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Anopheles gambiae
cluster # 9487 cluster # 9487       Sequences # 17       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9487#0 length = 1300 sequences # 16  
consensus_9487#1 length = 589 sequences # 1  

consensusID : consensus_9487#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1300
fasta sequence
                              [TAACGTATTTATTGTAATTCAAGCGTATATTTTTTTAAACAAAACTCAAATTTAAATCGTTTATCCTACCCCATCCCAGACGGTCCTTTTTCATTTCCGTGCGCAGCAGGACGGTACATCGTTTATCGCATGAGCGTTCGGATAACGCAGCGGAGGTTCAGGCCCATCAAATGGATGCGTTTTGGCGAGCTTTCGTGCTAGATACTCTTTTCGGATTTGGGCCGGATCACGATACTTGTCCATGTACAGGTTGAACGGCTTGCGCAGTGGGAACCATTCTTGTTCGCGGATGTATGGTGCTGGAAAATCGTATTCGAACACGGGATGTTGCAGCTTTAACTTTTCTCTGTAAAA-GTCAGGCAGGCTGGTATCCCAATCAGATTGGAAAAACGCTAGACCGGCGGGCGTGATGCTGTCTTGATGCTGGCGGTAGAAATCAAGCGTGCGGAATGTGCGCGCTGGCAAGTCAAATGCGTCGGTTATCCGGTACTGCGAGAAATCTAGACGACTTGTCTGCTTGTACAACACAAAAATGTGTCGCTGGTACCCGGTGCCCTTAGCAGGGAACGGCTGCAGATATGGAACCAGCTCTTCCCCACCCGTAACGTCTCCGTTGGGAATGTTTCCTACGAACCAGTGGCAATATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC-ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG-CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCGCGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCCGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTA-CCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAACGATGCATAAAGAAGGCCATGTTTATCTCACAGCGGCGG]

