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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9515#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 913 fasta sequence
[AAAAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGGAACGAGGCCCGTGAGCCGGGCGAAAGAAATGTGGTGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC-GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC-CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG-CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC-GGC-GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG-AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAAAGGAAGGGCGCGCGACAGCGACGAGTTTTGCTCGAAAAAAAAAAAAAAAAAAAGGCCACATG]
[-] EMBL CNS09IME [AAAAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGGAACGAGGCCCGTGAGCCGGGCGAAAGAAATGTGGTGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCGATCCATTCGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC GGCACCGCAACCTCAAAAAAATCGACGGACCGGGGGGCCGGCTGGCTCAA CTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGG TACGCGGAGCGGCTCATTTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTAAAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTTTCATTCATTTGTTTAGAGTTta ]
[+] EMBL CNS09JIX [ ggCCGTGAGCCGGGCGAAAGAAATGTGGTGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCGATCCATTCGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGGCACCGCAACCTCAAAAACATCGACGGACCGGA GGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGC GAG GGCTCATCTCGGACGCGATCCGGCAC GCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTGTGGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAAAGGAAGGGCGCGCGACAGCGACGAGTTTTGCTCG ]
[+] EMBL BM589960 [ ccgGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTG ]
[+] EMBL CNS08RAV [ GTGTTTTGATTGAGT ACAACAGTACCGAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGAACTGGTGAGGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGC GAG GGCTCATCTCGGACGCGATCCGGCAC GCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGT CTGATGGACGAGGCGAAGAAGGACTACC GGCGGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAGTAGAGTGGGTGAGGGAAAATAATAATAAAAAagttg ]
[+] EMBL BM623429 [ ccgGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGACCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTGAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCCTACCCGGCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTGACTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGGAAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGT ]
[+] EMBL CNS08NFZ [ ACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCGATCCATTCGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACG GGAG GGCTCATCTCGGACGCGATCCGGCAC GCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGCCGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAAAGGAAGGGCGCGCGACAGCGACGAGTTTTGCTAAAAAAAAAAAAAAAAAAAAAGGCCACATG]
[+] EMBL BM582871 [ ccgACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGACCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTGAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCCTACCCGGCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAaa ]
[-] EMBL CNS08NG0 [ CGATTTTCGGTCCGTCCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CCAACTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGG TACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCAAAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAAAAACCGGAACCTG CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAAAGGAAGGGCGCGCGAgc ]
