAAGTTTTTAAACTGTTGTGTTTTACGGTTCGAAACTATTGTTTTTTCGCGGGCGAGTTGTGTCCGCGCACCGAACCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGTTACCC-TATATGGCCGAAACCGATGGTGTTACGGGCGAATATCATACCTTTTAAAACTCATCTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGAAGCTCTAGAATGTTGATAACAAAAGGAAACACCCACAAAAACTATTCGCTACCACACAGTAAACTGTAAAAAAAGTGTCGCTATTAAAAAAAAGCCA-CCCT-CCCTTTTCGTAGTGTAATAACCATGCCACCACCCCCTACCCCTGCTCCTCTTTGGCAGGGCGCATCGAGATCTCTTGATCCCTGTTAACCTCGAACCACGCGGCAACCTCCATTTGGAATTGCGTTTGCGCATGTACGTACGTTGAGTCTTACAACACTTATATAGCAATGCTTATTATACATTG-----TTTTTTGTTAATAAATTAAACAGCATTAGATAAATAAGTGGTTAAGGCATGGAGCTGTTCCACACCGAAGCAAACGGACCAGGCGTACATACACACATACACAACACTCACACAACAGACCACCGTGGTGGTACCGGCCCGGTGGTCCAGGCAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAAGTAACCGAGAAC]
[+] EMBL BM599942 [ACCCACGCGTCCGCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTGGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAGACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAA ]
[+] EMBL BM624650 [ cCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACTTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGATTTGCAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAAGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCG ]
[+] EMBL BM581114 [ ccGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACTTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAACAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCAGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGATTTGCAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAGTACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCATCTTGAGCGTGGATCTGCTGAACGCTCAGCA ]
[+] EMBL BM577146 [ ccgGTGGACGCATCGAACTGCTACAAGAAGACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAATGAAGCAAACGATTTGCAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAGTACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCA CCTGAGCGTGGATCTGCTGAACGCTCAGCACGCGATGGAGAAATACGCACAACAGTACCCGGCATTCCAGGACTCGCGAGAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTCACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATCCTGTTGCGAATCAAGAAGCAGGCCAACGACAATCCGGATCTGCGATAAGCAGCTCGCCACCAAGAATATCTAT ]
[+] EMBL BM626546 [ ccgGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGAGAAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAGTACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCA TCTGAGCGTGGATCTGCTGAACGCTCAGCACGCGATGGAGAAATACGCACAACAGTACCCGGCATTCCAGGACTCGCGAGAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTCACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATCCTGTTGCGAATCAAGAAGCAGGCCAACG ]
[+] EMBL BM617806 [ ccgCGCACAACAGTACCCGGCATTCCAGGACTCGCGAGAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTCACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATCCTGTTGCGAATCAAGAAGCAGGCCAACGACAATCCGGATCTGCGATAAGCAGCTCGCCACCAAGAATATCTATCACAATCCGCTCGTTTTGGTCTATTTGTGCGCGCCTCCTCCCCTTCCAGGCGGCATTATAATCACACGTACATACACACGGACATACACAAACCAAGACCTGTTTGTTTAAGTTTTTAAACTGTTGTGTTTTACGGTTCGAAACTATTGTTTTTTCGCGGGCGAGTTGTGTCCGCGCACCGAACCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGTTACCC TATATGGCCGAAACCGATGGTGTTACGGGCGAATATCATACCTTTTAAAACTCATCTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGAAGCTCTAGAATGTTGATAACAAAAGGAAACACCCACAAAAACTATTCGCTACCACACAGTAAACTGTAAAAAAAGTGTCGCTATTAAAAAAAAGCCACCCCTCCCCTTTTCGTAGGGTAATAACCATGGCACCACCCCCTACCCCTGCTCCTCTTTGGGAGGGCGCATCGAGATCTCTTGATCCCTGGTAACCTCGAACCAC ]
