These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9585#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1158 fasta sequence [GGATTTATGCCTCCGAACGGTTAAGG-CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC-AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT------CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG-ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC-GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG-ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT-AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAACACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGATGGGATTGATACCCTTTGGCCACACAATCACAGCGATCGCCGCCAGTAAAAATGGT-TATTTGCAAGACAAAATTAACTTTTTCAAAACCAATAAA] [+] EMBL CNS08ZQL [GGATTTATGCCTCCGAACGGTTAAGGCCCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAATTA AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTT ] [+] EMBL CNS08UA9 [ CCTCCGAACGGTTAAGG CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTTTGGCCGTGTCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCG ] [+] EMBL CNS08VFE [ TCCGAACGGTTAAGG CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTTACATCAACAACAACAACAACCATT ATAACATCCAAATCAACACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGAGCTGATGGGAT ] [+] EMBL CNS08F18 [ ACGGTTAAGG CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCAACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAG ] [+] EMBL CNS08VGD [ GGTTAAGG CCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACAGTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGCTTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGAC ] [+] EMBL CNS08X31 [ aCAGACCAGATCCATCAAAAATGACCAAGAAGGCTGATCCCTATGGCTTCG CAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACCAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCGCGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGGACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACCTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTTTCCTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGCCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCCTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAACACACACT ] [+] EMBL CNS08NTU [ TCCATCGAAAATGAACAAGAAGGCTGAT CCTATGGCTTCG CAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTG CGCCGGTGCCACGTCGCTACCCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTTTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGTTTTGGTGCTCGTATTCTACGACGAAGTTAAAGGCCCTGCTGGGTTAAGACGGGGAACA ] [+] EMBL CNS08CYU [ CATCAAAAATGACCAAGAAGGCTGATCCCTATGGCTTCG CAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACCAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCGCGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATCCGGCGGTGCCGCCGGTGCCAAGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGGACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTTTCCTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAGAACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGCCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCCTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAACACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGAT ] [-] EMBL CNS08VFF [ gttTCTCGAAAACGGCCGTAGCACCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCC AAGCAGATCGCCGTCGACAAGCAGTACAAGGGTATCGTCGATTGCTT CGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATTCCGCGGTGCCGCCGGTGCCACGTCGTTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCAACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGAAACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCCACTGCTGGGTCAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATT ATAACATCCAAATCAAAACACACTTACCGGTAGCGATCGG ] [-] EMBL CNS08CYV [ TCCAAAGCAGATCGCCGTCGACCAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCGCGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGG ATTCCGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGGACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGACGGGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGAAACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTTTCCTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGCCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCCTTTTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAAAACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGATGGGATTGATACCCTTTGGCCACACAATCACAGCGATCGCCGCCAGTAAAAATGGT TATTTGCAAGACAAAATTA ] [-] EMBL CNS08X32 [ TCGCCGTCGACCAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCGCGTTCAAGGATGTGTACAAACAGGTGTTCCTCGGCGGCGTCGACAAGAACACCCAGTTTTGGCGCTACTTCCTGGGTAACCTCGGAATCC GCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTACCCGTCTCGGTGCGGACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGACTGTCTGAAGAAGAC GGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGTGTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACCTCGGTTGCTTCGAAACTGCCAAGGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTTTCCTGGGCCATCGCACAGGTGGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAG ACGACGCATGATGATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGTCAAGATCGCCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCCTTCTCGAACGTCCTGCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTT AAGGCCCTGCTGGGTTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAGCAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAACACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGATGGGATTGATACCCTTTGGCCACACAATCACAGCGATCGCCGCCAGTAAAAATGGTGTATTTGCAAGACAAAATTAACTTTTTCAAAACCAATAAA] consensusID : consensus_9585#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 667 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGAAAAAATAGTGAAAATGATTGACGCCGAGATGGTTATTCCTGATAAGGACGAGTCCGACACGCGAACAATGAAGGACGTTGTGAACCCGCTGGAAGAACCGCTGGAGGAGGATCTTTACATCAAATACAAGAAGCTGCAAAAGATGCTCGAGTTCCTGGAGGTGCAGGAAGAGTACATCAAGGATGAGCAGCGCAACCTGAAGAAGGAGTACCTGCACGCGCAGGAAGAGGTGAAGCGCATCCAGTCGGTGCCGCTCGTAATTGGCCAGTTCCTGGAGGCGGTCGATCAGAACACCGGTATCGTCGGTTCGACCACCGGGTCCAACTACTACGTGCGCATTCTCTCCACCATTGACCGGGAGCTGCTGAAGCCGTCGGCCAGTGTCGCCCTGCACAAGCACAGCAATGCGCTGGTGGACGTTCTGCCACCGGAGGCGGACAGCTCCATCTCGATGCTGAATGCGGACGAAAAGCCGGACGTGCAGTACTCGGACATTGGTGGCATGGACATGCAGAAGCAGGAAATCCGCGAAGCCGTCGAACTGCCGCTGACACACTTCGAGCTGTACAAGCAGATCGGTATTGACCCACCGCGCGGTGTACTGATGTACGGGACCGCCCGGTTGCGGCAAGACAATGT] [+] EMBL BM575734 [CCGCCCACGCGTCCGCCCACGCGTCCGAAAAAATAGTGAAAATGATTGACGCCGAGATGGTTATTCCTGATAAGGACGAGTCCGACACGCGAACAATGAAGGACGTTGTGAACCCGCTGGAAGAACCGCTGGAGGAGGATCTTTACATCAAATACAAGAAGCTGCAAAAGATGCTCGAGTTCCTGGAGGTGCAGGAAGAGTACATCAAGGATGAGCAGCGCAACCTGAAGAAGGAGTACCTGCACGCGCAGGAAGAGGTGAAGCGCATCCAGTCGGTGCCGCTCGTAATTGGCCAGTTCCTGGAGGCGGTCGATCAGAACACCGGTATCGTCGGTTCGACCACCGGGTCCAACTACTACGTGCGCATTCTCTCCACCATTGACCGGGAGCTGCTGAAGCCGTCGGCCAGTGTCGCCCTGCACAAGCACAGCAATGCGCTGGTGGACGTTCTGCCACCGGAGGCGGACAGCTCCATCTCGATGCTGAATGCGGACGAAAAGCCGGACGTGCAGTACTCGGACATTGGTGGCATGGACATGCAGAAGCAGGAAATCCGCGAAGCCGTCGAACTGCCGCTGACACACTTCGAGCTGTACAAGCAGATCGGTATTGACCCACCGCGCGGTGTACTGATGTACGGGACCGCCCGGTTGCGGCAAGACAATGT] [+] EMBL BM612172 [CCGCCCACGCGTCCGCCCACGCGTCCGAAAAAATATTGAAAATGATTGACGCCGAGATGGTTATTCCTGATAAGGACGAGTCCGACACGCGAACAATGAAGGACGTTGTGAACCCGCTGGAAGAACCGCTGGAGGAGGATCTTTACATCAAATACAAGAAGCTGCAAAAGATGCTCGAGTTCCTGGAGGTGCAGGAAGAGTACATCAAGGATGAGCAGCGCAACCTGAAGAAGGAGTACCTGCACGCGCAGGAAGAGGTG ] consensusID : consensus_9585#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 662 fasta sequence [CGACCCACGCGTCCGCGGACGCGTGGGAGGTGACGCTGTTCTACGACCACGCGAACGGCACGCAGGTGAAGCAGAAGTGCAAGTTTGCACAGTTCAAAGATCCGGAAACGATTCCTGACCCGGTATTGGCCCATCTGGAAAATTTGGCCCCCCAGCTGCGCATGAAGCTCGGCGACCTGATCGACCTGATGGTGGATCTGGCCGAGTCCGTGCACGACGTCGAGTTCGTGCAGCAGGTGCTCGAGATTAACAACAACATCAACGAGCTGTCGGCAGATAATTAAGACAAAACATACAACAACCAAATATTGTGCATTTTTTCCCAACTTACTTACTTACAAACTATGATTCACACTAGCTCTAATATCTTACTAGCTTAATAGGAGAGCGCACCGACTCAAACTAATCGAACAATTTACTATTCACCAAGAAGTAACCACCAATCCGTGACACACCACCCTTTAATGGGCCCAATCGCTCATTAAGGGTTAAAGCACTTACTATTTTTGCTTGACCTTAGCATATCTACTTGACCACTTGTGTCTGACCGCGTGCGTAGTATTTGTTTTGATGTGTAATTCAAATTTTAAACTGTAACTTTTGTGTGTCGTACGAAAAACAAACAAAATTAATACGCGTGTTTTAAGCAACTTTTGTAACCC] [+] EMBL BM579471 [CGACCCACGCGTCCGCGGACGCGTGGGAGGTGACGCTGTTCTACGACCACGCGAACGGCACGCAGGTGAAGCAGAAGTGCAAGTTTGCACAGTTCAAAGATCCGGAAACGATTCCTGACCCGGTATTGGCCCATCTGGAAAATTTGGCCCCCCAGCTGCGCATGAAGCTCGGCGACCTGATCGACCTGATGGTGGATCTGGCCGAGTCCGTGCACGACGTCGAGTTCGTGCAGCAGGTGCTCGAGATTAACAACAACATCAACGAGCTGTCGGCAGATAATTAAGACAAAACATACAACAACCAAATATTGTGCATTTTTTCCCAACTTACTTACTTACAAACTATGATTCACACTAGCTCTAATATCTTACTAGCTTAATAGGAGAGCGCACCGACTCAAACTAATCGAACAATTTACTATTCACCAAGAAGTAACCACCAATCCGTGACACACCACCCTTTAATGGGCCCAATCGCTCATTAAGGGTTAAAGCACTTACTATTTTTGCTTGACCTTAGCATATCTACTTGACCACTTGTGTCTGACCGCGTGCGTAGTATTTGTTTTGATGTGTAATTCAAATTTTAAACTGTAACTTTTGTGTGTCGTACGAAAAACAAACAAAATTAATACGCGTGTTTTAAGCAACTTTTGTAACCC] consensusID : consensus_9585#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 362 fasta sequence [AATCTACCCTTTTTGTTTTACAGTTGTAGTTAACAGTTTAAACATTTAAAACACATTTATACGCAATATTGCTCTCTCTCTCTCTCTCTCTCTCTC---C-CTCTCTCTCTCTCTCTCTCTCTCTTGTATCTACTTCACGATCCCAATACGTTTCCCTAACCAAACCCAAAGCTACTTACCCCGATCGATACCCACAAATTCCCTACTCTTTATCAAAAATATATCTTCCATCTGAGATTTTTGGTTCCCGCACAACCTGCGCCTGTGTCACCGTTTTGTATAATCTTCCTTTTTTAGCTCTCTAATGCGCCCACGCTTTGTTTTGTTTTTTTTTTTTGTTGTAGGTCAATAATACGGACGAAAAT] [+] EMBL CNS08UUA [AATCTACCCTTTTTGTTTTACAGTTGTAGTTAACAGTTTAAACATTTAAAACACATTTATACGCAATATTGCTCTCTCTCTCTCTCTCTCTCTCTC C CTCTCTCTCTCTCTCTCTCTCTCTTGTATCTACTTCACGATCCCAATACGTTTCCCTAACCAAACCCAAAGCTACTTACCCCGATCGATACCCACAAATTCCCTACTCTTTATCAAAAATATATCTTCCATCTGAGATTTTTGGTTCCCGCACAACCTGCGCCTGTGTCACCGTTTTGTATAATCTTCCTTTTTTAGCTCTCTAATGCGCCCACGCTTTGTTTTGTTTTTTTTTTTTGTTGTAGGTCAATAATACGGACGAAAAT] [+] EMBL