These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9598#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1128 fasta sequence [TGGGAAACTTCATGCGCAACCGGTAGATTTCTTGC-AAAACAGAAACAGAACAGGAATGCAAT-T-TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA-GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA-CTC-GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC-C-CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA-TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG-AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA-CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT-CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTGAGCTAATAATTAAA--AAAAAAAAAA] [+] EMBL CNS08PCP [TGGGAAACTTCATGCGCAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAATATATTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAGAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAGAAAACAGAGACTGATCGTGCC ] [+] EMBL CNS08UJM [ CATGCGCAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGAATGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTg ] [+] EMBL CNS08WTU [ aaaaaaaATGCGCAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTCTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACCTCGGGGCGTGTTTCGGCGCGAGGCCAGCGTGTATTAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCA ] [+] EMBL CNS08GXO [ ATGCGCAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGGACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATTTTTTACCGGAAGG ] [+] EMBL CNS08CYM [ CAACCGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTACGCGCGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCA ] [+] EMBL CNS08LF6 [ CGGTAGATTTCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTCCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAAAATCCCGAG ] [+] EMBL BM627204 [ ccgCTTGC AAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACACTTTCTCAAACGAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACT ] [+] EMBL CNS08KVN [ ggaTTGCAAAAACAGAAACAGAACAGGAATGCAAT T TTCGTTTCCAAGCATTCTAAAACATATTCTCAAACAAACGGCACGCTCTCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAATCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTCCATCGGTTCTGCAACGTGCACAGCTTCAGCAAGCCGAACGATCTGGACGCCCTGCAGCTGATGAACCTGGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTTAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTCCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATTTTTTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAA ] [-] EMBL CNS08CYN [ AGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGAA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTGAGCAAAAAATAAAA AAAAAAAAA ] [-] EMBL CNS08WTV [ AACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTTGCCGGCATGACGGTGCTGCA GGAGTCTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTGCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAAAAACGAACCGATCATCTACCGGAAGGGTCCCC TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTGAGCTATTAATTA ] [+] EMBL CNS0956D [ TGCAGCTGATGAACCTGGCCGGCATGACGGTGCTGCACGGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTTAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGACGGCCGATCGATTGCGGTGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CGACGGACGAGAACCTCCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCATTTTTCCTGC ] [-] EMBL CNS08KVO [ ATTGCCATCGGCTACGGCCAAAGCGACGAGAA CTC GTTCGTGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGCGCCAAAAAAAGCTGGTTAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGAAAGCGCATCTTCGACGGCCGATCGATTGCGATGCGCTATCCACCCTCCTTTGATGCCCGGGCCGTCCTCTAC C CCACGGACGAGAACCTCCGCGACTATCTCAGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAAAGAACTCACAGCAAATAAAGTCTCGATTGAGCTAATCGTTAAACGAAAAAAAAAA] [-] EMBL CNS08PCQ [ CCTCCTTTGATGCCCGGGCCGTCCTCTAC C CCACGGACGAGAACCTGCGCGACTATCTCGGCTGGCGGCAGGCGGACGTGCACGTGAACAATCTGTACAACACAACGTTCTGGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGTTCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATATCTGGATAt ] [-] EMBL CNS08LF7 [ CAATTTTTACAACACAACGTTTTTGAATTTGGTCGCTTCCGGGTTGAGCAATTCCGACGCGGAGAAGCGGCTGCAAGGGACGTTGGCGAGCGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAACAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCTACGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATAACTCTTGATTTA ] [-] EMBL CNS08UJN [ CCGTTCATCTACCGGAAGGGTACCA TTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAG AAAAAGAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCCCGAGATA CTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGCGCAACCCATCGTTCGGTATCAGCT CGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAAGGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGATTTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTGAGCTAATCGTTA ] consensusID : consensus_9598#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 822 fasta sequence [GCAGGTTAACTGTTCCTGCCAGCATGCGCAACCGGTAGATTTCTTGCAAAACAGAAACAGAACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCGTCAAACAAACTGGGACGCTCCCTAAACTCCAGGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGTGCAGGCAAAAGCTTACTCCCGAACAGCTGGATCGTGGTNGCGCATCGATTGGGCCAAAGGGCTTTCATCCGGTTCTTGCCAAGCGGTGCACAGCTTCNAGCAAAACCTGAACNGAGTCTGGATTTGCCCTGGAGCTTGCATTGAACCCTTGGCCGGCCATTTGACTGGGTGCTTGCAAGGAGGTTTAACGCATGGATNTGCCCATCGNGCTAACTGGGGCCAAAATGCCGGACGAAGTACTTACGGTTACCGTTGGTTACANCCGGNNTCGCCACGAANGNGACTGTAAGCNGTTGTAACNCAAAGACNTGCTCAGCCCCNGGGACCAACGCCTAGGGNTACNAGACTAAACGTAGGGACCCAAGGAGCCTTAGTGATNCAACCATACAGAGGGTCGTAAACCCATTTGTNTTCACCACAAGCNTTTGGNGAACAAAAGGACTGGCCGACATTCCTTGTTCACGAAAAGCTGAGTGTGCCCGGCAATTCGGGAACATATATGGGCCGGAAAATGGCCGGCCCNANATTTCCCCGGNGCCGATATNACCCCNATATNATNGNNACGGGCAACCACNNTGGGTGACCCGGATGNCACATATCTTAAAAACCCCCGTGAAAAGGTGGCACACCGCAAGAN] [+] EMBL AL696154 [GCAGGTTAACTGTTCCTGCCAGCATGCGCAACCGGTAGATTTCTTGCAAAACAGAAACAGAACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCGTCAAACAAACTGGGACGCTCCCTAAACTCCAGGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGTGCAGGCAAAAGCTTACTCCCGAACAGCTGGATCGTGGTNGCGCATCGATTGGGCCAAAGGGCTTTCATCCGGTTCTTGCCAAGCGGTGCACAGCTTCNAGCAAAACCTGAACNGAGTCTGGATTTGCCCTGGAGCTTGCATTGAACCCTTGGCCGGCCATTTGACTGGGTGCTTGCAAGGAGGTTTAACGCATGGATNTGCCCATCGNGCTAACTGGGGCCAAAATGCCGGACGAAGTACTTACGGTTACCGTTGGTTACANCCGGNNTCGCCACGAANGNGACTGTAAGCNGTTGTAACNCAAAGACNTGCTCAGCCCCNGGGACCAACGCCTAGGGNTACNAGACTAAACGTAGGGACCCAAGGAGCCTTAGTGATNCAACCATACAGAGGGTCGTAAACCCATTTGTNTTCACCACAAGCNTTTGGNGAACAAAAGGACTGGCCGACATTCCTTGTTCACGAAAAGCTGAGTGTGCCCGGCAATTCGGGAACATATATGGGCCGGAAAATGGCCGGCCCNANATTTCCCCGGNGCCGATATNACCCCNATATNATNGNNACGGGCAACCACNNTGGGTGACCCGGATGNCACATATCTTAAAAACCCCCGTGAAAAGGTGGCACACCGCAAGAN] consensusID : consensus_9598#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence [TCAGGCAGAATCCCCCGAGGTTATTTCTTGCAAAACAGAAACAGAACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCTCAAACAAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTGGCGGCATGACGGTGCTGCAGNGAGTTTAACCGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACTCGTACGCNGTTTCGGCGCGAGGCGAGCGTGTACCAGAGGCCGCCGNGACAAGCCTGGTCAGCTACGTGGCCAGCCTGTACACCTCGGNCGTACATGTCCACTGGAAGCGCATCTTCGACANGCCGATCGATTGCCGACTGACGCTATCCGCGCTTNCCTTTATGAACAGACACCCGNGGGCCGNANCTACTTAGCNCGACAGGAACGGAAGAACCCTCGCGACGAACTAATACTACAANAAAGGAAAGAGAAAAGAGGGACNTAGCCACACGTGAGAACAAAGACCTGTACGNAAGCACAACAATACCAG] [+] EMBL AL696400 [TCAGGCAGAATCCCCCGAGGTTATTTCTTGCAAAACAGAAACAGAACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCTCAAACAAACGGCACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTGGCGGCATGACGGTGCTGCAGNGAGTTTAACCGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACTCGTACGCNGTTTCGGCGCGAGGCGAGCGTGTACCAGAGGCCGCCGNGACAAGCCTGGTCAGCTACGTGGCCAGCCTGTACACCTCGGNCGTACATGTCCACTGGAAGCGCATCTTCGACANGCCGATCGATTGCCGACTGACGCTATCCGCGCTTNCCTTTATGAACAGACACCCGNGGGCCGNANCTACTTAGCNCGACAGGAACGGAAGAACCCTCGCGACGAACTAATACTACAANAAAGGAAAGAGAAAAGAGGGACNTAGCCACACGTGAGAACAAAGACCTGTACGNAAGCACAACAATACCAG] consensusID : consensus_9598#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 647 fasta sequence [GAATCCCCCGNGGTTTTTCAAGCATTCTAAAACATATTCTCAACAAACGGTACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTGGCCGGCATGACGGTGCTGCAGGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACTCGTTCGTGTTTCGGCGCGAGGCGAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGAAGTCCGATCGATTGCGATGCGCTATCCGCTTCCTTTGACAGCCCGGGCGTCCTCTAACCGACGGACGAGAACCTGCGCGACTATCTCAGNTGGCGGCAGGCGGACGTGCACGTGAACAACCTGTACAACACAACATTCTTGGGAAACTTTGGTCGCTTCCGGGTTGAGCAATTCGCACCGCGGAGAAGCGGCTGCCAAGGGACGTTGGCGGAGCGATCACCGAA] [+] EMBL AL694931 [GAATCCCCCGNGGTTTTTCAAGCATTCTAAAACATATTCTCAACAAACGGTACGCTCCCTACACTCCAGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGAGCAGGAGGAAAAGCTACTCCCGAACAGCTGGATCGTGGTGCGCATCGATGGCAAAGGCTTTCATCGGTTCTGCAACGTGCACAGCTTCAGCAAACCGAACGATCTGGATGCCCTGCAGCTGATGAACCTGGCCGGCATGACGGTGCTGCAGGAGTTTAACGAGATTGCCATCGGCTACGGCCAAAGCGACGAGTACTCGTTCGTGTTTCGGCGCGAGGCGAGCGTGTACCAGCGGCGCCGGGACAAGCTGGTCAGCTACGTGGCCAGCCTGTTCACCTCGGCGTACATGTTCCACTGGAAGCGCATCTTCGAAGTCCGATCGATTGCGATGCGCTATCCGCTTCCTTTGACAGCCCGGGCGTCCTCTAACCGACGGACGAGAACCTGCGCGACTATCTCAGNTGGCGGCAGGCGGACGTGCACGTGAACAACCTGTACAACACAACATTCTTGGGAAACTTTGGTCGCTTCCGGGTTGAGCAATTCGCACCGCGGAGAAGCGGCTGCCAAGGGACGTTGGCGGAGCGATCACCGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9598#0 ------------TGGGAAACTTCATGCGCAACCGGTAGATTTCTTGCAAAACAGAAACAG 48 consensus_9598#3 ------------------------------------------------------------ consensus_9598#2 ----------------TCAGGCAGAATCCCCCGAGGTTATTTCTTGCAAAACAGAAACAG 44 consensus_9598#1 GCAGGTTAACTGTTCCTGCCAGCATGCGCAACCGGTAGATTTCTTGCAAAACAGAAACAG 60 consensus_9598#0 AACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACACTTTC-TCAAACGAAC-GGCA 106 consensus_9598#3 -----GAATCCCCCGNGGTTTTTCAAGCATTCTAAAACATATTC-TCAA-CAAAC-GGTA 52 consensus_9598#2 AACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTC-TCAAACAAAC-GGCA 102 consensus_9598#1 AACAGGAATGCAATTTTCGTTTCCAAGCATTCTAAAACATATTCGTCAAACAAACTGGGA 120 **** * *** **************** *** **** * *** ** * consensus_9598#0 CGCTCCCTACACTCCAG-CACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGA 165 consensus_9598#3 CGCTCCCTACACTCCAG-CACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGA 111 consensus_9598#2 CGCTCCCTACACTCCAG-CACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGA 161 consensus_9598#1 CGCTCCCTAAACTCCAGGCACGATGGCGCTGAGCCGCTTCGAGTACGTGAAGCAGTTCGA 180 ********* ******* ****************************************** consensus_9598#0 GCAG---GAGGAAAAGCT-ACTCCCGAACAGCTGGATCGTGGTG-CGCATCGAT--GGC- 217 consensus_9598#3 GCAG---GAGGAAAAGCT-ACTCCCGAACAGCTGGATCGTGGTG-CGCATCGAT--GGC- 163 consensus_9598#2 GCAG---GAGGAAAAGCT-ACTCCCGAACAGCTGGATCGTGGTG-CGCATCGAT--GGC- 213 consensus_9598#1 GCAGTGCAGGCAAAAGCTTACTCCCGAACAGCTGGATCGTGGTNGCGCATCGATTGGGCC 240 **** * ******* ************************ ********* *** consensus_9598#0 -AAAGGCTTTCATC-GGTTCT-GCAACG---TGCACAGCTTCA-GCAAA--CCGAACGA- 267 consensus_9598#3 -AAAGGCTTTCATC-GGTTCT-GCAACG---TGCACAGCTTCA-GCAAA--CCGAACGA- 213 consensus_9598#2 -AAAGGCTTTCATC-GGTTCT-GCAACG---TGCACAGCTTCA-GCAAA--CCGAACGA- 263 consensus_9598#1 AAAGGGCTTTCATCCGGTTCTTGCCAAGCGGTGCACAGCTTCNAGCAAAACCTGAACNGA 300 ** ********** ****** ** * * *********** ***** * **** consensus_9598#0 -TCTGGAT--GCCCTGCAGCTGA---TGAACC--TTGCCGGCA---TGAC--GGTGCT-G 313 consensus_9598#3 -TCTGGAT--GCCCTGCAGCTGA---TGAACC--TGGCCGGCA---TGAC--GGTGCT-G 259 consensus_9598#2 -TCTGGAT--GCCCTGCAGCTGA---TGAACC--TGGC-GGCA---TGAC--GGTGCT-G 308 consensus_9598#1 GTCTGGATTTGCCCTGGAGCTTGCATTGAACCCTTGGCCGGCCATTTGACTGGGTGCTTG 360 ******* ****** **** ****** * ** *** **** ****** * consensus_9598#0 CAGG--AGTTTAAC-----GAGATTGCCATCGG-----CTACGGCCAAAGCGACG----- 356 consensus_9598#3 CAGG--AGTTTAAC-----GAGATTGCCATCGG-----CTACGGCCAAAGCGACG----- 302 consensus_9598#2 CAGNG-AGTTTAACC----GAGATTGCCATCGG-----CTACGGCCAAAGCGACG----- 353 consensus_9598#1 CAAGGAGGTTTAACGCATGGATNTGCCCATCGNGCTAACTGGGGCCAAAATGCCGGACGA 420 ** ******* ** * ****** ** ******* * ** consensus_9598#0 AGTACTCGTTCG-TGTTTCGGCGCGAGGCCAGCGTGTACCAGCGGC-GCCGGGACAAGC- 413 consensus_9598#3 AGTACTCGTTCG-TGTTTCGGCGCGAGGCGAGCGTGTACCAGCGGC-GCCGGGACAAGC- 359 consensus_9598#2 AGTACTCGTACGCNGTTTCGGCGCGAGGCGAGCGTGTACCAGAGGCCGCCGNGACAAGCC 413 consensus_9598#1 AGTACTTACGGTTACCGTTGGTTACANCCGGNNTCGCCACGAANGNGACTGTAAGCNGTT 480 ****** * ** * * * * * * * * * consensus_9598#0 --TGGTCAGCTACGTGGCCAGCCTGTTCACCT--CGGC-GTACATGTTCCACTGGAAGCG 468 consensus_9598#3 --TGGTCAGCTACGTGGCCAGCCTGTTCACCT--CGGC-GTACATGTTCCACTGGAAGCG 414 consensus_9598#2 --TGGTCAGCTACGTGGCCAGCCTGTACACCT--CGGNCGTACATGT-CCACTGGAAGCG 468 consensus_9598#1 GTAACNCAAAGACNTGCTCAGCCCCNGGGACCAACGCCTAGGGNTACNAGACTAAACGTA 540 ** ** ** ***** * ** * *** * * consensus_9598#0 CATCTTCGA-CGGCCGATCGATTGC-GAT--GC-GCTATCCAC-CCTCCTTTGATGCCCG 522 consensus_9598#3 CATCTTCGA-AGTCCGATCGATTGC-GAT--GC-GCTATCCGC-T-TCCTTTGACAGCCC 467 consensus_9598#2 CATCTTCGACANGCCGATCGATTGCCGACTGAC-GCTATCCGCGCTTNCCTTTATGAACA 527 consensus_9598#1 GGGACCCAAGGAGCCTTAGTGATNCAACCATACAGAGGGTCGTAAACCCATTTGTNTTCA 600 * * ** * * * * * * ** * consensus_9598#0 GGCCGTCCTCTACCCGACGGACGAGA-ACCTGCGCGACTATCTCAGCTGGCGGCAGGC-G 580 consensus_9598#3 GGGCGTCCTCTAACCGACGGACGAGA-ACCTGCGCGACTATCTCAGNTGGCGGCAGGC-G 525 consensus_9598#2 GA--------CACCCGNGGGCCGN---ANCTAC----TTAGCNCGACAGG-AACGGAA-G 