[+] EMBL CNS08FMJ             [TAACGTATTTATTGTAATTCAAGCGTATATTTTTTTAAACAAAACTCAAATTTAAATCGTTTATCCTACCCCATCCCAGACGGTCCTTTTTCATTTCCGTGCGCAGCAGGACGGTACATCGTTTATCGCATGAGCGTTCGGATAACGCAGCGGAGGTTCAGGCCCATCAAATGGATGCGTTTTGGCGAGCTTTCGTGCTAGATACTCTTTTCGGATTTGGGCCGGATCACGATACTTGTCCATGTACAGGTTGAACGGCTTGCGCAGTGGGAACCATTCTTGTTCGCGGATGTATGGTGCTGGAAAATCGTATTCGAACACGGGATGTTGCAGCTTTAACTTTTCTCTGTAAAACGTCAGGCAGGCTGGTATCCCAATCAGATTGGAAAAACGCTAGACCGGCGGGCGTGATGCTGTCTTGATGCTGGCGGTAGAAATCAAGCGTGCGGAATGTGCGCGCTGGCAAGTCAAATGCGTCGGTTATCCGGTACTGCGAGAAATCTAGACGACTTGTCTGCTTGTACAACACAAAAATGTGTCGCTGGTACCCGGTGCCCTTAGCAGGGAACGGCTGCAGATATGGAACCAGCTCTTCCCCACCCGTAACGTCTCCGTTGGGAATTTTTCCTACGAACCAGTGGCAATATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS090PX             [                                              CAAATTTCCATCGTTTATCCTACCCCATCCCAGACGGTCCTTTTTCATTTCCGTGCGCAGCAGGACGGTACATCGTTTATCGCATGACCGTTCGGATAACGCAGCGGAGGTTCAGGCCCATCACATGGATGCCTTTTGGCGAGCTTTCGTGCTAGACACTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BM594822             [                                                                                                                                                                   CCATCAAATGGATGCGTTTTGGCGAGCTTTCGTGCTAGATACTCTTTTCGGATTTGGGCCGGATCACGATACTTGTCCATGTACAGGTTGAACGGCTTGCGCAGTGGGAACCATTCTTGTTCGCGGATGTATGGTGCTGGAAAATCGTATTCGAACACGGGATGTTGCAGCTTTAACTTTTCTCTGTAAAA GTCAGGCAGGCTGGTATCCCAATCAGATTGGAAAAACGCTAGACCGGCGGGCGTGATGCTGTCTTGATGCTGGCGGTAGAAATCAAGCGTGCGGAATGTGCGCGCTGGCAAGTCAAATGCGTCGGTTATCCGGTACTGCGAGAAATCTAGACGACTTGTCTGCTTGTACAACACAAAAATGTGTCGCTGGTACCCGGTGCCCTTAGCAGGGAACGGCTGCAGATATGGAACCAGCTCTTCCCCACTCGTAACGTCTCCGTTGGGAATGTTTCCTACGAACCAGTGGCAATATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BM618825             [                                                                                                                                                                                                                                                   GTACAGGTTGAACGGCTTGCGCAGTGGGAACCATTCTTGTTCGCGGATGTATGGTGCTGGAAAATCGTATTCGAACACGGGATGTTGCAGCTTTAACTTTTCTCTGTAAAA GTCAGGCAGGCTGGTATCCCAATCAGATTGGAAAAACGCTAGACCGGCGGGCGTGATGCTGTCTTGATGCTGGCGGTAGAAATCAAGCGTGCGGAATGTGCGCGCTGGCAAGTCAAATGCGTCGGTTATCCGGTACTGCGAGAAATCTAGACGACTTGTCTGCTTGTACAACACAAAAATGTGTCGCTGGTACCCGGTGCCCTTAGCAGGGAACGGCTGCAGATATGGAACCAGCTCTTCCCCACTCGTAACGTCTCCGTTGGGAATGTTTCCTACGAACCAGTGGCAATATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGcgg                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BX625665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATGCGTCGGTTATCCGGTACTGCGAGAAATNTAGACGACTTGTCTGCTTGTACAACACAAAAATGTGTCGCTGGTACCCGGTGCCCTTAGCAGGGAACGGCTGCAGATATGGAACCAGCTCTTCCCCACTCGTAACGTCTCCGTTGGGAATGTTTCCTACGAACCAGTGGCAATATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAG                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08UHI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GACTTGTCTGCTTGTACAACACAAAAATGTGTCGCTGGTACCCGGTGTTTTTGGCAGGGAACGGCTGCAGATATGGAACCAGCTCTTCCCCACCCGTAACGTCTCCGTTGGGAATGTTTCCTACGAACCAGTGGCAATATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTATTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGC                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS08FMI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGAACTGCTGCAGATATGGAACCAGCTCTTCCCCACCCGTAACGTCTCCGTTGGGAATGTTTCCTACGAACCAGTGGCAATATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACCAACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAG TACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGGCAATTGAACCGATCGCGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCTGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTATCCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAA                                       ]
[-] EMBL BX608123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCAATATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCACGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCCGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTA CCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAACGATGCATAAAGAAGGCCATGTTTA              ]
[-] EMBL BM578564             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAATATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCGCGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCCGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTA CCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACgg                                          ]
[-] EMBL BX621102             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGNNGGTCAGCAGCAAAGACC GCCAGCTTTGCNGTTCCTCANTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAGACTTGTGTTTCGNTCGGCTTCAGAACATTTCCATNCTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGANCACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTGTAGATCAATTTTCAACTT                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BX602243             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TATTCCTTTTCACTATCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCGCGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCCGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTA CCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAACGATGCATAAAGAAGGCCA                    ]
[-] EMBL BM583156             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCCTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCGCGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCCGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTA CCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACCGG                                         ]
[-] EMBL BM616215             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCGCGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCCGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTA CCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAACGATGCATAAAGAAGGCCATGTTTATCTCACAGCGG   ]
[-] EMBL BM576062             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCGCGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCCGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTA CCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAACGATGCATAAAGAAGGCCATGTTTATCTCACAGaaccgg]
[-] EMBL BM588407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAGCAAAGACC ACCAGCTTTGCTGTTCCTCACTGGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAG CTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTATTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACACACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGCACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCGCGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCCGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTA CCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAACGATGCATAAAGAAGGCCATGTTTATCTCcgg       ]
[-] EMBL BX605844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCGCGCCGGTTTAATGTGGGGAAATCCGATGTTAACGGGCTGGGTAATTTCCGGATCTAATACTTTCTCACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTA CCGCGCAGCTGATGGCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAACGATGCATAAAGAAGGCCATGTTTA              ]


