cluster # 9550

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Anopheles gambiae
cluster # 9550 cluster # 9550 Sequences # 18 consensus # 8

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9550#0 length = 1998 sequences # 8
consensus_9550#1 length = 687 sequences # 1
consensus_9550#2 length = 618 sequences # 2
consensus_9550#3 length = 558 sequences # 2

consensus_9550#4 length = 553 sequences # 2
consensus_9550#5 length = 478 sequences # 1
consensus_9550#6 length = 397 sequences # 1
consensus_9550#7 length = 244 sequences # 1

consensusID : consensus_9550#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1998
fasta sequence

                              [GACGCGCGAATAGAACGCATTACTCCTCAGTTTTAGTCTGAAAAGTGTACCAAACCCCTTAAACCACAACCAT-GTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGGATTGTGAAAAACGGCGGCACTCTGGACGATACGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAACTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGACCGGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACATCGGCGAG-GTGCACCAT-CTAACGGAGGTTAACCTGGAGAAGAACAGTATCGTGGCGCTGCCGGGAAGACCTTACGCGGTCAGCAGTATACTGCGCTTGCTGAACGTGGGCGACAACAAAATCGAACAGGTGCCCAAGTACATTGCCAAGTGCGCGAAACTGAAGGAATTTAACCTGAAGGGCAACCCGCTCAAGGATAAACGTTTGCTGAAGCTGGTGGACCAGTGCCGCAGCAAGCAGGTGCTCGATTACGTCGAGAAGAACGGGTACCAACCACCGAAGCAAACGCCCAAAGAGAATCCATCCACCGCTAGCAACGGGCAGCAGGTGGTTCCACCCCCCAATGGAGCGCCAGAGAAAGAGCAGGAAGAAGCTCAGCTTAAAATAATCGTCCGCAAAGCAACGGCTAGCGCACCGAAGGTAACGTTCACGCAGGAAGCACGTAGCACCCGTCCGCACATCGTGCTCTGCATCGTACGCTCGTTCCCGATCGCGAACCTGAAAAAGTTTCTTCAGCTGCAAAACACGCTGCATGACACCGAGTGTAACCGGCGCCAGCTGGCCACCATTGCGACGCACGATCTGGCCAAAGTGAAGGGCGCGCTGCGGTACCACGCTGCACCGCCGGCTGAGATTGAAATCACCGCGCTTGGCAGCGCCGCCCAGGGTAAGGTGACGGCCGAACAGTATTACGCCGACCTGTGCCACCAGGCCGAGCTGCTGCGCAAGGAAAAGAAGCGCAACACGTACTCGGGCGTGCACAAGTACATTACGCTGCTGACGGCGAGGGAACTGTTTGCGTATCTGAGCGACGAGGAGAAGGTGATCAGCCTGCCGCCGCTAACGAACTGTGATGAGACGAAGGTATCCGCTACCACCACCGATCTGCTGCTCGAGGTGACGAGCAGCGTTGGCCATGGGCCGTGCGTGCGCGTCATGAACGTGTTGCTGGAGCGTATGCTGCTGATGGATGTGGAGGTCGTTTCCGGTGGGGTAGCAGCTGCGACCGAGCAGCCCCCAGCAGCCGGTGAGAGGAAGAAAAAATCGAAAGCCATCGCCAAAGAAGCGGCCGAACGGGTGGCAACGGTTCGGTACGATCGAGCCGTGACGCTCACGGTGGAACAGGTGCAGCTGTATGACCATGAGGGTAAGCCGCACTCCGTGTTCCCCGGCAAGGGCGATCTGTGCGGGGATGAAGCGAAACGAATTGTGGTAGAAATGGCCTAAGGCAGAGTTTTCTCA--TGGATTTTTTTAAAC--TGAACTCATACTTACCGATTTGCGATTGGGAATAAGATTCTACCGGATTAGCTTACAAAGTGAAATTACTTTCAGTACATAAAGAGCGACACGCAAATCACGACACGTTTTGAATTTATACACGGATTTATACAACTAATAAATGTTCTTTGGTTGAACTCATGAAAAAAAAGGACTGTTTACAATTGTTTATGTTTATCGTATAATAAATTTAAGT]

