These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9528#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1340 fasta sequence [ATTAGTTGCTTCGAACAACCGGAACAGAGCGTGAGA-GAGTGTAGCAATCTTTGTCGGGTGGGCGCGCGTGCTTGTGTTTGTCTCGTCCGCG-AGTTTGAAAGTGTTTGGCCACTTCGAAAGCG-AACAGAATAGACATTTCTAATTGAAGACGAATTGTGCACGGGTGTGAAGTGTGTTTGCCAAAGATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCACCAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGCGCGCCCGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTG-TGCGTGT-GT-GGACGAACT-GGCAT-CCACGTCT-GGCAAT-CATCAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGTTTCCATACGGTTGGGATCGGATCGAGCGCCAGGAAGGCCCTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTCCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGAAGGTGCTGCTGGAA-CGTTCTGTCTCGAGCACGACATCTACATTATACGGGTAAGTTTAACAGTGTAACAAGTGTTTGAAAAAATAAGGACAGAACACTAACGATGATTCCTTATCCACCACAGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCGGTTGTGGCGTCCTGTGCGCTGGTACGCAAACTGCCACCGAAAATGCTACGAAGAATGAGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACCTCACAAACCCATTATCAAATTGCCCGAAAAGTGAGCCACAACCTCTCGTGTGTTTAGTTTTGTGAAACAAGAGGACGTCCTTTAGGAGGCCAGAGCGCAACAACGAGCGAGTGACCTTGCTTGTGCTATAGAATGGCAAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTTGAAATCCTTTAGCCGGTAGCGGGAAACCGGGGGCCGTACGATAAGCTAGGTTAAGCTAGGGATACACAAGGAGCTACGAACGGCTCGAACTTTGACCGATTGCGGTCCACCAAACAGTGCTGCACTGTAGCAAACGATCGTTGGAAAGTGTGGACACGGGTTTTCTGTACTTTTAAACGCAAATTACGTGCAAAATAAAA] [+] EMBL CNS08SWJ [ATTAGTTGCTTCGAACAACCGGAACAGAGCGTGAGA GAGTGTAGCAATCTTTGTCGGGTGGGCGCGCGTGCTTGTGTTTGTCTCGTCCGCG AGTTTGAAAGTGTTTGGCCACTTCGAAAGCG AACAGAATAGACATTTCTAATTGAAGACGAATTGTGCACGGGTGTGAAGTGTGTTTGCCAAAGATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCACCAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGCGCGCCCGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTGTTGCGTGTGGTGGGACGAACTGGGCATGCCACGTGTGGGCAATGCAT ] [+] EMBL CNS092P9 [ GAACAACCGGAACAGAGCGTGAGAGGAGTGTAGCAATCTTTGTCGGGTGGGCGCGCGTGCTTGTGTTTGTCTCGTCCGCG AGTTTGAAAGTGTTTGGCCACTTCGAAAGCG AACAGAATAGACATTTCTAATTGAAGACGAATTGTGCACGGGTGTGAAGTGTGTTTGCCAAAGATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCACCAAGTAGTAGGCCATCATCCAGCGCCATTCCACAACCTTGCCCAACGGAGAGCGCGCGCCCGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTG TGCGTGT GT GGACGAACT GGCAT CCACGTCT GGCAAT CATCAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGTTTCCATACGGTTGGGATCGGATCGAGCGCCAGGAAGGCCCTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTCCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGAAGGTGCTGCTGGAA CGTTCTGTCTCGAGCACGACATCTACATTATACGGGTAAGTTTAACAGTGTAACAAGTGTTTGAAAAAATAAGGACAGAACACTAACGATGATTCCTTATCCACCACAGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCGGTTGTGGCGTCCTGTGCGCTGGTACGCAAACTGCCACCGAAAATGCTACGAAGAATGAGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACCTCACAAACCCATTATCAAATTGCCCGAAAAGTGAGCCACAACCTCT ] [+] EMBL CNS08GBA [ CTTTGTCGGGTGGGCGCGCGTGCTTGTGTTTGTCTCGTCCGCGCAGTTTGAAAGTGTTTGGCCACTTCGAAAGCGCAACAGAATAGACATTTCTAATTGAAGACGAATTGTGCACGGGTGTGAAGTGTGTTTGCCAAAGATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCACCAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGCGCGCCCGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTG TGCGTGT GT GGACGAACT GGCAT CCACGTCT GGCAAT CATCAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGTTTCCATACGGT ] [+] EMBL CNS099KH [ TCGTCCGCG AGTTTGAAAGTGTTTGG CACTTCGAAAGCG AACAGAATAGACATTTCTAATTGAAGACGAATTGTGCACGGGTGTGAAGTGTGTTTGCCAAAGATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCACCAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGCGCGCCCGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTG TGCGTGT GT CGACGAACT GGCA ] [-] EMBL CNS092PA [ CACTTCT GGCAAT CATTAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGTTTCCATACGGTTGGGATCGGATCGAGCGCAAGGAAGGCCCTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGAAGGGGCTGCTGGAAGCGTTTTTTCTCGAGCACAACATCTACATTATACGGGTAAGTGTAACAGTGTAACAAGTGTTTGAAAAAATAAGGACAGAAAACTAACGATGATTCCTTATCCACCACAGGTCGACAGTGCGGACAAATTGAGCCGTTTGGGGCAGTCTCCGGTTGTGGCGTCCTGTGGGCTGGTACGCAAACTGCCACCGAAAATGCTACGAAGAATGAGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGAACTGTGAGCTGTACTGGGACGAACCTCACAAACCCATTATCAAATTGCCCGAAAAGTGAGCAACATCCTCTCGTGTGTTTAGTTTTGTGAAACAAGAGGACGTCCTTTAGGAGGCCAGAGCGCAACAACGAGCGAGTGACCTTGCTTGTGCTATAGAATGGCAAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTTGAAATCCTTTAGCCGGTAGCGGGAAACCGGGGGCCGTACGATAAGCTAGGTTAAGCTAGGGATACACAAGGAGCTACGAACGGCTCGAACTTTGACCGATTGCGGTCCACCAAACAGTGCTGCACTGTAGCAAACGATCGTTGGAAAGTGTGGACACGGGTTTTCTGTACTTTTAAACGCAAATTACGTGCAAAATAAAA] consensusID : consensus_9528#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1235 fasta sequence [TAGTGTGTAGAATCTTTGTCGGGTGGGCGCGCGTGCTTGTGTTTGTCTCGTCCGCGAGTTTGAAAGTGTTTGGCCACTTCGAAAGCGAACAGAATAGACATTTCTAATTGAAGACGAATTGTGCACGGGTGTGAAGTGTGTTTGCCAAAGCATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCACCAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGCGCGCCCGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGTTTCCATACGGTTGGGATCGGATCGAGCGCAAGGAAGGCCCTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGGAGGTGCTGCTGGAAGCGTTCTGTCTCGAGCACGACATCTACATTATACGGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCGGTTGTGGCGTCCTGTGCGCTGGTACGCAAACTGCCACCGAAAATGCTACGAAGAATGAGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACCTCACAAACCCATTATCAAATTGCCCGAAAAGTGAGC-AACATCCTCTCGTGTGTTTAGTTTTGTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGAGCGAGTGACCTTGCTTGTGCTATAGAATGGCAAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTTGAAATCCTTTAGCCGGTAGCGGGAAACCGGGGGCCGTACGATAAGCTAGGTTAAGCTAGGGATACACAAGGAGCTACGAACGGCTCGAACTTTGACCGATTGCGGTCCACCAAACAGTGCTGCACTGTAGCAAACGATCGTTGGAAAGTGTGGACACGGGTTTTCTGTACTTTTAAACGCAAATTACGTGGAAAATAAAACA] [+] EMBL CNS09MNO [TAGTGTGTAGAATCTTTGTCGGGTGGGCGCGCGTGCTTGTGTTTGTCTCGTCCGCGAGTTTGAAAGTGTTTGGCCACTTCGAAAGCGAACAGAATAGACATTTCTAATTGAAGACGAATTGTGCACGGGTGTGAAGTGTGTTTGCCAAAGCATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCACCAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGCGCGCCCGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGTTTCCATACGGTTGGGATCGGATCGAGCGCAAGGAAGGCCCTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGGAGGTGCTGCTGGAAGCGTTCTGTCTCGAGCACGACATCTACATTATACGGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCGGTTGTGGCGTCCTGTGCGCTGGTACGCAAACTGCCACCGAAAATGCTACGAAGAATGAGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACCTCACAAACCCATTATCAAATTGCCCGAAAAGTGAGC AACATCCTCTCGTGTGTTTAGTTTTGTG ] [+] EMBL CNS09C9L [ TTGTGTTTGTCTCGTCCGCGAGTTTGAAAGTGTTTGGCCACTTCGAAAGCGAACAGAATAGACATTTCTAATTGAAGACG TGTGCACGGGTGTGAAGTGT ] [-] EMBL CNS09MNP [ CGCCCGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACCCCATTCCAGAGAAGGTGGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGTTTCCATACGGTTGGGATCGGATCGAGCGCAAGGAAGGCCCTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGGAGGTGCTGCTGGAAGCGTTCTGTCTCGAGCACGACATCTACATTATACGGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCGGTTGTGGCGTCCTGTGCGCTGGTACGCAAACTGCCACCGAAAATGCTACGAAGAATGAGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACCTCACAAACCCATTATCAATTTGCCCGAAAAGTGAGC AACATCCTCTCGTGTGTTTAGTTTTGTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGAGCGAGTGACCTTGCTTGTGCTATAGAATGGCAAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTTGAAATCCTTTAGCCGGTAGCGGGAAACCGGGGGCCGTACGATAAGCTAGGTTAAGCTAGGGATACACAAGGAGCTACGAACGGCTCGAACTTTGACCGATTGCGGTCCACCAAACAGTGCTGCACTGTAGCAAACGATCGTTGGAAAGTGTGGACACGGGTTTTCTGTACTTTTAAACGCAAATTCGGTGG ] [-] EMBL CNS08SWK [ CGAACGGTTTCCATACGGTTGGGATCGGATCGAGCGCAAGGAAGGCCCTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGGAGGTGCTGCTGGAAGCGTTCTGTCTCGAGCACGACATCTACATTATACGGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCGGTTGTGGCGTCCTGTGCGCTGGTACGCAAACTGCCACCGAAAATGCTACGAAGAATGAGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACCTCACAAACCCATTATCAAATTGCCCGAAAAGTGAGC AACATCCTCTCGTGTGTTTAGTTTTGTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGAGCGAGTGACCTTGCTTGTGCTATAGAATGGCAAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTTGAAATCCTTTAGCCGGTAGCGGGAAACCGGGGGCCGTACGATAAGCTAGGTTAAGCTAGGGATACACAAGGAGCTACGAACGGCTCGAACTTTGACCGATTGCGGTCCACCAAACAGTGCTGCACTGTAGCAAACGATCGTTGGAAAGTGTGGACACGGGTTTTCTGTACTTTTAAACGCAAATTACGTGCAAAATAAAACA] [-] EMBL CNS08GBB [ GAGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACCTCACAAACCCATTATCAAATTGCCCGAAAAGTGAGC AACATCCTCTCGTGTGTTTAGTTTTGTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGAGCGAGTGACCTTGCTTGTGCTATAGAATGGCAAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTTGAAATCCTTTAGCCGGTAGCGGGAAACCGGGGGCCGTACGATAAGCTAGGTTAAGCTAGGGATACACAAGGAGCTACGAACGGCTCGAACTTTGACCGATTGCGGTCCACCAAACAGTGCTGCACTGTAGCAAACGATCGTTGGAAAGTGTGGACACGGGTTTTCTGTACTTTTAAACGCAAATTACG ] [-] EMBL CNS09C9M [ GCACTGTGAGCTGTACTGGGACGAACCACACAAACCCGTTATCAAATTGCCCGTAAAGTGAGC AA AACAACCCGTGTGTTTAGTTTTGTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGGGCGAGCGACCTTGCTTGTGCTATAGAATGGCAAATTTTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTTGAAATCCTTTAGCCGGTAGCGGGAAACCGGGGGCCGTACGATAAGCTAGGTTAAGCTAGGGATACACAAGGAGCTACGAACGGCTCGAACTTTGACCAATTGCGGTCCACCAAACAGTGCTGCACTGTAGCAAACGATCGTTGGAAAGTGTGGACA ] [-] EMBL CNS099KI [ ctgcccTTGCCCGAAAAGTGAGCAAACATCCTCTCGTGTGTTTAGTTTTGTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGAGCGAGTGACCTTGCTTGTGCTATAGAATGGCAAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTTGAAATCCTTTAGCCGGTAGCGGGAAACCGGGGGCCGTACGATAAGCTAGGTTAAGCTAGGGATACACAAGGAGCTACGAACGGCTCGAACTTTGACCGATTGCGGTCCACCAAACAGTGCTGCACTGTAGCAAACGATCGTTGGAAAGTGTGGACACGGGTTTTCTGTACTTTTAAACGCAAATTA ] consensusID : consensus_9528#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1000 fasta sequence [CCGGGAACAGCAATCTTTGTCGGGTGGGCGCGCGTGCTTGTGTTTGTCTCGTCCGCGAGTTAGAAAGTGTTTAGCGAACAGAATAGACATTTCGAATTAAAGACGTGTGCACGGGTGTGAAGTGTATTTGCCAAAGATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCACCAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGGGCGCGCGTTTGAGCTTGGACTACTTGGGGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAGTCCAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGACGATGGAGTCGAACGGTTTCCACACGGTCGGGATCGGATCGAGCGCAAGGAAGGCACTGTTGAGCGCGCTGGAGGATAAACGGCTGGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGGAGGTGCTGCTGGAAGCGTTCTGTCTCGAGCACGACATCTACATTATACGGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCAGGTTGTGGCGTCCTGTGCCTTGGTACGCAAGCTGCCACCAAAAATGCTACGAAGAATGACGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGCACTGTGAAGCTTGTACTGGGGACGAAACCTCCCAAACCCCGTTATCCAAATTGCCCCGAAAAGGGAGCAACACTCCCCCCCGGTGGGGTTAAATTTTTGGGGAAAACCAAAAAGGACGTCCCCTTTATGGGAAACCCAAAAGGGCCAACAAAAGGGGGGAGCGGACCCTTGTCCTTTAGGGCTTTAAAAAAGGGGCA] [+] EMBL BM624956 [CCGGGAACAGCAATCTTTGTCGGGTGGGCGCGCGTGCTTGTGTTTGTCTCGTCCGCGAGTTAGAAAGTGTTTAGCGAACAGAATAGACATTTCGAATTAAAGACGTGTGCACGGGTGTGAAGTGTATTTGCCAAAGATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCACCAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGGGCGCGCGTTTGAGCTTGGACTACTTGGGGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAGTCCAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGACGATGGAGTCGAACGGTTTCCACACGGTCGGGATCGGATCGAGCGCAAGGAAGGCACTGTTGAGCGCGCTGGAGGATAAACGGCTGGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGGAGGTGCTGCTGGAAGCGTTCTGTCTCGAGCACGACATCTACATTATACGGGTCGA ] [+] EMBL BM657861 [ cCGCCATTTCACAACCTTGCCCAACGGAGAGCGCGCGCACGTTTGAGCTTGGACTACTTGTGGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGACGATGGAGTCGAACGGTTTCCACACGGTTGGGATCGGATCGAGCGCAAGGAAGGCATTGTTGAGCGCGCTGGAGGATAAACGGTTAGTCGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGCTGTACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGGAGGTGCTGCTGGAAGCGTTCTGCCTCGAGCACGACATCTACATTATACGGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCAGGTTGTGGCGTCCTGTGCCTTGGTACGCAAGCTGCCACCAAAAATGCTACGAAGAATGACGCAGCGCCTTTCGTCGATCTGAAAGCATCCTAATCGAGCACTGTGAAGCTTGTACTGGGGACGAAACCTCCCAAACCCCGTTATCCAAATTGCCCCGAAAAGGGAGCAACACTCCCCCCCGGTGGGGTTAAATTTTTGGGGAAAACCAAAAAGGACGTCCCCTTTATGGGAAACCCAAAAGGGCCAACAAAAGGGGGGAGCGGACCCTTGTCCTTTAGGGCTTTAAAAAAGGGGCA] consensusID : consensus_9528#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 908 fasta sequence [AGAATTCCCGAGGNTCGTACATGGGTCTGAAGGCATNGGATAAGGAAAGATGATNGAGTCGAACGGTTTCCACACGGTTGGGATCGGATCGAGCGCGAGGAAGGCACTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTCCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGGAGGTGCTGCTGGAAGCATTCTGTCTCGAGCACGACATCTACATTATACGGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCGGTTGTGGCGTCCTGTGCGCTGGTACGCAAGCTGCCACCGAAAATGCTACGTAGAATGAGCAGC-GCCTTCCGACGATCTTGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACC-ACAC-AAACCCGTTATCAAATTGCCCGAAAAGTGAG-CAACACATCCCGTGTGTTTAGTTTGTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGGGCGAGCGACCTTGCTTGTGCTATAGAATGGCNAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTNTGAAATCCCTTTANCCGGNTAGCCGGCGCAAACCGGTNGGCCGTACGCATAAGCTAGGTTAAGCTAGCGGATACACAAGGAGCTACGAACCGGTCGCAACTTTGACCANTTGGCGGTCCACCAAACAGGTGCTGCACTGTAGCCAAACGGACTCGGTTGGAAAANGTTGTGGCACACCGGCATCTCTACTCGTCAACTTTAAGAGCTAATTACGTGCACACATTAAAACCACGNAAAATCACCACACATNAACAC] [+] EMBL AL931368 [AGAATTCCCGAGGNTCGTACATGGGTCTGAAGGCATNGGATAAGGAAAGATGATNGAGTCGAACGGTTTCCACACGGTTGGGATCGGATCGAGCGCGAGGAAGGCACTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTCCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAGGAGGTGCTGCTGGAAGCATTCTGTCTCGAGCACGACATCTACATTATACGGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCGGTTGTGGCGTCCTGTGCGCTGGTACGCAAGCTGCCACCGAAAATGCTACGTAGAATGAGCAGC GCCTTCCGACGATCTTGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACC ACAC AAACCCGTTATCAAATTGCCCGAAAAGTGAG CAACACATCCCGTGTGTTTAGTTTGTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGGGCGAGCGACCTTGCTTGTGCTATAGAATGGCNAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGGGCCATAAGTTNTGAAATCCCTTTANCCGGNTAGCCGGCGCAAACCGGTNGGCCGTACGCATAAGCTAGGTTAAGCTAGCGGATACACAAGGAGCTACGAACCGGTCGCAACTTTGACCANTTGGCGGTCCACCAAACAGGTGCTGCACTGTAGCCAAACGGACTCGGTTGGAAAANGTTGTGGCACACCGGCATCTCTACTCGTCAACTTTAAGAGCTAATTACGTGCACACATTAAAACCACGNAAAATCACCACACATNAACAC] [+] EMBL BX619677 [ CACCGAAAATGCTACGTAGAATGAGCAGCGGCCTTCCGACGATC TGAAAGCATCCTAATCGAGCACTGTGAGCTGTACTGGGACGAACCNACACAAAACCCGTTATCAAATTGCCCGAAAAGTGAGCCAACcac ] consensusID : consensus_9528#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 372 fasta sequence [CCGCCCACGCGTCCGGGAGAGCGGGCACGCGTTTGAGCTTGGACTACTTGTGGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGTTTCCACACGGTTGGGATCGGATCGAGCGCGAGGAAGGCACTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTCCTGGCACCGTTCGACGACCACGGTGAGA] [+] EMBL BM625915 [CCGCCCACGCGTCCGGGAGAGCGGGCACGCGTTTGAGCTTGGACTACTTGTGGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGTGGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAGTCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGTTTCCACACGGTTGGGATCGGATCGAGCGCGAGGAAGGCACTGTTGAGCGCGCTGGAGGATAAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTGTACAATTTTTGCTTCCTGGCACCGTTCGACGACCACGGTGAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9528#1 ----------------------------------TAGTGTGTAGAATCTTTGTCGGGTGG 26 consensus_9528#3 ------------------------------------------------------------ consensus_9528#2 ----------------------------------CCGGGAACAGCAATCTTTGTCGGGTG 26 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 