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Anopheles gambiae
cluster # 9515 cluster # 9515       Sequences # 17       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9515#0 length = 913 sequences # 9  
consensus_9515#1 length = 835 sequences # 2  
consensus_9515#2 length = 748 sequences # 1  
consensus_9515#3 length = 695 sequences # 5  

consensusID : consensus_9515#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 913
fasta sequence
                              [AAAAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGGAACGAGGCCCGTGAGCCGGGCGAAAGAAATGTGGTGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC-GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC-CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG-CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC-GGC-GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG-AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAAAGGAAGGGCGCGCGACAGCGACGAGTTTTGCTCGAAAAAAAAAAAAAAAAAAAGGCCACATG]

[-] EMBL CNS09IME             [AAAAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGGAACGAGGCCCGTGAGCCGGGCGAAAGAAATGTGGTGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCGATCCATTCGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC GGCACCGCAACCTCAAAAAAATCGACGGACCGGGGGGCCGGCTGGCTCAA CTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGG TACGCGGAGCGGCTCATTTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTAAAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTTTCATTCATTTGTTTAGAGTTta                                                                                                           ]
[+] EMBL CNS09JIX             [                                                  ggCCGTGAGCCGGGCGAAAGAAATGTGGTGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCGATCCATTCGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGGCACCGCAACCTCAAAAACATCGACGGACCGGA GGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGC GAG GGCTCATCTCGGACGCGATCCGGCAC GCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTGTGGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAAAGGAAGGGCGCGCGACAGCGACGAGTTTTGCTCG                            ]
[+] EMBL BM589960             [                                                                            ccgGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTG                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08RAV             [                                                                               GTGTTTTGATTGAGT ACAACAGTACCGAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGAACTGGTGAGGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGC GAG GGCTCATCTCGGACGCGATCCGGCAC GCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGT CTGATGGACGAGGCGAAGAAGGACTACC GGCGGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAGTAGAGTGGGTGAGGGAAAATAATAATAAAAAagttg                                                                     ]
[+] EMBL BM623429             [                                                                            ccgGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGACCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTGAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCCTACCCGGCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTGACTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGGAAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGT                                                                                                                                                            ]
[+] EMBL CNS08NFZ             [                                                                                               ACAACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCGATCCATTCGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACG GGAG GGCTCATCTCGGACGCGATCCGGCAC GCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGCCGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAAAGGAAGGGCGCGCGACAGCGACGAGTTTTGCTAAAAAAAAAAAAAAAAAAAAAGGCCACATG]
[+] EMBL BM582871             [                                                                                               ccgACAGTACCGAATGCCGGGATATTGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGACCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTGAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCCTACCCGGCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAaa                                                                                                                ]
[-] EMBL CNS08NG0             [                                                                                                                                                                                                                  CGATTTTCGGTCCGTCCGC GGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGC CCAACTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGG TACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCAAAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAAAAACCGGAACCTG CTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAAAGGAAGGGCGCGCGAgc                                             ]
[+] EMBL CNS09IMD             [                                                                                                                                                                                                                                                                                              CAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGGGGA  GGCTCATCTCGGACGCGATCCGGCAC GCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTG CTGCACAACGTCTTGATGGACGAGGCGAAGAAGGACTACC GGC GGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGG AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAACTACCCTTAAAACGGAAGGGCGCGCGACAGCGA                                         ]


>consensus_9515#0 AAAAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGGAACGAGGCCCGTGAGC CGGGCGAAAGAAATGTGGTGTGTTTTGATTGAGTAACAACAGTACCGAATGCCGGGATAT TGGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAG GCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAAC CTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCA CTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTAC GCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAG ATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTG CCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTAC CCGGGCTGGTACCGGAAGCGGGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTG CTGCCCAACCAGTCCAACAACCGGAACCTGCTGCACAACGTGCTGATGGACGAGGCGAAG AAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATCGGCACGGAGGCAGCG GTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAG AGTATCATTCATTTGTTTAGAGTTAAAATAGAGTGGCGCACGGAAAATAATAAAAAAAAC TACCCTTAAAAAGGAAGGGCGCGCGACAGCGACGAGTTTTGCTCGAAAAAAAAAAAAAAA AAAAGGCCACATG



consensusID : consensus_9515#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 835
fasta sequence
                              [AGGCAGAATCGCCCCGAGGTNTGAAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGGCGGGCGGACGAGGCGCGCGGGTACGGCGGAGCGG-TCATCTCGGACGCGATTCCGGCACGGCGACTGCCACCAAGCCGACGATGGAGAT-GGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTC-CG-CACGCGTATGTACAAAG-CCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAA-CCGTACCCGCCGCTGCTG-CCAA-CAGTCCAACAA-CGGAACCTGCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAGTAGAGTGGCTCACGGAAAATAATAATAAAAAACTTCCCTTAAAAAGGAAGGGCGCGCGAGCAGCGACGAGTTTTGCCCTGCATTCGCTCAAACCAAATGCAGTATGGTGTCG]