[+] EMBL CNS096AV             [GACGCGCGAATAGAACGCATTACTCCTCAGTTTTAGTCTGAAAAGTGTACCAAACCCCTTAAACCACAACCAT GTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGGATTGTGAAAAACGGCGGCACTCTGGACGATACGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAACTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGACCGGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACATCGGCGAG GTGCACCAT CTAACGGAGGTTAACCTGGAGAAGAACAGTATCGTGGCGCTGCCGGGAAGACCTTACGCGGTCAGCAGTATACTGCGCTTGCTGAACGTGGGCGACAACAAAATCGAACAGGTGCCCAAGTACATTGCCAAGTGCGCGAAACTGAAGGAATTTAACCTGAAGGGCAACCCGCTCAAGGATAAACGTTTGCTGAAGCTGGTGGACCAGTGCCGCAGCAAGCAGGTGCTCGATTACGTCGAGAAGAACGGGTACCAACCACCGAAGCAAACGCCCAAAGAGAATCCAACCACCGTTAGCAACGGGCAGCAGGTGGTTCCACCCCCCAATGGAGCGCCAGAGAAAGAGCAGGAAGAAGCTCAGCTTAAAATAATCGTCCGCAAAGCGACGGCTAGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08R2J             [                                                                    ACCATAGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAG TCAAGCTGACCGGTGCCAGCGTATCGGAACGGAATGTGAAAAACGGCGGCACTCTGGACGATACGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAACTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGACCGGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACATCGGCGAGAGTGCACCATACTAACGGAGGTTAACCTGGAGAAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX605547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCAAGTGCGCGAAACTGAAGGAATTTAACCTGAAGGGCAACCCGCTCAAGGATAAACGTTTGCTAAAGCTGGTGGACCAGTGCCGCAGCAAGCAGGTGCTCGATTACGTCGAGAAGAACGGGTACCAACCACCGAAGCAAACGCCCAAAGAGAATCCATCTACCGCTAGCAACGGGCAGCAGGTGGTTCCACCCCCCAATGGAGCGCCAGAGAAAGAGCAGGAAGAAGCTCAGCTTAAAATAATCGTCCGCAAACCAACGGCTAGCGCACCGAAGGTAACGTTCACGCAGGAAGCACGTAGCACCCGTCCGCACATCGTGCTCTGCATCGTACGCTCGTTCCCGATCGCGAACCTGAAAAAGTTTCTTCAGCTGCAAAACACGCTGCATGACACCGAGTGTAACCGGCGCCAGCTGGCCACCATTGCGACGCACGATCTGGCCAAAGTGAAGGGCGCGCTGCGGTACCACGCTGCACCGCCGGCTGAGATTGAAATCACCGCGCTTGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX605630             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGTACCAACCTCCGAAGCAAACGCCCAAAGAGAATCCATCCACCGCTAACAACGGGCAGCAGGTGGTTTCGCCCCCTAATGGACCCGCAGAGAAAGAGCAGGAAGAAGCTCAGCTTAAAATAATCGTCCGCAAAGCAACGCCTAGCGCACCGAAGGTAACGTTCACGCAGGAAGCACGTAGCGCCCGTCCGCACATCGTGCTCTGCATCGTACGCTCGTTCCCGATCGCGAACCTGAAAAAGTTTCTTCAGCTGCAAAACACGCTGCACGACACCGAGTGTAACCGGCGCCAGCTGGCCACCATTGCGACGCACGATCTGGCCAAAGTGAAGGGCGCGCTGCGGTACCACGCTGCACCGCCGGCTGAGATTGAAATCACCGCGCTTGGCAGCGCCGCCCAGGGTAAGGTGACGGCCGAACAGTATTACGCCGACCTGTGCCACCAGGCCGAGCTGCTGCGCAAGGAAAAGAAGCGCAACACGTACTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM630430             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgCGCCGGCTGAAATTGAAATCACCGCGCTTGGCAGCGCCGCCCAGGGTAAGGTGACGGCCGAACAGTATTACGCCGACCTGTGCCACCAGGCCGAGCTGCTGCGCAAGGAAAAGAAGCGCAACACGTACTCGGGCGTGCACAAGTACATTACGCTGCTGACGGCGAGGGAACTGTTTGCGTATCTGAGCGACGAGGAGAAGGTGATCAGCCTGCCGCCGCTAACGAACTGTGATGAGACGAAGGTATCCGCTACCACCACCGATCTGCTGCTCGAGGTGACGAGCAGCGTTGGCCATGGGCCGTGCGTGCGCGTCATGAACGTGTTGCTGGAGCGTATGCTGCTGATGGATGTGGAGGTCGTTTCCGGTGGGGTAGCAGCTGCGACCGAGCAGCCCCCAGCAGCCGGTGAGAGGAAGAAAAAATCGAAAGCCATCGCCAAAGAAGCGGCCGAACGGGTGGCAACGGTTCGGTACGATCGAGCCGTGACGCTCACGGTGGAACAGGTGCAGCTGTATGACCATGAGGGTAAGCCGCACTCCGTGTTCCCCGGCAAGGGCGATCTGTGCGGGGATGAAGCGAAACGAATTGTGGTAGAAATGGCCTAAGGCAGAGTTTTCTCA  TGGATTTTTTTAAAC  TGAACTCATACTTACCGATTTGCGATTGGGAATAA                                                                                                                                                                                      ]
[-] EMBL AGA280277            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGCAACGGTTCGGTACGATCGAGCCGTGACGCTCACGGTGGAACAGGTGCAGCTGTACGACCACGAGGGTAAGCCGCACTCCGTGTTCCCCGGCAAGGGCGATCTGTGCGGGGATGAAGCGAAACGAATTGTGGTGGAAATGGCCTAAGGCAGAGTTTTGTCAAGGGGATTTTTTTAAACTTTTAACTCATACTTACCGATTTGCGATTGGGAATAAGATTCTACCGGATTAGCTTACAAAGTGAAATTACTTTCAGTACATAAAGAGCGACACGCAAATCACGACACGTTTTGAATTTATACACGGATTTATACAACTAATAAATGTTCTTTGGTTGAACTCATGAAAAAAAA                                             ]
[-] EMBL CNS096AW             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACGCTCACAGTGGAACAGGTGCAGCTGTATGACCATGAGGGTAAGCCGC CTCCGTGTTCCCCGGCAAGGGCGATCTGTGCGGGGATGAAGCGAAACGAATTGTGGTAGAAATGGCCTAAGGCAGAGTTTTCTCA  TGGATTTTTTTAAAC  TGAACTCATACTTACCGATTTGCGATTGGGAATAAGATTCTACCGGATTAGCTTACAAAGTGAAATTACTTTCAGTACATAAAGAGCGACACGCAAATCACGACACGTTTTGAATTTATACACGGATTTATACAACTAATAAATGTTCTTTGGTTGAACTCATG                                                     ]
[-] EMBL CNS08R2K             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGC CTCCGGTTTCCCCTGCAAGGGCGATCTGTGCGGGGATGAAGCGAAACGAATTGTGGTAGAAATGGCCTAAGGCAGAGTTTTCTCA  TGGATTTTTTTAAAC  TGAACTCATACTTACCGATTTGCGATTGGGAATAAGATTCTACCGGATTAGCTTACAAAGTGAAATTACTTTCAGTACATAAAGAGCGACACGCAAATCACGACACGTTTTGAATTTATACACGGATTTATACAACTAATAAATGTTCTTTGGTTGAACTCATGAAGACCATGGACTGTTTACAATTGTTTATGTTTATCGTATAATAAATTTAAGT]