570 consensus_9598#1 CCACA---AGCNTTTGGNGAACAAAAGGACTGGCCGACATTCCTTGTTCACGAAAAGCTG 657 * * * ** * * consensus_9598#0 GACGTGCACG-T-------GAACA-ATCTGTACAACACAACGTTCT--GGAA--TTTGGT 627 consensus_9598#3 GACGTGCACG-T-------GAACA-ACCTGTACAACACAACATTCTTGGGAAACTTTGGT 576 consensus_9598#2 AACCCTCGCGAC-------GAACT-AATACTACAANAAAGGAAAGAGAAAAGAGGGACNT 622 consensus_9598#1 AGTGTGCCCGGCAATTCGGGAACATATATGGGCCGGAAAATGGCCGGCCCNANATTTCCC 717 * ** **** * * * * consensus_9598#0 CGCTTCCGGGTTGAGCAATTC-CGACGCGGAGAAGCGGCTGC-AAGGGACGTTGGCG-AG 684 consensus_9598#3 CGCTTCCGGGTTGAGCAATTCGCACCGCGGAGAAGCGGCTGCCAAGGGACGTTGGCGGAG 636 consensus_9598#2 AGCCACACGTGAGAACAAAGACCTGTACGNAAGCACAACAATACCAG------------- 669 consensus_9598#1 CGGNGCCGATATNACCCCNATATNATNGNNACGGGCAACCACNNTGGGTGACCCGGATGN 777 * * * * * * * * consensus_9598#0 CGATAAGAATGAAATCCTTTTCTCCCAGTTCGGCATCAACTACAACAACGAACCGATCAT 744 consensus_9598#3 CGATCAC--CGAA----------------------------------------------- 647 consensus_9598#2 ------------------------------------------------------------ consensus_9598#1 CACATATCTTAAAAACCCCCGTGAAAAGGTGGCACACCGCAAGAN--------------- 822 consensus_9598#0 CTACCGGAAGGGTACCATTTTGCTGCCCAAAAGCGTCGTGTCCAGCGAGGGCAAGAAACA 804 consensus_9598#3 ------------------------------------------------------------ consensus_9598#2 ------------------------------------------------------------ consensus_9598#1 ------------------------------------------------------------ consensus_9598#0 GAGACTGATCGTGCCCATCTTTGAGGATCTGATAAGCGACGCATTTTGGGCGAAACATCC 864 consensus_9598#3 ------------------------------------------------------------ consensus_9598#2 ------------------------------------------------------------ consensus_9598#1 ------------------------------------------------------------ consensus_9598#0 CGAGATACTGGATAAGAAGGCAAAAACGGATGAGCTGTACGATTTGGGAGAAAACGAGGC 924 consensus_9598#3 ------------------------------------------------------------ consensus_9598#2 ------------------------------------------------------------ consensus_9598#1 ------------------------------------------------------------ consensus_9598#0 GCAACCCATCGTTCGGTATCAGCTCGAGGTGCAGGAACGGCGTAAGGCAGGCATGAACAA 984 consensus_9598#3 ------------------------------------------------------------ consensus_9598#2 ------------------------------------------------------------ consensus_9598#1 ------------------------------------------------------------ consensus_9598#0 GGCGGAGACGGGCAACCGTTTGCTTGCAACTGACCATAGCTAACACTAATGACTCTTGAT 1044 consensus_9598#3 ------------------------------------------------------------ consensus_9598#2 ------------------------------------------------------------ consensus_9598#1 ------------------------------------------------------------ consensus_9598#0 TTATTATATAGCCTAAAAAAACACGCTAAAACGAACTAACAGCAAATAAAGTCTCGATTG 1104 consensus_9598#3 ------------------------------------------------------------ consensus_9598#2 ------------------------------------------------------------ consensus_9598#1 ------------------------------------------------------------ consensus_9598#0 AGCTAATAATTAAAAAAAAAAAAA 1128 consensus_9598#3 ------------------------ consensus_9598#2 ------------------------ consensus_9598#1 ------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||