These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9516#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1565 fasta sequence [TACTCGCCTCCGCCGTGTAGCAGTCAAACAAAACAAAGCTAGCATTTATATCGATTTTTACACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTGTACGACGATCTGGACACGAAGCAT---GGGCCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG--TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG-CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG-AACGAGTACGACAAACT-GGTGAAGGACCGG-AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC-GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG-ACCTGGGAGGTTGAACGTGCGGGGGGGATGCGGTGGTACTAA-TCTAAATAAGCTAGCATAAATATAACATCCTTTCCC] [+] EMBL CNS08EDF [TACTCGCCTCCGCCGTGTAGCAGTCAAACAAAACAAAGCTAGCATTTATATCGATTTTTACACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTGTACGACGATCTGGACACGAAGCAT GGGCCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGCCTGGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGGAAAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGGGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAG ] [+] EMBL CNS08FLO [ CCTCCGCCGTGTAGCAGTCACACAAAACAAAGCTAGCATTTATATCGATTTTTACACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTGTACGACGATCTGGACACGAAGCATTGCGCGCCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGAC CCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTA ] [+] EMBL BM585211 [ ccgAACAAAGCTAGCATTTGTATCGATTTTTACACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTTTACGACGATCTCGATACGAAGCAT GGGCCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG TTGTGCTTAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAGCT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAACAGCAACAGTA ] [+] EMBL CNS09CAM [ GGGCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGG ] [+] EMBL CNS09R07 [ CCGA AAGGTGG CGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAGTTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCGCAACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTAT ] [+] EMBL CNS09C2J [ CGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACTGGGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCG ] [+] EMBL BM597162 [ ccgAGATTCTTACACCCG TTGTGCTGAAGGCGAAAAAAGAACCAACCGAACAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGAGCGACCACATCACTCATTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAACAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCCAAGAAGTTCAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCC ] [+] EMBL CNS093K3 [ TGCAACGCCCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACC ] [-] EMBL CNS08EDG [ TTCGGTGGTATGCGCAACAGTAACAACAACAAAAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGGGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG ACCTGGGAGGTTGAACGTGCGGGGGGGATGCGGTGGTACTAAGTCTAAATAAGCTAGCATAAATATAACATCCTTTCCC] [+] EMBL CNS09I83 [ GTATGCGCAACAATAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGG ] [-] EMBL CNS08FLP [ CGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCCAGAACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGGACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG ACCTGGGAGGTTGAACGTGCGGGGGGGATGCGGTGGTACTAAGTCTAAATAAGCTAGCATAAATATAACATCC ] [-] EMBL CNS09R08 [ CGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCGGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG ACCTGGGAGGTTGAACGTGCGGGGGGGATGCGGTGGTACTAA TCTAAATAAGCTAGCATAAga ] [-] EMBL CNS09I84 [ GAGGAAGAGTTCCGGCCC GGAAAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCTGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCA ] [+] EMBL BM600010 [ ccgGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCCAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGTTGGGCAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCTAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGTGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGATGTTGATGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACCAAGTACGGCGACGTGGTGACTGTGGTAATACACGAGGTGCCGAACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGGAACCTGGGAGGTTGAACGTGCGGGGG ] [-] EMBL CNS093K4 [ AAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACG ] [-] EMBL CNS09C2K [ AAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAAAATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG ACCTGGGAGGTTGAACGTGCGGG ] consensusID : consensus_9516#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 483 fasta sequence [ATGCCCGAGCTAAAAAGCGCCAGAGGTCGTGCAGCATAAATCATAACAATGGTCTGTACGACGATCTGGACACGAAGCACGGGCCGACAAGTGGGCGGGTGGTCGTCCCGGATTGAAACTGTTCCAGCGCAGCTGGAAGTGAAGAAAGTTAACAACCGGCATAAAACGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGNGAAAAAAGAACAACGAAAGACGCTCCCGTTCTTGTGCAGCTTCCGGCCCGGACGACACATCACTCATTGATCCCTCTTCCGGCATCTGTAGTAAAAAGCGCCAAAGGGCCATCACGGTCACGAACACGAATGTCGAATGCCCAAACCGATCAGTGCGGCGTCACGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGTGCGAACGAGTACGACAAACTGGTGAATGACCGGAAAGCGAAGGAGCCCCG] [+] EMBL AL930565 [ATGCCCGAGCTAAAAAGCGCCAGAGGTCGTGCAGCATAAATCATAACAATGGTCTGTACGACGATCTGGACACGAAGCACGGGCCGACAAGTGGGCGGGTGGTCGTCCCGGATTGAAACTGTTCCAGCGCAGCTGGAAGTGAAGAAAGTTAACAACCGGCATAAAACGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGNGAAAAAAGAACAACGAAAGACGCTCCCGTTCTTGTGCAGCTTCCGGCCCGGACGACACATCACTCATTGATCCCTCTTCCGGCATCTGTAGTAAAAAGCGCCAAAGGGCCATCACGGTCACGAACACGAATGTCGAATGCCCAAACCGATCAGTGCGGCGTCACGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGTGCGAACGAGTACGACAAACTGGTGAATGACCGGAAAGCGAAGGAGCCCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9516#0 TACTCGCCTCCGCCGTGTAGCAGTCAAACAAAACAAAGCTAGCATTTATATCGATTTTTA 60 consensus_9516#1 -----------------------------------------------------ATGCCCG 7 ** consensus_9516#0 CACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTGTA 120 consensus_9516#1 AGCTAAAAA---GCGCCAGA-GGTCG--TGCAGCATAAA-TCATAA-CAATGG-TCTGTA 58 * ***** ** ***** ***** *********** ****** ****** ****** consensus_9516#0 CGACGATCTGGACACGAAGCATGGGCCCGACAAGGTGGCCGGGTGGTCGTCC-GGATTGA 179 consensus_9516#1 CGACGATCTGGACACGAAGCACGGGCC-GACAAG-TGGGCGGGTGGTCGTCCCGGATTGA 116 ********************* ***** ****** *** ************* ******* consensus_9516#0 AACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAG 239 consensus_9516#1 AACTGTTCCAGC-GCAGCTGGAAGTGAAGAAAGTTAACAA--CCGGCATAA-AACGAAAG 172 ************ ******* **************** * *** ***** * ****** consensus_9516#0 CAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGCGAAAAAAG 299 consensus_9516#1 CAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGNGAAAAAAG 232 *************************************************** ******** consensus_9516#0 AACCAACCGAGCAGACGCTCCCGTTCTTG-GCAGCTTCCGGCCCCGGACCGACCACATCA 358 consensus_9516#1 AAC--AACGAA-AGACGCTCCCGTTCTTGTGCAGCTTCCGGCCCGGA--CGAC-ACATCA 286 *** * *** ***************** ************** * **** ****** consensus_9516#0 CTCACTGATCCCTCTTCCGGCATC-GTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCAC 417 consensus_9516#1 CTCATTGATCCCTCTTCCGGCATCTGTAGTAAAAAGCGCCAAAGGGCC-ATCACGGTCAC 345 **** ******************* *********************** *********** consensus_9516#0 GACCACGAATGC--AACGCCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGG 475 consensus_9516#1 GAACACGAATGTCGAATGCCCAAACCGATCAGTGCGGC-GTCAC-GACGACTACAACTGG 403 ** ******** ** ****** ************** ***** *************** consensus_9516#0 GACGTGGTGGACGAGTACGATCCGATGTGGCCGAACGAGTACGACAAACTGGTGAAGGAC 535 consensus_9516#1 GACGTGGTGGACGAGTACGATCCGATGTGTGCGAACGAGTACGACAAACTGGTGAATGAC 463 ***************************** ************************* *** consensus_9516#0 CGGAAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGG 595 consensus_9516#1 CGGAAAGCGAAGGAGCCCCG---------------------------------------- 483 ******************* consensus_9516#0 GAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAAC 655 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 AACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCAC 715 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGA 775 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 CGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCCGGACAGAGTCGCCCGTCGGGTGCG 835 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGT 895 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATG 955 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTC 1015 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATA 1075 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 TCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATA 1135 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATT 1195 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 ATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGAC 1255 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACG 1315 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAG 1375 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 TTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGC 1435 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGGACCTGGGA 1495 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 GGTTGAACGTGCGGGGGGGATGCGGTGGTACTAATCTAAATAAGCTAGCATAAATATAAC 1555 consensus_9516#1 ------------------------------------------------------------ consensus_9516#0 ATCCTTTCCC 1565 consensus_9516#1 ---------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||