>consensus_9550#0
GACGCGCGAATAGAACGCATTACTCCTCAGTTTTAGTCTGAAAAGTGTACCAAACCCCTT
AAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAGCTCA
AGCTGACCGGTGCCAGCGTATCGGAACGGATTGTGAAAAACGGCGGCACTCTGGACGATA
CGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGA
TTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAA
TTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCG
GCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAACTGCGCTCCCTGACCACGCTGA
ACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGACCGGCTGAGCGTTT
GCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACATCGGCGAGGTGCACC
ATCTAACGGAGGTTAACCTGGAGAAGAACAGTATCGTGGCGCTGCCGGGAAGACCTTACG
CGGTCAGCAGTATACTGCGCTTGCTGAACGTGGGCGACAACAAAATCGAACAGGTGCCCA
AGTACATTGCCAAGTGCGCGAAACTGAAGGAATTTAACCTGAAGGGCAACCCGCTCAAGG
ATAAACGTTTGCTGAAGCTGGTGGACCAGTGCCGCAGCAAGCAGGTGCTCGATTACGTCG
AGAAGAACGGGTACCAACCACCGAAGCAAACGCCCAAAGAGAATCCATCCACCGCTAGCA
ACGGGCAGCAGGTGGTTCCACCCCCCAATGGAGCGCCAGAGAAAGAGCAGGAAGAAGCTC
AGCTTAAAATAATCGTCCGCAAAGCAACGGCTAGCGCACCGAAGGTAACGTTCACGCAGG
AAGCACGTAGCACCCGTCCGCACATCGTGCTCTGCATCGTACGCTCGTTCCCGATCGCGA
ACCTGAAAAAGTTTCTTCAGCTGCAAAACACGCTGCATGACACCGAGTGTAACCGGCGCC
AGCTGGCCACCATTGCGACGCACGATCTGGCCAAAGTGAAGGGCGCGCTGCGGTACCACG
CTGCACCGCCGGCTGAGATTGAAATCACCGCGCTTGGCAGCGCCGCCCAGGGTAAGGTGA
CGGCCGAACAGTATTACGCCGACCTGTGCCACCAGGCCGAGCTGCTGCGCAAGGAAAAGA
AGCGCAACACGTACTCGGGCGTGCACAAGTACATTACGCTGCTGACGGCGAGGGAACTGT
TTGCGTATCTGAGCGACGAGGAGAAGGTGATCAGCCTGCCGCCGCTAACGAACTGTGATG
AGACGAAGGTATCCGCTACCACCACCGATCTGCTGCTCGAGGTGACGAGCAGCGTTGGCC
ATGGGCCGTGCGTGCGCGTCATGAACGTGTTGCTGGAGCGTATGCTGCTGATGGATGTGG
AGGTCGTTTCCGGTGGGGTAGCAGCTGCGACCGAGCAGCCCCCAGCAGCCGGTGAGAGGA
AGAAAAAATCGAAAGCCATCGCCAAAGAAGCGGCCGAACGGGTGGCAACGGTTCGGTACG
ATCGAGCCGTGACGCTCACGGTGGAACAGGTGCAGCTGTATGACCATGAGGGTAAGCCGC
ACTCCGTGTTCCCCGGCAAGGGCGATCTGTGCGGGGATGAAGCGAAACGAATTGTGGTAG
AAATGGCCTAAGGCAGAGTTTTCTCATGGATTTTTTTAAACTGAACTCATACTTACCGAT
TTGCGATTGGGAATAAGATTCTACCGGATTAGCTTACAAAGTGAAATTACTTTCAGTACA
TAAAGAGCGACACGCAAATCACGACACGTTTTGAATTTATACACGGATTTATACAACTAA
TAAATGTTCTTTGGTTGAACTCATGAAAAAAAAGGACTGTTTACAATTGTTTATGTTTAT
CGTATAATAAATTTAAGT

consensusID : consensus_9550#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 687
fasta sequence

                              [CCGCTGAAAAAGTTTCTTCAGGTTCGCGATCGGGAACGAGCGTACGATGCAGAGCACGATCGCGAACCTGAAAAAGTTTCTTCAGCTGCAAAACACGCTGCACGACACCGAGTGTAACCGGCGCCAGCTGGCCACCATTGCGACGCACGATCTGGCCAAAGTGAAGGGCGCGCTGCGGTACCACGCTGCACCGCCGGCTGAGATTGAAATCACCGCGCTTGGCAGCGCCGCCCAGGGTAAGGTGACGGCCGAACAGTATTACGCCGACCTGTGCCACCAGGCCGAGCTGCTGCGCAAGGAAAAGAAGCGCAACACGTACTCGGGCGTGCACAAGTACATTACGCTGCTGACGGCGAGGGAACTGTTTGCGTATCTGAGCGACGAGGAGAAGGTGATCAGCCTGCCGCCGCTAACGAACTGTGATGAGACGAAGGTATCCGCTACCACCACCGATCTGCTGCTCGAGGTGACGAGCAGCGTTGGCCATGGGCCGTGCGTGCGCGTCATGAACGTGCTGCTGGAGCGTATGCTGCTGATGGATGTGGAGGTCGTTTCCGGTGGGGTAGCTGCTGCGACCGAGCAGCCCCCAGCAGCCGGTGAGAGGAAGAAAAAATCGAAAGCCATCGCCAAAGAAGCGGCCGAACGGGTGGCAACGGTTCGGTACGATCGAGCCGTGACGCTCACGGT]

[+] EMBL BM613580             [CCGCTGAAAAAGTTTCTTCAGGTTCGCGATCGGGAACGAGCGTACGATGCAGAGCACGATCGCGAACCTGAAAAAGTTTCTTCAGCTGCAAAACACGCTGCACGACACCGAGTGTAACCGGCGCCAGCTGGCCACCATTGCGACGCACGATCTGGCCAAAGTGAAGGGCGCGCTGCGGTACCACGCTGCACCGCCGGCTGAGATTGAAATCACCGCGCTTGGCAGCGCCGCCCAGGGTAAGGTGACGGCCGAACAGTATTACGCCGACCTGTGCCACCAGGCCGAGCTGCTGCGCAAGGAAAAGAAGCGCAACACGTACTCGGGCGTGCACAAGTACATTACGCTGCTGACGGCGAGGGAACTGTTTGCGTATCTGAGCGACGAGGAGAAGGTGATCAGCCTGCCGCCGCTAACGAACTGTGATGAGACGAAGGTATCCGCTACCACCACCGATCTGCTGCTCGAGGTGACGAGCAGCGTTGGCCATGGGCCGTGCGTGCGCGTCATGAACGTGCTGCTGGAGCGTATGCTGCTGATGGATGTGGAGGTCGTTTCCGGTGGGGTAGCTGCTGCGACCGAGCAGCCCCCAGCAGCCGGTGAGAGGAAGAAAAAATCGAAAGCCATCGCCAAAGAAGCGGCCGAACGGGTGGCAACGGTTCGGTACGATCGAGCCGTGACGCTCACGGT]




