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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9562#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 739 fasta sequence
[CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCTCTGTCCCTATCTACTATCTAGCGAAACCACAGCCATGGCTCCGTCTCGCAAGAATAAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA-GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA-TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT-GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGG-TGGCGGT-GGTT-CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAAAAAAAAAGGC]
[+] EMBL CNS09MQN [CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCTCTGTCCCTATCTACTATCTAGCGAAACCACAGCCATGGCTCCGTCTCGCAAGAATAAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCC ]
[+] EMBL BM615854 [ TCTCGCAAGAATAAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGGGACGGATCTGTCCGGGAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCATTTATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGC ]
[+] EMBL BM600087 [ ccgAAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGGTTGGCGGTGGGTTCCCGGATGTACTACTT ]
[+] EMBL BM649110 [ AAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGAT ]
[-] EMBL CNS098KB [ CAGGTCCGCGACGGTGAGGTCGTTTTCGGCGTTGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATTTGACGGATCTTTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAG TGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGGCAACCCCTTTCCCTGGTTGGTTGGTGGGTGT TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAA ]
[-] EMBL CNS09RUI [ CGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGTATGAAGGTGAAGGCCGATCGTGACGAAGCGTCCCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTCCCCTGGTTGGTTGGTTGGTGG TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAAAAAGGC ]
[-] EMBL AGA281555 [ CGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGT TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATT ]
[-] EMBL CNS0920B [ TTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAAACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGT TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGC]
[+] EMBL CNS08PZO [ GAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGCTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCTCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAA GGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGG TGGCGGT GCTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAggt ]
[-] EMBL AGA284560 [ cgaATCGTGACAAAACTTCCCCGTACCCCGCTATGTTGGCCGCCCA GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGCTGCGCGCTACTGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTTGGTGG TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGSGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAAAAAAAAAAAAAAA ]
[-] EMBL CNS0924Q [ CCGCTATGTTGGCCGCCCA GGATGTGGCCGAAAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGTTGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGG TGGCGGT GCTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAcc ]
[-] EMBL CNS09MQO [ GGATGTGGCCGAGAAGTGCAAATCGCTCGGCATTACCGCACTGCACATTCAAG TGCGCGCTACCGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTGGGTGT TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCAT ]
[+] EMBL BM617255 [ ccGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACA TCAAGCTGCGCGCTACTGGTGGTAACCGCACCAAGACGCCCGGGGCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTTGGTGG TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACC ]
