These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9509#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 855 fasta sequence [CCGCGAAAACAGAGCACCAAAAAGGACGCAAAATCCCACGA--TCCCTCGCACGCACGCAATTGCCCTGCAGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG-A-AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGATGTGGGTCATATATTGATTTAACTTTGCAGAAAGAAGGTCACGTGCGCA-CAGGG-GTTCGTCTTTCGTGCA-TTTTGCATCCATGTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGGGGGGGG] [+] EMBL BM580735 [CCGCGAAAACAGAGCACCAAAAAGGACCCAAAATCCCACGA TCCCTCGCACGCACGCAATTGCCCTGCTGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCG TTGCAGATATCAGATATCATCCAGC ] [+] EMBL BM580765 [ cCGCAAAATCCCACGA TCCCTCGCACGCACGCAATTGCCCTGCAGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCA ] [+] EMBL AL692615 [ cccgaggttAATCCCACGA TCCCTCGCACGCACGCAATTGCCCTGCAGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGAT ] [+] EMBL AL930787 [ agAATTCCCCGAGGTTTCTCGCACGCACGCAATTGCCCTGCAGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGATGTGGG ] [+] EMBL BX617138 [ TGCCCTGCTGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATG ] [+] EMBL BM655894 [ ccgCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCG TTGCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGATGTGGGTCATATATTGATTTAACTTTGCAGAAAGAAGGTCACGTGCGCATGAGGA GTTCGTCTTTCGTGCATTTTTGCATCCATGTGGGGGTCGCTTTCGTTG ] [+] EMBL BM594184 [ ccgCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTG ] [+] EMBL CNS08GLZ [ CCGTGCTGCAGCGTAAACTCGAAGCGGAG TGAA AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAA CAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTACCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTTTTTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGAAATGGGTCATATATTGATTTAACTTTGCAGAAAGAAGGTCACGTGCGCA CAGGG GTTCGTCTTTCGTGCA TTTTGCATCCATGTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGGGGGGGG] [+] EMBL CNS08GOS [ AAGCGGA CTG ATAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAA CAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTACCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTTTTTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGTTGTGGGTCATATATTGATTTAACTTTGCAGAAAGAAGGTCACGTGCGCA CAGGGTGTTCGTCTTTCGTGCA TTTTGCATCCATGTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGGG ] [-] EMBL CNS08OUY [ ttccctaagATATTCATTTAA ATGCAGAAAGAAGGTTACGTGCGCAGCAGGG GTTCGTCTTTCGTGCA TTTTGCATCCATGTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGAAAAAA ] consensusID : consensus_9509#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 679 fasta sequence [TCAGCAGAATCCCCGAGGTTAATGCTAGAAGCCAACCAACACGNGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATACACGAAGGAGCTAGAAGCGGTGCGGGGAGAACATATACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATAGCAGTACCAGAGCCAGATGGCGATAAGCAAAGCAGTAGTNGTACGTACGACCGTTTGCTGATAATTCAGATATACATCCAGCACGCTAACCATATGCAATCATATTATCCGGAATAAATCGGGCACGCACCATCTATCTAGTATTGAGCTATCGAACCAGCTACTATTTTTCCACGTTAATTTGTTGAGGTCGCGTAAACAAAGGCTCNACGGCGCGCACTGTGGGTCATATATTGATTTAACTTTGCAGAACAGAAGGTCACGTGCGCAGCGAGAGAGTATCGTCTNTNNCGGTCGCACTTTTAGNATCCATGTGTGGGGTACGGCTCTATATGTATGNCAGGATACTAAGTAAAACCGTNCCACCTGGAATCATTCGACAAAAGTGAANAAGNACANAACCAACAACAAACAACAAACACAGGGCATNTATGCGGCCCGCCTAGCTTATNCCCTTC] [+] EMBL AL932300 [TCAGCAGAATCCCCGAGGTTAATGCTAGAAGCCAACCAACACGNGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATACACGAAGGAGCTAGAAGCGGTGCGGGGAGAACATATACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATAGCAGTACCAGAGCCAGATGGCGATAAGCAAAGCAGTAGTNGTACGTACGACCGTTTGCTGATAATTCAGATATACATCCAGCACGCTAACCATATGCAATCATATTATCCGGAATAAATCGGGCACGCACCATCTATCTAGTATTGAGCTATCGAACCAGCTACTATTTTTCCACGTTAATTTGTTGAGGTCGCGTAAACAAAGGCTCNACGGCGCGCACTGTGGGTCATATATTGATTTAACTTTGCAGAACAGAAGGTCACGTGCGCAGCGAGAGAGTATCGTCTNTNNCGGTCGCACTTTTAGNATCCATGTGTGGGGTACGGCTCTATATGTATGNCAGGATACTAAGTAAAACCGTNCCACCTGGAATCATTCGACAAAAGTGAANAAGNACANAACCAACAACAAACAACAAACACAGGGCATNTATGCGGCCCGCCTAGCTTATNCCCTTC] consensusID : consensus_9509#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 641 fasta sequence [AACAGAGAACCAAAAAGGACCCAAAATCCCACGATCCCTCGCACGCACGCAATTGCCCTGCTGCTGATTCAGAAACACCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGAAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATNNGGCACGCACCATCTTCTAGTTTGAGCTATCGACAAAAAAAAAANAAAAAAAAAAAAAAAACNNTGNGGCCCNNCCGGCCCAATGA] [+] EMBL