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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9576#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1583 fasta sequence
[ACCATATGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATT-AAAAAGAGGCGGAAATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTAT-CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT-CCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCT-GCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC-GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT-CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT-GCTTGAAGAA-GGCGCACA-GCACCGACTT-GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA-CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGCAATGGAAATGGCACAACAATTCAGCCAAAAACACCGG]
[+] EMBL CNS08G92 [ACCATATGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATT AAAAAGAGGCGGAAATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTAT CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT CCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCT GCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTTTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGA ]
[+] EMBL CNS08G8G [cCCATATGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATT AAAAAGAGGCGGAAATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTATCCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT CCTTCAGCTTGCCCTCCTCCTCCTTCTGCACCTTctta ]
[+] EMBL CNS08G77 [ TGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATT AAAAAGAGGCGGAAATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACGGTGTGAGTTTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTAT CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCCCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT TTTTTTTTTTTTCTCCTCCTCCTTCGGCAGCg ]
[+] EMBL CNS09LYP [ GAACAATTTATCTTTATTACACTTTATGCTTTTAATTAAAAAAGAGGCGGAAACATTCGGGAGAGTGGCGAC AAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCGATTCGTTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGTCTCGTTCGAAGTTCCACCGCCATTGTTTTCGTCCTCGTCGTCATCGTCATCGCTTAGGTCGTCGTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCt ]
[-] EMBL BX620295 [ GCGGTATCTTATCACGA TTTTCACTCGCGTCGTTNGAAGCTCCACCGCCATNGTTTTCGTCCTCGTCGTCATCGTCATCGCTAAGGTCGTCGTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTAT CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT CCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCT GCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCT ]
[-] EMBL BX629099 [ CAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTAT CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT CCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCT GCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGT ]
[-] EMBL CNS08G8F [ TCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGATTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCCTTCAG TTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGGCA CTTGCGCTTCTTCCACGCCTTTTACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCCCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTCGGGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAACGGCGCACACGCACCGACTT GGGATCGGCGCCCGCct ]
[-] EMBL CNS09LYO [ GATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCATTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACCGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGCAA ]
[-] EMBL CNS08G91 [ TCGGCCTTCTGGGTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCGGCGCCCGCCTCCAGCTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAAATGAACTTTTGCTGCTT GCTCCTTTTT TTTTTCA ]
[-] EMBL CNS08G76 [ TCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACATGCGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCGGCGCCCGCCTCCAGCTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAAATGAACTTTTGCTGCTT GCTCCTTTTTTTTT ]
[-] EMBL BM629239 [ CGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTTACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGACCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTTTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAAGGAAATTTATAGTA AAAACTGGCAATCTGTGCAATGGAAATGGCACAACAATTCAGCCAAAAACACCGG]
[-] EMBL BM607095 [ GCAGATGATAGTGGTCGTCGGCATCGTATTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACCGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGCAATGGAAATGGCACAACAATTCAGCCcgg ]
[-] EMBL BM596744 [ GTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACCGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGACCCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGCAATGGAAATGGCACAACAATTCgg ]
[-] EMBL CNS0993D [ GTCCCCCTTCGTGCAGGTGCCCTGGCTTGAAGAA GGCGCACA GCACCGACTTGGGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAAC ]
consensusID : consensus_9576#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 763 fasta sequence
[GAGNAACAGGGTTCTCTCCGCTCGATCCGGTTCCCGATNGTCTTTCCAACCGNGCCCNGNCGGCATCGCCTTCANATCGGCCGTTAGCCGTCGGCAAGCCAGTTCGGACTGCCCTGCTTTCCNGCNGTGCATCTTTTTCCCCANTCCGGATCCGGTTTCAGCGGACCGTGCCATGTGTTATCGGACGTCCTTGATGNTGAGACTGAGCATGTTCAAATCCAGCCTCCCTGTATTCGTTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGACTTCGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCACGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACTGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTCGGCCAGCTCANTCGTGCGGAATTCTTGCCT]