[+] EMBL AL696870             [AGGCAGAATCGCCCCGAGGTNTGAAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGGCGGGCGGACGAGGCGCGCGGGTACGGCGGAGCGG TCATCTCGGACGCGATTCCGGCACGGCGACTGCCACCAAGCCGACGATGGAGAT GGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTC CG CACGCGTATGTACAAAG CCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAA CCGTACCCGCCGCTGCTG CCAA CAGTCCAACAA CGGAACCTGCTGCACAACG                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08RAW             [                                                                                                                                                                                                                                                                                             GCGGCTCATCTCGGACGCGA TCCGGCACGGCAACTGCCA CAAGCCGACGATGGAGATGGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTAAAAGGTGTCGCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTGCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAGTAGAGTGGCTCACGGAAAATAATAATAAAAAACTTCCCTTAAAAAGGAAGGGCGCGCGAGCAGCGACGAGTTTTGCCCTGCATTCGCTCAAACCAAATGCAGTATGGTGTCG]


>consensus_9515#1 AGGCAGAATCGCCCCGAGGTNTGAAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGT AAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTC GCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGA GGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCCACTGGTGAAGCACGAGCGCATCG AACTCAACTACCAGGCGGGCGGACGAGGCGCGCGGGTACGGCGGAGCGGTCATCTCGGAC GCGATTCCGGCACGGCGACTGCCACCAAGCCGACGATGGAGATGGCCGACTACTGGCTGC TGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACA AGGTGTCCGCACGCGTATGTACAAAGCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGA GCGGTGCTGGAGCTCCGGGGCAACCGTACCCGCCGCTGCTGCCAACAGTCCAACAACGGA ACCTGCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATG CGGAGATAGCGGCACAGATTGGCACGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAA AGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTA AAGTAGAGTGGCTCACGGAAAATAATAATAAAAAACTTCCCTTAAAAAGGAAGGGCGCGC GAGCAGCGACGAGTTTTGCCCTGCATTCGCTCAAACCAAATGCAGTATGGTGTCG



consensusID : consensus_9515#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 748
fasta sequence
                              [GAATCGCCCCAGGTTTATTTTGATTGAGATAACAACAGTCACCGAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTANCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGNTGGCTACCGCAACCTCAAAAACTAGTCGACTGGACCGGAGTGGCCGGCTGGCCAAGTCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGANAGCTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACTGCGGAGCGGCTCATCTCGCGACGCTGATCCTGGCACNGGATGACATGACATCAAGCCGACGATGGAGATGGCCGACTACATGGCTGCTGGAGAAGCAGATGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCCGGTTCGAGGAGTACAAGGTGTCCGACANGCAGTATGTACAAAGCCCCAAGGGAGTACCCAGGGACTGGTACCGGAANCGAGCAGGTGCTGGAGCTCCCGGGGCAACCGTAACCGCGCTTGATTGGCCAAACNAGANCCCAAACAAAACCGGGAAACCCCTGCTGCGACAAACAGGTGCATTGAATCGACGGCAGACAGAAAAGGGACATACCCCGGACCGAGCGAACACAGCTAATTGCCGGCAGAAATAACGGGCAACNAGAAATTTGGAGACNCGGCAGCAAGGCAGAGGACCCTGGACACAGACG]

[+] EMBL AL695926             [GAATCGCCCCAGGTTTATTTTGATTGAGATAACAACAGTCACCGAATGCCGGGATATTGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTANCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGNTGGCTACCGCAACCTCAAAAACTAGTCGACTGGACCGGAGTGGCCGGCTGGCCAAGTCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGANAGCTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACTGCGGAGCGGCTCATCTCGCGACGCTGATCCTGGCACNGGATGACATGACATCAAGCCGACGATGGAGATGGCCGACTACATGGCTGCTGGAGAAGCAGATGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCCGGTTCGAGGAGTACAAGGTGTCCGACANGCAGTATGTACAAAGCCCCAAGGGAGTACCCAGGGACTGGTACCGGAANCGAGCAGGTGCTGGAGCTCCCGGGGCAACCGTAACCGCGCTTGATTGGCCAAACNAGANCCCAAACAAAACCGGGAAACCCCTGCTGCGACAAACAGGTGCATTGAATCGACGGCAGACAGAAAAGGGACATACCCCGGACCGAGCGAACACAGCTAATTGCCGGCAGAAATAACGGGCAACNAGAAATTTGGAGACNCGGCAGCAAGGCAGAGGACCCTGGACACAGACG]