>consensus_9550#1
CCGCTGAAAAAGTTTCTTCAGGTTCGCGATCGGGAACGAGCGTACGATGCAGAGCACGAT
CGCGAACCTGAAAAAGTTTCTTCAGCTGCAAAACACGCTGCACGACACCGAGTGTAACCG
GCGCCAGCTGGCCACCATTGCGACGCACGATCTGGCCAAAGTGAAGGGCGCGCTGCGGTA
CCACGCTGCACCGCCGGCTGAGATTGAAATCACCGCGCTTGGCAGCGCCGCCCAGGGTAA
GGTGACGGCCGAACAGTATTACGCCGACCTGTGCCACCAGGCCGAGCTGCTGCGCAAGGA
AAAGAAGCGCAACACGTACTCGGGCGTGCACAAGTACATTACGCTGCTGACGGCGAGGGA
ACTGTTTGCGTATCTGAGCGACGAGGAGAAGGTGATCAGCCTGCCGCCGCTAACGAACTG
TGATGAGACGAAGGTATCCGCTACCACCACCGATCTGCTGCTCGAGGTGACGAGCAGCGT
TGGCCATGGGCCGTGCGTGCGCGTCATGAACGTGCTGCTGGAGCGTATGCTGCTGATGGA
TGTGGAGGTCGTTTCCGGTGGGGTAGCTGCTGCGACCGAGCAGCCCCCAGCAGCCGGTGA
GAGGAAGAAAAAATCGAAAGCCATCGCCAAAGAAGCGGCCGAACGGGTGGCAACGGTTCG
GTACGATCGAGCCGTGACGCTCACGGT

consensusID : consensus_9550#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 618
fasta sequence

                              [CCGCCCACGCGTCCGGCATTACTTCTCAGTTTTAGTCTGAAAAGTGTACCAACCCCCTTAAACTTCCTACCCAAAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGAATTGTGAAAAACGGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAGCTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGACCGGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACATCGGCGAGGTGCACCATCTAACGGAGGTTAACCTGGAGAAGAACAGTATCGTGGCGCTGCCGGGAAGACCTTACGCGGC]

[+] EMBL BM651661             [CCGCCCACGCGTCCGGCATTACTTCTCAGTTTTAGTCTGAAAAGTGTACCAACCCCCTTAAACTTCCTACCCAAAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGAATTGTGAAAAACGGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAGCTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGACCGGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACATCGGCGAGGTGCACCATCTAACGGAGGTTAACCTGGAGAAGAACAGTATCGTGGCGCTGCCGGGAAGACCTTACGCGGC]
[+] EMBL BX604573             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GACCGGCTGAGCGTTTGCAACCGGTCCGGCAACGAGCTCGCGGAGGGGCCACAGTGCCACATCGGCGAGGGGCACCATCTAACGGAGGGTAACCTGGAGAAGAACAGTATCGGGG                         ]




>consensus_9550#2
CCGCCCACGCGTCCGGCATTACTTCTCAGTTTTAGTCTGAAAAGTGTACCAACCCCCTTA
AACTTCCTACCCAAAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAA
TCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGAATTGTGAAAAACGGCGG
CAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATAC
GCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCT
GTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGT
GCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAGCTGCGCTC
CCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGA
CCGGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACAT
CGGCGAGGTGCACCATCTAACGGAGGTTAACCTGGAGAAGAACAGTATCGTGGCGCTGCC
GGGAAGACCTTACGCGGC

consensusID : consensus_9550#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 558
fasta sequence

                              [CCGGCGACGCGGAATAGAACGCATTACTTCTCAGTTTTAGTCTGAAAAGTGTACCAACCCCCTTAAACTTCCTACCCAAAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGAATTGTGAAAAACGGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAGCTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGACCGGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACATCGGCGAGGTGCAC]

[+] EMBL BM606391             [CCGGCGACGCGGAATAGAACGCATTACTTCTCAGTTTTAGTCTGAAAAGTGTACCAACCCCCTTAAACTTCCTACCCAAAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGAATTGTGAAAAACGGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAGCTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGACCGGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACATCGGCGAGGTGCAC]
[+] EMBL BM652613             [CCGGCGACGCGGAATAGAACGCATTACTTCTCAGTTTTAGTCTGAAAAGTGTACCAACCCCCTTAAACTTCCTACCCAAAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGAATTGTGAAAAACGGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAGCTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCT                                                                                                    ]




>consensus_9550#3
CCGGCGACGCGGAATAGAACGCATTACTTCTCAGTTTTAGTCTGAAAAGTGTACCAACCC
CCTTAAACTTCCTACCCAAAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGT
GAAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGAATTGTGAAAAAC
GGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAAT
GATACGCCACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTG
CTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTG
AAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAGCTG
CGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCG
CTGGACCGGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTC
CACATCGGCGAGGTGCAC

consensusID : consensus_9550#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 553
fasta sequence

                              [ATCGGCACGAGGCAAACCTCTTAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGANAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGGATTGTGAAAAACGGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGACAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAGCTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATTTAGTGCGCTGGACCGGCTGAGCGTCTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGNNCCACATCGGCGAGGTGCACCATCTAACGGAGGTTACCCTGGAGAAGANCAGTATCGTGGCGCTGCCGGAAA]

[+] EMBL BX619739             [ATCGGCACGAGGCAAACCTCTTAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGANAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGGATTGTGAAAAACGGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGACAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAGCTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATTTAGTGCGCTGGACCGGCTGAGCGTCTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGNNCCACATCGGCGAGGTGCACCATCTAACGGAGGTTACCCTGGAGAAGANCAGTATCGTGGCGCTGCCGGAAA]
[+] EMBL AGA281974            [                                                         AAGAGTGA AAATCGGCGCGAGCTCACGCTGACCGGTGCCAGCGTATCGGAACGGATTGTGAAAAACGGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGACAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTG                                                                                                                                                                                                                                          ]