[+] EMBL BX617757 [ GAACCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGTTACCCAAATACAGCCGAAACCGATGGTGGTACGGGCGTATATCATACCTTTTAAAACTCATCTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGACGCTCTAGAATATTGATAACAAAAGGAAACACCCACACAAACTATTCGCTACAACACAGTAAACTGT AAAAAAGTGTCGCTATTTAAAAAAA ACA CCCT CCCTTTTCGTAGTGTAATAACCATGCCACCACCCCCTACCCCTGCTCCTCTTTGGCAGGGTGCATCGAGATCTGTTGATCCCTGTTAACCTCGAACCACGCGGCAACCTCCATTTGGAATTGCGTTTGCGCATGTACGTACGTTGAGTCTTACAACACTTATATAGCAATGCTTATTATACATTGTTTTTTTTTTTGTTAATAAATTAAACAGCATTAGATAAATAAGTGGTTAAGGCATGGAGCTGTTCCACACCGAAGCAAACGGACCAGGCGTACATACACACATACACAACACTCACACAACAGAC ]
[+] EMBL BM618271 [ CCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGTTACCC TATATGGCCGAAACCGATGGTGTTACGGGCGAATATCATACCTTTTAAAACTCATCTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGAAGCTCTAGAATGTTGATAACAAAAGGAAACACCCACAAAAACTATTCGCTACCACACAGTAAACTGTAAAAAAAGTGTCGCTATTAAAAAAAAGCCA CCCT CCCTTTTCGTAGTGTAATAACCATGCCACCACCCCCTACCCCTGCTCCTCTTTGGCAGGGCGCATCGAGATCTCTTGATCCCTGTTAACCTCGAACCACGCGGCAACCTCCATTTGGAATTGCGTTTGCGCATGTACGTACGTTGAGTCTTACAACACTTATATAGCAATGCTTATTATACATTG TTTTTTGTTAATAAATTAAACAGCATTAGATAATTAAGTGGTTAAGGCATGGAGCTGTCCCACACCGAAGCAAACGGACCAGGCGTACATACACACATACACAACACTCACACAACAGACCACCGTGGTGGTACCGGCCCGGTGGTCCAGGCAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAAGTAACCGAGAAC]
consensusID : consensus_9458#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 879 fasta sequence
[CCGGCACAATTCAGCTACAATAGTGGTATTTTTACACAACTTATTTGCCTTTTTATCGTAAACGGCATGCTCTACTGCAAGCAGTAACGTCAATAATTTGAACTAAAACAATGACGAGCCCGATTTGACGTTTCTTCCCTCTCGCGCAATCTTCCTCTTTGTTGCATTCGCTCAACGTCGCAGTCGAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAATGAAGCAAACGATTTGC-AAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGA]
[+] EMBL BM657290 [CCGGCACAATTCAGCTACAATAGTGGTATTTTTACACAACTTATTTGCCTTTTTATCGTAAACGGCATGCTCTACTGCAAGCAGTAACGTCAATAATTTGAACTAAAACAATGACGAGCCCGATTTGACGTTTCTTCCCTCTCGCGCAATCTTCCTCTTTGTTGCATTCGCTCAACGTCGCAGTCTAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTGGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAA ]
[+] EMBL BX603165 [ TCCTCTTTGTTGCATTCGCTCAACGTCGCAGTCGAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAATGAAGCATACGATTTGCAAAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAA CCA ]
[+] EMBL BM607150 [ ccgTTCGCTCAACGTCGCAGTCGAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAACAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACTTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGATTTGC AAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAG ]
[+] EMBL AL930247 [ ccCGAGG TGAAAAATC ATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAA ]
[+] EMBL BM623817 [ ccgGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGCCAGGGGAACAAATCAGCAGAAAGAAAGCGCTGTGTTGTGTGTGAGATATTGTGCAGCATTGTTAGCATTAACGTAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGACAACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCCAAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAATGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGATCGGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCACCAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTGTCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCATCATCAGAGCATTGCGGAAATGTACGAAAATGAAGCAAACGATTTGC AAAGGGCGGTGCAGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAATCCACCAGCTCGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGGAGGACTACGA]