>consensus_9515#2 GAATCGCCCCAGGTTTATTTTGATTGAGATAACAACAGTCACCGAATGCCGGGATATTGG TGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTANCGATGAATCAGGCG GAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGNTGGCTACCGCAACC TCAAAAACTAGTCGACTGGACCGGAGTGGCCGGCTGGCCAAGTCTGCGCAAAACGGTGAC GGCACTGGTGAAGCACGAGCGCATCGANAGCTCAACTACCAGCGGGCGGACGAGGCGCGC GGCTACTGCGGAGCGGCTCATCTCGCGACGCTGATCCTGGCACNGGATGACATGACATCA AGCCGACGATGGAGATGGCCGACTACATGGCTGCTGGAGAAGCAGATGGTGCACAAACTG TTCAAGGTGCTGGTGCCCCCGGTTCGAGGAGTACAAGGTGTCCGACANGCAGTATGTACA AAGCCCCAAGGGAGTACCCAGGGACTGGTACCGGAANCGAGCAGGTGCTGGAGCTCCCGG GGCAACCGTAACCGCGCTTGATTGGCCAAACNAGANCCCAAACAAAACCGGGAAACCCCT GCTGCGACAAACAGGTGCATTGAATCGACGGCAGACAGAAAAGGGACATACCCCGGACCG AGCGAACACAGCTAATTGCCGGCAGAAATAACGGGCAACNAGAAATTTGGAGACNCGGCA GCAAGGCAGAGGACCCTGGACACAGACG



consensusID : consensus_9515#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 695
fasta sequence
                              [CCGCCCACGCGTCCGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTGCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGA]

[+] EMBL BM602733             [CCGCCCACGCGTCCGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTGCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATTGGCACGGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGA]
[+] EMBL BX618539             [            ttGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTG                                                                                                                                                                                                          ]
[+] EMBL BX608223             [                                                                                                                                                      ACCGGAGGGCCGGCTGGCCAAGCTGCGCAAAACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCCTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCCGTACCCGCCGCTG                                                                                                                                                                                                          ]
[-] EMBL CNS09JIY             [                                                                                                                                                                                      CGGTGACGGAACTGGTAAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGAGGCGCGCGG TACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAACAGCTGGTGCACAAACTGTTCAAGGTGCTGGTGCCCCGGTTCGAGGAGTAAAAGGTGTCCGCC                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX615008             [                                                                                                                                                                                                                                                                                             CGGCGACGGCCACAAGCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGGGCACAAACTGTTCAAGGGGCTGGTGCCCCGGTTCGAGGAGTACAAGGGGTCCGCCACGCGTATGTACAAAGCCCCCAAGGAGTACCCGGGCTGGTACC                                                                                                                                                                                                                                                         ]


>consensus_9515#3 CCGCCCACGCGTCCGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATT AGCGATGAATCAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCC GCGGCACCGCAACCTCAAAAACATCGACGGACCGGAGGGCCGGCTGGCCAAGCTGCGCAA AACGGTGACGGCACTGGTGAAGCACGAGCGCATCGAACTCAACTACCAGCGGGCGGACGA GGCGCGCGGCTACGCGGAGCGGCTCATCTCGGACGCGATCCGGCACGGCGACTGCCACAA GCCGACGATGGAGATGGCCGACTACTGGCTGCTGGAGAAGCAGCTGGTGCACAAACTGTT CAAGGTGCTGGTGCCCCGGTTCGAGGAGTACAAGGTGTCCGCCACGCGTATGTACAAAGC CCCCAAGGAGTACCCGGGCTGGTACCGGAAGCGAGCGGTGCTGGAGCTCCGGGGCAACCC GTACCCGCCGCTGCTGCCCAACCAGTCCAACAACCGGAACCTGCTGCACAACGTGCTGAT GGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGAGATAGCGGCACAGATTGG CACGGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGGCAGTTTAGTTTTCCCACG TGTACATAGAATAGAGTATCATTCATTTGTTTAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9515#1      ------------------------------------------------------------
consensus_9515#3      ------------------------------------------------------------
consensus_9515#0      AAAAAAAGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGGAACGAGGCCCGTGAGC 60
consensus_9515#2      ------------------------------------------------------------
                                                                                  

