These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9576#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1583 fasta sequence [ACCATATGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATT-AAAAAGAGGCGGAAATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTAT-CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT-CCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCT-GCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC-GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT-CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT-GCTTGAAGAA-GGCGCACA-GCACCGACTT-GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA-CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGCAATGGAAATGGCACAACAATTCAGCCAAAAACACCGG] [+] EMBL CNS08G92 [ACCATATGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATT AAAAAGAGGCGGAAATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTAT CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT CCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCT GCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTTTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGA ] [+] EMBL CNS08G8G [cCCATATGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATT AAAAAGAGGCGGAAATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTATCCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT CCTTCAGCTTGCCCTCCTCCTCCTTCTGCACCTTctta ] [+] EMBL CNS08G77 [ TGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATT AAAAAGAGGCGGAAATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACGGTGTGAGTTTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTAT CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCCCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT TTTTTTTTTTTTCTCCTCCTCCTTCGGCAGCg ] [+] EMBL CNS09LYP [ GAACAATTTATCTTTATTACACTTTATGCTTTTAATTAAAAAAGAGGCGGAAACATTCGGGAGAGTGGCGAC AAAAAAACAGAACCCTAACGACGACGTTGTGCACTCTAGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCGATTCGTTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGTCTCGTTCGAAGTTCCACCGCCATTGTTTTCGTCCTCGTCGTCATCGTCATCGCTTAGGTCGTCGTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCt ] [-] EMBL BX620295 [ GCGGTATCTTATCACGA TTTTCACTCGCGTCGTTNGAAGCTCCACCGCCATNGTTTTCGTCCTCGTCGTCATCGTCATCGCTAAGGTCGTCGTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTAT CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT CCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCT GCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCT ] [-] EMBL BX629099 [ CAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTAT CGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGT CCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCT GCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGT ] [-] EMBL CNS08G8F [ TCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTACGGCCGTACGATTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCCTTCAG TTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGGCA CTTGCGCTTCTTCCACGCCTTTTACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCCCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTCGGGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAACGGCGCACACGCACCGACTT GGGATCGGCGCCCGCct ] [-] EMBL CNS09LYO [ GATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCATTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACCGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGCAA ] [-] EMBL CNS08G91 [ TCGGCCTTCTGGGTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCGGCGCCCGCCTCCAGCTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAAATGAACTTTTGCTGCTT GCTCCTTTTT TTTTTCA ] [-] EMBL CNS08G76 [ TCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACATGCGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCGGCGCCCGCCTCCAGCTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAAATGAACTTTTGCTGCTT GCTCCTTTTTTTTT ] [-] EMBL BM629239 [ CGACCGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTTACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGACCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTTTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAAGGAAATTTATAGTA AAAACTGGCAATCTGTGCAATGGAAATGGCACAACAATTCAGCCAAAAACACCGG] [-] EMBL BM607095 [ GCAGATGATAGTGGTCGTCGGCATCGTATTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACCGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGCAATGGAAATGGCACAACAATTCAGCCcgg ] [-] EMBL BM596744 [ GTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTC GGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACAT CGGCATCGCGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACCGCCGGGTCGTGCGAAAACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCT GCTTGAAGAA GGCGCACA GCACCGACTT GGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGACCCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTCTTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTTACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGCAATGGAAATGGCACAACAATTCgg ] [-] EMBL CNS0993D [ GTCCCCCTTCGTGCAGGTGCCCTGGCTTGAAGAA GGCGCACA GCACCGACTTGGGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGA CCGGCTTGAACAGCTTGGCCAGCTCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCAAGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGCTTGGCTCCTTTTTTGTTTTTCAAC ] consensusID : consensus_9576#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 763 fasta sequence [GAGNAACAGGGTTCTCTCCGCTCGATCCGGTTCCCGATNGTCTTTCCAACCGNGCCCNGNCGGCATCGCCTTCANATCGGCCGTTAGCCGTCGGCAAGCCAGTTCGGACTGCCCTGCTTTCCNGCNGTGCATCTTTTTCCCCANTCCGGATCCGGTTTCAGCGGACCGTGCCATGTGTTATCGGACGTCCTTGATGNTGAGACTGAGCATGTTCAAATCCAGCCTCCCTGTATTCGTTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGACTTCGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCACGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACTGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTCGGCCAGCTCANTCGTGCGGAATTCTTGCCT] [-] EMBL BX468184 [GAGNAACAGGGTTCTCTCCGCTCGATCCGGTTCCCGATNGTCTTTCCAACCGNGCCCNGNCGGCATCGCCTTCANATCGGCCGTTAGCCGTCGGCAAGCCAGTTCGGACTGCCCTGCTTTCCNGCNGTGCATCTTTTTCCCCANTCCGGATCCGGTTTCAGCGGACCGTGCCATGTGTTATCGGACGTCCTTGATGNTGAGACTGAGCATGTTCAAATCCAGCCTCCCTGTATTCGTTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGACTTCGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCACGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACTGCGTCGAGGAAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCCACCACCTCGGCCAGCTCANTCGTGCGGAATTCTTGCCT] consensusID : consensus_9576#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 592 fasta sequence [CTCTCTCGATTCGTTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCATCGTCATCGCTTAGGTCGTCGTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCAGCTTGCGCTCCTCCTGCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGCCCACGCGTCCGCGG] [-] EMBL BM602432 [CTCTCTCGATTCGTTTTGCATGAAACGGTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGTTCCACCGCCGTTGTTTTCGTCCTCGTCGTCATCGTCATCGCTTAGGTCGTCGTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCAGCTTGCGCTCCTCCTGCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGCCCACGCGTCCGCGG] consensusID : consensus_9576#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 548 fasta sequence [GTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCTTCTGTTTCATTCTAAACTTCTGCGG] [-] EMBL BM605315 [GTCCAATCCTTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGCCCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGCTGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGATGTTGAGACTGAGCATGTTCAAATCCAGCTCCCTGTATTCGGTTGCATCGTCATCGTCCTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTGAAGTCCTTCAGCTTGCGCTCCTCCTCCTTCTGCAGCTTGTCCTTCTTCTCCTGCAGCTTGCGCTTCTTCCACGCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCTTCTGTTTCATTCTAAACTTCTGCGG] consensusID : consensus_9576#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence [TTCAAATCCAGCTCCCCGTGTATTCGGTTGCATCGGTCATCGTCCTCGTTGCGCCGTACGACTCGACCGCTTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCGTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTTGAAGTCCCTTCCAGCTTTGCGCTCCTCCTCCTTCTGGCAGCTTGTCCTTCGTTCTCCTGCAGCTTGCGCTTCTTCCACGCCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACAGTTCGACTGCGTCGAGGAAGTATTGCAGATGATAGTGAACCTCGTGCGCGATTCTG] [-] EMBL AL697131 [TTCAAATCCAGCTCCCCGTGTATTCGGTTGCATCGGTCATCGTCCTCGTTGCGCCGTACGACTCGACCGCTTCGCCATCGTCCGTGCCGTCGTCGATCAGGTCCGGATTGAAGCTGAACATCGTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTTGAAGTCCCTTCCAGCTTTGCGCTCCTCCTCCTTCTGGCAGCTTGTCCTTCGTTCTCCTGCAGCTTGCGCTTCTTCCACGCCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCGAGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCGGCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGCGGTAGATACACTTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACAGTTCGACTGCGTCGAGGAAGTATTGCAGATGATAGTGAACCTCGTGCGCGATTCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9576#0 ACCATATGTGAACAATTTATCTTTATTACACTTTATGCTTTTAATTAAAAAGAGGCGGAA 60 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 ATATCCGGCAGAGTGGCGACAAAAAAAAAACAGAACCCTAACGACGACGTTGTGCACTCT 120 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 AGAAGGATCTAGTAGGCTGCCCTCTCTCTCTATCTCTCTCTATTTGCTTTGCATGAAACG 180 consensus_9576#2 ---------------------------------CTCTCTCGATTCGTTTTGCATGAAACG 27 consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 GTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGT 240 consensus_9576#2 GTGTGAGTGTGGTTCGCTAGCGGTATCTTATCACGATTTTTCACTCGCCTCGTTCGAAGT 87 consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 TCCACCGCCGTTGTTTTCGTCCTCGTCGTCGTCGTCATCGCTTAGGTCGTCGTCTAATCC 300 consensus_9576#2 TCCACCGCCGTTGTTTTCGTCCTCGTCGTCATCGTCATCGCTTAGGTCGTCGTCCAATCC 147 consensus_9576#3 ---------------------------------------------------GTCCAATCC 9 consensus_9576#1 ---------------------------------------------GAGNAACAGGGTTCT 15 consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 TTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGC 360 consensus_9576#2 TTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGC 207 consensus_9576#3 TTCGAGGTCTTCTTCGAGGAACAGGTTCTCGTTGATCGGTGCCGCATCGTTTGCAGCCGC 69 consensus_9576#1 CTCCGCTCGATCCGGTTCCCGATNGTCTTTCCAACCGNGCCCNGNCGGCATCGCCTTCAN 75 consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 CCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGC 420 consensus_9576#2 CCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGC 267 consensus_9576#3 CCCGTCGGCATCGCCCTCAGCGGCGGTAGCGTCGGCAGCAGTTCGACTGGCCGCTTCCGC 129 consensus_9576#1 ATCGGCCGTTAGCCGTCGGCAAGCCAGTTCGGACTGCCCTGCTTTCCNGCNGTGCATCTT 135 consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 TGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTTTTATCGACGTCCTTGAT 480 consensus_9576#2 TGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGAT 327 consensus_9576#3 TGCCATCTTTTCCCATCGATCCGTTTCAGCGACCGTGCCAGTGTTATCGACGTCCTTGAT 189 consensus_9576#1 TTTCCCCANTCCGGATCCGGTTTCAGCGGACCGTGCCATGTGTTATCGGACGTCCTTGAT 195 consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 GTTGAGACTGAGCATGTTCAAATCCAGCTCCC--TGTATTCGGTTGCATCG-TCATCGTC 537 consensus_9576#2 GTTGAGACTGAGCATGTTCAAATCCAGCTCCC--TGTATTCGGTTGCATCG-TCATCGTC 384 consensus_9576#3 GTTGAGACTGAGCATGTTCAAATCCAGCTCCC--TGTATTCGGTTGCATCG-TCATCGTC 246 consensus_9576#1 GNTGAGACTGAGCATGTTCAAATCCAGCCTCCC-TGTATTCGTTTGCATCG-TCATCGTC 253 consensus_9576#4 ----------------TTCAAATCCAGCTCCCCGTGTATTCGGTTGCATCGGTCATCGTC 44 ************ ** ******** ******** ******** consensus_9576#0 CTCGTTACGGCCGTACGACTCAACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 597 consensus_9576#2 CTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 444 consensus_9576#3 CTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 306 consensus_9576#1 CTCGTTGCGGCCGTACGACTCGACCGCCTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 313 consensus_9576#4 CTCGTTGCG-CCGTACGACTCGACCGCTTCGCCATCGTCCGTGCCGTCGTCGATCAGGTC 103 ****** ** *********** ***** ******************************** consensus_9576#0 CGGATT--GAAGCTGAACATC-TCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTT-GA 653 consensus_9576#2 CGGATT--GAAGCTGAACATC-TCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTT-GA 500 consensus_9576#3 CGGATT--GAAGCTGAACATC-TCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTT-GA 362 consensus_9576#1 CGGACTTCGAAGCTGAACATC-TCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTT-GA 371 consensus_9576#4 CGGATT--GAAGCTGAACATCGTCCCTACCGGACAGTCCGTTCTGCCGGCCGGCCTTTGA 161 **** * ************* *********************************** ** consensus_9576#0 