ATTAGTTGCTTCGAACAACCGGAACAGAGCGTGAGAGAGTGTAGCAATCTTTGTCGGGTG 60 consensus_9528#1 GCGCGCGTGCTTGTGTTTGTCTCGTCCGCGAGTTTGAAAGTGTTTGGCCACTTCGAAAGC 86 consensus_9528#3 ------------------------------------------------------------ consensus_9528#2 GGCGCGCGTGCTTGTGTTTGTCTCGTCCGCGAGTTAGAAAGTGTTT------------AG 74 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 GGCGCGCGTGCTTGTGTTTGTCTCGTCCGCGAGTTTGAAAGTGTTTGGCCACTTCGAAAG 120 consensus_9528#1 GAACAGAATAGACATTTCTAATTGAAGACGAATTGTGCACGGGTGTGAAGTGTGTTTGCC 146 consensus_9528#3 ------------------------------------------------------------ consensus_9528#2 CGAACAGAATAGACATTTCGAATTAAAGACG---TGTGCACGGGTGTGAAGTGTATTTGC 131 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 CGAACAGAATAGACATTTCTAATTGAAGACGAATTGTGCACGGGTGTGAAGTGTGTTTGC 180 consensus_9528#1 AAAGCATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCAC 206 consensus_9528#3 ------------------------------------------------------------ consensus_9528#2 CAAAGATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCAC 191 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 CAAAGATAACAAACGGCACCTTTCTCGTTTGTTTAGAGAACGAGTTGCAATTGCAAGCAC 240 consensus_9528#1 CAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGCGCGCC 266 consensus_9528#3 ------------------------------------------------------------ consensus_9528#2 CAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGGGCGCG 251 consensus_9528#4 -------------------------------CCGCCCACGCGTCCGGGAGAGCGGGCACG 29 consensus_9528#0 CAAGTAGTAGGCCATCATCCAGCGCCATTTCACAACCTTGCCCAACGGAGAGCGCGCGCC 300 consensus_9528#1 CGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGT 326 consensus_9528#3 ------------------------------------------------------------ consensus_9528#2 CGTTTGAGCTTGGACTACTTGGGGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGT 311 consensus_9528#4 CGTTTGAGCTTGGACTACTTGTGGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGT 89 consensus_9528#0 CGTTTGAGCTTGGACTACTTGTAGTGGAAGGGTGAAAGTAGACGGCATTCCAGAGAAGGT 360 consensus_9528#1 GGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAG 386 consensus_9528#3 -------------------------------------------------AGAATTCCCGA 11 consensus_9528#2 GGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAG 371 consensus_9528#4 GGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAG 149 consensus_9528#0 GGTGCATCACGTGCTTGTGCGTGTGTGGACGAACTGGCATCCACGTCTGGCAATCATCAG 420 *** * consensus_9528#1 TCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGT 446 consensus_9528#3 --GGNTCGTAC-ATGGGTCTGAAGGCATNGGAT-AAGGAAAGATGATNGAGTCGAACGGT 67 consensus_9528#2 TCCAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGACGATGGAGTCGAACGGT 431 consensus_9528#4 TCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGT 209 consensus_9528#0 TCAAAGCGTACCATGGTCCTGAAGGCATCGGATGAAGGAAAGATGATGGAGTCGAACGGT 480 ***** **** ********** **** ********* *** ************ consensus_9528#1 TTCCATACGGTTGGGATCGGATCGAGCGCAAGGAAGGCCCTGTTGAGCGCGCTGGAGGAT 506 consensus_9528#3 TTCCACACGGTTGGGATCGGATCGAGCGCGAGGAAGGCACTGTTGAGCGCGCTGGAGGAT 