These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9548#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1579 fasta sequence [CCGGGTGAAGCGGCACGAGCCACCAATCGTGGTGGATAACAGTGAAGCTGAGGACGCATCGGGCGATGGCGGAGTGGCGATCGGGGAGGAATCCACCATTGGCGAGGAGGCACGGCGGAAGGTGTTCGATGGGCCGACGGTCGAGGGCAGTGGCGAAGAGACGGACCACAGTGCTCGTGTGATGGCTGCGGAGGTCGAGGAGGATGGCGAAGGTGATGAGGACGTCACGGACGATGGCAGTGGCAGTGGGGGCGGTTTTATGGTTGACGTCGCACGGGTCCATGATCTCGAGCCGACCACGAGCAGCTCGACAGAGACGCCGCTCGACGAGGAGGAACCGGAAGAGGCACCGATGGGCATGCCCAACCTGCACGACGGGCTCGGCATCTTCCGGGACGACAAGGAGGAGGACGACCTCGAACCGACCTCGGAAGAGACCACCTCGGAGGGCACGAACGCACGCGTCATGGTCGGTGCGCCCGGCATTATGAAGACGGCCAGCGATGGAACGGCGGCCGGTGATGGATCGTCAGAAACTCCGCTCGTCGCTGGCGGAGCGCTCGTACCTCCACAGTCAGAGGAAGATAACCAGAAGACCTACCTGCTGCTCGCCATCCTGGGCATCATCGTCGTGTCGCTCATCGTGATGGTGGTGTGCAAGCGCAAGCCGGACTCGCGCAACCGCCGCGGCAAGTACGACGTGGAGACGGCAAACGGTACCGGGCGCGAGATGAAGGAGATGAACAAGAACCTGCTGGGCGAGAAGGGACCGGCCGACCGGAACGGGCGCGGTGTACCCGAGCAGACGCCGCTCATGTCGCCGGACAAAAACGACTACGAGCGGGTGTTCGGCGACCCGCAGAAGACCGCCTTCAGCCCGGTGAAGCCCGTGCGCACCTCGCTCGAGAAGCCGATGGAATCGTTCAAACCGATCGCGGCCGAACGGCGCACGAACGATGCGGCCGGTGCCCCCGCGGACAACAACAACACGGCCACGCTGCCGAACGGCAACGGTGCGCTGCAGAACGGTGACGGCCCGGCCGGTGTGCACCGACAGCCGGACCACCCGAACCACCACCAACAACAAGTGCCATCAACGAACGGGGACGTGACCGATCCGGACGGCCACCTGGCGGTGCCGCTCGAGTCGCCCCGCTCGAAACGCTACAGCCCCATCTACGTGCCTACCTCGCCGAAATCGGACCGGTACAGCCCGGTGTACTCGCCGGAGACGGGCCGCGTGAAGATCAAGATGACCGAGACGCCCAAACCGAAGACGCCGATCCTGGTGACGCGAAGCCGGTCGCGGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGGCACGGTTGGGACGGGGGCGACCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCGGGAGCCGTCGGGTCGTCGTGACTCGTGACCATGTGTGACGTACGCCGGCGTTATCTTGCGCGGACNGGGGTTGTGTGTGCCTTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGCCTCGACCTGATCCTGCGAACCTTCCAACCGCCCGGATGGAATG] [+] EMBL BM652304 [CCGGGTGAAGCGGCACGAGCCACCAATCGTGGTGGATAACAGTGAAGCTGAGGACGCATCGGGCGATGGCGGAGTGGCGATCGGGGAGGAATCCACCATTGGCGAGGAGGCACGGCGGAAGGTGTTCGATGGGCCGACGGTCGAGGGCAGTGGCGAAGAGACGGACCACAGTGCTCGTGTGATGGCTGCGGAGGTCGAGGAGGATGGCGAAGGTGATGAGGACGTCACGGACGATGGCAGTGGCAGTGGGGGCGGTTTTATGGTTGACGTCGCACGGGTCCATGATCTCGAGCCGACCACGAGCAGCTCGACAGAGACGCCGCTCGACGAGGAGGAACCGGAAGAGGCACCGATGGGCATGCCCAACCTGCACGACGGGCTCGGCATCTTCCGGGACGACAAGGAGGAGGACGACCTCGAACCGACCTCGGAAGAGACCACCTCGGAGGGCACGAACGCACGCGTCATGGTCGGTGCGCCCGGCATTATGAAGACGGCCAGCGATGGAACGGCGGCCGGTGATGGATCGTCAGAAACTCCGCTCGTCGCTGGCGGAGCGCTCGTACCTCCACAGTCAGAGGAAGATAACCAGAAGACCTACCTGCTGCTCGCCATCCTGGGCATCATCGTCGTGTCGCTCATCGTGATGGTGG ] [+] EMBL BM628427 [ ccgAGACGGCCAGCGATGGAACGGCGGCCGGTGATGGATCGTCAGAAACTCCGCTCGTCGCTGGCGGAGCGCTCGTACCTCCACAGTCAGAGGAAGATAACCAGAAGACCTACCTGCTGCTCGCCATCCTGGGCATCATCGTCGTGTCGCTCATCGTGATGGTGGTGTGCAAGCGCAAGCCGGACTCGCGCAACCGCCGCGGCAAGTACGACGTGGAGACGGCAAACGGTACCGGGCGCGAGATGAAGGAGATGAACAAGAACCTGCTGGGCGAGAAGGGACCGGCCGACCGGAACGGGCGCGGTGTACCCGAGCAGACGCCGCTCATGTCGCCGGACAAAAACGACTACGAGCGGGTGTTCGGCGACCCGCAGAAGACCGCCTTCAGCCCGGTGAAGCCCGTGCGCACCTCGCTCGAGAAGCCGATGGAATCGTTCAAACCGATCGCGGCCGAACGGCGCACGAACGATGCGGCCGGTGCCCCCGCG ] [+] EMBL BX625670 [ CGACCGGAACGGGCGCGGTGTACCCGAGCAGACGCCGCTCATGTCGCCGGACAAAAACGACTACGAGCGGGTGTTCGGCGACCCGCAGAAGACCGCCTTCAGCCCGATGAAGCCCGTGCGCACCTCGCTCGAGAAGCCGATGGAATCGTTCAAACCGATCGCGGCCGAACGGCGCACGAACGATGCGGCCGGTGCCCCCGCGGACAACAACAACACGGCCACGCTGCCGAACGGCAACGGTGCGCTGCAGAACGGTGACGGCCCGGCCGGTGTGCACCGACAGCCGGACCACCCGAACCACCACCAACAACAAGTGCCATCAACGAACGGGGACGTGACCGATCCGGACGGCCACCTGGCGGTGCCGCTCGAGTCGCCCCGCTCGAAACGCTACAGCCCCATCTACGTGCCTACCTCGCCGAAATCGGACCGGTACAGCCCGGTGTACTCGCCGGAGACGGGCCGCGTGAAGATCAAGATGACCGAGACGCCCAAACCGAAGACGCCGATCCTGGTGACGCGAAGCCGGTCGCGGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGGCACGGTTGGGACGGGGGCGACCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCGGGAGCCGTCGGGTCGTCGTGACTCGTGACCATGTGTGACGTACGCCGGCGTTATCTTGCGCGGACNGGGGTTGTGTGTGCCTTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGCCTCGACCTGATCCTGCGAACCTTCCAACCGCCCGGAT ] [+] EMBL BX621506 [ GACTCCTGACCATGTGTGACGTACGCCGGCGTTATCTTGCGCGGACGGGGGTTGTGTGTGCCTTGNTTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGCCTCGACCTGATACTGCGAACCTTC TCCGCCCCGATGGAATG] consensusID : consensus_9548#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 742 fasta sequence [CCGCCTAATCCAAACATGAGGAAACATTCCCATCTTCTTGCTGTGCACCGAGCTAGTCCGCTAATATTTAATTCCCGAAGGATTATAACAG--AAAACACGCCAGAATGTCCACGAAATCATCCAACAGCATTGACAGCCGCACCGAGCTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG-GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACC-AATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAA-GGAGTCCGCCACGAACAG-CACGTCCAGCTTGGGCGAAAGATGCGG] [+] EMBL BM617839 [CCGCCTAATCCAAACATGAGGAAACATTCCCATCTTCTTGCTGTGCACCGAGCTAGTCCGCTAATATTTAATTCCCGAAGGATTATAACAG AAAACACGCCAGAATGTCCACGAAATCATCCAACAGCATTGACAGCCGCACCGAGTTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCGTGAAACGGTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACGACCAGCAAAACCACCAACTCTAAGGGGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAGATCATCCATCACCTCGATGGGGGGCGTCAGCGGCTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACTAAGGACGATTCGAGCGACAATCAGGCCGGTGGGACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCACCACCCCGGCTGCGGTGGGCGCATCTGCCGGGACGGATGTTGGTGGTGGAGGTGCGTTGATAAATTCCGACAACAGATCGTCGCTCGCCAACCGAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCCGCGGGACGGTTTTGAACCGAGCCACTACACCCACCAAGGGAGTCCGCCACCAACAGCCACGCCCATCTTGGGCGAAAGATGCGG] [+] EMBL BM585937 [ ccgATTCCCGAAGAATTATAACAGAAAAAACACGCCAGAATGTCCACGAAATCATCCAACAGCATTGACAGCCGCACCGAGCTGGCCGATCTTGTTAAAAGAAAGGCAGAAATTTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAAGCGGAGCGGCTGTTTTCCAAATCATCCATCACCTCGATGGCGGCCGTCAGCGGCTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGTACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTTGCCGCATC ] [+] EMBL AGA281921 [ AGCCGCACCGAGCTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCCAAATCAT ] [+] EMBL AGA282695 [ AGCCGCACCGAGCTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGA ] [+] EMBL AGA282837 [ CTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCTTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGTCAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACCATTCGAGCGACAATCAGGCCGGTGGCAC ] [+] EMBL AGA282840 [ CTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCTTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGC ] [-] EMBL AGA281217 [ GGAGCGACTGTTTTCGAAATCATCCATCACATCGAT GTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACC AATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAA GGAGTCCGCCACGAACAG CACGTCCAGCTTG ] [-] EMBL AGA280225 [ ttGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACC AATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAA GGAGTCCGCCACGAACAG CACGTCCAGCTTG ] [-] EMBL AGA281066 [ CGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACC AATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAA GGAGTCCGCCACGAACAG CACGTCCAGCTTG ] consensusID : consensus_9548#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence [CCGTTTGTTTCAATGGCCAACCTAATGTTTGTGTACCTTTCTGCGTCCAGGAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACCTCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGTACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCACGTCCAGCTT] [+] EMBL BM597449 [CCGTTTGTTTCAATGGCCAACCTAATGTTTGTGTACCTTTCTGCGTCCAGGAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACCTCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGTACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCACGTCCAGCTT] consensusID : consensus_9548#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 583 fasta sequence [GAATGAGAGTGGGTGGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGCTAATGCACAGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCACGTCC] [+] EMBL AGA282973 [GAATGAGAGTGGGTGGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGCTAATGCACAGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAA ] [-] EMBL AGA281367 [ AATGAGAGTGGGTGGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGCTAATGCACAGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACAC GAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCACGTCC] consensusID : consensus_9548#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [GACNCCGATCCTGGTGACGCGAANCCGTTCGCGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGCACGTGTCGGGACGGGGGCGCCCGCGGGCGCTACCGNTGGACACCTCGTGACATGTCTGCCCGGGACCCGTTCGGTTCGTCGTGACTCGTGACCATGTNTGACGTACGCCGGCGTTATCTTGCGCGGTACGGGGTTTGTGTGTCCCCTTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGGCCTCGACCTGATCCTGCGAACCTTCTCCGCCCGGATGGAATGAGATTGGTTGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGATAATGCACAAAAAGAAAAAAAAAAAACAGGCATTTNAAGCCTGGC] [-] EMBL AL695694 [GACNCCGATCCTGGTGACGCGAANCCGTTCGCGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGCACGTGTCGGGACGGGGGCGCCCGCGGGCGCTACCGNTGGACACCTCGTGACATGTCTGCCCGGGACCCGTTCGGTTCGTCGTGACTCGTGACCATGTNTGACGTACGCCGGCGTTATCTTGCGCGGTACGGGGTTTGTGTGTCCCCTTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGGCCTCGACCTGATCCTGCGAACCTTCTCCGCCCGGATGGAATGAGATTGGTTGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGATAATGCACAAAAAGAAAAAAAAAAAACAGGCATTTNAAGCCTGGC] consensusID : consensus_9548#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 