>consensus_9550#4
ATCGGCACGAGGCAAACCTCTTAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAG
AGTGANAAATCGGCGCGAGCTCAAGCTGACCGGTGCCAGCGTATCGGAACGGATTGTGAA
AAACGGCGGCAGTCTGGACGATGCGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGT
GAATGATACGCCACTGGATCGGATTTCACCACGCATCGACAGTCTGACTCATCTGCAGTC
GCTGCTGCTGTATCGGAACAAAATTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGA
GCTGAAGGTGCTCGATCTGTCCGGCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAA
GCTGCGCTCCCTGACCACGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTGGATTTAGT
GCGCTGGACCGGCTGAGCGTCTGCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAG
NNCCACATCGGCGAGGTGCACCATCTAACGGAGGTTACCCTGGAGAAGANCAGTATCGTG
GCGCTGCCGGAAA

consensusID : consensus_9550#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 478
fasta sequence

                              [AATTGCCCGAGGTTAAAAGTGTACAAACCCCTTAACCACAACATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCTGGNGCGTAGCTCAAGCTGACCGGTGCCAGCTGTATCTGGAACGGATTGTGAAAAACTGGCGNGCAGTCTGGACGATGCGGTGTACCAGCTGTCCTGCCCTGTAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGACAGTCTGACTCATCTGCAGTCGCTGCTGCTGTAATCTGTGAACAAAATTTGCACAAACTTGCCGGCACACAGAATCTGGCCAGCTGGGCGAGCCTGAACGTGTGCTCGACTCTTGTCCTGGCAACAGGCTCTGACGCGAAGGTGCCGGGCGAGTTTTGGCAAGCTGCTGCTCCCTGACCACTGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTTGGATCTTACNTGCGCTGGACCTGGCCT]

[+] EMBL AL931930             [AATTGCCCGAGGTTAAAAGTGTACAAACCCCTTAACCACAACATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCTGGNGCGTAGCTCAAGCTGACCGGTGCCAGCTGTATCTGGAACGGATTGTGAAAAACTGGCGNGCAGTCTGGACGATGCGGTGTACCAGCTGTCCTGCCCTGTAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGACAGTCTGACTCATCTGCAGTCGCTGCTGCTGTAATCTGTGAACAAAATTTGCACAAACTTGCCGGCACACAGAATCTGGCCAGCTGGGCGAGCCTGAACGTGTGCTCGACTCTTGTCCTGGCAACAGGCTCTGACGCGAAGGTGCCGGGCGAGTTTTGGCAAGCTGCTGCTCCCTGACCACTGCTGAACCTTTCCTTCAATCAGCTCAAGAAGTTTGGATCTTACNTGCGCTGGACCTGGCCT]




>consensus_9550#5
AATTGCCCGAGGTTAAAAGTGTACAAACCCCTTAACCACAACATGTGGCCCGAGGTGGAA
GCCGTGAAGAGTGAAAATCTGGNGCGTAGCTCAAGCTGACCGGTGCCAGCTGTATCTGGA
ACGGATTGTGAAAAACTGGCGNGCAGTCTGGACGATGCGGTGTACCAGCTGTCCTGCCCT
GTAACCTGCTGGACGTGAATGATACGCCACTGGATCGGATTTCACCACGCATCGACAGTC
TGACTCATCTGCAGTCGCTGCTGCTGTAATCTGTGAACAAAATTTGCACAAACTTGCCGG
CACACAGAATCTGGCCAGCTGGGCGAGCCTGAACGTGTGCTCGACTCTTGTCCTGGCAAC
AGGCTCTGACGCGAAGGTGCCGGGCGAGTTTTGGCAAGCTGCTGCTCCCTGACCACTGCT
GAACCTTTCCTTCAATCAGCTCAAGAAGTTTGGATCTTACNTGCGCTGGACCTGGCCT

consensusID : consensus_9550#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 397
fasta sequence

                              [GCTGAACGTGGGCGACAACAAAATCGAACAGGTGCCCAAGTACATTGCCAAGTGCGCGAAACTGAAGGGTAAGCGGCAAAGCATGCTTTGATTCGATTGTGAGCTTATATTATCCTATTTTGTACTTTCTTTTCAACAACAACAGAATTTAACCTGAAGGGCAACCCGCTCAAGGATAAACGTTTGCTGAAGCTGGTGGACCAGTGCCGCAGCAAGCAGGTGCTCGATTACGTCGAGAAGAACGGGTACCAACCACCGAAGCAAACGCCCAAAGAGAATCCAACCACCGTTAGCAACGGGCAGCAGGTGGTTCCACCCCCCAATGGAGCGCCAGAGAAAGAGCAGGAAGAAGCTCAGCTTAAAATAATCGTCCGCAAAGCGACGGCTAGCGCACCGA]

[+] EMBL BX603567             [GCTGAACGTGGGCGACAACAAAATCGAACAGGTGCCCAAGTACATTGCCAAGTGCGCGAAACTGAAGGGTAAGCGGCAAAGCATGCTTTGATTCGATTGTGAGCTTATATTATCCTATTTTGTACTTTCTTTTCAACAACAACAGAATTTAACCTGAAGGGCAACCCGCTCAAGGATAAACGTTTGCTGAAGCTGGTGGACCAGTGCCGCAGCAAGCAGGTGCTCGATTACGTCGAGAAGAACGGGTACCAACCACCGAAGCAAACGCCCAAAGAGAATCCAACCACCGTTAGCAACGGGCAGCAGGTGGTTCCACCCCCCAATGGAGCGCCAGAGAAAGAGCAGGAAGAAGCTCAGCTTAAAATAATCGTCCGCAAAGCGACGGCTAGCGCACCGA]