CF541663 [AACAGAGAACCAAAAAGGACCCAAAATCCCACGATCCCTCGCACGCACGCAATTGCCCTGCTGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGAAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATNNGGCACGCACCATCTTCTAGTTTGAGCTATCGACAAAAAAAAAANAAAAAAAAAAAAAAAACNNTGNGGCCCNNCCGGCCCAATGA] [+] EMBL CNS08OUX [ GCGATTGCTCTGCTGCTGATTCAGAAACACCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTtaatcttag ] [-] EMBL CNS091JS [ TGATTCAGAAACACCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTACCGGAATAAATCGGGCACGCACCATTTTTTAGGTTGAGCT TCGAAAAAAAAAAAAAAAAAAAA ] consensusID : consensus_9509#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 572 fasta sequence [CCGCCCACGCGTCCGGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCGTTGCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCT] [+] EMBL BM636093 [CCGCCCACGCGTCCGGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCGTTGCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCT] [+] EMBL BM632027 [ ccgAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTTCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCGTTGCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAATAAATCGGGC ] consensusID : consensus_9509#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence [CCAAGGAATCCCCCACGANGTGAATGACCCGAAAATCCACGATCCCTTCGCACGCACGCAAGTTGCGCCGTGGCAAGCTGGTTCAGAAAACATCGGCCCAAGCCCTTCCTACAAAATTGGACAAGGGAAGGTCGGCCGTGCTGCACGCGTAAACTCGGAAGCCGGAGCTGAAAAACTTCCAGGGACCAACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTTACTTCGAAAACAAGAGCATTCTGGAGGAGCTTGCAAATGCTTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGA] [+] EMBL BX468977 [CCAAGGAATCCCCCACGANGTGAATGACCCGAAAATCCACGATCCCTTCGCACGCACGCAAGTTGCGCCGTGGCAAGCTGGTTCAGAAAACATCGGCCCAAGCCCTTCCTACAAAATTGGACAAGGGAAGGTCGGCCGTGCTGCACGCGTAAACTCGGAAGCCGGAGCTGAAAAACTTCCAGGGACCAACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTTACTTCGAAAACAAGAGCATTCTGGAGGAGCTTGCAAATGCTTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9509#2 -----------------AACAGAGAACCAAA--AAGGACCCAAAATCCCACGATCCCT-C 40 consensus_9509#4 -----------CCAAGGAATCCCCCACGANGTGAATGACCCGAAAATCCACGATCCCTTC 49 consensus_9509#3 ------------------------------------------------------------ consensus_9509#0 ----------CCGCGAAAACAGAGCACCAAA--AAGGACGCAAAATCCCACGATCCCT-C 47 consensus_9509#1 TCAGCAGAATCCCCGAGGTTAATGCTAGAAGCCAACCA-ACACGNGTGTACAAACTGTAC 59 consensus_9509#2 GCACGCACGCAA-TTGCCCTGCTGC----TGATTCAGAAA-CACCG-CCCAA--CCTTCC 91 consensus_9509#4 GCACGCACGCAAGTTGCGCCGTGGCAAGCTGGTTCAGAAAACATCGGCCCAAGCCCTTCC 109 consensus_9509#3 -----------------------------CCGCCCACGCG--TCCGGCCCAA--CCTTCC 27 consensus_9509#0 GCACGCACGCAA-TTGCCCTGCAGC----TGGTTCAGAAA-CATCG-CCCAA--CCTTCC 98 consensus_9509#1 GGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATC 119 ** * * * * consensus_9509#2 TACAAAAT-GGACAAGGAA--GTCG-CCGTGCTGCA-GCGTAAACTCGAAG--CGGAGCT 144 consensus_9509#4 TACAAAATTGGACAAGGGAAGGTCGGCCGTGCTGCACGCGTAAACTCGGAAGCCGGAGCT 169 consensus_9509#3 TACAAAAT-GGACAAGGAA--GTCG-CCGTGCTGCA-GCGTAAACTCGAAG--CGGAGCT 80 consensus_9509#0 TACAAAAT-GGACAAGGAA--GTCG-CCGTGCTGCA-GCGTAAACTCGAAG--CGGAGCT 151 consensus_9509#1 GAGTACATACACGAAGGAGCTAGAAGCGGTGCGGGGAGAACATATACGCAG-CTGGAAGC 178 * * ** **** * **** * * * * ** * *** consensus_9509#2 GAAAAACTTC-AAGGAC--ACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCA 201 consensus_9509#4 GAAAAACTTCCAGGGACCAACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCA 229 consensus_9509#3 GAAAAACTTC-AAGGAC--ACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCA 137 consensus_9509#0 GAAAAACTTC-AAGGAC--ACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCA 208 consensus_9509#1 GAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATAGCAGTACCAGAGCCAGA 238 *** * * * * ** * * ** * ** * * * * *** * consensus_9509#2 GCTCGATGGGCAGT--ACT--TCGAAAACAAGAGCATTCTGGAGGAGCT-GCAAATGCT- 255 consensus_9509#4 GCTCGATGGGCAGTT-ACT--TCGAAAACAAGAGCATTCTGGAGGAGCTTGCAAATGCTT 286 consensus_9509#3 GCTCGATGGGCAGT--ACT--TCGAAAACAAGAGCATTCTGGAGGAGCT-GCAAATGCT- 191 consensus_9509#0 GCTCGATGGGCAGT--ACT--TCGAAAACAAGAGCATTCTGGAGGAGCT-GCAAATGCT- 262 consensus_9509#1 TGGCGATAAGCAAAGCAGTAGTNGTACGTACGACCGTTTGCTGATAATTCAGATATACAT 298 **** *** * * * * * * ** * ** * * * ** * consensus_9509#2 