consensusID : consensus_9458#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 866 fasta sequence
[GTGTGCGGGGCAGACGGGGCAGGTGGACGAATGGGTCACGCGTGCCAGAAGTCTGTGCCGCTTAGTACGAAAGATGCATTAACAACGTAAAGAATAGTAATGATTCGCGCTACAATTCGACATAATACCGCAAAAGATATAGAATTCTAGTAAACAAAAAAAGAGTAACCAAACACTCAAGCCAGTATGTATCTTACGTCCCACTCCTCCACCATTCTCCCGCTCCACCAGCAGAAGGGACAGCAGTCACAGACAGAGTGCTTGCTGCAGGTGCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCCATGCATTTGTGGCGTACGCAGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCGTAGTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCGATGCGGATAGGATGTTGGTATATGAGCAGAGCGAGAGAGAAATCGGCCCGAAAGAGAGTAAGATACACACGATCGAGTACGATCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGCCTGGCAATGAAGGGGGCTGGTATTATCACTTTCTTGCT-AAACAAAACTCACAACAACAACAACAAAAACATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGAATAGTACAGCATTACTATATATACATATATTCTCGAGCAAATTGCGACAACAGACAGCGAAAACGGACAAGCAGCAGGGAAGCAGATGGGACAGCGATAGATGAGAGTGGGAGTGGGGTGAAAAAAAAACAACAAAACTATACTAACGATTACATGTTTCCAATTGAATTGCAATAACAAAACTACCGTGAATGAAGTCAATAAAGTAAAAT]
[+] EMBL BX627871 [GTGTGCGGGGCAGACGGGGCAGGTGGACGAATGGGTCACGCGTGCCAGAAGTCTGTGCCGCTTAGTACGAAAGATGCATTAACAACGTAAAGAATAGTAATGATTCGCGCTACAATTCGACATAATACCGCAAAAGATATAGAATTCTAGTAAACAAAAAAAGAGTAACCAAACACTCAAGCCAGTATGTATCTTACGTCCCACTCCTCCACCATTCTCCCGCTCCACCAGCAGAAGGGACAGCAGTCCCATACAGAG TGCTGAAGGTTCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCCATGCATTCGTGGCGTACGCAGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCATAGTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCTATGCGGATAAGATATTGGTATATGAGCGGAGCGAGAGAGAACTCGGCCCAAAGGAGAGTAAGATACACACGATCGAGTACGATCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGTCTGGCAATGAAGGGGGCTGGTATTATCACTTTCTTGCTAAAACAAAACTCACCACAACAACAACAAAAACATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGAATAGTACAGCATTACTATATATACATATATTCTCGAGCAAATTGCGACAACAGAC ]
[+] EMBL BX611180 [ GCCAGAAGTCTGTACCGCTTAGTACGAAAGATGCATTAACAACGTAAAGAATAGTAATGATTCGCGCTACAATTCGACATAATACCGCAAAAGGTATAGAATTCTAGTAAAC AAAAAGAGTAACCAAACACTCAAGCCAGTACGTATCTTACGTCCCACTCCTCCACC TCCTCCCCCTCCACCAGCAGAAGGGACAGCAGTCACAGACAGAGTGCTTGCTGCAGGTGCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCCATGCATTTGTGGCGTACGCAGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCGTAGTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCGATGCGGATAGGATGTTGGTATATGAGCAGAGCGAGAGAGAAATCGGCCCGAAAGAGAGTAAGATACACACGATCGAGTACGATCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGCCTGGCAATTAAGGGGGCTGGTATTATCACTTTCTTGCT AAACAAAACTCACAACAACAACAACAAAAACATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGGATAGTACAGCATTACTATATATACATATATTCTCGAGCAAATTGCGACAACAGACAGCGAAAAC ]
[+] EMBL BX618994 [ TCCACCAGCAGAAGGGACAGCAGTCACAGACAGAGTGCTTGCTGCAGGTGCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCCATGCATTTGTGGCGTACGCAGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCGTAGTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCGATGCGGATAGGATGTTGGTATATGAGCAGAGCGAGAGAGAAATCGGCCCGAAAGAGAGTAAGATACACACGATCGAGTACGATCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGCCTGGCAATGAAGGGGGCTGGTATTATCACTTTCTTGCT AAACAAAACTCACAACAACAACAACAAAAACATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGAATAGTACAGCATTACTATATATACATATATTCTCGAGCAAATTGCGACAACAGACAGCGAAAACGGACAAGCAGCAGGGAAGCAGATGGGACAGCGATAGATGAGAGTGGGAGTGGGGTGAAAAAAAAACAACAAAACTATACTAACGATTACATGTTTCCAATTGAATTGCAATAACAAAACTACCGTGAATGAAGTCAATAAAGTAAAAT]