>consensus_9550#6
GCTGAACGTGGGCGACAACAAAATCGAACAGGTGCCCAAGTACATTGCCAAGTGCGCGAA
ACTGAAGGGTAAGCGGCAAAGCATGCTTTGATTCGATTGTGAGCTTATATTATCCTATTT
TGTACTTTCTTTTCAACAACAACAGAATTTAACCTGAAGGGCAACCCGCTCAAGGATAAA
CGTTTGCTGAAGCTGGTGGACCAGTGCCGCAGCAAGCAGGTGCTCGATTACGTCGAGAAG
AACGGGTACCAACCACCGAAGCAAACGCCCAAAGAGAATCCAACCACCGTTAGCAACGGG
CAGCAGGTGGTTCCACCCCCCAATGGAGCGCCAGAGAAAGAGCAGGAAGAAGCTCAGCTT
AAAATAATCGTCCGCAAAGCGACGGCTAGCGCACCGA

consensusID : consensus_9550#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 244
fasta sequence

                              [TGGCCTACTGGAAAAAAATCTGTGCGGGGATGAAGCGAAACGAATTGTGGTAGAAATGGCCTAAGGCAGAGTTTTCTCATGGATTTTTTTAAACTGAACTCATACTTACCGATTTGCGATTGGGAATAAGATTCTACCGGATTAGCTTACAAAGTGAAATTACTTTCAGTACATAAAGAGCGACACGCAAATCACGACACGTTTTGAATTTATACACGGATTTATACAACTAATAAATGTTCTT]

[-] EMBL CNS08E90             [TGGCCTACTGGAAAAAAATCTGTGCGGGGATGAAGCGAAACGAATTGTGGTAGAAATGGCCTAAGGCAGAGTTTTCTCATGGATTTTTTTAAACTGAACTCATACTTACCGATTTGCGATTGGGAATAAGATTCTACCGGATTAGCTTACAAAGTGAAATTACTTTCAGTACATAAAGAGCGACACGCAAATCACGACACGTTTTGAATTTATACACGGATTTATACAACTAATAAATGTTCTT]




>consensus_9550#7
TGGCCTACTGGAAAAAAATCTGTGCGGGGATGAAGCGAAACGAATTGTGGTAGAAATGGC
CTAAGGCAGAGTTTTCTCATGGATTTTTTTAAACTGAACTCATACTTACCGATTTGCGAT
TGGGAATAAGATTCTACCGGATTAGCTTACAAAGTGAAATTACTTTCAGTACATAAAGAG
CGACACGCAAATCACGACACGTTTTGAATTTATACACGGATTTATACAACTAATAAATGT
TCTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9550#0      GACGCGCGAATAGAACGCATTACTCCTCAGTTTTAGTCTGAAAAGTGTACCAAACCCCTT 60
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      AAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCGGCGCGAGCTCA 120
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      AGCTGACCGGTGCCAGCGTATCGGAACGGATTGTGAAAAACGGCGGCACTCTGGACGATA 180
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      CGGTGTACCAGCTGTCCGCCCTGAACCTGCTGGACGTGAATGATACGCCACTGGATCGGA 240
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      TTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTATCGGAACAAAA 300
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      TTGCACAACTGCCGGCAACGATCGGCCAGCTGGGCGAGCTGAAGGTGCTCGATCTGTCCG 360
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      GCAACAGGTTGACGGAGGTGCCGGGCGAGTTTGGCAAACTGCGCTCCCTGACCACGCTGA 420
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      ACCTTTCCTTCAATCAGCTCAAGAAGTTGGATCTTAGTGCGCTGGACCGGCTGAGCGTTT 480
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      GCAACCTGTCCGGCAACGAGCTCGCGGAGGTGCCACAGTTCCACATCGGCGAGGTGCACC 540
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      ATCTAACGGAGGTTAACCTGGAGAAGAACAGTATCGTGGCGCTGCCGGGAAGACCTTACG 600
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      CGGTCAGCAGTATACTGCGCTTGCTGAACGTGGGCGACAACAAAATCGAACAGGTGCCCA 660
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      AGTACATTGCCAAGTGCGCGAAACTGAAGGAATTTAACCTGAAGGGCAACCCGCTCAAGG 720
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      ATAAACGTTTGCTGAAGCTGGTGGACCAGTGCCGCAGCAAGCAGGTGCTCGATTACGTCG 780
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      AGAAGAACGGGTACCAACCACCGAAGCAAACGCCCAAAGAGAATCCATCCACCGCTAGCA 840
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      ACGGGCAGCAGGTGGTTCCACCCCCCAATGGAGCGCCAGAGAAAGAGCAGGAAGAAGCTC 900
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      AGCTTAAAATAATCGTCCGCAAAGCAACGGCTAGCGCACCGAAGGTAACGTTCACGCAGG 960
consensus_9550#1      -----------------------------------------------------CCGCTGA 7
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      AAGCACGTAGCACCCGTCCGCACATCGTGCTCTGCATCGTACGCTCGTTCCCGATCGCGA 1020
consensus_9550#1      AAA-AGTTTCTTCAGGTTCGCGATCGGGAACGAGCGTACGATGCA-GAGCACGATCGCGA 65
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      -------------------------------------------CCGCCCACGCGTCCG-- 15
consensus_9550#3      -------------------------------------------CCGGCGACGCGGAATAG 17
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      ACCTGAAAAAGTTTCTTCAGCTGCAAAACACGCTGCATGACACCGAGTGTAACCGGCGCC 1080
consensus_9550#1      ACCTGAAAAAGTTTCTTCAGCTGCAAAACACGCTGCACGACACCGAGTGTAACCGGCGCC 125
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ---GCATTACTTCTCAGTTTTAGTCTGAAAAGTGTACCAACCCCCT-TAAACTTCCTACC 71
consensus_9550#3      AACGCATTACTTCTCAGTTTTAGTCTGAAAAGTGTACCAACCCCCT-TAAACTTCCTACC 76
consensus_9550#4      -----------------------------------ATCGGCACGAGGCAAACCTCTTA-- 23
consensus_9550#5      ---------------------AATTGCCCGAG---GTTAAAAGTGTACAAACCCCTTA-- 34
                                                                                  