127 consensus_9528#2 TTCCACACGGTCGGGATCGGATCGAGCGCAAGGAAGGCACTGTTGAGCGCGCTGGAGGAT 491 consensus_9528#4 TTCCACACGGTTGGGATCGGATCGAGCGCGAGGAAGGCACTGTTGAGCGCGCTGGAGGAT 269 consensus_9528#0 TTCCATACGGTTGGGATCGGATCGAGCGCCAGGAAGGCCCTGTTGAGCGCGCTGGAGGAT 540 ***** ***** ***************** ******** ********************* consensus_9528#1 AAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTG 566 consensus_9528#3 AAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTG 187 consensus_9528#2 AAACGGCTGGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTG 551 consensus_9528#4 AAGCGGCTAGTTGTTGGGTTGGCCAGTGCCGTACGCAGCTTGGCGGCCAATCCGGAGTTG 329 consensus_9528#0 AAGCGGCTAGTTGTTGGGTTGGCCAGTCCCGTACGCAGCTTGGCGGCCAATCCGGAGTTG 600 ** ***** ****************** ******************************** consensus_9528#1 TACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAG 626 consensus_9528#3 TACAATTTTTGCTTCCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAG 247 consensus_9528#2 TACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAG 611 consensus_9528#4 TACAATTTTTGCTTCCTGGCACCGTTCGACGACCACGGTGAGA----------------- 372 consensus_9528#0 TACAATTTTTGCTTTCTGGCACCGTTCGACGACCACGGTGAGAGTGGTAGCCACATGCAG 660 ************** **************************** consensus_9528#1 GAGGTGCTGCTGGAAGCGTTCTGTCTCGAGCACGACATCTACATTATACGGGT------- 679 consensus_9528#3 GAGGTGCTGCTGGAAGCATTCTGTCTCGAGCACGACATCTACATTATACGGGT------- 300 consensus_9528#2 GAGGTGCTGCTGGAAGCGTTCTGTCTCGAGCACGACATCTACATTATACGGGT------- 664 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 AAGGTGCTGCTGGAA-CGTTCTGTCTCGAGCACGACATCTACATTATACGGGTAAGTTTA 719 consensus_9528#1 ------------------------------------------------------------ consensus_9528#3 ------------------------------------------------------------ consensus_9528#2 ------------------------------------------------------------ consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 ACAGTGTAACAAGTGTTTGAAAAAATAAGGACAGAACACTAACGATGATTCCTTATCCAC 779 consensus_9528#1 -------CGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCC-GGTTGTGGCGTCC 731 consensus_9528#3 -------CGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCC-GGTTGTGGCGTCC 352 consensus_9528#2 -------CGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCCAGGTTGTGGCGTCC 717 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 CACAGGTCGACAGTGCGGACAAATTGAGCCGTTTGGTGCAGTCTCC-GGTTGTGGCGTCC 838 consensus_9528#1 TGTGCGCTGGTACGCAAACTGCCACCGAAAATGCTACGAAGAATGA-GCAGCGCCTTTCG 790 consensus_9528#3 TGTGCGCTGGTACGCAAGCTGCCACCGAAAATGCTACGTAGAATGA-GCAGCGCCTTCCG 411 consensus_9528#2 TGTGCCTTGGTACGCAAGCTGCCACCAAAAATGCTACGAAGAATGACGCAGCGCCTTTCG 777 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 TGTGCGCTGGTACGCAAACTGCCACCGAAAATGCTACGAAGAATGA-GCAGCGCCTTTCG 897 consensus_9528#1 TCGATCT-GAAAGCATCCTAATCGAGCACTGTGAG--CTGTACTGGGA--CGAACCTCAC 845 consensus_9528#3 ACGATCTTGAAAGCATCCTAATCGAGCACTGTGAG--CTGTACTGGGA--CGAACCACAC 467 consensus_9528#2 TCGATCT-GAAAGCATCCTAATCGAGCACTGTGAAGCTTGTACTGGGGACGAAACCTCCC 836 