>consensus_9487#0 TAACGTATTTATTGTAATTCAAGCGTATATTTTTTTAAACAAAACTCAAATTTAAATCGT TTATCCTACCCCATCCCAGACGGTCCTTTTTCATTTCCGTGCGCAGCAGGACGGTACATC GTTTATCGCATGAGCGTTCGGATAACGCAGCGGAGGTTCAGGCCCATCAAATGGATGCGT TTTGGCGAGCTTTCGTGCTAGATACTCTTTTCGGATTTGGGCCGGATCACGATACTTGTC CATGTACAGGTTGAACGGCTTGCGCAGTGGGAACCATTCTTGTTCGCGGATGTATGGTGC TGGAAAATCGTATTCGAACACGGGATGTTGCAGCTTTAACTTTTCTCTGTAAAAGTCAGG CAGGCTGGTATCCCAATCAGATTGGAAAAACGCTAGACCGGCGGGCGTGATGCTGTCTTG ATGCTGGCGGTAGAAATCAAGCGTGCGGAATGTGCGCGCTGGCAAGTCAAATGCGTCGGT TATCCGGTACTGCGAGAAATCTAGACGACTTGTCTGCTTGTACAACACAAAAATGTGTCG CTGGTACCCGGTGCCCTTAGCAGGGAACGGCTGCAGATATGGAACCAGCTCTTCCCCACC CGTAACGTCTCCGTTGGGAATGTTTCCTACGAACCAGTGGCAATATTCCTTTTCACTATC CTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACCACCAGCTTTGCTGTTCCTCACT GGCCGGCTGCCCAGTAAAGTTAAAGTTTCCATCAAACTGCACCTGTGGGGCAGCTTGTGT TTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCTGGTA TTGGATGTCCAAAGCTACGCGCGGCACAAAATAGGCAGCCCCGAACAGATGCTCGAACAC ACCGTAATGTTCGGCAATTCGCTTGATGTGGAAAGGACCGCTCGTTTTCACCCAATCTGC ACGCACTTGCTCTAGATCAATTTTCAACTTCCTTTCTCGCGACAGCCGCTCTAGCTCAGC ATTGTTTCTTTGGGCTTTGAGGTGTTGCAGACGCTCGGACAATTGAACCGATCGCGCCGG TTTAATGTGGGGAAATCCGATGTTAACGGGCCGGGTAATTTCCGGATCTAATACTTTCTC ACCTTGCAATCGCTGCACAAGCGTTTTGGCAACGCCCGGCGGCTTACCGCGCAGCTGATG GCCATTACGAACGCAAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGA ACGATGCATAAAGAAGGCCATGTTTATCTCACAGCGGCGG



consensusID : consensus_9487#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 589
fasta sequence
                              [CCCAGTAAACGTTAAAGTNTGCCACTCATAGCTGCACCTGTGGGGCAGCTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGTCCTGTATTGGATGTCCAAGNTACGCGCGGCACTTATATAGGCAGCCCCGAACAGATGGCTCGTACACACCGTAATCNTTCGGCAATTCGCTTGATGTGGAAAGGACCGTCTCGTTTTCACCCAATCTGCACGCACTTGCTTAGATCGAATTGNCGACTTCCTTNTCTCNNGACACCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTGTGCTAGACGCATCGGACAATTGAACCGATCGCGCCGNTTTAATGTGGGGAAATCCAGATGTTAACGGGCCGGGTAATTTCCGGATATAATACTTTCGTCACCTTGTCAATCGCATGCACAAGACGTTTTAGGCAACGCCCGACGGCTTACCGCGCAGCTGATGGCCACTTACGAACGCAGAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAACGAGTGCTATAAAGAAGGCCATGTTTAAACCTCGGGCG]