[-] EMBL BX468184 [GAGNAACAGGGTTCTCTCCGCTCGATCCGGTTCCCGATNGTCTTTCCAACCGNGCCCNGNCGGCATCGCCTTCANATCGGCCGTTAGCCGTCGGCAAGCCAGTTCGGACTGCCCTGCTTTCCNGCNGTGCATCTTTTTCCCCANTCCGGATCCGGTTTCAGCGGACCGTGCCATGTGTTATCGGACGTCCTTGATGNTGAGACTGAGCATGTTCAAATCCAGCCTCCCTGTATTCGTTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGACTTCGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCACGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACTGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTCGGCCAGCTCANTCGTGCGGAATTCTTGCCT]
consensusID : consensus_9576#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 592 fasta sequence
[CTCTCTCGATTCGTTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCATCGTCATCGCTTAGGTCGTCGTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCAGCTTGCGCTCCTCCTGCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGCCCACGCGTCCGCGG]
[-] EMBL BM602432 [CTCTCTCGATTCGTTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCATCGTCATCGCTTAGGTCGTCGTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCAGCTTGCGCTCCTCCTGCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGCCCACGCGTCCGCGG]
consensusID : consensus_9576#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 548 fasta sequence
[GTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCTTCTGTTTCATTCTAAACTTCTGCGG]
[-] EMBL BM605315 [GTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCTTCTGTTTCATTCTAAACTTCTGCGG]
consensusID : consensus_9576#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence
[TTCAAATCCAGCTCCCCGTGTATTCGGTTGCATCGGTCATCGTCCTCGTTGCGCCGTACGACTCGACCGCTTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCGTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTTGAAGTCCCTTCCAGCTTTGCGCTCCTCCTCCTTCTGGCAGCTTGTCCTTCGTTCTCCTGCAGCTTGCGCTTCTTCCACGCCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACAGTTCGACTGCGTCGAGGAAGTATTGCAGATGATAGTGAACCTCGTGCGCGATTCTG]
[-] EMBL AL697131 [TTCAAATCCAGCTCCCCGTGTATTCGGTTGCATCGGTCATCGTCCTCGTTGCGCCGTACGACTCGACCGCTTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCGTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTTGAAGTCCCTTCCAGCTTTGCGCTCCTCCTCCTTCTGGCAGCTTGTCCTTCGTTCTCCTGCAGCTTGCGCTTCTTCCACGCCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACAGTTCGACTGCGTCGAGGAAGTATTGCAGATGATAGTGAACCTCGTGCGCGATTCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9576#0 ACCATATGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATTAAAAAGAGGCGGAA 60
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 ATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCT 120
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 AGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACG 180
consensus_9576#2 ---------------------------------CTCTCTCGATTCGTTTTGCATGAAACG 27
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 GTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGT 240
consensus_9576#2 GTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGT 87
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 TCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCC 300
consensus_9576#2 TCCACCGCCGTTGTTTTCGTCCTCGTCGTCATCGTCATCGCTTAGGTCGTCGTCCAATCC 147
consensus_9576#3 ---------------------------------------------------GTCCAATCC 9
consensus_9576#1 ---------------------------------------------GAGNAACAGGGTTCT 15
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 TTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGC 360
consensus_9576#2 TTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGC 207
consensus_9576#3 TTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGC 69
consensus_9576#1 CTCCGCTCGATCCGGTTCCCGATNGTCTTTCCAACCGNGCCCNGNCGGCATCGCCTTCAN 75
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 CCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGC 420
consensus_9576#2 CCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGC 267
consensus_9576#3 CCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGC 129
consensus_9576#1 ATCGGCCGTTAGCCGTCGGCAAGCCAGTTCGGACTGCCCTGCTTTCCNGCNGTGCATCTT 135
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 TGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTATCGACGTCCTTGAT 480
consensus_9576#2 TGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGAT 327
consensus_9576#3 TGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGAT 189
consensus_9576#1 TTTCCCCANTCCGGATCCGGTTTCAGCGGACCGTGCCATGTGTTATCGGACGTCCTTGAT 195
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 GTTGAGACTGAGCATGTTCAAATCCAGCTCCC--TGTATTCGGTTGCATCG-TCATCGTC 537
consensus_9576#2 GTTGAGACTGAGCATGTTCAAATCCAGCTCCC--TGTATTCGGTTGCATCG-TCATCGTC 384
consensus_9576#3 GTTGAGACTGAGCATGTTCAAATCCAGCTCCC--TGTATTCGGTTGCATCG-TCATCGTC 246
consensus_9576#1 GNTGAGACTGAGCATGTTCAAATCCAGCCTCCC-TGTATTCGTTTGCATCG-TCATCGTC 253
consensus_9576#4 ----------------TTCAAATCCAGCTCCCCGTGTATTCGGTTGCATCGGTCATCGTC 44
************ ** ******** ******** ********
consensus_9576#0 CTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 597