[+] EMBL CNS09IMD [ CAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGGGGA GGCTCATCTCGGACGCGATCCGGCAC GCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTCTTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAACGGAAGGGCGCGCGACAGCGA ]
consensusID : consensus_9515#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 835 fasta sequence
[AGGCAGAATCGCCCCGAGGTNTGAAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGGCGGGCGGACGAGGCGCGCGGGTACGGCGGAGCGG-TCATCTCGGACGCGATTCCGGCACGGCGACTGCCACCAAGCCGACGATGGAGAT-GGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTC-CG-CACGCGTATGTACAAAG-CCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAA-CCGTACCCGCCGCTGCTG-CCAA-CAGTCCAACAA-CGGAACCTGCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAGTAGAGTGGCTCACGGAAAATAATAATAAAAAACTTCCCTTAAAAAGGAAGGGCGCGCGAGCAGCGACGAGTTTTGCCCTGCATTCGCTCAAACCAAATGCAGTATGGTGTCG]
[+] EMBL AL696870 [AGGCAGAATCGCCCCGAGGTNTGAAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGGCGGGCGGACGAGGCGCGCGGGTACGGCGGAGCGG TCATCTCGGACGCGATTCCGGCACGGCGACTGCCACCAAGCCGACGATGGAGAT GGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTC CG CACGCGTATGTACAAAG CCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAA CCGTACCCGCCGCTGCTG CCAA CAGTCCAACAA CGGAACCTGCTGCACAACG ]
[-] EMBL CNS08RAW [ GCGGCTCATCTCGGACGCGA TCCGGCACGGCAACTGCCA CAAGCCGACGATGGAGATGGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTAAAAGGTGTCGCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTGCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAGTAGAGTGGCTCACGGAAAATAATAATAAAAAACTTCCCTTAAAAAGGAAGGGCGCGCGAGCAGCGACGAGTTTTGCCCTGCATTCGCTCAAACCAAATGCAGTATGGTGTCG]
consensusID : consensus_9515#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 748 fasta sequence
[GAATCGCCCCAGGTTTATTTTGATTGAGATAACAACAGTCACCGAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTANCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGNTGGCTACCGCAACCTCAAAAACTAGTCGACTGGACCGGAGTGGCCGGCTGGCCAAGTCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGANAGCTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACTGCGGAGCGGCTCATCTCGCGACGCTGATCCTGGCACNGGATGACATGACATCAAGCCGACGATGGAGATGGCCGACTACATGGCTGCTGGAGAAGCAGATGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCCGGTTCGAGGAGTACAAGGTGTCCGACANGCAGTATGTACAAAGCCCCAAGGGAGTACCCAGGGACTGGTACCGGAANCGAGCAGGTGCTGGAGCTCCCGGGGCAACCGTAACCGCGCTTGATTGGCCAAACNAGANCCCAAACAAAACCGGGAAACCCCTGCTGCGACAAACAGGTGCATTGAATCGACGGCAGACAGAAAAGGGACATACCCCGGACCGAGCGAACACAGCTAATTGCCGGCAGAAATAACGGGCAACNAGAAATTTGGAGACNCGGCAGCAAGGCAGAGGACCCTGGACACAGACG]
[+] EMBL AL695926 [GAATCGCCCCAGGTTTATTTTGATTGAGATAACAACAGTCACCGAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTANCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGNTGGCTACCGCAACCTCAAAAACTAGTCGACTGGACCGGAGTGGCCGGCTGGCCAAGTCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGANAGCTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACTGCGGAGCGGCTCATCTCGCGACGCTGATCCTGGCACNGGATGACATGACATCAAGCCGACGATGGAGATGGCCGACTACATGGCTGCTGGAGAAGCAGATGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCCGGTTCGAGGAGTACAAGGTGTCCGACANGCAGTATGTACAAAGCCCCAAGGGAGTACCCAGGGACTGGTACCGGAANCGAGCAGGTGCTGGAGCTCCCGGGGCAACCGTAACCGCGCTTGATTGGCCAAACNAGANCCCAAACAAAACCGGGAAACCCCTGCTGCGACAAACAGGTGCATTGAATCGACGGCAGACAGAAAAGGGACATACCCCGGACCGAGCGAACACAGCTAATTGCCGGCAGAAATAACGGGCAACNAGAAATTTGGAGACNCGGCAGCAAGGCAGAGGACCCTGGACACAGACG]
consensusID : consensus_9515#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 695 fasta sequence
[CCGCCCACGCGTCCGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTGCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGA]
[+] EMBL BM602733 [CCGCCCACGCGTCCGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTGCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGA]
[+] EMBL BX618539 [ ttGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTG ]
[+] EMBL BX608223 [ ACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCCTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTG ]
[-] EMBL CNS09JIY [ CGGTGACGGAACTGGTAAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGG TACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAACAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTAAAAGGTGTCCGCC ]
[+] EMBL BX615008 [ CGGCGACGGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGGGCACAAACTGTTCAAGGGGCTGGTGCCCCGGTTCGAGGAGTACAAGGGGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9515#1 ------------------------------------------------------------
consensus_9515#3 ------------------------------------------------------------
consensus_9515#0 AAAAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGGAACGAGGCCCGTGAGC 60
consensus_9515#2 ------------------------------------------------------------
consensus_9515#1 -------------------------AGGCAGAATCGCCCCGAGGTNTGAAATGCCGGGAT 35
consensus_9515#3 --------------------------------------------------CCGCCCACGC 10
consensus_9515#0 CGGGCGAAAGAAATGTGGTGTGTTTTGATTGAGTAACAACA--GTACCGAATGCCGGGAT 118
consensus_9515#2 -----GAATCGCCCCAGGTTTATTTTGATTGAGATAACAACAGTCACCGAATGCCGGGAT 55
***
consensus_9515#1 ATT-GGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAAT 94
consensus_9515#3 GTCCGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAAT 70
consensus_9515#0 ATT-GGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAAT 177
consensus_9515#2 ATT-GGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTANCGATGAAT 114
* **** ******** ********************************* ********
consensus_9515#1 CAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGG--CACC 152
consensus_9515#3 CAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGG--CACC 128
consensus_9515#0 CAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGG--CACC 235
consensus_9515#2 CAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGNTGGCTACC 174
*************************************************** * ***
consensus_9515#1 GCAACCTCAAAAAC--ATCGAC-GGACCGGAG-GGCCGGCTGGCCAAG-CTGCGCAAAAC 207
consensus_9515#3 GCAACCTCAAAAAC--ATCGAC-GGACCGGAG-GGCCGGCTGGCCAAG-CTGCGCAAAAC 183
consensus_9515#0 GCAACCTCAAAAAC--ATCGAC-GGACCGGAG-GGCCGGCTGGCCAAG-CTGCGCAAAAC 290
consensus_9515#2 GCAACCTCAAAAACTAGTCGACTGGACCGGAGTGGCCGGCTGGCCAAGTCTGCGCAAAAC 234
************** ***** ********* *************** ***********
consensus_9515#1 GGTGACGGCCACTGGTGAAGCACGAGCGCATCGAA--CTCAACTACCAGGCGGGCGGACG 265
consensus_9515#3 GGTGACGGC-ACTGGTGAAGCACGAGCGCATCGAA--CTCAACTACCAG-CGGGCGGACG 239
consensus_9515#0 GGTGACGGC-ACTGGTGAAGCACGAGCGCATCGAA--CTCAACTACCAG-CGGGCGGACG 346
consensus_9515#2 GGTGACGGC-ACTGGTGAAGCACGAGCGCATCGANAGCTCAACTACCAG-CGGGCGGACG 292
********* ************************ ************ **********
consensus_9515#1 AGGCGCGCGGGTACGGCGGAGCGG-TCATCTCG-GACGC-GATTCCGGCACGG--CGAC- 319
consensus_9515#3 AGGCGCGCGGCTACG-CGGAGCGGCTCATCTCG-GACGC-GAT-CCGGCACGG--CGAC- 292
consensus_9515#0 AGGCGCGCGGCTACG-CGGAGCGGCTCATCTCG-GACGC-GAT-CCGGCACGG--CGAC- 399
