These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9571#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 955 fasta sequence [GGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGAGAG-CGCCGAGCTGTCAAAATCAGCCGTCGGGCATGCGCTCGGTTGTGGCGTTTGTTTACAGTGCGCCGTACACACGGGGCCATATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGATTAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCG] [-] EMBL CNS08F8P [GGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGAGAGACGCCGAGCTGTCAAAATCAGCCGTCGGGCATGCGCTCGGTTGTGGCGTTTGTTTACAGTGCGCCGTACACACGGGGCCATATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAACCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGG CGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAG ] [+] EMBL CNS08F8O [ ACTGGGAGAG GGAAGAGCTGTCAAAATCAGCCGTCGGGCATGCGCTCGGTTGTGGCGTTTGTTTACAGTGCGCCGTACACACGGGGCCATATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAACCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGC ACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGATTAAAAAAAAAAAATAAAAAAAAGGCCACATGTGCCCG] [+] EMBL CNS09G1B [ ctggagCGTCTTGCATGCGCTCGGTTGTGGCGTTTGTTTACAGTGCGCCGTACACACGGGGCCATATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAA TCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTC ] [+] EMBL BM656189 [ ccGCATGCGCTCGGTTGTGGCGTTTGTTTACAGTGCGCCGTACACACGGGGCCATATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGTGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTTACAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGG ] [+] EMBL CNS091DN [ cttacTGG GTTT TTTTCAGTGCGCCGTACACACGGGGCCATATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGG ] [-] EMBL CNS091DO [ CAAACGGCAGGGCTGCACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGNTTAAAAAAAAAAAAAAAAggc ] [-] EMBL AGA281262 [ AACTGCATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCATTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGGCTMGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCTGTCACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTWATTCACAAATCGATTAAAAAAAAAAAAAAAAAAAA ] consensusID : consensus_9571#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 880 fasta sequence [CCATATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGATTAAAAC--AAAATAGTTCTCTTTTCACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCT] [+] EMBL CNS09LPU [CCATATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGA TAAAAC AAAATAGTTCTCTTTTCACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCT] [-] EMBL CNS09G1C [ AAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGGACATACGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACAAACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGGGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGG CGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCCACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGATTAAAACAAAAAATAGTTCTC TTTCAC AAAA ] [+] EMBL AGA282883 [ ACCGTTTAACAAAGAACAATTCTTTCTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATACGTAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTCGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCATAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGCATCATCATCACCGACCGGGACGGCGTGC ] [+] EMBL BX617167 [ GGCTCCATAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGCATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCATTCCACACCACCTTCACGATGGCGACGGAGCAGTCTAACAAGCTCGGGCTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCTGTCACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCG ] [+] EMBL BX625889 [ CGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACTTCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGATTAAAAC AAAATAGTTCTCTTTTCACTTA ] [+] EMBL BM615704 [ CGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGACGCGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCATATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAA ] [-] EMBL CNS09LPV [ AGCTCGGACTGGGCCGTAACCGGGACATCATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACAAACTGGCCCTGGACCAGCAAATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAAT ] consensusID : consensus_9571#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 784 fasta sequence [GCAGATCGGCACGAGGCGACAACGGCAGGGCTGCACATACGTAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTCGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCATAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGCATCATCATCACCGACCGGGACGGCGTGCCGCTATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCATTCCACACCACCTTTCACGATGCGACGGAGCAGTCGAACAAGCTCGGGCTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGTGGTGCAGATAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCTGTCACGGAAACGTGAAAGGGGCCTCTTCCCCCGGGGTCGGTGCGCGTTTCGGTCAACGGCTTTCGAAGGCTTTCCGAGTGCAACTCCCCAAATTGNTTGNCCGTCNGAGGATAAAAANGTTTATTCACCACAATTCGATTTAAAACCACAACACACAAAGAGAAAACAGGGCATTTTTCGGC] [+] EMBL BX467325 [GCAGATCGGCACGAGGCGACAACGGCAGGGCTGCACATACGTAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCTTATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGCAAAAAACACACACACCAACACACTCGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCATAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGCATCATCATCACCGACCGGGACGGCGTGCCGCTATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCATTCCACACCACCTTTCACGATGCGACGGAGCAGTCGAACAAGCTCGGGCTGGGCCGTAACCGGAACATCATCTCCGTCTACACCGGCTACCAGTGGTGCAGATAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCTGTCACGGAAACGTGAAAGGGGCCTCTTCCCCCGGGGTCGGTGCGCGTTTCGGTCAACGGCTTTCGAAGGCTTTCCGAGTGCAACTCCCCAAATTGNTTGNCCGTCNGAGGATAAAAANGTTTATTCACCACAATTCGATTTAAAACCACAACACACAAAGAGAAAACAGGGCATTTTTCGGC] consensusID : consensus_9571#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 582 fasta sequence [CTGTTGGCCTACTGGATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATC-A-TCT-CCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACAT-ACTGGCC-C-TGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCT-CCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGNTTAAAAAAAAAAAAAAAAGGCAAAAAAAAAAAAAAAAAAGGCCAAATGGGCCCG] [-] EMBL CNS0929S [CTGTTGGCCTACTGGATTCGAAAGGGCTCCGAAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATC A TCT CCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACAT ACTGGCC C TGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCT CCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGNTTAAAAAAAAAAAAAAAAGGC ] [+] EMBL CNS0929R [ ctTACTGGATTCG AAGGGCTCCGAAGTTCCGAAAGAC AAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATC A TCT CCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACAT ACTGGCC C TGGACCAGCAGATCGAG ] [+] EMBL CNS08DFH [ TGACGGACGATGTGAAGCGGTTTTTCCACAACATCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGCTGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCACCTTCACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATCGAGTCTCCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACGTTCATCGGCACGGAAAGCTGCAACATCGGCCACATGACTGGCCGCGTGGACCAGCAGATCGAGCTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAAGGCCTCTCCCCCGGTCGTGCGCGTTCGTCACGCTTCGAGCTTCGAGTGCAACTCCCAAATGTGCCGTCAGAGGATAAAAGTTTATTCACAAATCGATTAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGGGCCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9571#1 ------------------------------------------------------------ consensus_9571#3 ------------------------------------------------------------ consensus_9571#0 GGCTGCGGAATTCCTCGAGCACTGTTGGCCTACTGGGAGAGCGCCGAGCTGTCAAAATCA 60 consensus_9571#2 ------------------------------------------------------------ consensus_9571#1 ---------------------------------------------------------CCA 3 consensus_9571#3 ------------------------------------------------------------ consensus_9571#0 GCCGTCGGGCATGCGCTCGGTTGTGGCGTTTGTTTACAGTGCGCCGTACACACGGGGCCA 120 consensus_9571#2 ------------------------------------------------------------ consensus_9571#1 TATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTT 63 consensus_9571#3 ------------------------------------------------------------ consensus_9571#0 TATTTTCGAAGAAAAAGAAAAACTCATAAATTGGCACCGTTTAATAAAGAACAATTCTTT 180 consensus_9571#2 ------------------------------------------------------------ consensus_9571#1 CTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATA 123 consensus_9571#3 ------------------------------------------------------------ consensus_9571#0 CTTTTTAAAATAAAAAGTGGCCCAAGGGGCAGTGAGCGACAAACGGCAGGGCTGCACATA 240 consensus_9571#2 --------------------GCAGATCGGCACGAGGCGACAA-CGGCAGGGCTGCACATA 39 consensus_9571#1 CGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCT 183 consensus_9571#3 ------------------------------------------------------------ consensus_9571#0 CGCAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCT 300 consensus_9571#2 CGTAATATGGTTGCCGTGGAGAAATGACGCTGCGAGCTGTCATAAGTGTGTGTATTTTCT 99 consensus_9571#1 TATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGC 243 consensus_9571#3 ------------------------------------------------------------ consensus_9571#0 TATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGC 360 consensus_9571#2 TATCAAAACGTAATCTGTTTGGCGGTTAGAAGAGGAGGGCAAAACTTTACGGAAAAGGGC 159 consensus_9571#1 AAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCG 303 consensus_9571#3 -----------------------------CTGTTGGCCTACTGGATTCGAAAGGGCTCCG 31 consensus_9571#0 AAAAAACACACACACCAACACACTTGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCG 420 consensus_9571#2 AAAAAACACACACACCAACACACTCGCAAACGCAACCTCTCCGCATTCGAAAGGGCTCCA 219 * * * * *************** consensus_9571#1 AAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACA 363 consensus_9571#3 AAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACA 91 consensus_9571#0 AAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACA 480 consensus_9571#2 TAGTTCCGAAAGACGAAGCCTCCAGCATGACGGACGATGTGAAGCGGTTTTTCCACAACA 279 *********************************************************** consensus_9571#1 TCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGC 423 consensus_9571#3 TCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGC 151 consensus_9571#0 TCCGGAAACGTGTTGCCGGGCTGAACTGTATCATCATCACCGACCGGGACGGCGTGCCGC 540 consensus_9571#2 TCCGGAAACGTGTTGCCGGGCTGAACTGCATCATCATCACCGACCGGGACGGCGTGCCGC 339 **************************** ******************************* consensus_9571#1 TGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCA 483 consensus_9571#3 TGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCA 211 consensus_9571#0 TGATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCGTTCCACACCA 600 consensus_9571#2 T-ATGAAGGTGGGCGACGACAAATCGCTCGGCATGATCATGAAGCCATCATTCCACACCA 398 * *********************************************** ********** consensus_9571#1 CCTT-CACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATC 542 consensus_9571#3 CCTT-CACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATC 270 consensus_9571#0 CCTT-CACGATGGCGACGGAGCAGTCGAACAAGCTCGGACTGGGCCGTAACCGGAACATC 659 consensus_9571#2 CCTTTCACGATG-CGACGGAGCAGTCGAACAAGCTCGGGCTGGGCCGTAACCGGAACATC 457 **** ******* ************************* ********************* consensus_9571#1 ATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACG 602 consensus_9571#3 ATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACG 330 consensus_9571#0 ATCTCCGTCTACACCGGCTACCAGGTGGTGCAGATGAACAAGCTGCCCCTGCTCGTCACG 719 consensus_9571#2 ATCTCCGTCTACACCGGCTACCAG-TGGTGCAGAT-AACAAGCTGCCCCTGCTCGTCACG 515 ************************ ********** ************************ consensus_9571#1 TTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAG 662 consensus_9571#3 TTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAG 390 consensus_9571#0 TTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAG 779 consensus_9571#2 TTCATCGGCACGGAAAGCTGCAACATCGGCCACATACTGGCCCTGGACCAGCAGATCGAG 575 ************************************************************ consensus_9571#1 CTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAA---GGCCTCTCCCC--- 716 consensus_9571#3 CTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAA---GGCCTCTCCCC--- 444 consensus_9571#0 CTGGTGCTGGACGAGGTGAAGGTGGCCGTTACGGAAACGTGAA---GGCCTCTCCCC--- 833 consensus_9571#2 CTGGTGCTGGACGAGGTGAAGGTGGCTGTCACGGAAACGTGAAAGGGGCCTCTTCCCCCG 635 ************************** ** ************* ******* *** consensus_9571#1 -GGTCG-TGCGCGTTC--GTCA-CG--CTTCGAG----CTTCGAGTGCAACTCCCAAA-- 763 consensus_9571#3 -GGTCG-TGCGCGTTC--GTCA-CG--CTTCGAG----CTTCGAGTGCAACTCCCAAA-- 491 consensus_9571#0 -GGTCG-TGCGCGTTC--GTCA-CG--CTTCGAG----CTTCGAGTGCAACTCCCAAA-- 880 consensus_9571#2 GGGTCGGTGCGCGTTTCGGTCAACGGCTTTCGAAGGCTTTCCGAGTGCAACTCCCCAAAT 695 ***** ******** **** ** ***** * ************** ** consensus_9571#1 TGT---GCCGTCAGAGGATAAAA--GTTTATTCAC---AAATCGATTAAAACAAAATAGT 815 consensus_9571#3 TGT---GCCGTCAGAGGATAAAA--GTTTATTCAC---AAATCGNTTAAAA--------- 534 consensus_9571#0 TGT---GCCGTCAGAGGATAAAA--GTTTATTCAC---AAATCGATTAAAA--------- 923 consensus_9571#2 TGNTTGNCCGTCNGAGGATAAAAANGTTTATTCACCACAATTCGATTTAAA--------- 746 ** ***** ********** ********** ** *** ** *** consensus_9571#1 TCTCTTTTCACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCC 875 consensus_9571#3 -------------AAAAAAAAAAAAGGCAAAAAAAAAAAAAAAAAAGGCCAAATGGGCCC 581 consensus_9571#0 -----------------------------AAAAAAAAAAAAAAAAAGGCCACATGTGCCC 954 consensus_9571#2 ---------------------ACCACAACACACAAAGAGAAAACAGGGCATTTTTCGGC- 784 * * *** * **** * *** * * * consensus_9571#1 GAGCT 880 consensus_9571#3 G---- 582 consensus_9571#0 G---- 955 consensus_9571#2 ----- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||