[-] EMBL AGA283605 [ CGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTT GCAACCCCTTTCCCTGGTTGGTTGGTTGGTGG TGGCGGT GGTT CCGGATGTACTACTTACCCTGCAAGGATATTCAGTTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAACCAACCAAAAAAAA ]
consensusID : consensus_9562#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 718 fasta sequence
[CCGCGGACGCGTGGGAGCGCTACCAGCAGCAGCTGAAGGACGTCCAGAGCGCCCTGGAGGAGGAACAGCGCGCCCGCGACGATGCCCGCGAGCAGCTGGGTATCTCGGAGCGCCGTGCCAACGCTCTCCAGAACGAACTGGAGGAGTCGCGCACCCTGTTGGAGCAGGCCGACCGTGGCCGTCGCCAGGCCGAGCAGGAGCTCAGCGATGCTCACGAGCAGCTGAACGAAGTGTCCGCCCAGAACGCTTCGATCGCCGCCGCCAAGAGGAAGCTCGAGTCTGAGCTGCAGACCCTGCACTCCGACCTGGATGAGCTGCTGAACGAGGCCAAGAACTCCGAGGAGAAGGCCAAGAAGGCTATGGTTGATGCCGCTCGTCTGGCTGATGAGCTGCGCGCCGAGCAGGACCATGCCCAGACCCAGGAGAAGCTGCGCAAGGCGCTTGAGCAGCAGATCAAGGAGCTGCAGGTCCGCCTGGATGAGGCCGAATCGAACGCCCTGAAGGGAGGCAAGAAGGCTATCCAGAAGCTGGAGCAGCGCGTCCGCGAGCTCGAGTCGGAGCTGGACAGCGAACAGAGACGACATGCCGATGCCCAGAAGAACCTTGCGCAAGTCGGAGCGTCGCATCAAGGAGCTGACCTTCCAGTCGGAGGAAGACCGCAAGAACCACGAGCGCATGCAGGATCTGGTTGACAAGCTGCAGCAGAAGATCAAGACTT]
[+] EMBL BM630032 [CCGCGGACGCGTGGGAGCGCTACCAGCAGCAGCTGAAGGACGTCCAGAGCGCCCTGGAGGAGGAACAGCGCGCCCGCGACGATGCCCGCGAGCAGCTGGGTATCTCGGAGCGCCGTGCCAACGCTCTCCAGAACGAACTGGAGGAGTCGCGCACCCTGTTGGAGCAGGCCGACCGTGGCCGTCGCCAGGCCGAGCAGGAGCTCAGCGATGCTCACGAGCAGCTGAACGAAGTGTCCGCCCAGAACGCTTCGATCGCCGCCGCCAAGAGGAAGCTCGAGTCTGAGCTGCAGACCCTGCACTCCGACCTGGATGAGCTGCTGAACGAGGCCAAGAACTCCGAGGAGAAGGCCAAGAAGGCTATGGTTGATGCCGCTCGTCTGGCTGATGAGCTGCGCGCCGAGCAGGACCATGCCCAGACCCAGGAGAAGCTGCGCAAGGCGCTTGAGCAGCAGATCAAGGAGCTGCAGGTCCGCCTGGATGAGGCCGAATCGAACGCCCTGAAGGGAGGCAAGAAGGCTATCCAGAAGCTGGAGCAGCGCGTCCGCGAGCTCGAGTCGGAGCTGGACAGCGAACAGAGACGACATGCCGATGCCCAGAAGAACCTTGCGCAAGTCGGAGCGTCGCATCAAGGAGCTGACCTTCCAGTCGGAGGAAGACCGCAAGAACCACGAGCGCATGCAGGATCTGGTTGACAAGCTGCAGCAGAAGATCAAGACTT]
consensusID : consensus_9562#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence
[CCGCCCACGCGTCCGCTTTGACCGTTACAACGTCATCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGCGTGTGGGTGTTCGCGCTGTTCTGGACTCTGGCCCCGCTGTTCGGATGGAACCGATACGTGCCGGAGGGCAACATGACCGCCTGCGGAACCGACTACCTGACCCAGACGTGGCTGAGCCGCTCGTACATCATCATCTACGCCATCTTCGTGTACTGGCTGCCGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACATGCGCGAGCAGGCCAAGAAGATGAACGTCGCCTCGCTGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCGCTGGCCACCATCTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCCGATCGTGTACGGCATCAGCCATCCGAAGTATCGCGCTGCCCTGTACCAGAAGTTCCCGTCGCTATCGTGCCAGGATGCACCAGTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACCCAGGCCTCGGACGAG]
[+] EMBL BM603337 [CCGCCCACGCGTCCGCTTTGACCGTTACAACGTCATCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGCGTGTGGGTGTTCGCGCTGTTCTGGACTCTGGCCCCGCTGTTCGGATGGAACCGATACGTGCCGGAGGGCAACATGACCGCCTGCGGAACCGACTACCTGACCCAGACGTGGCTGAGCCGCTCGTACATCATCATCTACGCCATCTTCGTGTACTGGCTGCCGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACATGCGCGAGCAGGCCAAGAAGATGAACGTCGCCTCGCTGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCGCTGGCCACCATCTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCCGATCGTGTACGGCATCAGCCATCCGAAGTATCGCGCTGCCCTGTACCAGAAGTTCCCGTCGCTATCGTGCCAGGATGCACCAGTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACCCAGGCCTCGGACGAG]
consensusID : consensus_9562#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 546 fasta sequence
[CCGCGGACGCGTGGGCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCAGGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACATCAAGCTGCGCGCTACTGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGCAACCCCTTTCCCTGGTTGGTTGGTTGGTGGGTGGCGGTGGTTCCGGATGTACTACTTACCCTGCAAGGATATTCAGTTAC]