AGA283045 [ TACCCWTTTTGTTTTACAGTTGTAGTTAACAGTTTAAACATTTAAAACACATTTATACGCAATATTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTATCTACTTCACGATCCCAATACGTTTCCCTAACCAAACCCAAAGCTACTTACCCCGATCGATACCCACAAATTCCCTACTCTTTATCAAAAATATATCTTCCATCTGAGACTTTTGGT ] consensusID : consensus_9585#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 283 fasta sequence [TGCAAACCAACCGAATGTCGCCCCGCGGTCACGGCCAACGTGCAGAAGGGCAAGAACACCAAGATGCGCAAGGCCAACCGCGGGCAACTGGAGAACAACCAGAACCCGGAGAAGCCGCCCAACCACAACAAGGGCAACGTGGGCCTCGTGTGCACCAAGGGCGAACCGGCCGAGAACCGCGACAAGCAGACCGAGAGCAAGGTGCGAGCCCCGGCCCGTGCCGGTGCGAACGCCCCGCACGAGGTCGTCAACCCGGCCCAGAACACCGGTCACGGCCCGGAGA] [+] EMBL CNS08DT6 [TGCAAACCAACCGAATGTCGCCCCGCGGTCACGGCCAACGTGCAGAAGGGCAAGAACACCAAGATGCGCAAGGCCAACCGCGGGCAACTGGAGAACAACCAGAACCCGGAGAAGCCGCCCAACCACAACAAGGGCAACGTGGGCCTCGTGTGCACCAAGGGCGAACCGGCCGAGAACCGCGACAAGCAGACCGAGAGCAAGGTGCGAGCCCCGGCCCGTGCCGGTGCGAACGCCCCGCACGAGGTCGTCAACCCGGCCCAGAACACCGGTCACGGCCCGGAGA] consensusID : consensus_9585#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 243 fasta sequence [CTTCGGAAACGGTCAACAGGGNTGGAAACTTCCCGTTCTTCGGTTAAAGTGCTCGTCTAAGCTAAATATTATTTAAAATTGAAGATGGAACATCGATAGAGAAACCAAATTTNGTNGGAAAAAAAAAANGCTGGAANATTATNCANGCTTTTAACNATNCNGATATTATNCANGNGCNGNACTAAAATATNAATATGTGTNATGTGTGTGTGTTTGGGGGATATGNGAACGCNAAAAAAAAAA] [+] EMBL CF541920 [CTTCGGAAACGGTCAACAGGGNTGGAAACTTCCCGTTCTTCGGTTAAAGTGCTCGTCTAAGCTAAATATTATTTAAAATTGAAGATGGAACATCGATAGAGAAACCAAATTTNGTNGGAAAAAAAAAANGCTGGAANATTATNCANGCTTTTAACNATNCNGATATTATNCANGNGCNGNACTAAAATATNAATATGTGTNATGTGTGTGTGTTTGGGGGATATGNGAACGCNAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9585#2 ------------------------------------------------------------ consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 ------------------------------------------------------------ consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 GGATTTATGCCTCCGAACGGTTAAGGCCTCGACCGCGTGCTCCGCCGGGTTTTTCTTACA 60 consensus_9585#2 ----------CGACCCACGCGTCCGCGGACGCGTGGGAGGTGACGCTGTTCTACGACCAC 50 consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ---------------------------------------------------------AAT 3 consensus_9585#1 -------------------------------------------------CCGCCCACGCG 11 consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 GTTGCTAGCGTCACCAGACCAGATCCATCGAAAATGACCAAGAAGGCTGATCCCTATGGC 120 consensus_9585#2 GCGAACGGCACGCAGGTGAAGCAGAAGTGCAAGTTTGCACAGTTCAAAGATCCGGAAACG 110 consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 CTACCCTTTTTGTTTTACAGTTGTAGTTAACAGTTTAAACATTTAAAACACATTTATACG 63 consensus_9585#1 TCCGCCCACGCGTCCGAAAAAATAGTGAAAATGATTGACGCCGAGATGGTTATTCCTGAT 71 consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 TTCGCCAAGGATTTCCTGGCCGGTGGTATCTCTGCCGCTGTCTCGAAAACGGCCGTAGCA 180 consensus_9585#2 ATTCCTGACCCGGTATTGGCCCATCTGGAAAATTTGGCCCCCCAGCTGCGCATGAAGCTC 170 consensus_9585#5 --------------------------------------------------------CTTC 4 consensus_9585#3 CAATATTGCTCTCTCTCTCTCTCTCTCTC---TCTCCCTCTCTCTCTCTCTCTCTCTCTC 120 consensus_9585#1 AAGGACGAGTCCGACACGCGAACAATGAAGGACGTTGTGAACCCGCTGGAAGAACCGCTG 131 consensus_9585#4 ---------------------------TGCAAACCAACCGAATGTCGCCCCGCGGTCACG 33 consensus_9585#0 CCGATCGAACGCGTCAAGCTGCTGCTCCAGGTCCAGGCTGCCTCCAAGCAGATCGCCGTC 240 consensus_9585#2 GGCGACCTGATCGACC--TGATGGTGGA----TCTGGCCGAGTCCGTGCACGACG----- 219 consensus_9585#5 GGAAAC--GGTCAACA--GGGNTGGAAA----CTTCCCGTTCTTCGGTTAAAGTG----- 51 consensus_9585#3 TTGTATCTACTTCAC---GATCCCAATA----CGTTTCCCTAACCAAACCCAAAG----- 168 consensus_9585#1 GAGGAGGATCTTTACATCAAATACAAGA----AGCTGCAAAAGATGCTCGAGTTC----- 182 consensus_9585#4 GCCAACGTGCAGAAGGGCAAGAACACCA----AGATGCGCAAGGCCAACCGCGGG----- 84 consensus_9585#0 GACAAGCAGTACAAGGGTATCGTCGATTGCTTCGTTCAAGGATGTGTACAAACAGGTGTT 300 * * consensus_9585#2 -TCGAGTTCGTGCAGCAGGTGC-TCG-AGATTAACAAC--AACATCAACGAGCT-GTCGG 273 consensus_9585#5 -CTCGTCTAAGCTAAATATTAT-TTA-AAATTGAAGATGGAACATCGATAGA---GAAAC 105 consensus_9585#3 -CT-ACTTACCCCGATCGATAC-CCACAAATTCCCTACTCTTTATCAA---------AAA 216 consensus_9585#1 -CTGGAGGTGCAGGAAGAGTACATCAAGGATGAGCAGCGCAACCTGAAGAAGGA-GTACC 240 consensus_9585#4 -CAACTGGAGAACAACCAGAAC-CCGGAGA--AGCCGCCCAACCACAACAAG---GGCAA 137 consensus_9585#0 CCTCGGCGGCGTCGACAAGAACACCCAGTTCTGGCGCTACTTCCTGGGTAACCTCGGATC 360 consensus_9585#2 CAGATAATTAAGACAAAACATACAACAACCAAATATTGT-GCAT-TTT-TTCCCAACTTA 330 consensus_9585#5 CAAAT--TTNGTNGGAAAAAAAAAANGCTGGAANATTAT-NCANGCTT-TTAACNATNCN 161 consensus_9585#3 TATATCTTCCATCTGAGATTTTTGGTTCCCGCACAACCT-GCGCCTGT-GTCACCGTTTT 274 consensus_9585#1 TGCACGCGCAGGAAGAGGTGAAGCGCATCCAGTCGGTGCCGCTCGTAA-TTGGCCAGTTC 299 consensus_9585#4 CGTGGGCCTCGTGTGCACCAAGGGCGAACCGGCCGAGAA---CCGCGA-CAAGCAGACCG 193 consensus_9585#0 CGGCGGTGCCGCCGGTGCCACGTCGCTCTGCTTCGTGTACCCGCTCGACTTCGCCCGTAC 420 * consensus_9585#2 CTT--ACT-TACAAACTATG--ATTCACACTA-GCTCTA-ATATCTTACTA---GCTTAA 380 consensus_9585#5 GAT--ATTATNCANGNGCNG--NACTAAAATA-TNAATATGTGTNATGTGT---GTGTGT 213 consensus_9585#3 GTATAATCTTCCTTTTTTAG--CTCTCTAATG-CGCCCACGCTTTGTTTTG---TTTTTT 328 consensus_9585#1 CTGGAGGCGGTCGATCAGAA--CACCGGTAT--CGTCGGTTCGACCACCGG---GTCCAA 352 consensus_9585#4 AGAGCAAGGTGCGAGCCCCG--GCCCGTGCCGGTGCGAACGCCCCGCACGA---GGTCGT 248 consensus_9585#0 CCGTCTCGGTGCGAACGTTGGTCGCGGTGCCGGCGAGCGTGAGTTCAACGGTCTGCTCGA 480 * consensus_9585#2 TAGGAGAGCGCACCGACTCAAACTAATCGAACAATTTACTATTCACCAAGAAGTAACCAC 440 consensus_9585#5 TTGGGGGATATGNGAACGCNAAAAAAAAAA------------------------------ 243 consensus_9585#3 TTTTTTGTTGTAGGTCAATAATACGGACGAAAAT-------------------------- 362 consensus_9585#1 CTACTACGTGCGCATTCTCTCCACCATTGACCGGGAGCTGCTGAAGCCGTCGGCCAGTGT 412 consensus_9585#4 CAACCCGGCCCAGAACACCGGTCACGGCCCGGAGA------------------------- 283 consensus_9585#0 CTGTCTGAAGAAGACGGTCAAGTCGGACGGTATCATCGGTCTGTACCGTGGATTCAACGT 540 consensus_9585#2 CAATCCGTGACACACCACCCTTTAATGGGCCCAATCGCTCATTAAGGGTTAAAGCACTTA 500 consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 CGCCCTGCACAAGCACAGCAATGCGCTGGTGGACGTTCTGCCACCGGAGGCGGACAGCTC 472 consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 GTCCGTTCAGGGTATCATCATCTATCGTGCGGCCTACTTCGGTTGCTTCGATACTGCCAA 600 consensus_9585#2 CTATTTTTGCTTGACCTTAGCATATCTACTTGACCACTTGTGTCTGACCGCGTGCGTAGT 560 consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 CATCTCGATGCTGAATGCGGACGAAAAGCCGGACGTGCAGTACTCGGACATTGGTGGCAT 