GAAGCCAACCAACACGGTGTA--CAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCT- 312 consensus_9509#4 GAAGCCAACCAACACGGTGTA--CAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCT- 343 consensus_9509#3 GAAGCCAACCAACACGGTGTA--CAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCT- 248 consensus_9509#0 GAAGCCAACCAACACGGTGTA--CAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCT- 319 consensus_9509#1 CCAGCACGCTAACCATATGCAATCATATTATCCGGAATAA-ATCGGGCACGCACCATCTA 357 *** * *** ** * ** * * * *** ** * *** **** consensus_9509#2 -CGAGGA--GAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGAAGCTGAA 369 consensus_9509#4 -CGAGGA--GAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAA 400 consensus_9509#3 -CGAGGA--GAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAA 305 consensus_9509#0 -CGAGGA--GAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAA 376 consensus_9509#1 TCTAGTATTGAGCTATCGAACCAGCTACTATTTTTCCACGTTAATT-TGTTGAGGTCGCG 416 * ** * **** * * ** * * * * * ** ** * * * * consensus_9509#2 GCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCT 429 consensus_9509#4 GCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGA------------------ 442 consensus_9509#3 GCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCT 365 consensus_9509#0 GCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCT 436 consensus_9509#1 TAAACAAAGGCTCNACGGCGCGCA-CTGTGGGTCATATATTGATTTAACTTTGCAGAACA 475 ** ** **** *** * * * consensus_9509#2 GCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTAC 489 consensus_9509#4 ------------------------------------------------------------ consensus_9509#3 GCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCAC 425 consensus_9509#0 GCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTAC 496 consensus_9509#1 GAAGGTCACGTGCGCAGCGAGAGAGTATCGTCTNTNNCGGTCGCACTTTTAGNATC-CAT 534 consensus_9509#2 GACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAA 549 consensus_9509#4 ------------------------------------------------------------ consensus_9509#3 GACCGTT-GCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAA 484 consensus_9509#0 GACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAA 556 consensus_9509#1 GTGTGGGGTACGGCTCTATATGTATGNCAGGATACTAAGTAAAACCGTNCCACCTGGAAT 594 consensus_9509#2 TAAATNNGGCACGCACCATCTTCTAGTTTGAGCTATCGACAAAAAAAAAANAAAAAAAAA 609 consensus_9509#4 ------------------------------------------------------------ consensus_9509#3 TAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTT 544 consensus_9509#0 TAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTT 616 consensus_9509#1 CATTCGACAAAAGTGAANAAGNACANAACCAACAACAAACAACAAACACAGGGCATNTAT 654 consensus_9509#2 AAAAAAACNNTGNGGCCCNNCCGGCCCAATGA---------------------------- 641 consensus_9509#4 ------------------------------------------------------------ consensus_9509#3 AATTTGTTAGGTCGCGTAAACAAAGGCT-------------------------------- 572 consensus_9509#0 AATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGATGTGGGTCATATATTGATTTAA 676 consensus_9509#1 GCGGCCCGCCTAGCTTATNCCCTTC----------------------------------- 679 consensus_9509#2 ------------------------------------------------------------ consensus_9509#4 ------------------------------------------------------------ consensus_9509#3 ------------------------------------------------------------ consensus_9509#0 CTTTGCAGAAAGAAGGTCACGTGCGCACAGGGGTTCGTCTTTCGTGCATTTTGCATCCAT 736 consensus_9509#1 ------------------------------------------------------------ consensus_9509#2 ------------------------------------------------------------ consensus_9509#4 ------------------------------------------------------------ consensus_9509#3 ------------------------------------------------------------ consensus_9509#0 GTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGA 796 consensus_9509#1 ------------------------------------------------------------ consensus_9509#2 ----------------------------------------------------------- consensus_9509#4 ----------------------------------------------------------- consensus_9509#3 ----------------------------------------------------------- consensus_9509#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGGGGGGGG 855 consensus_9509#1 ----------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||