[+] EMBL BM608061 [CCGCGGACGCGTGGGCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTCGTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGATCTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGGCCGATCGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCAGGATGTGGCCGAGAAGTGCAAATCGCTCGGCATCACCGCACTGCACATCAAGCTGCGCGCTACTGGTGGTAACCGCACCAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGTCGATGAAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGCCGCAAGGGTGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGCAACCCCTTTCCCTGGTTGGTTGGTTGGTGGGTGGCGGTGGTTCCGGATGTACTACTTACCCTGCAAGGATATTCAGTTAC]
consensusID : consensus_9562#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 264 fasta sequence
[GTACGTCTTGGCGTAGTGTGGATAGGCAACGGTGTAAAGAGCGTTAACGAGGATGTTAAATTTGTAGATGGTCCGTTGCATATCTGGATGCGGGTAAAAGCTGGTCCCGATGGAACCGGTGGAATAAGCGGCTGCCGTTCGGAGGGGGCGCACGGCCATGGTACGACCGTTCCATGACCGGGGGTCGCCTCAAGCGCAGGCGATTTGGTTTTTTTTGCCGGCAGTTGGCTGGCCGCGAGCAGCGAGCATGCGGGCGGCAGCGGG]
[+] EMBL CNS08I84 [GTACGTCTTGGCGTAGTGTGGATAGGCAACGGTGTAAAGAGCGTTAACGAGGATGTTAAATTTGTAGATGGTCCGTTGCATATCTGGATGCGGGTAAAAGCTGGTCCCGATGGAACCGGTGGAATAAGCGGCTGCCGTTCGGAGGGGGCGCACGGCCATGGTACGACCGTTCCATGACCGGGGGTCGCCTCAAGCGCAGGCGATTTGGTTTTTTTTGCCGGCAGTTGGCTGGCCGCGAGCAGCGAGCATGCGGGCGGCAGCGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9562#0 -----------------CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTC 43
consensus_9562#3 ------------------------------------------------------------
consensus_9562#4 ------------------------------------------------------------
consensus_9562#1 CCGCGGACGCGTGGGAGCGCTACCAGCAGCAGCTGAAGGACGTCCAGAGCGCCCTGGAGG 60
consensus_9562#2 CCGCCCACGCGT-------CCGCTTTGACCGTTACAACGTCATCGTGAAGGGTCTCGCCG 53
consensus_9562#0 CCTCTGTCCCTATCTACTATCTAGCGAAACCACAGCCATGGCTC-CGTCTCGCAA-GAAT 101
consensus_9562#3 -------------------------------------------------CCGCGG-ACGC 10
consensus_9562#4 ------------------------------------------------------------
consensus_9562#1 AGGAACAGCGCGCCCGCGACGATGCCCGCGAGCAGCTGGGTATCTCGGAGCGCCG-TGCC 119
consensus_9562#2 GCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCAT-----TCTGGGCGTGTGGGTGTT 108
consensus_9562#0 AAGGTCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTC 161
consensus_9562#3 GTGGGCGCGAAGGAAGAGGTGCAGGTGTCGCTCGGCCCGCAGGTCCGCGACGGTGAGGTC 70
consensus_9562#4 ------------------------------------------------------------
consensus_9562#1 AACGCTCTCCAGAACGAACTGGAGGAGTCGCGCACCCTGTTGGAGCAGGCCGACCGTGGC 179
consensus_9562#2 CGCGCTGTTCTGGACTCTGGCCCCGCTGTTCGGATGGAACCGATACGTGCCGGAGGGCAA 168
consensus_9562#0 GTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGAT 221
consensus_9562#3 GTGTTCGGCGTGGCACACATCTACGCCAGCTTCAACGATACGTTCGTGCATGTGACGGAT 130
consensus_9562#4 ------------------------------------------------------------
consensus_9562#1 CGTCGCCAGGCCGAGCAGGAGCTCAGCGATGCTCACGAGCAGCTGAACGAAGTGTCCGCC 239
consensus_9562#2 CATGACCGCCTGCGGAACCGACTACCTGA--CCCAGACGTGGCTGAGCCGCTCGTACATC 226
consensus_9562#0 CTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGG---CCGAT 278
consensus_9562#3 CTGTCCGGCAAGGAAACCATCTCCCGGGTGACGGGCGGCATGAAGGTGAAGG---CCGAT 187
consensus_9562#4 ---------------------------------------------------G---TACGT 6
consensus_9562#1 CAGAACGCTTCGATCGCCGCCGCCAAGAGGAAGCTCGAGTCTGAGCTGCAGACCCTGCAC 299
