These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9470#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1360 fasta sequence [GGCAAGAATCCCGACGAGNGTAAGACAGAAGAAACATCCCAGTGGCGCCCTATCGAAAAGGCGTAAGATAGACGTAAAGTTTTGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGGTACTGCTGGGTTTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTC-GCGGCGCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAA-AAGCAGAAGGGCAA-CCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGC-TGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCCAACGAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCACTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGTGCCAAACAGCGCCAAATACTGGACTATACACCCGAAAACGTGCGCAAGTACACGTTGCGAACCCAACCCCCGGAAGGCCAGCATCAACACGGGCAGCAGGCATCGCAGCTGGACCGTAACCGTGCGGACTTGGTCGAGGGAACCGGATAGCAGCAGCAGCCGCAGTACTCGGTGTGATATCTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCA-TTTTTTATGAAACACTCCAAATTAATTGAACTAAGTTAATGTAGAGCGATACTAGAGAAGAGTACCACTACCCTCTTCAAGAATAAACTTTCTTTTATTTCATACTT] [+] EMBL BX469214 [GGCAAGAATCCCGACGAGNGTAAGACAGAAGAAACATCCCAGTGGCGCCCTATCGAAAAGGCGTAAGATAGACGTAAAGTTTTGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGGTACTGCTGGGTTTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCAGCGGCGCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAAGAAGCAGAAGGGCAAGCCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTNCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCGTGGGGCCATCG ] [+] EMBL BX626226 [ CCAGTGGCGCCCTATCNAAAAGGCGTAAGATAGACGTAAAGTTTTGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGGTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTC GCGGCGCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAA AAGCAGAAGGGCAA CCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGC TGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGANGACATTGTTCTTCGCTTTCTGCNAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTA ] [+] EMBL BM654040 [ cgtccGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAA AAGCAGAAGGGCAA CCCATACAAGAGCATCAGCTGCCC CAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGC TGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCCAACGAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCACTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACC ] [+] EMBL BX611878 [ TCTATTGGTCTGCCATCACCTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCCAACGAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCACTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGTGCCAAACAGCGCCAAATACTGGACTATACACCCG ] [+] EMBL BX612041 [ ACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCCAACGAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCACTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGTGCCAAACAGCGCCAAATACTGGACTATACACCCGAAAACGTGCGCAAGTACACGTTGCGAACCCAACCCCCGGAAGGCCAGCATCAACACGGGCAGCAGGCATCGCAGCTGGACCGTAACCGTGCGGACTTGGTCGAGGGAACCGGATAGCAGCAGCAGCCGCAGTACTCGGTGTGATATCTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCATTTTTTTATGAAACACTCCAAATTAATT ] [-] EMBL CNS09G53 [ TCCACCGTCGTCGGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTTGTGTTCGTTGCGGACAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGTGCCAAACAGCGCCAAATACTGGACTATACACCCGAAAACGTGCGCAAGTACACGTTGCGAACCCAACCCCCGGAAGGCCAGCATCAACACGGGCAGCAGGCATCGCAGCTGGACCGTAACCGTGCGGACTTGGTCGAGGGAACCGGATAGCAGCAGCAGCCGCAGTACTCGGTGTGATATCTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCA TTTTTTATGAAACACTCCAAATTAATTGAACTAAGTTAATGTAGAGCGATACTAGAGAAGAGTACCACTACCCTCTTCAAGAATAAACTTTCTTTTATTTCATACTT] [-] EMBL CNS099T7 [ TACTCGGTGTGATATCTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCA TTTTTTATGAAACACTCCAAATTAATTGAACTAAGTTAATGTAGAGCGATACTAGAGAAGAGTACCACTACCCTCTTCAAGAATAAAC ] consensusID : consensus_9470#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 846 fasta sequence [GTTGGATACGATTGGACGAGCAAAAATAAGTGAAGAGG-AAACAGT-GCGAAGA-TGAAAAAACATCCCAGTGGCGCCCTA-TCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG-ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT-GGGTGTG-CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACA] [+] EMBL CNS09G52 [GTTGGATACGATTGGACGAGCAAAAATAAGTGAAGAGGAAAACAGT GCGAAGACTGAAAAAACATCCCAGTGGCGCCCTA TCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAAG CGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCTAGGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCG ] [+] EMBL CNS099T6 [ AAGTGAAGAGG AAACAGT GCGAAGACTGAAAAAACATCCCAGTGGCGCCCTA TCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAA CCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCGCACACGATACTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCTGGGGTGTGTCTTTGCGACCGAGGAGGATGATAA ] [+] EMBL BX468908 [ GAGG CAAGAATCGGCACGA TGGAGAAACATCCCAGTGGCGCCCTACTCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAACAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCA ] [+] EMBL BM616655 [ ccgGTAAGATAGACGTAAAGTTTTGTAAATATTGCGCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCTGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCA ] [+] EMBL BX615784 [ GACGTAAAGTTTTGTAAATATTGCGCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAACAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGTGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGGTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCT ] [+] EMBL BM613147 [ cccacgcgtCCG CGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACC ] [+] EMBL BX624761 [ CAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACA] [+] EMBL BM617214 [ ccgCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCTATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCG ACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCT GGGTGTG CTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGC ] consensusID : consensus_9470#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 630 fasta sequence [CCGGAAAAGGCGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTG] [+] EMBL BM596377 [CCGGAAAAGGCGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGGCAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGGCGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGAGCGCTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGCAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTG] consensusID : consensus_9470#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 521 fasta sequence [AGATCGCCACGAGGTGTGATAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGTCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCGTAAGTGATCG] [+] EMBL AL696249 [AGATCGCCACGAGGTGTGATAGCGCCGTGGGTGCAGCCGTGCAACTGTCGCGGCGTCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGATCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACACGGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACATCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATTGGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCCTCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGGTGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAAATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCGTAAGTGATCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9470#0 ------------------------------------------------------------ consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 GTTGGATACGATTGGACGAGCAAAAATAAGTGAAGAGGAAACAGTGCGAAGATGAAAAAA 60 consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 -----------------------------------------------------------G 1 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 CATCCCAGTGGCGCCCTATCGAAAAGGCGTAAGATAGACGTAAAGTTTTGTAAATATTGC 120 consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 GCAAGAATCCCGACGAGNGTAAGACAGAAGAAACATCCCAGTGGCGCCCTATCGAAAAGG 61 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 GCAAGCCGACGACAGACAATTTCCACCAAGGGAAAACTTTTCCCATTCCTTCTCTGTCCT 180 consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 CGTAAGATAGACGTAAAGTTTTGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGG 121 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 ATTTACCTTGCACATTTAATAGGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGG 240 consensus_9470#2 -----------CCGGAAAAGGCGGGTCAGCTGTTGTTGTAAGCGACACGATGCTCACAGG 49 consensus_9470#0 CAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGG 181 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 CAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGG 300 consensus_9470#2 CAACCAGGAATTCAATCCGGTGGATGGTCAAGGTAATGATGAGAAGGCTACAGCTGATGG 109 consensus_9470#0 TGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGA 241 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 CGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGA 360 consensus_9470#2 CGATGCTGGTGCTGCTGCATCCGTCGCAGCATCACAACAGGCCCAACCGCAAGAGGAAGA 169 consensus_9470#0 GCGGTACTGCTGGGTTTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCA 301 consensus_9470#3 -----------------------AGATCGCCACGA--GGTGTGATAGCGCCGTGGGTGCA 35 consensus_9470#1 GCGCTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCA 420 consensus_9470#2 GCGCTACTGCTGGGTGTGCTTTGCGACCGAGGAGGATGATAAGGTAGCGCCGTGGGTGCA 229 ** ** * * * * **************** consensus_9470#0 GCCGTGCAACTGTCGCGGCG-CAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGA 360 consensus_9470#3 GCCGTGCAACTGTCGCGGCGTCAACCAAGTGGGTCCATCAGTCCTGCCTTAAGCGGTGGA 95 consensus_9470#1 GCCGTGCAACTGTCGCGGCG-CAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGA 479 consensus_9470#2 GCCGTGCAACTGTCGCGGCG-CAACCAAGTGGGTCCATCAGTCCTGTCTTAAGCGGTGGA 288 ******************** ************************* ************* consensus_9470#0 TCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACAC 420 consensus_9470#3 TCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACAC 155 consensus_9470#1 TCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACAC 539 consensus_9470#2 TCGACGAAAAGCAGAAGGGCAACCCATACAAGAGCATCAGCTGCCCGCAGTGTCAAACAC 