consensus_9515#2 AGGCGCGCGGCTACTGCGGAGCGGCTCATCTCGCGACGCTGATCCTGGCACNGGATGACA 352
********** *** ******** ******** ***** *** * ***** * ***
consensus_9515#1 TGCCACCAAGCCGACGATGGAGATGGCCGACTAC-TGGCTGCTGGAGAAGCAGCTGGTGC 378
consensus_9515#3 TGCCAC-AAGCCGACGATGGAGATGGCCGACTAC-TGGCTGCTGGAGAAGCAGCTGGTGC 350
consensus_9515#0 TGCCAC-AAGCCGACGATGGAGATGGCCGACTAC-TGGCTGCTGGAGAAGCAGCTGGTGC 457
consensus_9515#2 TGACATCAAGCCGACGATGGAGATGGCCGACTACATGGCTGCTGGAGAAGCAGATGGTGC 412
** ** *************************** ****************** ******
consensus_9515#1 ACAAACTGTTCAAGGTGCTGGTGCCCC-GGTTCGAGGAGTACAAGGTGTCCGC-ACGC-G 435
consensus_9515#3 ACAAACTGTTCAAGGTGCTGGTGCCCC-GGTTCGAGGAGTACAAGGTGTCCGCCACGC-G 408
consensus_9515#0 ACAAACTGTTCAAGGTGCTGGTGCCCC-GGTTCGAGGAGTACAAGGTGTCCGCCACGC-G 515
consensus_9515#2 ACAAACTGTTCAAGGTGCTGGTGCCCCCGGTTCGAGGAGTACAAGGTGTCCGACANGCAG 472
*************************** ************************ * ** *
consensus_9515#1 TATGTACAAAGCCCC-AAGGAGTACCCGGG--CTGGTACCGGAAGCGAGC-GGTGCTGGA 491
consensus_9515#3 TATGTACAAAGCCCCCAAGGAGTACCCGGG--CTGGTACCGGAAGCGAGC-GGTGCTGGA 465
consensus_9515#0 TATGTACAAAGCCCCCAAGGAGTACCCGGG--CTGGTACCGGAAGCGGGC-GGTGCTGGA 572
consensus_9515#2 TATGTACAAAGCCCCAAGGGAGTACCCAGGGACTGGTACCGGAANCGAGCAGGTGCTGGA 532
*************** * ********* ** ************ ** ** *********
consensus_9515#1 GCTCC-GGGGCAACC-GTACCCGCCGCTGCT--GCCAA--CAGTCCAACAAC-GGAACCT 544
consensus_9515#3 GCTCC-GGGGCAACCCGTACCCGCCGCTGCT--GCCCAACCAGTCCAACAACCGGAACCT 522
consensus_9515#0 GCTCC-GGGGCAACCCGTACCCGCCGCTGCT--GCCCAACCAGTCCAACAACCGGAACCT 629
consensus_9515#2 GCTCCCGGGGCAACC-GTAACCGCGCTTGATTGGCCAAACNAGANCCCAAAC-AAAACCG 590
***** ********* *** **** ** * *** * ** * *** ****
consensus_9515#1 GCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGA 604
consensus_9515#3 GCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGA 582
consensus_9515#0 GCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGA 689
consensus_9515#2 GGAAACCCCTGCTGCGACAAAC-AGGTGCATT-GAATCGACGGCAGACAGAAAAGGGACA 648
* * * ** ** *** * * * * **** * * * * *
consensus_9515#1 GATAGCGGCACAGATTGGCACGG-AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGG 663
consensus_9515#3 GATAGCGGCACAGATTGGCACGGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGG 642
consensus_9515#0 GATAGCGGCACAGATCGGCACGG-AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGG 748
consensus_9515#2 TACCCCGGACCGAGCGAACACAG---CTAATTGCCGGCAGAAATAACGGGCAACNAGA-- 703
* *** * *** * * * * * * * ***** * *
consensus_9515#1 CAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAG 723
consensus_9515#3 CAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGA------- 695
consensus_9515#0 CAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAA 808
consensus_9515#2 ------AATTTGGAGACNCGGCAGCAAGGCAGAGGACCCTGGACACAGACG--------- 748
* *** ** * * **** * * * *
consensus_9515#1 TAGAGTGGCTCACGGAAAATAATAATAAAAAACTTCCCTTAAAAAGGAAGGGCGCGCGAG 783
consensus_9515#3 ------------------------------------------------------------
consensus_9515#0 TAGAGTGGCGCACGGAAAATAATAA-AAAAAACTACCCTTAAAAAGGAAGGGCGCGCGA- 866
consensus_9515#2 ------------------------------------------------------------
consensus_9515#1 CAGCGACGAGTTTTGCCCTGCATTCGCTCAAACCAAATG-CAGTATGGTGTCG 835
consensus_9515#3 -----------------------------------------------------
consensus_9515#0 CAGCGACGAGTTTTGCTCGAAAAAAAAAAAAAAAAAAAGGCCACATG------ 913
consensus_9515#2 -----------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||