consensus_9550#0      AGCTGGCCACCATTGCGACGCACGATCTGGCCAAAGTGAAGGGCGCGCTGCGGTACCACG 1140
consensus_9550#1      AGCTGGCCACCATTGCGACGCACGATCTGGCCAAAGTGAAGGGCGCGCTGCGGTACCACG 185
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      -------------------GCTGAACGTGGGCGACAACAAAATCGAACAG--GTGCCCAA 39
consensus_9550#2      CAAAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAA-TCGGCGCG-A 129
consensus_9550#3      CAAAAACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAA-TCGGCGCG-A 134
consensus_9550#4      ----AACCACAACCATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGANAAATCGGCGCG-A 78
consensus_9550#5      -----ACCACAAC-ATGTGGCCCGAGGTGGAAGCCGTGAAGAGTGAAAATCTGGNGCGTA 88
                                                                                  

consensus_9550#0      CTGCA--CCGCCGGCTGAGATTGAAATC-ACCGCGCTTGGCAGCGCCGCCCAGGGTAAGG 1197
consensus_9550#1      CTGCA--CCGCCGGCTGAGATTGAAATC-ACCGCGCTTGGCAGCGCCGCCCAGGGTAAGG 242
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      GTACA--TTGCCAAGTGCGC---GAAAC-TGAAGGGTAAGCGGCAAAGCATGCTTTGATT 93
consensus_9550#2      GCTCAAGCTGACCGGTGCCAGC-GTATC-GGAACGAATTGTGAAAAAC-GGCGG-CAGTC 185
consensus_9550#3      GCTCAAGCTGACCGGTGCCAGC-GTATC-GGAACGAATTGTGAAAAAC-GGCGG-CAGTC 190
consensus_9550#4      GCTCAAGCTGACCGGTGCCAGC-GTATC-GGAACGGATTGTGAAAAAC-GGCGG-CAGTC 134
consensus_9550#5      GCTCAAGCTGACCGGTGCCAGCTGTATCTGGAACGGATTGTGAAAAACTGGCGNGCAGTC 148
                                                                                  

consensus_9550#0      TGACGGCCGAACAGTATTA----CGCCGACCTGTGCCACCAGGCCGAGCTGCTGCGCAAG 1253
consensus_9550#1      TGACGGCCGAACAGTATTA----CGCCGACCTGTGCCACCAGGCCGAGCTGCTGCGCAAG 298
consensus_9550#7      ---------------------------------------------------TGGCCTACT 9
consensus_9550#6      CGATTGTGAGCTTATATTA----TCCTATTTTGTACTTTCTTTTCAA-CAACAACAGAAT 148
consensus_9550#2      TGGACGATGCGGTGTACCAGCTGTCC-GCCCTG-AACCTGCTGGACGTGAATGATACGCC 243
consensus_9550#3      TGGACGATGCGGTGTACCAGCTGTCC-GCCCTG-AACCTGCTGGACGTGAATGATACGCC 248
consensus_9550#4      TGGACGATGCGGTGTACCAGCTGTCC-GCCCTG-AACCTGCTGGACGTGAATGATACGCC 192
consensus_9550#5      TGGACGATGCGGTGTACCAGCTGTCCTGCCCTGTAACCTGCTGGACGTGAATGATACGCC 208
                                                                                  

consensus_9550#0      G-AAAA--GAAGCGCAACACGTA-CTCGGGCGTGCACAAGTACATTACGCTGCTGACG-G 1308
consensus_9550#1      G-AAAA--GAAGCGCAACACGTA-CTCGGGCGTGCACAAGTACATTACGCTGCTGACG-G 353
consensus_9550#7      G-GAAA--AAA-----ATCTGTG-CGGGGATGAAGCGAAACGAATTGTGGTAGAAATG-G 59
consensus_9550#6      T-TAACCTGAAGGGCAACCCGCT-CAAGGATAAACGTTTGCTGAAGCTGGTGGACCAGTG 206
consensus_9550#2      ACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTA 303
consensus_9550#3      ACTGGATCGGATTTCACCACGCATCGAAAGTCTGACTCATCTGCAGTCGCTGCTGCTGTA 308
consensus_9550#4      ACTGGATCGGATTTCACCACGCATCGACAGTCTGACTCATCTGCAGTCGCTGCTGCTGTA 252
consensus_9550#5      ACTGGATCGGATTTCACCACGCATCGACAGTCTGACTCATCTGCAGTCGCTGCTGCTGTA 268
                                *         *   *                       * *      *  

consensus_9550#0      --CG-AGGGAACTGTTTGCGTATCTGAGCGACGAGGAGAAGGTGATCAGCCTGCCGCCGC 1365
consensus_9550#1      --CG-AGGGAACTGTTTGCGTATCTGAGCGACGAGGAGAAGGTGATCAGCCTGCCGCCGC 410
consensus_9550#7      --CCTAAGGCAGAGTTTTCTCATGGATTTTTTTAAACTGAACTCAT--ACTTACCG--AT 113
consensus_9550#6      --CCGCAGCAAGCAGGTGCTCGATTACGTCGAGAAGAACGGGTACC--AACCACCGAAGC 262
consensus_9550#2      ---TCGGAACAAAATT-GCACAA--CTGCCGGCA---ACGATC-GGCCAGCTGGGCGAGC 353
consensus_9550#3      ---TCGGAACAAAATT-GCACAA--CTGCCGGCA---ACGATC-GGCCAGCTGGGCGAGC 358
consensus_9550#4      ---TCGGAACAAAATT-GCACAA--CTGCCGGCA---ACGATC-GGCCAGCTGGGCGAGC 302
consensus_9550#5      ATCTGTGAACAAAATTTGCACAAACTTGCCGGCACACAGAATCTGGCCAGCTGGGCGAGC 328
                                *       *              *                          