consensus_9515#1      -------------------------AGGCAGAATCGCCCCGAGGTNTGAAATGCCGGGAT 35
consensus_9515#3      --------------------------------------------------CCGCCCACGC 10
consensus_9515#0      CGGGCGAAAGAAATGTGGTGTGTTTTGATTGAGTAACAACA--GTACCGAATGCCGGGAT 118
consensus_9515#2      -----GAATCGCCCCAGGTTTATTTTGATTGAGATAACAACAGTCACCGAATGCCGGGAT 55
                                                                          ***     

consensus_9515#1      ATT-GGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAAT 94
consensus_9515#3      GTCCGGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAAT 70
consensus_9515#0      ATT-GGTGCATTTTCTCTTATTAAGTAAAGTGCTTTGGCATCCATCCATTAGCGATGAAT 177
consensus_9515#2      ATT-GGTGAATTTTCTCCTATTAAGTAAAGTGCTTTGGCATCCATCCATTANCGATGAAT 114
                       *  **** ******** ********************************* ********

consensus_9515#1      CAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGG--CACC 152
consensus_9515#3      CAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGG--CACC 128
consensus_9515#0      CAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGCGG--CACC 235
consensus_9515#2      CAGGCGGAAGTAACGAAGCTGATGTCGCAGCTGCGAATTGCGGTCCGTCCGNTGGCTACC 174
                      ***************************************************  *   ***

consensus_9515#1      GCAACCTCAAAAAC--ATCGAC-GGACCGGAG-GGCCGGCTGGCCAAG-CTGCGCAAAAC 207
consensus_9515#3      GCAACCTCAAAAAC--ATCGAC-GGACCGGAG-GGCCGGCTGGCCAAG-CTGCGCAAAAC 183
consensus_9515#0      GCAACCTCAAAAAC--ATCGAC-GGACCGGAG-GGCCGGCTGGCCAAG-CTGCGCAAAAC 290
consensus_9515#2      GCAACCTCAAAAACTAGTCGACTGGACCGGAGTGGCCGGCTGGCCAAGTCTGCGCAAAAC 234
                      **************   ***** ********* *************** ***********

consensus_9515#1      GGTGACGGCCACTGGTGAAGCACGAGCGCATCGAA--CTCAACTACCAGGCGGGCGGACG 265
consensus_9515#3      GGTGACGGC-ACTGGTGAAGCACGAGCGCATCGAA--CTCAACTACCAG-CGGGCGGACG 239
consensus_9515#0      GGTGACGGC-ACTGGTGAAGCACGAGCGCATCGAA--CTCAACTACCAG-CGGGCGGACG 346
consensus_9515#2      GGTGACGGC-ACTGGTGAAGCACGAGCGCATCGANAGCTCAACTACCAG-CGGGCGGACG 292
                      ********* ************************   ************ **********

consensus_9515#1      AGGCGCGCGGGTACGGCGGAGCGG-TCATCTCG-GACGC-GATTCCGGCACGG--CGAC- 319
consensus_9515#3      AGGCGCGCGGCTACG-CGGAGCGGCTCATCTCG-GACGC-GAT-CCGGCACGG--CGAC- 292
consensus_9515#0      AGGCGCGCGGCTACG-CGGAGCGGCTCATCTCG-GACGC-GAT-CCGGCACGG--CGAC- 399
consensus_9515#2      AGGCGCGCGGCTACTGCGGAGCGGCTCATCTCGCGACGCTGATCCTGGCACNGGATGACA 352
                      ********** ***  ******** ******** ***** *** * ***** *   *** 

consensus_9515#1      TGCCACCAAGCCGACGATGGAGATGGCCGACTAC-TGGCTGCTGGAGAAGCAGCTGGTGC 378
consensus_9515#3      TGCCAC-AAGCCGACGATGGAGATGGCCGACTAC-TGGCTGCTGGAGAAGCAGCTGGTGC 350
consensus_9515#0      TGCCAC-AAGCCGACGATGGAGATGGCCGACTAC-TGGCTGCTGGAGAAGCAGCTGGTGC 457
consensus_9515#2      TGACATCAAGCCGACGATGGAGATGGCCGACTACATGGCTGCTGGAGAAGCAGATGGTGC 412
                      ** **  *************************** ****************** ******