consensusID : consensus_9458#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 603 fasta sequence
[CCAGAATCNCCACGAGNNNTGACGTACATACACACATACACANCACTCACACTAACAGACCACCGTGGTGGTAACGGGCCGGTGGTCCAGGAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAGGAAACCGAGAACTGAGCAAGCAAGTAGCTTTTTCCCGCCTCTCTGTACACGCCACATACACACACGCCCTCCCACCGGGTCACGTGGATTTGTTTGCGCTCATTGTTGTTTTGCTGCAAAAAAACACACAACACATACACACACGTATAAATATATATAGATTATGCCTGCCAGAAGAATAGCGAAACAAAAACAAAAAATCGTTCAATAGGCTAGTGAATGCGATCCTTTCGGTGTGCGGGGCAGACGGGGCACGGTGGACGAATGGGCCACGCGTGCCAGAAGTCTGTACCGCTTAGTACGAAAGATGCATTAAGCGAACGTAAAGAATAGTAATGATTCGCAGCTAACAATTCGACATAATACCGCGCAACAAGATATAGGAACTTCTAGTAAACAAGAAAACGAGACANAAAGAACGAGACNAGCAGGGCAATTGTTTAGCAGGGCCGGAAGGCATTAATTN]
[+] EMBL BX467315 [CCAGAATCNCCACGAGNNNTGACGTACATACACACATACACANCACTCACACTAACAGACCACCGTGGTGGTAACGGGCCGGTGGTCCAGGAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAGGAAACCGAGAACTGAGCAAGCAAGTAGCTTTTTCCCGCCTCTCTGTACACGCCACATACACACACGCCCTCCCACCGGGTCACGTGGATTTGTTTGCGCTCATTGTTGTTTTGCTGCAAAAAAACACACAACACATACACACACGTATAAATATATATAGATTATGCCTGCCAGAAGAATAGCGAAACAAAAACAAAAAATCGTTCAATAGGCTAGTGAATGCGATCCTTTCGGTGTGCGGGGCAGACGGGGCACGGTGGACGAATGGGCCACGCGTGCCAGAAGTCTGTACCGCTTAGTACGAAAGATGCATTAAGCGAACGTAAAGAATAGTAATGATTCGCAGCTAACAATTCGACATAATACCGCGCAACAAGATATAGGAACTTCTAGTAAACAAGAAAACGAGACANAAAGAACGAGACNAGCAGGGCAATTGTTTAGCAGGGCCGGAAGGCATTAATTN]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9458#0 ------------------------------------------------------------
consensus_9458#1 CCGGCACAATTCAGCTACAATAGTGGTATTTTTACACAACTTATTTGCCTTTTTATCGTA 60
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 ------------------------------------------------------------
consensus_9458#1 AACGGCATGCTCTACTGCAAGCAGTAACGTCAATAATTTGAACTAAAACAATGACGAGCC 120
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 ------------------------------------------------------------
consensus_9458#1 CGATTTGACGTTTCTTCCCTCTCGCGCAATCTTCCTCTTTGTTGCATTCGCTCAACGTCG 180
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 ------------------------ACCCACGCGTCCGCTCTCGTTCAAAGTCGAGATCGC 36
consensus_9458#1 CAGTCGAGGAATGAAAAATCAATAATACAGCTTTGCTCTCTCGTTCAAAGTCGAGATCGC 240
consensus_9458#3 --------------------------------------------------CCAGAATCNC 10
consensus_9458#2 -----------------------------------------GTGTGCGGGGCAGACGGGG 19
*
consensus_9458#0 CAGGGGAACAAATCAG-CAGAAAGAA-AGCGCTGTGTTGTGTGTGAGATATTGTGC-AGC 93
consensus_9458#1 CAGGGGAACAAATCAG-CAGAAAGAA-AGCGCTGTGTTGTGTGTGAGATATTGTGC-AGC 297
consensus_9458#3 CACGAGNNNTGACGTA-CATACACAC-A----TACACANCACTCACACTAACAGAC-CAC 63
consensus_9458#2 CAGGTGGACGAATGGGTCACGCGTGCCAGAAGTCTGTGCCGCTTAGTACGAAAGATGCAT 79
** * * * ** * *
consensus_9458#0 ATTGTTAGCATTAACT--TAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGAC 151
consensus_9458#1 ATTGTTAGCATTAACG--TAATTGTTCCAGCAAACAACAGCGCGCGACACCATGGCCGAC 355
consensus_9458#3 CGTGGTGGTAACGGGC--CGGTGGTCCAGG-----AACGGATTGCAAT----TGAGTGA- 111