532 consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 GGGAATGCTGCCGGACCCGAAGAACACCTCCATCTTCGTCTCGTGGGCCATCGCACAGGT 660 consensus_9585#2 ATTTGTT-TTGATGTGTAATTCAAATTTTAAACTGTAACTTTTGTGTGTCGTACGAAAAA 619 consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 GGACATG-CAGAAGCAGGAAATCCGCGAAGCCGTCGAACTGCCGCTGACACACTTCGAGC 591 consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 GGTGACGACGGCTTCCGGTATTATTTCGTATCCTTTCGATACCGTCAGACGACGCATGAT 720 consensus_9585#2 CAAACAAAATTAATACGCGTGTTTTAAGCAACTTTTGTAACCC----------------- 662 consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 TGTACAAGCAGATCGGTATTGACCCACCGCGCGGTGTACTGATGTACGGGACCGCCCGGT 651 consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 GATGCAGTCTGGCCGTGCCAAGTCGGAGGTGATGTACAAGAACACGCTCGACTGCTGGGT 780 consensus_9585#2 ------------------------------------------------------------ consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 TGCGGCAAGACAATGT-------------------------------------------- 667 consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 CAAGATCGGCAAGCAGGAAGGTTCCGGCGCGTTCTTCAAGGGCGCTTTCTCGAACGTCCT 840 consensus_9585#2 ------------------------------------------------------------ consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 ------------------------------------------------------------ consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 GCGTGGTACTGGTGGCGCTCTGGTGCTCGTATTCTACGACGAAGTTAAGGCCCTGCTGGG 900 consensus_9585#2 ------------------------------------------------------------ consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 ------------------------------------------------------------ consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 TTAAGACGGGGAACAGCACGCACCTTAGTGTAATTAGTTATGTCCAGCCAGCCAGAACAG 960 consensus_9585#2 ------------------------------------------------------------ consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 ------------------------------------------------------------ consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 CAGCAGCAGCAGCAGTAACATCAACAACAACAACAACCATTATAATAACATCCAAATCAA 1020 consensus_9585#2 ------------------------------------------------------------ consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 ------------------------------------------------------------ consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 CACACACTTACCGGTAGCGATCGGCCTTGGGTGCTGGTGCTGATGGGATTGATACCCTTT 1080 consensus_9585#2 ------------------------------------------------------------ consensus_9585#5 ------------------------------------------------------------ consensus_9585#3 ------------------------------------------------------------ consensus_9585#1 ------------------------------------------------------------ consensus_9585#4 ------------------------------------------------------------ consensus_9585#0 GGCCACACAATCACAGCGATCGCCGCCAGTAAAAATGGTTATTTGCAAGACAAAATTAAC 1140 consensus_9585#2 ------------------ consensus_9585#5 ------------------ consensus_9585#3 ------------------ consensus_9585#1 ------------------ consensus_9585#4 ------------------ consensus_9585#0 TTTTTCAAAACCAATAAA 1158 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||