[-] EMBL AL693334             [CCCAGTAAACGTTAAAGTNTGCCACTCATAGCTGCACCTGTGGGGCAGCTTGTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGTCCTGTATTGGATGTCCAAGNTACGCGCGGCACTTATATAGGCAGCCCCGAACAGATGGCTCGTACACACCGTAATCNTTCGGCAATTCGCTTGATGTGGAAAGGACCGTCTCGTTTTCACCCAATCTGCACGCACTTGCTTAGATCGAATTGNCGACTTCCTTNTCTCNNGACACCCGCTCTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTGTGCTAGACGCATCGGACAATTGAACCGATCGCGCCGNTTTAATGTGGGGAAATCCAGATGTTAACGGGCCGGGTAATTTCCGGATATAATACTTTCGTCACCTTGTCAATCGCATGCACAAGACGTTTTAGGCAACGCCCGACGGCTTACCGCGCAGCTGATGGCCACTTACGAACGCAGAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAATATTCACAGGAACGAGTGCTATAAAGAAGGCCATGTTTAAACCTCGGGCG]


>consensus_9487#1 CCCAGTAAACGTTAAAGTNTGCCACTCATAGCTGCACCTGTGGGGCAGCTTGTGTTTCGC TCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGTCCTGTATTGGA TGTCCAAGNTACGCGCGGCACTTATATAGGCAGCCCCGAACAGATGGCTCGTACACACCG TAATCNTTCGGCAATTCGCTTGATGTGGAAAGGACCGTCTCGTTTTCACCCAATCTGCAC GCACTTGCTTAGATCGAATTGNCGACTTCCTTNTCTCNNGACACCCGCTCTAGCTCAGCA TTGTTTCTTTGGGCTTTGAGGTGTGTGCTAGACGCATCGGACAATTGAACCGATCGCGCC GNTTTAATGTGGGGAAATCCAGATGTTAACGGGCCGGGTAATTTCCGGATATAATACTTT CGTCACCTTGTCAATCGCATGCACAAGACGTTTTAGGCAACGCCCGACGGCTTACCGCGC AGCTGATGGCCACTTACGAACGCAGAAATGTTTGTAGCACGTTCGGCCTAACTAGTAAAT ATTCACAGGAACGAGTGCTATAAAGAAGGCCATGTTTAAACCTCGGGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9487#0      TAACGTATTTATTGTAATTCAAGCGTATATTTTTTTAAACAAAACTCAAATTTAAATCGT 60
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      TTATCCTACCCCATCCCAGACGGTCCTTTTTCATTTCCGTGCGCAGCAGGACGGTACATC 120
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      GTTTATCGCATGAGCGTTCGGATAACGCAGCGGAGGTTCAGGCCCATCAAATGGATGCGT 180
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      TTTGGCGAGCTTTCGTGCTAGATACTCTTTTCGGATTTGGGCCGGATCACGATACTTGTC 240
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      CATGTACAGGTTGAACGGCTTGCGCAGTGGGAACCATTCTTGTTCGCGGATGTATGGTGC 300
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      TGGAAAATCGTATTCGAACACGGGATGTTGCAGCTTTAACTTTTCTCTGTAAAAGTCAGG 360
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      CAGGCTGGTATCCCAATCAGATTGGAAAAACGCTAGACCGGCGGGCGTGATGCTGTCTTG 420
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      ATGCTGGCGGTAGAAATCAAGCGTGCGGAATGTGCGCGCTGGCAAGTCAAATGCGTCGGT 480
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      TATCCGGTACTGCGAGAAATCTAGACGACTTGTCTGCTTGTACAACACAAAAATGTGTCG 540
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      CTGGTACCCGGTGCCCTTAGCAGGGAACGGCTGCAGATATGGAACCAGCTCTTCCCCACC 600
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      CGTAACGTCTCCGTTGGGAATGTTTCCTACGAACCAGTGGCAATATTCCTTTTCACTATC 660
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      CTCAAAATGTCCATCCGGGTTGGTCAGCAGCAAAGACCACCAGCTTTGCTGTTCCTCACT 720
consensus_9487#1      ------------------------------------------------------------
                                                                                  