consensus_9458#2 TAACAACGTAAAGAATAGTAATGATTCGCGCTA-CAATTCGACATAATACCGCAAAAGAT 138
* * * * * * ** * **
consensus_9458#0 AACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCC--- 208
consensus_9458#1 AACGAGCAGAAAGCGATGCAGCTGATTGCGGAAGCGGAGAAAAAACTGAACTCGTCC--- 412
consensus_9458#3 AATTAGCTGGAAG-ATCGTGGCCA---GAGGAAACCGAGAACTGAGCAAGCAAGT----- 162
consensus_9458#2 ATAGAATTCTAGTAAACAAAAAAA---GAGTAACCAAACACTCAAGCCAGTATGTATCTT 195
* * * * * ** * * * * * **
consensus_9458#0 AAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCAAACAAGGTCGAGGAGGCCGTAGAA 268
consensus_9458#1 AAAAGTTTCTTCGGCTCGCTATTCGGTGGCGGCTCGAACAAGGTCGAGGAGGCGGTAGAA 472
consensus_9458#3 -AGCTTTTTCCCGCCTCTCTGTACACGCCACATACACACACGCCCTCCCACCGGGTCACG 221
consensus_9458#2 ACGTCCCACTCCTCCACCATTCTCCCGCTCCACCAGCAGAAGGGACAGCAGTCACAGACA 255
* * * * * * * * *
consensus_9458#0 TGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGAT-C 327
consensus_9458#1 TGTTACCAGCGGGCGGCAAATATGTTTAAGATGGCTAAGAAATGGAGCCAGGCCGGAT-C 531
consensus_9458#3 TGG-ATTTGTTTGCGCTCATTGTTGTTTTGCTG-CAAAAAAACACA--CAACACATA--C 275
consensus_9458#2 GAGTGCTTGCT-GCAGGTGCAGTGGATCAGTGGACACATTGTTGCTACCAAAATCTACCC 314
* ** * * * * * * ** * *
consensus_9458#0 GGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCAC 387
consensus_9458#1 GGCCTTCTGTGAGGCGGCCAACCTGCACGCCAAGGCGGGCAGCCGACACGACGCGGCCAC 591
consensus_9458#3 ACACACGTATAAAT------ATATATAGATTATGCCTGCCAGAAGA-ATAGCGAAAC--- 325
consensus_9458#2 ATGCATTTGTGGCGTACGC-AGGCTCGTGTGCAAATGTTTAGATCCCTTAGCCACGCGTA 373
* * * * ** * *
consensus_9458#0 CAACTACGTGGACGCATCGAACTGCTACAAGAAGACCGACCCAAATGAAGCGGTCAACTG 447
consensus_9458#1 CAACTACGTGGACGCATCGAACTGCTACAAGAAAACCGACCCAAATGAAGCGGTCAACTG 651
consensus_9458#3 -AAAAACAAAAAATCGTTCAATAGGC-TAGTGAATGCGATCCTTTCGGTGTGCGGGGCAG 383
consensus_9458#2 GTTAAACCAGACCGCGCCCCGAATCCCTACCACGTGCGATGCGGATAGGATGTTGGTATA 433
** * * *** * *
consensus_9458#0 TCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCA 507
consensus_9458#1 TCTGCTGAAGGCAATCGACATTTACACCGATATGGGCCGGTTCACGATGGCTGCGAAGCA 711
consensus_9458#3 ---ACGGGGCACGGTGGACGAATGGGCC-ACGCGTGCCAGAAGTCTGTA-CCGCTTAGTA 438
consensus_9458#2 TGAGCAGAGCGAGAGAGAAATCGGCCCGAAAGAGAGTAAGATACACACGATCGAGTACGA 493
* * ** * * * * * * * *
consensus_9458#0 TCATC--AGAGCATTGCGGAAATGTACGAAAACGAAGCAAACGAT-----TTGCAAAGGG 560
consensus_9458#1 TCATC--AGAGCATTGCGGAAATGTACGAAAATGAAGCAAACGAT-----TTGCAAAGGG 764
consensus_9458#3 CGAAA--GATGCATT----AAGCGAACGTAAAGAATAGTAATGAT-----TCGCAGCTAA 487
consensus_9458#2 TCGAGCGAAATTAATAGCACCACTAGCGAAACCCACAGTTAAAATGGGCCTGGCAATGAA 553
* * ** ** * * ** * ***
consensus_9458#0 CGGTGC-AGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAA--TCCACCAGCT 617
consensus_9458#1 CGGTGC-AGCACTACGAACAGGCGGCCGATTATTTCAAGGGCGAAGAA--TCCACCAGCT 821
consensus_9458#3 CAATTC-GACATAAT-ACCGCGCAACAAGATATAGGAACTTCTAGTAA--ACAAGAAAAC 543
consensus_9458#2 GGGGGCTGGTATTATCACTTTCTTGCTAAACA---AAACTCACAACAACAACAACAAAAA 610
* * * * * * ** * ** * * *
consensus_9458#0 CGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGG-AGGACTACGAG 676
consensus_9458#1 CGGCCAACAAGTGCATGCTGAAGGTGGCCCAGTACGCGGCCCAGCTGG-AGGACTACGA- 879
consensus_9458#3 GAGACANAAAGAACGAGACNAGCAGGGCA-ATTGTTTAGCAGGGCCGG-AAGGCATTAAT 601