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 TCGATCT-GAAAGCATCCTAATCGAGCACTGTGAG--CTGTACTGGGA--CGAACCTCAC 952 consensus_9528#1 AAACCC-ATTATC-AAATTGCCC-GAAAAGTGAGCAACATCCTCTCGTGTGTTTAGTTTT 902 consensus_9528#3 AAACCC-GTTATC-AAATTGCCC-GAAAAGTGAGCAACA-CATCCCGTGTGTTTAGTTT- 522 consensus_9528#2 AAACCCCGTTATCCAAATTGCCCCGAAAAGGGAGCAACA-CTCCCCCCCGGTGGGGTTAA 895 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 AAACCC-ATTATC-AAATTGCCCGAAAAGTGAGCCACAA-CCTCTCGTGTGTTTAGTTTT 1009 consensus_9528#1 GTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGAGCGAGTGACCTTGCT 962 consensus_9528#3 GTGAAACAAGAGGACGTCCTTTAGGAAGCCAGAGCGCAACAACGGGCGAGCGACCTTGCT 582 consensus_9528#2 ATTTTTGGGGAAAAC--CAAAAAGGACGTCCCCTTTATGGGAAACCCAAAAGGGCCAACA 953 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 GTGAAACAAGAGGACGTCCTTTAGGAGGCCAGAGCGCAACAACGAGCGAGTGACCTTGCT 1069 consensus_9528#1 TGTGCTATAGAATGGCAAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGG 1022 consensus_9528#3 TGTGCTATAGAATGGCNAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGG 642 consensus_9528#2 AAAGGGGGGAGCGGACCCTTGTCCTTTAGGGCTTTAAAAAAGGGGCA------------- 1000 consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 TGTGCTATAGAATGGCAAATATTCTCCACTTACCTAAGAGCTAACTAGGCCAACTTCAGG 1129 consensus_9528#1 GCCATAAGTTT-GAAATCC-TTTAGCCGGT-AGCGGG---AAACCGG-GGGCCGTACG-A 1074 consensus_9528#3 GCCATAAGTTNTGAAATCCCTTTANCCGGNTAGCCGGCGCAAACCGGTNGGCCGTACGCA 702 consensus_9528#2 ------------------------------------------------------------ consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 GCCATAAGTTTGAAATCCTTTAGCCGGTAGCGGGAAACCGGGGGCCGTACGATAAGCTAG 1189 consensus_9528#1 TAAGCTAGGTTAAGCTAG-GGATACACAAGGAGCTACGAACGGCTCG-AACTTTGACCGA 1132 consensus_9528#3 TAAGCTAGGTTAAGCTAGCGGATACACAAGGAGCTACGAACCGGTCGCAACTTTGACCAN 762 consensus_9528#2 ------------------------------------------------------------ consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 GTTAAGCTAGGGATACACAAGGAGCTACGAACGGCTCGAACTTTGACCGATTGCGGTCCA 1249 consensus_9528#1 TTG-CGGTCCACCAAACAG-TGCTGCACTGTAGC-AAACGATC---GTTGGAAAGTGTGG 1186 consensus_9528#3 TTGGCGGTCCACCAAACAGGTGCTGCACTGTAGCCAAACGGACTCGGTTGGAAAANGTTG 822 consensus_9528#2 ------------------------------------------------------------ consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 CCAAACAGTGCTGCACTGTAGCAAACGATCGTTGGAAAGTGTGGACACGGGTTTTCTGTA 1309 consensus_9528#1 ----ACACGGGT-TTTCTGTAC-----TTTTAAACGCAAATTACGTGGAAA--ATAAAAC 1234 consensus_9528#3 TGGCACACCGGCATCTCTACTCGTCAACTTTAAGAGCTAATTACGTGCACACATTAAAAC 882 consensus_9528#2 ------------------------------------------------------------ consensus_9528#4 ------------------------------------------------------------ consensus_9528#0 CTTTTAAACGCAAATTACGTGCAAAATAAAA----------------------------- 1340 consensus_9528#1 A------------------------- 1235 consensus_9528#3 CACGNAAAATCACCACACATNAACAC 908 consensus_9528#2 -------------------------- consensus_9528#4 -------------------------- consensus_9528#0 -------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||