consensus_9487#0      GGCCGGCTGCCCAGTAAA-GTTAAAGTTT-CCA-TCA-AACTGCACCTGTGGGGCAGCTT 776
consensus_9487#1      ---------CCCAGTAAACGTTAAAGTNTGCCACTCATAGCTGCACCTGTGGGGCAGCTT 51
                               ********* ******** * *** *** * ********************

consensus_9487#0      GTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGCCT 836
consensus_9487#1      GTGTTTCGCTCGGCTTCAGAACATTTCCATACTTCACGGGATGAAGCAATTCGCCTGTCC 111
                      ********************************************************* * 

consensus_9487#0      GGTATTGGATGTCCAAAGCTACGCGCGGCACAAA-ATAGGCAGCCCCGAACAGATG-CTC 894
consensus_9487#1      TGTATTGGATGTCCAA-GNTACGCGCGGCACTTATATAGGCAGCCCCGAACAGATGGCTC 170
                       *************** * ************  * ********************* ***

consensus_9487#0      GAACACACCGTAAT-GTTCGGCAATTCGCTTGATGTGGAAAGGACCG-CTCGTTTTCACC 952
consensus_9487#1      GTACACACCGTAATCNTTCGGCAATTCGCTTGATGTGGAAAGGACCGTCTCGTTTTCACC 230
                      * ************  ******************************* ************

consensus_9487#0      CAATCTGCACGCACTTGCTCTAGATC-AATTTTCAACTTCCTTT-CTCGCGACAGCCGCT 1010
consensus_9487#1      CAATCTGCACGCACTTGCT-TAGATCGAATTGNCGACTTCCTTNTCTCNNGACACCCGCT 289
                      ******************* ****** ****  * ********  ***  **** *****

consensus_9487#0      CTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGT-TGC-AGACGC-TCGGACAATTGAA 1067
consensus_9487#1      CTAGCTCAGCATTGTTTCTTTGGGCTTTGAGGTGTGTGCTAGACGCATCGGACAATTGAA 349
                      *********************************** *** ****** *************

consensus_9487#0      CCGATCGCGCCGGTTTAATGTGGGGAAATCC-GATGTTAACGGGCCGGGTAATTTCCGGA 1126
consensus_9487#1      CCGATCGCGCCGNTTTAATGTGGGGAAATCCAGATGTTAACGGGCCGGGTAATTTCCGGA 409
                      ************ ****************** ****************************

consensus_9487#0      TCTAATACTTTC-TCACCTTG-CAATCGC-TGCACAAG-CGTTTT-GGCAACGCCCGGCG 1181
consensus_9487#1      TATAATACTTTCGTCACCTTGTCAATCGCATGCACAAGACGTTTTAGGCAACGCCCGACG 469
                      * ********** ******** ******* ******** ****** *********** **

consensus_9487#0      GCTTACCGCGCAGCTGATGGCCA-TTACGAACGCA-AAATGTTTGTAGCACGTTCGGCCT 1239
consensus_9487#1      GCTTACCGCGCAGCTGATGGCCACTTACGAACGCAGAAATGTTTGTAGCACGTTCGGCCT 529
                      *********************** *********** ************************

consensus_9487#0      AACTAGTAAATATTCACAGGAACGA-TGC-ATAAAGAAGGCCATGTTTATCTCACAGCGG 1297
consensus_9487#1      AACTAGTAAATATTCACAGGAACGAGTGCTATAAAGAAGGCCATGTTTAAACCTCGGGCG 589
                      ************************* *** *******************   * * *  *

consensus_9487#0      CGG 1300
consensus_9487#1      ---
                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)