consensus_9550#0      TAACGAACTGTGATGAGA--CGAAG-GT-ATCCGCTACCACCACCGATCTGCTGCTCGAG 1421
consensus_9550#1      TAACGAACTGTGATGAGA--CGAAG-GT-ATCCGCTACCACCACCGATCTGCTGCTCGAG 466
consensus_9550#7      TTGCGATTGGGAATAAGATTCTACC-GG-ATTAGCTTACAAAGTGAAATTACT--TTCAG 169
consensus_9550#6      AAACGCCCAAAGAGAATC--CAACC-ACCGTTAGCAACGGGCAGCAGGTGGTTCCACCCC 319
consensus_9550#2      TGAAG---GTGCTCGATC--TGTCC-GGCAACAGGTTG----ACGGAGGTGCCGGGCGAG 403
consensus_9550#3      TGAAG---GTGCTCGATC--TGTCC-GGCAACAGGTTG----ACGGAGGTGCCGGGCGAG 408
consensus_9550#4      TGAAG---GTGCTCGATC--TGTCC-GGCAACAGGTTG----ACGGAGGTGCCGGGCGAG 352
consensus_9550#5      CTGAACGTGTGCTCGACTCTTGTCCTGGCAACAGGCTCTGACGCGAAGGTGCCGGGCGAG 388
                                     *                 *                          

consensus_9550#0      GTG--ACGAGCAGCGTTGGCCATGGGCCGTGCGTGCGCGTCATGAACGTGTTGCTGGAGC 1479
consensus_9550#1      GTG--ACGAGCAGCGTTGGCCATGGGCCGTGCGTGCGCGTCATGAACGTGCTGCTGGAGC 524
consensus_9550#7      TAC--ATAAAGAGCGACA--CGCAAATCACG---ACACGTTTTGAATTTA-TACACGGAT 221
consensus_9550#6      CCA--ATGGAGCGCCAGAGAAAGAGCAGGAAGAAGCTCAGCTTAAAATAATCGTCCGCAA 377
consensus_9550#2      TTT-GGCAAGCTGC-GCTCCCTGACCAC-GCTGAACCTTTCCTTCAATCAGCTCAAGAAG 460
consensus_9550#3      TTT-GGCAAGCTGC-GCTCCCTGACCAC-GCTGAACCTTTCCTTCAATCAGCTCAAGAAG 465
consensus_9550#4      TTT-GGCAAGCTGC-GCTCCCTGACCAC-GCTGAACCTTTCCTTCAATCAGCTCAAGAAG 409
consensus_9550#5      TTTTGGCAAGCTGCTGCTCCCTGACCACTGCTGAACCTTTCCTTCAATCAGCTCAAGAAG 448
                                  **                     *      *  *          *   

consensus_9550#0      GTATGCTGCTGATGGATGTGGAGGTCGTTTCCGGTGGGGTAGCAGCTGCGACCGAGCAGC 1539
consensus_9550#1      GTATGCTGCTGATGGATGTGGAGGTCGTTTCCGGTGGGGTAGCTGCTGCGACCGAGCAGC 584
consensus_9550#7      TTATACAACTAATAAATGTTCTT------------------------------------- 244
consensus_9550#6      AGCGACGGCTAGCGCACCGA---------------------------------------- 397
consensus_9550#2      TT--GGATCTTA-GTGCGCTGGACC-GGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCT 516
consensus_9550#3      TT--GGATCTTA-GTGCGCTGGACC-GGCTGAGCGTTTGCAACCTGTCCGGCAACGAGCT 521
consensus_9550#4      TT--GGAT-TTA-GTGCGCTGGACC-GGCTGAGCGTCTGCAACCTGTCCGGCAACGAGCT 464
consensus_9550#5      TTT-GGATCTTACNTGCGCTGGACCTGGCCT----------------------------- 478
                               *                                                  

consensus_9550#0      CCCCAGCAGCCGGTGAGAGGAAGAAAAAATCGAAAGCCATCGCCAAAGAAGCGGCCGAAC 1599
consensus_9550#1      CCCCAGCAGCCGGTGAGAGGAAGAAAAAATCGAAAGCCATCGCCAAAGAAGCGGCCGAAC 644
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      CGCGGAGGTGCCACAGTTCCACATCGGCGAGGTGCACCATCTAACGGAGGTTAACCTGGA 576
consensus_9550#3      CGCGGAGGTGCCACAGTTCCACATCGGCGAGGTGCAC----------------------- 558
consensus_9550#4      CGCGGAGGTGCCACAGNNCCACATCGGCGAGGTGCACCATCTAACGGAGGTTACCCTGGA 524
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      GGGTGGCAACGGTTCGGTACGATCGAGCCGTGACGCTCACGGTGGAACAGGTGCAGCTGT 1659
consensus_9550#1      GGGTGGCAACGGTTCGGTACGATCGAGCCGTGACGCTCACGGT----------------- 687
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      GAAGAACAGTATCGTGGCGCTGCCGGGAAGACCTTACGCGGC------------------ 618
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      GAAGANCAGTATCGTGGCGCTGCCGGAAA------------------------------- 553
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      ATGACCATGAGGGTAAGCCGCACTCCGTGTTCCCCGGCAAGGGCGATCTGTGCGGGGATG 1719
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      AAGCGAAACGAATTGTGGTAGAAATGGCCTAAGGCAGAGTTTTCTCATGGATTTTTTTAA 1779
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      ACTGAACTCATACTTACCGATTTGCGATTGGGAATAAGATTCTACCGGATTAGCTTACAA 1839
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      AGTGAAATTACTTTCAGTACATAAAGAGCGACACGCAAATCACGACACGTTTTGAATTTA 1899
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      TACACGGATTTATACAACTAATAAATGTTCTTTGGTTGAACTCATGAAAAAAAAGGACTG 1959
consensus_9550#1      ------------------------------------------------------------
consensus_9550#7      ------------------------------------------------------------
consensus_9550#6      ------------------------------------------------------------
consensus_9550#2      ------------------------------------------------------------
consensus_9550#3      ------------------------------------------------------------
consensus_9550#4      ------------------------------------------------------------
consensus_9550#5      ------------------------------------------------------------
                                                                                  

consensus_9550#0      TTTACAATTGTTTATGTTTATCGTATAATAAATTTAAGT 1998
consensus_9550#1      ---------------------------------------
consensus_9550#7      ---------------------------------------
consensus_9550#6      ---------------------------------------
consensus_9550#2      ---------------------------------------
consensus_9550#3      ---------------------------------------
consensus_9550#4      ---------------------------------------
consensus_9550#5      ---------------------------------------