AGTCCTT--CAG-CTTGCGCTCCTCCT-CCTTCTG-CAGCTTGTCCTTC-TTCTCCTGCA 707 consensus_9576#2 AGTCCTT--CAG-CTTGCGCTCCTCCTGCCTTCTG-CAGCTTGTCCTTC-TTCTCCTGCA 555 consensus_9576#3 AGTCCTT--CAG-CTTGCGCTCCTCCT-CCTTCTG-CAGCTTGTCCTTC-TTCTCCTGCA 416 consensus_9576#1 AGTCCTTCACG--CTTGCGCTCCTCCT-CCTTCTG-CAGCTTGTCCTTC-TTCTCCTGCA 426 consensus_9576#4 AGTCCCTTCCAGCTTTGCGCTCCTCCT-CCTTCTGGCAGCTTGTCCTTCGTTCTCCTGCA 220 ***** * * ************* ******* ************* ********** consensus_9576#0 GCTTGCGCTTCTTCCACGCC-AGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCG 766 consensus_9576#2 GCTTGCGCTTCTTCCACGCC-AG--CCCACGCGTCCGCGG-------------------- 592 consensus_9576#3 GCTTGCGCTTCTTCCACGCC-AGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCG 475 consensus_9576#1 GCTTGCGCTTCTTCCACGCC-AGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCG 485 consensus_9576#4 GCTTGCGCTTCTTCCACGCCCAGGAACGATTCGAGCGTGACGCGCGTCTGGCTCGGCCCG 280 ******************** ** * * ** ** * consensus_9576#0 AGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCG 826 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 AGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCTTCTGTTTCATTC 535 consensus_9576#1 AGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCG 545 consensus_9576#4 AGTGCCGCCCGCTCGCGCTCAATCAGATCGACCAGCGATATCTCCTCCTTCTGTGATTCG 340 consensus_9576#0 GCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACAC 886 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 TAAACTTCTGCGG----------------------------------------------- 548 consensus_9576#1 GCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTGGCGGTAGATACAC 605 consensus_9576#4 GCCTTCTTTTTGTCCTTCTTCAGCACGTAGCCGGGCGGCAGGGCGTG-CGGTAGATACAC 399 consensus_9576#0 TTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACGTTCGACCGCGTCGAGG 946 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 TTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAAC-GTTCGACTGCGTCGAG 664 consensus_9576#4 TTCTCGCCATTCGGGCACTCCCAGAACCAGCCGTACAGCGAACAGTTCGACTGCGTCGAG 459 consensus_9576#0 AAGTATTTGCAGATGATAGTGGTCGTCGGCATCGTTTTCTCTTTGCCGTGCTTTTTGGCC 1006 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 GAAGTATTTGCAGATGATAGTGGTCGTCG-GCATCGTTTTCTCTTTGCCGTGCTTTTTGG 723 consensus_9576#4 GAAGTATT-GCAGATGATAGTGAACCTCGTGCGCGATTCTG------------------- 499 consensus_9576#0 ACCACCTCGGCCAGCTTCTCCTCGGACCAGTTCTCGATCGTATCGTTCACATCGGCATCG 1066 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 CCACCACCTCGGCCAGCTCANTCGTGCGGAATTCTTGCCT-------------------- 763 consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 CGTATGTCGACGTGTATCGATCGCTTCTCCGACTTGCGCTCCACGGCCGGGTCGTGCGAA 1126 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 AACTTGCACTTGTCCCCCTTCGTGCAGGTGCCCTGCTTGAAGAAGGCGCACAGCACCGAC 1186 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 TTGGGATCAGCGCCCGCTTCCAGTTTCTGCGTCGCGACCGGCTTGAACAGCTTGGCCAGC 1246 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 TCCTTCTGCTCCTTCAGCTTCTTCTCCTTTTCCTCCTTCTTGGCATTGGTGGCCGTGGCA 1306 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 AGGTTATGTTGGCCACCACTCTTGACCTGCTTCTCTACCTGCGAGATGAACTTTTGCTGC 1366 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 TTGGCTCCTTTTTTGTTTTTCAACCCGAACGTTTTATCCTCAATGATTTTCTCCTTTTTC 1426 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 TTCGCTTCCGTCTTCTTCGAGGTTGAAGGTGCTTTCTTTGGAGGCATTTTCCGGCCGGTT 1486 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 ACGTCCCTGTGGGAGGTCTTTTGCTAGGGAAATTTTTAGTAGAAAACTGGCAATCTGTGC 1546 consensus_9576#2 ------------------------------------------------------------ consensus_9576#3 ------------------------------------------------------------ consensus_9576#1 ------------------------------------------------------------ consensus_9576#4 ------------------------------------------------------------ consensus_9576#0 AATGGAAATGGCACAACAATTCAGCCAAAAACACCGG 1583 consensus_9576#2 ------------------------------------- consensus_9576#3 ------------------------------------- consensus_9576#1 ------------------------------------- consensus_9576#4 ------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||