consensus_9562#2 ATCATCTACGCCATCTTCGTGTACTGGCTGCCGCTGCTGACCATCATCTACTCGTACACC 286
consensus_9562#0 CGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCAGGATGTGGCCGAGAAGTGC 338
consensus_9562#3 CGTGACGAAGCGTCGCCGTACGCCGCTATGTTGGCCGCCCAGGATGTGGCCGAGAAGTGC 247
consensus_9562#4 CTTGGCGTAGTGTGGATAGGCAACGGTGTAAAGAGCGTTAACGAGGATGTTAA-ATTTGT 65
consensus_9562#1 TCCGACCTGGATGAGCTGCTGAACGAGGCCAAGAACTCCGAGGAGAAGGCCAAGAAGGCT 359
consensus_9562#2 TTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACATGCGCGAGCAGGCCAAGAAGATG 346
* * * ** * * *
consensus_9562#0 AAATCGCTCGGCAT-TACCGCACTGCACATCAAGCTGCGCGCTACCGGTGGTAACCGCAC 397
consensus_9562#3 AAATCGCTCGGCAT-CACCGCACTGCACATCAAGCTGCGCGCTACTGGTGGTAACCGCAC 306
consensus_9562#4 AGATGGTCCGTTGCATATCTGGATGCGGGTAAAAGC---TGGTCCCGATGG-AACCGGTG 121
consensus_9562#1 ATGGTTGATGCCGCTCGTCTGGCTGATGAGCTGCGCGC-CGAGCAGGACCATGCCCAGAC 418
consensus_9562#2 AACGTCGCCTCGCTGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCC 406
* * * *
consensus_9562#0 CAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGT--CGATG 455
consensus_9562#3 CAAGACGCCCGGCCCGGGTGCCCAGTCGGCGCTCCGTGCGCTCGCCCGTTCGT--CGATG 364
consensus_9562#4 GAATAAGC--GGCT--GCCGTTCGGAGGGGGCGCACGGCCATGGTACGACCGTT-CCATG 176
consensus_9562#1 CCAGGAGA--AGCTGCGCAAGGCGCTTGAGCAGCAGATCAAGGAGCTGCAGGTC-CGCCT 475
consensus_9562#2 AAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATC 466
* * * * * *
consensus_9562#0 AAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGC-CGCAAGGG 514
consensus_9562#3 AAGATCGGCCGCATCGAGGATGTGACCCCGATCCCGTCGGATTCTACCCGC-CGCAAGGG 423
consensus_9562#4 ACCGGGGGTCGCCTCAAGCGCAGG----CGATTT-----GGTTTTTTTTGC-CGGCAGTT 226
consensus_9562#1 GGATGAGGCCGAATCGAACGCCCTGAAGGGAGGCAAGAAGGCTATCCAGAAGCTGGAGCA 535
consensus_9562#2 AACTTCACCGGAATCTTCAAGGCTGCCCCGATC--AGCCCGCTGGCCACCATCTGGGGCT 524
* ** ** * * *
consensus_9562#0 TGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGCAACCCCTTTCCCTGGTT 574
consensus_9562#3 TGGTCGTCGTGGACGTCGTTTGTAAGCGCGCCAACCTGTTTGCAACCCCTTTCCCTGGTT 483
consensus_9562#4 GGCTGGCCGCGAGCAGCGAGCATGCGGGCGGCAGCGGG---------------------- 264
consensus_9562#1 GCGCGTCCGCGAGC-TCGAGTCGGAGCTGGACAGCGAACAGAGACGACATGCCGATGCCC 594
consensus_9562#2 CGCTGTTCGCCAAGGCCAACGCCGTCTACAACC-CGATCGTGTACGGCAT--CAGCCATC 581
** * * *
consensus_9562#0 GGTTGGTGGGTG-G-TGGCGGTGGTTCCGGATGTACTACTTACCCTGCAAGGATATTCAG 632
consensus_9562#3 GGTTGGTTGGTG-GGTGGCGGTGGTTCCGGATGTACTACTTACCCTGCAAGGATATTCAG 542
consensus_9562#4 ------------------------------------------------------------
consensus_9562#1 AGAAGAACCTTGCGCAAGTCGGAGCGTCGCATCAAGGAGCTGACCTTCCAGTCGGAGGAA 654
consensus_9562#2 CGAAGTATCGCG-CTGCCCTGTACCAGAAGTTCCCGTCGCTATCGTGCCAGGATGCACCA 640
consensus_9562#0 TTACGGAGCATTGCGGCGTATTCGGTTGTGGCGAATGATTAATAAACCATAAAGCAACAA 692
consensus_9562#3 TTAC-------------------------------------------------------- 546
consensus_9562#4 ------------------------------------------------------------
consensus_9562#1 GACCGCAAGAACCACGAGCGCATGCAGGATCTGGTTGACAAGCTGCAGCAGAAGATCAAG 714
consensus_9562#2 GTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACC--CAGGCCTCGGACGAG------- 691
consensus_9562#0 CCAACCAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAAAAAAAAAGGC 739
consensus_9562#3 -----------------------------------------------
consensus_9562#4 -----------------------------------------------
consensus_9562#1 ACTT------------------------------------------- 718
consensus_9562#2 -----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||