consensus_9458#2 CATACATTAAATCTATTATTAATGTACACGAATATGGGGAGGGAATAGTACAGCATTACT 670
** ** * * * * * * *
consensus_9458#0 AAAGCGATACAGATCTACGAGCAGGTGGCCGGCTCGTGCCTCGACAGCTCGCTGCTGAAG 736
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 TN---------------------------------------------------------- 603
consensus_9458#2 ATATATACATATATTCTCGAGCAAATTGCGACAACAGACAGCGAAAACGGACAAGCAGCA 730
consensus_9458#0 TACAGCGCCAAAGAGTACTTCTTCCGTGCGGCCCTGTGCCACCTGAGCGTGGATCTGCTG 796
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 GGGAA-GCAGATGGGACAGCGATAGATGAGAGTGGGAGTGGGGTGAAAAAAAAACAACAA 789
consensus_9458#0 AACGCTCAGCACGCGATGGAGAAATACGCACAACAGTACCCGGCATTCCAGGACTCGCGA 856
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 AACTATACTAACGATTACATGTTTCCAATTGAATTGCAATAACAAAACTACCGTGAATGA 849
consensus_9458#0 GAGTACAAGCTAGTGAAGACGCTGTGCGAACATTTGGAGGAACAAAACGTGGATGGGTTC 916
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 AGTCAATAAAGTAAAAT------------------------------------------- 866
consensus_9458#0 ACTGAAGCGGTCAAGGAGTACGACAGCATCTCCAGGCTGGACCAGTGGTACACCACGATC 976
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 CTGTTGCGAATCAAGAAGCAGGCCAACGACAATCCGGATCTGCGATAAGCAGCTCGCCAC 1036
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 CAAGAATATCTATCACAATCCGCTCGTTTTGGTCTATTTGTGCGCGCCTCCTCCCCTTCC 1096
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 AGGCGGCATTATAATCACACGTACATACACACGGACATACACAAACCAAGACCTGTTTGT 1156
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 TTAAGTTTTTAAACTGTTGTGTTTTACGGTTCGAAACTATTGTTTTTTCGCGGGCGAGTT 1216
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 GTGTCCGCGCACCGAACCGATTAAATGCATGACACTCTTCACTCTGTCGTTTCGTGCGGT 1276
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 TACCCTATATGGCCGAAACCGATGGTGTTACGGGCGAATATCATACCTTTTAAAACTCAT 1336
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 CTATCCCACTGGAATTAATGGAAAACGTAAGCCACAATTTTATCGTCTCTAGAAGCTCTA 1396
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 GAATGTTGATAACAAAAGGAAACACCCACAAAAACTATTCGCTACCACACAGTAAACTGT 1456
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 AAAAAAAGTGTCGCTATTAAAAAAAAGCCACCCTCCCTTTTCGTAGTGTAATAACCATGC 1516
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 CACCACCCCCTACCCCTGCTCCTCTTTGGCAGGGCGCATCGAGATCTCTTGATCCCTGTT 1576
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 AACCTCGAACCACGCGGCAACCTCCATTTGGAATTGCGTTTGCGCATGTACGTACGTTGA 1636
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 GTCTTACAACACTTATATAGCAATGCTTATTATACATTGTTTTTTGTTAATAAATTAAAC 1696
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 AGCATTAGATAAATAAGTGGTTAAGGCATGGAGCTGTTCCACACCGAAGCAAACGGACCA 1756
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 GGCGTACATACACACATACACAACACTCACACAACAGACCACCGTGGTGGTACCGGCCCG 1816
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 GTGGTCCAGGCAACGGATTGCAATTGAGTGAAATTAGCTGGAAGATCGTGGCCAGAAGTA 1876
consensus_9458#1 ------------------------------------------------------------
consensus_9458#3 ------------------------------------------------------------
consensus_9458#2 ------------------------------------------------------------
consensus_9458#0 ACCGAGAAC 1885
consensus_9458#1 ---------
consensus_9458#3 ---------
consensus_9458#2 ---------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||