consensus_9576#2 CTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 444
consensus_9576#3 CTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 306
consensus_9576#1 CTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 313
consensus_9576#4 CTCGTTGCG-CCGTACGACTCGACCGCTTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 103
****** ** *********** ***** ********************************
consensus_9576#0 CGGATT--GAAGCTGAACATC-TCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTT-GA 653
consensus_9576#2 CGGATT--GAAGCTGAACATC-TCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTT-GA 500
consensus_9576#3 CGGATT--GAAGCTGAACATC-TCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTT-GA 362
consensus_9576#1 CGGACTTCGAAGCTGAACATC-TCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTT-GA 371
consensus_9576#4 CGGATT--GAAGCTGAACATCGTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTTGA 161
**** * ************* *********************************** **
consensus_9576#0 AGTCCTT--CAG-CTTGCGCTCCTCCT-CCTTCTG-CAGCTTGTCCTTC-TTCTCCTGCA 707
consensus_9576#2 AGTCCTT--CAG-CTTGCGCTCCTCCTGCCTTCTG-CAGCTTGTCCTTC-TTCTCCTGCA 555
consensus_9576#3 AGTCCTT--CAG-CTTGCGCTCCTCCT-CCTTCTG-CAGCTTGTCCTTC-TTCTCCTGCA 416
consensus_9576#1 AGTCCTTCACG--CTTGCGCTCCTCCT-CCTTCTG-CAGCTTGTCCTTC-TTCTCCTGCA 426
consensus_9576#4 AGTCCCTTCCAGCTTTGCGCTCCTCCT-CCTTCTGGCAGCTTGTCCTTCGTTCTCCTGCA 220
***** * * ************* ******* ************* **********
consensus_9576#0 GCTTGCGCTTCTTCCACGCC-AGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCG 766
consensus_9576#2 GCTTGCGCTTCTTCCACGCC-AG--CCCACGCGTCCGCGG-------------------- 592
consensus_9576#3 GCTTGCGCTTCTTCCACGCC-AGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCG 475
consensus_9576#1 GCTTGCGCTTCTTCCACGCC-AGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCG 485
consensus_9576#4 GCTTGCGCTTCTTCCACGCCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCG 280
******************** ** * * ** ** *
consensus_9576#0 AGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCG 826
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 AGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCTTCTGTTTCATTC 535
consensus_9576#1 AGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCG 545
consensus_9576#4 AGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCG 340
consensus_9576#0 GCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACAC 886
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 TAAACTTCTGCGG----------------------------------------------- 548
consensus_9576#1 GCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACAC 605
consensus_9576#4 GCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTG-CGGTAGATACAC 399
consensus_9576#0 TTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGG 946
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 TTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAAC-GTTCGACTGCGTCGAG 664
consensus_9576#4 TTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACAGTTCGACTGCGTCGAG 459
consensus_9576#0 AAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCC 1006
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 GAAGTATTTGCAGATGATAGTGGTCGTCG-GCATCGTTTTCTCTTTGCCGTGCTTTTTGG 723
consensus_9576#4 GAAGTATT-GCAGATGATAGTGAACCTCGTGCGCGATTCTG------------------- 499
consensus_9576#0 ACCACCTCGGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACATCGGCATCG 1066
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 CCACCACCTCGGCCAGCTCANTCGTGCGGAATTCTTGCCT-------------------- 763
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 CGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAA 1126
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 AACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCTGCTTGAAGAAGGCGCACAGCACCGAC 1186
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 TTGGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGACCGGCTTGAACAGCTTGGCCAGC 1246
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 TCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCA 1306
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 AGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGC 1366
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 TTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTC 1426
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 TTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTT 1486
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 ACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGC 1546
consensus_9576#2 ------------------------------------------------------------
consensus_9576#3 ------------------------------------------------------------
consensus_9576#1 ------------------------------------------------------------
consensus_9576#4 ------------------------------------------------------------
consensus_9576#0 AATGGAAATGGCACAACAATTCAGCCAAAAACACCGG 1583
consensus_9576#2 -------------------------------------
consensus_9576#3 -------------------------------------
consensus_9576#1 -------------------------------------
consensus_9576#4 -------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||