consensus_9515#1      ACAAACTGTTCAAGGTGCTGGTGCCCC-GGTTCGAGGAGTACAAGGTGTCCGC-ACGC-G 435
consensus_9515#3      ACAAACTGTTCAAGGTGCTGGTGCCCC-GGTTCGAGGAGTACAAGGTGTCCGCCACGC-G 408
consensus_9515#0      ACAAACTGTTCAAGGTGCTGGTGCCCC-GGTTCGAGGAGTACAAGGTGTCCGCCACGC-G 515
consensus_9515#2      ACAAACTGTTCAAGGTGCTGGTGCCCCCGGTTCGAGGAGTACAAGGTGTCCGACANGCAG 472
                      *************************** ************************  * ** *

consensus_9515#1      TATGTACAAAGCCCC-AAGGAGTACCCGGG--CTGGTACCGGAAGCGAGC-GGTGCTGGA 491
consensus_9515#3      TATGTACAAAGCCCCCAAGGAGTACCCGGG--CTGGTACCGGAAGCGAGC-GGTGCTGGA 465
consensus_9515#0      TATGTACAAAGCCCCCAAGGAGTACCCGGG--CTGGTACCGGAAGCGGGC-GGTGCTGGA 572
consensus_9515#2      TATGTACAAAGCCCCAAGGGAGTACCCAGGGACTGGTACCGGAANCGAGCAGGTGCTGGA 532
                      *************** * ********* **  ************ ** ** *********

consensus_9515#1      GCTCC-GGGGCAACC-GTACCCGCCGCTGCT--GCCAA--CAGTCCAACAAC-GGAACCT 544
consensus_9515#3      GCTCC-GGGGCAACCCGTACCCGCCGCTGCT--GCCCAACCAGTCCAACAACCGGAACCT 522
consensus_9515#0      GCTCC-GGGGCAACCCGTACCCGCCGCTGCT--GCCCAACCAGTCCAACAACCGGAACCT 629
consensus_9515#2      GCTCCCGGGGCAACC-GTAACCGCGCTTGATTGGCCAAACNAGANCCCAAAC-AAAACCG 590
                      ***** ********* *** ****   ** *  *** *   **  *   ***   **** 

consensus_9515#1      GCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGA 604
consensus_9515#3      GCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGA 582
consensus_9515#0      GCTGCACAACGTGCTGATGGACGAGGCGAAGAAGGACTACCGGCGGGAGAAGTATGCGGA 689
consensus_9515#2      GGAAACCCCTGCTGCGACAAAC-AGGTGCATT-GAATCGACGGCAGACAGAAAAGGGACA 648
                      *     *   *    **   ** *** * *   * *    **** *    *  * *   *

consensus_9515#1      GATAGCGGCACAGATTGGCACGG-AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGG 663
consensus_9515#3      GATAGCGGCACAGATTGGCACGGGAGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGG 642
consensus_9515#0      GATAGCGGCACAGATCGGCACGG-AGGCAGCGGTCCCTGGCAGCGGGGAGCAACCAAAGG 748
consensus_9515#2      TACCCCGGACCGAGCGAACACAG---CTAATTGCCGGCAGAAATAACGGGCAACNAGA-- 703
                       *   ***  *       *** *     *   * *    * *     * ***** * *  

consensus_9515#1      CAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAG 723
consensus_9515#3      CAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGA------- 695
consensus_9515#0      CAGTTTAGTTTTCCCACGTGTACATAGAATAGAGTATCATTCATTTGTTTAGAGTTAAAA 808
consensus_9515#2      ------AATTTGGAGACNCGGCAGCAAGGCAGAGGACCCTGGACACAGACG--------- 748
                            * ***    **  *     *    **** * * *  *                 

consensus_9515#1      TAGAGTGGCTCACGGAAAATAATAATAAAAAACTTCCCTTAAAAAGGAAGGGCGCGCGAG 783
consensus_9515#3      ------------------------------------------------------------
consensus_9515#0      TAGAGTGGCGCACGGAAAATAATAA-AAAAAACTACCCTTAAAAAGGAAGGGCGCGCGA- 866
consensus_9515#2      ------------------------------------------------------------
                                                                                  

consensus_9515#1      CAGCGACGAGTTTTGCCCTGCATTCGCTCAAACCAAATG-CAGTATGGTGTCG 835
consensus_9515#3      -----------------------------------------------------
consensus_9515#0      CAGCGACGAGTTTTGCTCGAAAAAAAAAAAAAAAAAAAGGCCACATG------ 913
consensus_9515#2      -----------------------------------------------------
                                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)