301 fasta sequence [CAGATCGGCACGAGGNCGGTAAGACGGGCCGCGTGAAGATCAACGATACCGAGACGCCCAAACCGAAGACGCCGATCCTGGTGACGCGAAGCCGGTCGCGGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGGCACGGTCGGGACGGGGGCGCCCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCAGGGAGCCGTCGGGTCGTCGTGACTCGTGAGCATGTGTGACGTACGCCGGGNGTTATACTTGCAGCGGACGGGGGTTGTGTGTGCCTNTGATTTG] [+] EMBL BX469249 [CAGATCGGCACGAGGNCGGTAAGACGGGCCGCGTGAAGATCAACGATACCGAGACGCCCAAACCGAAGACGCCGATCCTGGTGACGCGAAGCCGGTCGCGGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGGCACGGTCGGGACGGGGGCGCCCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCAGGGAGCCGTCGGGTCGTCGTGACTCGTGAGCATGTGTGACGTACGCCGGGNGTTATACTTGCAGCGGACGGGGGTTGTGTGTGCCTNTGATTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 CCGGGTGAAGCGGCACGAGCCACCAATCGTGGTGGATAACAGTGAAGCTGAGGACGCATC 60 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GGGCGATGGCGGAGTGGCGATCGGGGAGGAATCCACCATTGGCGAGGAGGCACGGCGGAA 120 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GGTGTTCGATGGGCCGACGGTCGAGGGCAGTGGCGAAGAGACGGACCACAGTGCTCGTGT 180 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GATGGCTGCGGAGGTCGAGGAGGATGGCGAAGGTGATGAGGACGTCACGGACGATGGCAG 240 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 TGGCAGTGGGGGCGGTTTTATGGTTGACGTCGCACGGGTCCATGATCTCGAGCCGACCAC 300 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GAGCAGCTCGACAGAGACGCCGCTCGACGAGGAGGAACCGGAAGAGGCACCGATGGGCAT 360 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GCCCAACCTGCACGACGGGCTCGGCATCTTCCGGGACGACAAGGAGGAGGACGACCTCGA 420 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 ACCGACCTCGGAAGAGACCACCTCGGAGGGCACGAACGCACGCGTCATGGTCGGTGCGCC 480 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 CGGCATTATGAAGACGGCCAGCGATGGAACGGCGGCCGGTGATGGATCGTCAGAAACTCC 540 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GCTCGTCGCTGGCGGAGCGCTCGTACCTCCACAGTCAGAGGAAGATAACCAGAAGACCTA 600 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 CCTGCTGCTCGCCATCCTGGGCATCATCGTCGTGTCGCTCATCGTGATGGTGGTGTGCAA 660 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GCGCAAGCCGGACTCGCGCAACCGCCGCGGCAAGTACGACGTGGAGACGGCAAACGGTAC 720 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 CGGGCGCGAGATGAAGGAGATGAACAAGAACCTGCTGGGCGAGAAGGGACCGGCCGACCG 780 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GAACGGGCGCGGTGTACCCGAGCAGACGCCGCTCATGTCGCCGGACAAAAACGACTACGA 840 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ------------------------------------------------------------ consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GCGGGTGTTCGGCGACCCGCAGAAGACCGCCTTCAGCCCGGTGAAGCCCGTGCGCACCTC 900 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ---------------------------------------------------------CCG 3 consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GCTCGAGAAGCCGATGGAATCGTTCAAACCGATCGCGGCCGAACGGCGCACGAACGATGC 960 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 CCTAATCCAAACATGAGGAAACATTCCCATCTTCTTGCTGTGCACCGAGCTAGTCCGCTA 63 consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GGCCGGTGCCCCCGCGGACAACAACAACACGGCCACGCTGCCGAACGGCAACGGTGCGCT 1020 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ATATTTAATTCCCGAAGGATTATAACAGAAAACACGCCAGAATGTCCACGAAATCATCCA 123 consensus_9548#2 ------------------------------------------------------------ consensus_9548#3 ------------------------------------------------------------ consensus_9548#0 GCAGAACGGTGACGGCCCGGCCGGTGTGCACCGACAGCCGGACCACCCGAACCACCACCA 1080 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 ACAGCATTGACAGCCGCACCGAGCTGGCCGATCT--TGTTAAAAGAAAGGCAGAAATCTC 181 consensus_9548#2 ---------CCGTTTGTTTCAA--TGGCCAACCTAATGTTTGTGTACCTTTCTGCGTCCA 49 consensus_9548#3 ---------------GAATGAGAGTGGGTGGTTTTGGGTGGAACGGGACATCT-TTCGTT 44 consensus_9548#0 ACAACAAGTGCCATCAACGAACGGGGACGTGACCGATCCGGACGGCCACCTGGCGGTGCC 1140 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 GGAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGA 241 consensus_9548#2 GGAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGA 109 consensus_9548#3 GCTTCTATCTGCCGACCTGGG-CGGC--GTCATCTTCATCGGTGTTTCCTGTGCGGGCTA 101 consensus_9548#0 GCTCGAGTCGCCCCGCTCGAAACGCTACAGCCCCATCTACGTGCCTACCTCGCCGAAATC 1200 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 CACCCAGCTGTAC-GGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAA 300 consensus_9548#2 CACCCAGCTGTAC-GGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAA 168 consensus_9548#3 TGGCTAA-TGCACAGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAA 160 consensus_9548#0 GGACCGGTACAGCCCGGTGTACTCGCCG-GAGACGGGCCG---CGTGAAGATCAAGATGA 1256 consensus_9548#5 ---------CAGATCGGCACGAGGNCGGTAAGACGGGCCG---CGTGAAGATCAACGATA 48 consensus_9548#4 ------------------------------------------------------------ consensus_9548#1 CCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTT 360 consensus_9548#2 CCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTT 228 consensus_9548#3 CCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTT 220 consensus_9548#0 CCGAGACGCCCAAACCGAAGACGCCGATCCTG--GTGACGCGAAGCCGGTCGCGGGCCGG 1314 consensus_9548#5 CCGAGACGCCCAAACCGAAGACGCCGATCCTG--GTGACGCGAAGCCGGTCGCGGGCCGG 106 consensus_9548#4 -------------------GACNCCGATCCTG--GTGACGCGAANCCGTTCGCGG-CCGG 38 * * ** ** ** ** * * ** consensus_9548#1 CGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACG-AGCGACACC 419 consensus_9548#2 CGAAATCATCCATCACCTCGATGGCGGCCGTCAGCGGTTTGGTGGACACG-AGCGACACC 287 consensus_9548#3 CGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGGAGCGACACC 280 consensus_9548#0 CGACATCATC-ACCACGATG--GACGACCAGAAGT--TCTAGGGCACG-GTTGGGACGGG 1368 consensus_9548#5 CGACATCATC-ACCACGATG--GACGACCAGAAGT--TCTAGGGCACG-GTCGGGACGGG 160 consensus_9548#4 CGACATCATC-ACCACGATG--GACGACCAGAAGT--TCTAGG-CACGTGTCGGGACGGG 92 *** ****** * *** * * ** ** ** * * * ** * * *** consensus_9548#1 AAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAG 479 consensus_9548#2 AAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAG 347 consensus_9548#3 AAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAG 340 consensus_9548#0 GGCGACCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCC-GGGAGCCGT-CGG 1426 consensus_9548#5 GGCGCCCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCAGGGAGCCGT-CGG 219 consensus_9548#4 GGCGCCCG-CGGGCGCTACCGNTGGACACCTCGTGACATGTCTGCCCGGGACCCGTTCGG 151 * ** *** * * * * * * * * * consensus_9548#1 GCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGC-GCGCGAACCCGCCACCCC 538 consensus_9548#2 GCCGGTGGTACGCATTCCACCGTGAACCATTCGTCGGGCGC-GCGCGAACCCGCCACCCC 406 consensus_9548#3 GCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGC-GCGCGAACCCGCCACCCC 399 consensus_9548#0 GTCGTCGTGACTCGTGACCATGTGTGACGTACGCCGG-CGTTAT-CTTGC-GCGGACNGG 1483 consensus_9548#5 GTCGTCGTGACTCGTGAGCATGTGTGACGTACGCCGGGNGTTATACTTGCAGCGGACGGG 279 consensus_9548#4 TTCGTCGTGACTCGTGACCATGTNTGACGTACGCCGG-CGTTAT-CTTGCGCGGTACGGG 209 ** * ** * * ** * * ** *** * * * ** consensus_9548#1 GGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTC 598 consensus_9548#2 GGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTC 466 consensus_9548#3 GGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTC 459 consensus_9548#0 GGTTGTGTGTGCC---TTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTG-CCTC 1539 consensus_9548#5 GGTTGTGTGTGCC---TNTGATTTG----------------------------------- 301 consensus_9548#4 GTTTGTGTGTCCCC--TTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGGCCTC 267 * ** * ** * consensus_9548#1 CGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTC 658 consensus_9548#2 CGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTC 526 consensus_9548#3 CGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTC 519 consensus_9548#0 GACCTGATCCTGCGAACCTTCCAACCGCCCGGATGGAATG-------------------- 1579 consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 GACCTGATCCTGCGAACCTTCT--CCGCCCGGATGGAATGAGATTGGTTGTTTTGGGTGG 325 consensus_9548#1 CGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCAC 718 consensus_9548#2 CGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCAC 586 consensus_9548#3 CGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCAC 579 consensus_9548#0 ------------------------------------------------------------ consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 AACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGT 385 consensus_9548#1 GTCCAGCTTGGGCGAAAGATGCGG------------------------------------ 742 consensus_9548#2 GTCCAGCTT--------------------------------------------------- 595 consensus_9548#3 GTCC-------------------------------------------------------- 583 consensus_9548#0 ------------------------------------------------------------ consensus_9548#5 ------------------------------------------------------------ consensus_9548#4 TTCCTGTGCGGGCTATGGATAATGCACAAAAAGAAAAAAAAAAAACAGGCATTTNAAGCC 445 consensus_9548#1 ---- consensus_9548#2 ---- consensus_9548#3 ---- consensus_9548#0 ---- consensus_9548#5 ---- consensus_9548#4 TGGC 449 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||