348 ************************************************************ consensus_9470#0 GGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACA 480 consensus_9470#3 GGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACA 215 consensus_9470#1 GGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACA 599 consensus_9470#2 GGTACATCATCATCCTGCCGACGATGGGCAGCTTCGCCTTTCTGCTGGAGCGACTCGACA 408 ************************************************************ consensus_9470#0 TCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATT 540 consensus_9470#3 TCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATT 275 consensus_9470#1 TCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATT 659 consensus_9470#2 TCATTGCGAAGCAGCTCAGCCCGGGTATGGCGGCTGGGGCCATCGTGTGCTCGATCTATT 468 ************************************************************ consensus_9470#0 GGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCC 600 consensus_9470#3 GGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCC 335 consensus_9470#1 GGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCC 719 consensus_9470#2 GGTCTGCCATCACGTTTGGCGCCGTCACCGTGCTGCAGACGACTGGGTTCGAGCGGGGCC 528 ************************************************************ consensus_9470#0 TCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGG 660 consensus_9470#3 TCTCGATGATGGAGCAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGG 395 consensus_9470#1 TCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGG 779 consensus_9470#2 TCTCGATGATGGAACAGGCCGAACCGATTGCACTGCTGCTGTGTTTGCCGACCATCCCGG 588 ************* ********************************************** consensus_9470#0 TGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAA 720 consensus_9470#3 TGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAA 455 consensus_9470#1 TGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTGTTCTTCGCTTTCTGCAAA 839 consensus_9470#2 TGTTGCTCGTGATCGGGCGCATGTTTCGCTGGGAGGACATTG------------------ 630 ****************************************** consensus_9470#0 ATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTC-CAAC 779 consensus_9470#3 ATCGACAGTTTGACGTACGGAAGTATCCCGTCATCTCACTGATGTTACCTGTCTCGTAAG 515 consensus_9470#1 ATCGACA----------------------------------------------------- 846 consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 GAACCGAGCCCGCGCTATCCGGAACCGTACCCAAGCAGCACGGTTACAACCTCGGAACCA 839 consensus_9470#3 TGATCG------------------------------------------------------ 521 consensus_9470#1 ------------------------------------------------------------ consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 CTCTCTGTGACGCGCATATTCTGTGGCGCACTATTGCTGCCCACGGTGTCCACCGTCGTC 899 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 ------------------------------------------------------------ consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 GGGAAAATTTTGTTCAAATCCATCAAGAACGATCTGCATCGTACGCTGCTTGGTGGATTT 959 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 ------------------------------------------------------------ consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 GTGTTCGTTGCGGTCAAGGGTGTGCTGAAAATTTACTTCCACCAGAAAAAGCATAACCGT 1019 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 ------------------------------------------------------------ consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 GCCAAACAGCGCCAAATACTGGACTATACACCCGAAAACGTGCGCAAGTACACGTTGCGA 1079 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 ------------------------------------------------------------ consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 ACCCAACCCCCGGAAGGCCAGCATCAACACGGGCAGCAGGCATCGCAGCTGGACCGTAAC 1139 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 ------------------------------------------------------------ consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 CGTGCGGACTTGGTCGAGGGAACCGGATAGCAGCAGCAGCCGCAGTACTCGGTGTGATAT 1199 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 ------------------------------------------------------------ consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 CTACTATGAACTGAGCATACTGACTTAATATTCTATTTTATGTTTTGTTATTCATTTTTT 1259 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 ------------------------------------------------------------ consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 ATGAAACACTCCAAATTAATTGAACTAAGTTAATGTAGAGCGATACTAGAGAAGAGTACC 1319 consensus_9470#3 ------------------------------------------------------------ consensus_9470#1 ------------------------------------------------------------ consensus_9470#2 ------------------------------------------------------------ consensus_9470#0 ACTACCCTCTTCAAGAATAAACTTTCTTTTATTTCATACTT 1360 consensus_9470#3 ----------------------------------------- consensus_9470#1 ----------------------------------------- consensus_9470#2 ----------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||